Cmc11g0303631 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0303631
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	NAD(P)H-quinone oxidoreductase subunit N
Location	CMiso1.1chr11: 25118638 .. 25121451 (-)
RNA-Seq Expression	Cmc11g0303631
Synteny	Cmc11g0303631

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCAGCTCTAAAAGGTAAACATATAAAAAAGGAAAAGCAAAACCAAAGAGATGAGTTTCATCTCCATTTTCATCCACACAAAACCTCAACAATGGCATCTCCACGACTTCCACCTCCTCTTAATTCCCAATCCAATTCCTCATCCATGGCCTTCTTTCTTTCTCCTAACCTCATTCTTCCTTCTACATTCTATATCTCTTTCAAAAAACCCCTACCATGGCCCCTGTAGCCTCCATGTTCAACGGAGCACCCCTCGCGCCACCGCTCCATCTTCACTCAAGTCGCCACCATCCACTCACCTCGCCGGCGATGGTGCCGATTAACAATCGACGGTCGAGTTTCCGTCCCGGCAATGGCAGAGCCGCAACGGTGAGATGCGAGGGAATCGGAATTGGCGATTTCATCGGTGGCGACTTGCTTAAATTCGACCTAGGGCAATGGTTATCGGATGTGGAGGAACACAAAGCTTTAGCAATTTACTCACCGCATGAAGGCGGATACGAAGGCCGATACCTAAACCGCCTCCGTTACCAAGGCTATTACTTCCTCGATCTGTCTGCTCGCGGTCTCGGCGATCCTGAGACCACTCTCACCAAGATTCACCCTGTTTGCCCTGTCCGTTGAATCGAATCCTTACGGCTCATTCCATTTGATTAGTTTTATTTTTTTTCTCAGGTTTTGTTCGGTTGTTGTTCTTACTTTTTGGGGTTCGAAATGCAGGCTCATTTGGGGAAGCAGCCGATTGCACGGTGGTATTTTCCGCCGGAAGTTGATTACAGGCTGGCGGCACTGCCTCCGAACGCTAAGGGACTGGTCGTGTGGATAATCGAGGCTAAGGTGAGATTATTTGAACTGCATGCCATTAGATTAAACGGTTCAGAAAGAGGTAGTTTGAGAAAAAATGGATAACCGAATTGGAAACATTGATCAGGTTCTTTCCAAGGCGGAGTTGCAGTTCCTTGCTTTGCTGCCGACTCTCCGGCCGAAAGTCCGAGTCATCGCCGAGTGCGGGAATTGGTACGTTTCTTCGTTGGTCTAATTGTCCACTTCGGAATAAAGTGAAGTACAATGTGCAATACATAGTTTTATAAATTTTGTTCCAAAGTTAGAAAATTACCGTTCTTTTATCTTTTTCCTTCCAATTCTTTAGTTGGTCGAGAGGCTTTCAATTTTTTAGTTGGTCAGGAGGCTTAAAAGTATTTTCAAACAAGATTATTATACTTGATAAAAACATCCAAATAACATTTACCAAATATATTGATTTTCAATATAATCTCTATTAATATGTATGAAAATTTTTATAAATATTTTGGCTCATTTTTATTATATATGTAAATGCATCTACTTTGATCCTTCGTAAAGTTTTAACAAATAAATTTTGATGGAAGTTGAGATACTTTGAGGTCACCAACCTCAAGATTTCAATTTAAGAACAATATTTTGAAATGGAAAGTTTATGGCATGTTTAGAAACTTGGCCTTATTTTTGTTTGAACTTGAGAAATGATTGGTGTGAGATAACTATGGGGAAGAAGAAGATATCGTGTCCATTTGGATGAGGTTTCTAATCGGATATTTGAGGCGAGAAGTTGGTTATTATAATCATAGGTTATTATAGAGTTGGGTTATGATAGTTTGTGTTTAAGAGAGTAGACTATTGTAATTTGGATAATAATACTATGTATTTAATCTGTAAATTATTTTAGTTTGAGAAGAAAATAGTAAAAATTGTAATAAATAATAAGAATACGATGAAGGTGAAATAGTAAAAAAGTACCAAATAGTAAATAATATAGCAAATGAGAAGCTTTGAAATAATATTAAATGTAGTTAATTGAGAAGTACAAAATCGAATTTACTATAGCAAAAGACGATTGCTATAGTATTTGAGACTCATTGTCCCAAACATCTCCTAAATATTTATAATCGCTTAAAACTCAAAAGAACATAGGTCTACGATAATTAGCCAATGAACATAGATCAATAATGATGAACATGTACTAATATATAGTCCTCCTTTCAAAGTTTTGGGAGTTAAAATCTTAACCATCATTATATTCAGAAGAAGAGAGAAAAAAAATGGGGGTGGAGTAGGTGTTCAACTGTTTTGCCTACGTTTGTTTGCGAAATGATTTGAATATTGGGTATTAAGATTTGTAATGGTCCTTAGTCAGGAGCATGGTGATTTTTAAATAAGGGAAGCCTTTGGAAAAAATTCTTTATAGAAAAGCAAACAAAGAAATTAATCTGAAGGAATTCTTTTATTTATGAGGTCTTCTCGATATATATTAACATATTATTTTAGATTAACATAATATTATATCTTAAAACTAATCGACAATGAGATTCTCTTCCTCTCCCACATAAATATTATGTAAAGATTATGTCTTGTATGGATGAGTAACTCAAATATGTTATATAATGATTATAAGGTTTGTTACTTTCTAACGTGAGATACTCAGAATGGGAAGATTGACTTTGTTTTTGTAGGAGAAAATTCATGTGGAAACCGCTTAAGGAGATTGCAGGAGCTTGAAGACGCTTGTTGATGACCGGAAGAATAGAAGATTAATTCCTCCCTAAACATGAAGAATACAGTTTTTTTTTTTTTTTTTTTTTAAATCTCAAGTTATTAACTCAAAATTATTGGTTAAATAGTTAAGCAGTGCACATTCCACCACTCCCCAAATTGAAAAGGAAGAAAATTAGTATTATTTAGAGTAAATTGCAAATAATTTTATTGTACTTTCATGCAATTATTATTACCTCAAAGAATGGCTTCCTTGGTGTCCAACTTTCTTTTGAGCTTTTAGT

mRNA sequence

TGTCAGCTCTAAAAGGTAAACATATAAAAAAGGAAAAGCAAAACCAAAGAGATGAGTTTCATCTCCATTTTCATCCACACAAAACCTCAACAATGGCATCTCCACGACTTCCACCTCCTCTTAATTCCCAATCCAATTCCTCATCCATGGCCTTCTTTCTTTCTCCTAACCTCATTCTTCCTTCTACATTCTATATCTCTTTCAAAAAACCCCTACCATGGCCCCTGTAGCCTCCATGTTCAACGGAGCACCCCTCGCGCCACCGCTCCATCTTCACTCAAGTCGCCACCATCCACTCACCTCGCCGGCGATGGTGCCGATTAACAATCGACGGTCGAGTTTCCGTCCCGGCAATGGCAGAGCCGCAACGGTGAGATGCGAGGGAATCGGAATTGGCGATTTCATCGGTGGCGACTTGCTTAAATTCGACCTAGGGCAATGGTTATCGGATGTGGAGGAACACAAAGCTTTAGCAATTTACTCACCGCATGAAGGCGGATACGAAGGCCGATACCTAAACCGCCTCCGTTACCAAGGCTATTACTTCCTCGATCTGTCTGCTCGCGGTCTCGGCGATCCTGAGACCACTCTCACCAAGATTCACCCTGTTTGCCCTGCTCATTTGGGGAAGCAGCCGATTGCACGGTGGTATTTTCCGCCGGAAGTTGATTACAGGCTGGCGGCACTGCCTCCGAACGCTAAGGGACTGGTCGTGTGGATAATCGAGGCTAAGGTTCTTTCCAAGGCGGAGTTGCAGTTCCTTGCTTTGCTGCCGACTCTCCGGCCGAAAGTCCGAGTCATCGCCGAGTGCGGGAATTGGAGAAAATTCATGTGGAAACCGCTTAAGGAGATTGCAGGAGCTTGAAGACGCTTGTTGATGACCGGAAGAATAGAAGATTAATTCCTCCCTAAACATGAAGAATACAGTTTTTTTTTTTTTTTTTTTTTAAATCTCAAGTTATTAACTCAAAATTATTGGTTAAATAGTTAAGCAGTGCACATTCCACCACTCCCCAAATTGAAAAGGAAGAAAATTAGTATTATTTAGAGTAAATTGCAAATAATTTTATTGTACTTTCATGCAATTATTATTACCTCAAAGAATGGCTTCCTTGGTGTCCAACTTTCTTTTGAGCTTTTAGT

Coding sequence (CDS)

ATGGCCCCTGTAGCCTCCATGTTCAACGGAGCACCCCTCGCGCCACCGCTCCATCTTCACTCAAGTCGCCACCATCCACTCACCTCGCCGGCGATGGTGCCGATTAACAATCGACGGTCGAGTTTCCGTCCCGGCAATGGCAGAGCCGCAACGGTGAGATGCGAGGGAATCGGAATTGGCGATTTCATCGGTGGCGACTTGCTTAAATTCGACCTAGGGCAATGGTTATCGGATGTGGAGGAACACAAAGCTTTAGCAATTTACTCACCGCATGAAGGCGGATACGAAGGCCGATACCTAAACCGCCTCCGTTACCAAGGCTATTACTTCCTCGATCTGTCTGCTCGCGGTCTCGGCGATCCTGAGACCACTCTCACCAAGATTCACCCTGTTTGCCCTGCTCATTTGGGGAAGCAGCCGATTGCACGGTGGTATTTTCCGCCGGAAGTTGATTACAGGCTGGCGGCACTGCCTCCGAACGCTAAGGGACTGGTCGTGTGGATAATCGAGGCTAAGGTTCTTTCCAAGGCGGAGTTGCAGTTCCTTGCTTTGCTGCCGACTCTCCGGCCGAAAGTCCGAGTCATCGCCGAGTGCGGGAATTGGAGAAAATTCATGTGGAAACCGCTTAAGGAGATTGCAGGAGCTTGA

Protein sequence

MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA

Homology

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BLAST of Cmc11g0303631 vs. NCBI nr
Match: XP_008456262.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis melo])

HSP 1 Score: 451.8 bits (1161), Expect = 3.2e-123
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60
           MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG
Sbjct: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 216
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 215

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BLAST of Cmc11g0303631 vs. NCBI nr
Match: XP_004139925.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis sativus] >KGN46772.1 hypothetical protein Csa_020955 [Cucumis sativus])

HSP 1 Score: 445.7 bits (1145), Expect = 2.3e-121
Identity = 211/215 (98.14%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60
           MAP+ASMFNGAPLAPPLH HSSRHHPLTSPAM+PINNRRSS RPGNGRAATVRCEGIGIG
Sbjct: 1   MAPLASMFNGAPLAPPLHFHSSRHHPLTSPAMLPINNRRSSLRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 216
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 215

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BLAST of Cmc11g0303631 vs. NCBI nr
Match: KAA0033539.1 (NAD(P)H-quinone oxidoreductase subunit N [Cucumis melo var. makuwa] >TYJ95648.1 NAD(P)H-quinone oxidoreductase subunit N [Cucumis melo var. makuwa])

HSP 1 Score: 421.8 bits (1083), Expect = 3.6e-114
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60
           MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG
Sbjct: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNW 202
           FLALLPTLRPKVRVIAECGNW
Sbjct: 181 FLALLPTLRPKVRVIAECGNW 201

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BLAST of Cmc11g0303631 vs. NCBI nr
Match: XP_038900583.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Benincasa hispida])

HSP 1 Score: 404.4 bits (1038), Expect = 5.9e-109
Identity = 196/215 (91.16%), Postives = 198/215 (92.09%), Query Frame = 0


Query: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60
           MAPVASM NGA LAPPL L     HP T P  VP++ RRSSF   NGRAATVRCEGIGIG
Sbjct: 1   MAPVASMLNGAALAPPLRLQPRLQHPRTLPFTVPMSVRRSSFAARNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 216
           FLALLPTLRP VRVIAECGNWRKFMWKPLKEIAGA
Sbjct: 181 FLALLPTLRPNVRVIAECGNWRKFMWKPLKEIAGA 215

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BLAST of Cmc11g0303631 vs. NCBI nr
Match: XP_023007243.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita maxima])

HSP 1 Score: 401.7 bits (1031), Expect = 3.9e-108
Identity = 193/214 (90.19%), Postives = 197/214 (92.06%), Query Frame = 0


Query: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60
           M P+ASM NGA LAP LHLH  R  PLTSPA + +  RR+ F  G GRAATVRCEGIGIG
Sbjct: 1   MPPLASMLNGAALAPSLHLHPRRLRPLTSPATLQVIGRRTRFGTGKGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 215
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 214

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BLAST of Cmc11g0303631 vs. ExPASy Swiss-Prot
Match: Q9LVM2 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhN PE=2 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.0e-79
Identity = 139/177 (78.53%), Postives = 156/177 (88.14%), Query Frame = 0


Query: 37  NRRSSFRPGNGRAATVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYE 96
           N RS  R    R+  V+C    I D+IGGDL+K D+GQWL DVEEHKA+AIY+PHEGGYE
Sbjct: 33  NTRSKRR----RSTGVKCS--SIADYIGGDLVKPDIGQWLQDVEEHKAIAIYAPHEGGYE 92

Query: 97  GRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAA 156
           GRYLNRL+ QGYYFLD+SARGLGDPETTL K +PVCPAHLGKQPIARWY+PPEVDYRLAA
Sbjct: 93  GRYLNRLKMQGYYFLDISARGLGDPETTLLKNYPVCPAHLGKQPIARWYYPPEVDYRLAA 152

Query: 157 LPPNAKGLVVWIIEAKVLSKAELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIA 214
           LPP+AKGLVVW++EAKVLSK+ELQFLALLP+LRP VRVIAECGNWRKF+WKPL EIA
Sbjct: 153 LPPSAKGLVVWVLEAKVLSKSELQFLALLPSLRPNVRVIAECGNWRKFVWKPLAEIA 203

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BLAST of Cmc11g0303631 vs. ExPASy Swiss-Prot
Match: B8HUU1 (NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=ndhN PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.5e-35
Identity = 72/149 (48.32%), Postives = 99/149 (66.44%), Query Frame = 0


Query: 74  QWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCP 133
           Q++ D+E+  AL IY P EGG+EGRY  RLR  GY  L +SA GLGD  + LT++H V P
Sbjct: 9   QFIQDLEKSGALGIYVPSEGGFEGRYQRRLRAAGYSTLHISAPGLGDLPSYLTQVHGVRP 68

Query: 134 AHLGKQP-------IARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQFLALLP 193
            HLGK         +  ++ PP V+Y L  LPP A+GLV+W+I+ K LS+ EL +L++LP
Sbjct: 69  PHLGKSTQGNTDWGVKTFFLPPLVNYHLENLPPKARGLVLWMIDGKRLSRQELAYLSILP 128

Query: 194 TLRPKVRVIAECGNWRKFMWKPLKEIAGA 216
              PKV+++ E G  R+F W+PLKE+A A
Sbjct: 129 AQEPKVKIVIELGGDRQFRWQPLKEMAAA 157

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BLAST of Cmc11g0303631 vs. ExPASy Swiss-Prot
Match: B7JYJ3 (NAD(P)H-quinone oxidoreductase subunit N OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=ndhN PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.2e-33
Identity = 68/141 (48.23%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 79  VEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGK 138
           +E+  +LA+Y+P EGG+EGRY  RLR  GY+   L+ARGLGD    L  +H V P HLGK
Sbjct: 14  LEKSGSLAVYAPLEGGFEGRYQRRLRTNGYHTFSLTARGLGDVSAYLMGVHGVRPPHLGK 73

Query: 139 QPIAR-------WYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQFLALLPTLRPK 198
           + I +       ++ PP   Y+L  LPP +KGLV+WI+E  +LS+ EL++LA LPTL P+
Sbjct: 74  KNIGQEAAVGPVYFVPPIAAYQLETLPPKSKGLVLWILEGFILSQTELEYLANLPTLEPR 133

Query: 199 VRVIAECGNWRKFMWKPLKEI 213
           ++V+ E G  R F WKPL E+
Sbjct: 134 LKVVIELGGERYFSWKPLPEV 154

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BLAST of Cmc11g0303631 vs. ExPASy Swiss-Prot
Match: Q31L05 (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=ndhN PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-32
Identity = 74/149 (49.66%), Postives = 91/149 (61.07%), Query Frame = 0


Query: 74  QWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCP 133
           ++L  +E+  ALA+Y+P EGGYEGRYL RLR +GY  L  SARGLGDP   L  IH V P
Sbjct: 9   KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRP 68

Query: 134 AHLGKQPIAR-------WYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQFLALLP 193
            HLGKQ I          Y  P V Y L  LP NAKGLV+W++E  VLS  EL +   LP
Sbjct: 69  PHLGKQTIGNEAAVGRVEYVLPLVGYPLQNLPANAKGLVLWLLEGHVLSPQELSYFVTLP 128

Query: 194 TLRPKVRVIAECGNWRKFMWKPLKEIAGA 216
              P+++V+ E G  R F W+PL  +A A
Sbjct: 129 QAEPRLKVVIEMGGDRGFSWQPLAAVAEA 157

[Close]

BLAST of Cmc11g0303631 vs. ExPASy Swiss-Prot
Match: Q5N0W6 (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=ndhN PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-32
Identity = 74/149 (49.66%), Postives = 91/149 (61.07%), Query Frame = 0


Query: 74  QWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCP 133
           ++L  +E+  ALA+Y+P EGGYEGRYL RLR +GY  L  SARGLGDP   L  IH V P
Sbjct: 9   KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRP 68

Query: 134 AHLGKQPIAR-------WYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQFLALLP 193
            HLGKQ I          Y  P V Y L  LP NAKGLV+W++E  VLS  EL +   LP
Sbjct: 69  PHLGKQTIGNEAAVGRVEYVLPLVGYPLQNLPANAKGLVLWLLEGHVLSPQELSYFVTLP 128

Query: 194 TLRPKVRVIAECGNWRKFMWKPLKEIAGA 216
              P+++V+ E G  R F W+PL  +A A
Sbjct: 129 QAEPRLKVVIEMGGDRGFSWQPLAAVAEA 157

[Close]

BLAST of Cmc11g0303631 vs. ExPASy TrEMBL
Match: A0A1S3C430 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496258 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.6e-123
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60
           MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG
Sbjct: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 216
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 215

[Close]

BLAST of Cmc11g0303631 vs. ExPASy TrEMBL
Match: A0A0A0KEC3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133810 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.1e-121
Identity = 211/215 (98.14%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60
           MAP+ASMFNGAPLAPPLH HSSRHHPLTSPAM+PINNRRSS RPGNGRAATVRCEGIGIG
Sbjct: 1   MAPLASMFNGAPLAPPLHFHSSRHHPLTSPAMLPINNRRSSLRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 216
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 215

[Close]

BLAST of Cmc11g0303631 vs. ExPASy TrEMBL
Match: A0A5A7SWJ9 (NAD(P)H-quinone oxidoreductase subunit N OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00760 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.7e-114
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60
           MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG
Sbjct: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNW 202
           FLALLPTLRPKVRVIAECGNW
Sbjct: 181 FLALLPTLRPKVRVIAECGNW 201

[Close]

BLAST of Cmc11g0303631 vs. ExPASy TrEMBL
Match: A0A6J1L763 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499786 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.9e-108
Identity = 193/214 (90.19%), Postives = 197/214 (92.06%), Query Frame = 0


Query: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60
           M P+ASM NGA LAP LHLH  R  PLTSPA + +  RR+ F  G GRAATVRCEGIGIG
Sbjct: 1   MPPLASMLNGAALAPSLHLHPRRLRPLTSPATLQVIGRRTRFGTGKGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 215
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 214

[Close]

BLAST of Cmc11g0303631 vs. ExPASy TrEMBL
Match: A0A6J1G6N3 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451247 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 191/214 (89.25%), Postives = 195/214 (91.12%), Query Frame = 0


Query: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60
           M P+ASM NGA LAP LHLH  R  P TS A + +  RR+ F  G GRAATVRCEGIGIG
Sbjct: 1   MPPLASMLNGAALAPSLHLHPRRLRPPTSAATLQVIGRRTRFGTGKGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLDALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 215
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 214

[Close]

BLAST of Cmc11g0303631 vs. TAIR 10
Match: AT5G58260.1 (oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor )

HSP 1 Score: 296.2 bits (757), Expect = 2.1e-80
Identity = 139/177 (78.53%), Postives = 156/177 (88.14%), Query Frame = 0


Query: 37  NRRSSFRPGNGRAATVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYE 96
           N RS  R    R+  V+C    I D+IGGDL+K D+GQWL DVEEHKA+AIY+PHEGGYE
Sbjct: 33  NTRSKRR----RSTGVKCS--SIADYIGGDLVKPDIGQWLQDVEEHKAIAIYAPHEGGYE 92

Query: 97  GRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAA 156
           GRYLNRL+ QGYYFLD+SARGLGDPETTL K +PVCPAHLGKQPIARWY+PPEVDYRLAA
Sbjct: 93  GRYLNRLKMQGYYFLDISARGLGDPETTLLKNYPVCPAHLGKQPIARWYYPPEVDYRLAA 152

Query: 157 LPPNAKGLVVWIIEAKVLSKAELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIA 214
           LPP+AKGLVVW++EAKVLSK+ELQFLALLP+LRP VRVIAECGNWRKF+WKPL EIA
Sbjct: 153 LPPSAKGLVVWVLEAKVLSKSELQFLALLPSLRPNVRVIAECGNWRKFVWKPLAEIA 203

[Close]

BLAST of Cmc11g0303631 vs. TAIR 10
Match: AT5G58260.2 (oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor )

HSP 1 Score: 223.0 bits (567), Expect = 2.3e-58
Identity = 104/137 (75.91%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 37  NRRSSFRPGNGRAATVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYE 96
           N RS  R    R+  V+C    I D+IGGDL+K D+GQWL DVEEHKA+AIY+PHEGGYE
Sbjct: 33  NTRSKRR----RSTGVKCS--SIADYIGGDLVKPDIGQWLQDVEEHKAIAIYAPHEGGYE 92

Query: 97  GRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAA 156
           GRYLNRL+ QGYYFLD+SARGLGDPETTL K +PVCPAHLGKQPIARWY+PPEVDYRLAA
Sbjct: 93  GRYLNRLKMQGYYFLDISARGLGDPETTLLKNYPVCPAHLGKQPIARWYYPPEVDYRLAA 152

Query: 157 LPPNAKGLVVWIIEAKV 174
           LPP+AKGLVVW++EAKV
Sbjct: 153 LPPSAKGLVVWVLEAKV 163

The following BLAST results are available for this feature:

BLAST of Cmc11g0303631 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456262.1	3.2e-123	100.00	PREDICTED: NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis melo...	[more]
XP_004139925.1	2.3e-121	98.14	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis sativus] >KGN46...	[more]
KAA0033539.1	3.6e-114	100.00	NAD(P)H-quinone oxidoreductase subunit N [Cucumis melo var. makuwa] >TYJ95648.1 ...	[more]
XP_038900583.1	5.9e-109	91.16	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Benincasa hispida]	[more]
XP_023007243.1	3.9e-108	90.19	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita maxima]	[more]

BLAST of Cmc11g0303631 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVM2	3.0e-79	78.53	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Arabidopsis thaliana ...	[more]
B8HUU1	4.5e-35	48.32	NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain PCC 7425 / AT...	[more]
B7JYJ3	3.2e-33	48.23	NAD(P)H-quinone oxidoreductase subunit N OS=Rippkaea orientalis (strain PCC 8801...	[more]
Q31L05	1.2e-32	49.66	NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus elongatus (strain PCC ...	[more]
Q5N0W6	1.2e-32	49.66	NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain ATCC 27144...	[more]

BLAST of Cmc11g0303631 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C430	1.6e-123	100.00	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A0A0KEC3	1.1e-121	98.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133810 PE=4 SV=1	[more]
A0A5A7SWJ9	1.7e-114	100.00	NAD(P)H-quinone oxidoreductase subunit N OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1L763	1.9e-108	90.19	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita maxima OX=3...	[more]
A0A6J1G6N3	1.3e-106	89.25	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita moschata OX...	[more]

BLAST of Cmc11g0303631 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58260.1	2.1e-80	78.53	oxidoreductases, acting on NADH or NADPH, quinone or similar compound as accepto...	[more]
AT5G58260.2	2.3e-58	75.91	oxidoreductases, acting on NADH or NADPH, quinone or similar compound as accepto...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020874	NAD(P)H-quinone oxidoreductase, subunit N	PFAM	PF11909	NdhN	coord: 74..211 e-value: 3.5E-56 score: 189.1
IPR020874	NAD(P)H-quinone oxidoreductase, subunit N	PANTHER	PTHR35515	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT N, CHLOROPLASTIC	coord: 33..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0303631.1	Cmc11g0303631.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly
cellular_component	GO:0016020	membrane
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding