Cmc11g0303551 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0303551
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 25009919 .. 25011735 (+)
RNA-Seq Expression	Cmc11g0303551
Synteny	Cmc11g0303551

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTAATAGTCAAGAACTGCTACCCCTTGTCCAGGATTGATGATTTGTTCGATCAGCTGCAAGAAGCCACAGTCTTTTCTAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATCAGGGATAGTGATATTCCTAAGACCACTTTCCGTTCCAGATACGGGCATTACGAGTTCATTGTGATGTCTCTTGGTTTGACTAATGCTTCTGCGGTATTTATGGACTTGATGAACAGGGGTTTAAGGATTTCTTAGACACGTTTGTCATAGTTTTCATTGACGATATTTTGATTTACTCCAAGACTAAGGCTGAGCATGAGAAGCATTTGCACCAGGTTTTGGAGACCCTTCGAGCTAATAAGTTGTACGCCAAGTTCTCCAAGTGTGAGTTCTGGCTGAAGAAGGTGACTTTTCTCGGCCACGTGGTTTCCAGTGAGAGAGTTTTCGTGGACCCAGCAAAGATCGAAGCGGTTACTAGTTGTTTTCGACCGTCTACAGTTAGCGAGATTCGTAGTTTCCTGGGTTTAGCAGGTTACTACAGGAGGTTCATGGAAGACTTCACTCGCATAGCCAGTCCCTTGACTCAGTTGACCAGGAAGGGGACTTCTTTTGCTTGGAGCCCAGCTTGTGAGAGTAGCTTCCAGGAACTTAAGCAGAAGCTTGTGTCTGCACCAGTCCTGACAGTGCCAGATGGATCTGAAAGTTTCGTGATCTACAGTGATGCCTCAAAGAAAAAACTGGGTTGTGTTGTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCTCGCCAGTTGAAGAGTCATGAACAGAACTACCCTACTCACGGCCTAGAATTGGCAGCAATGGTTTTTGCACTGAAGATATGGAGACATTACCTATACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTAAAGTACTTCTTCACCCAGAAGGAGTTAAACATGAGACAGAGAAGATGGCTTGAGTTGGTGAAGGATTATGACTGCAAGATTCTGTATCACCCAGGTAAGGCAAATGTAGTAGTTAATGTGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTTATCACCAAGTAAGCTCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCGCAGTAGGGGAAGTCACCTCACAGTTGGCTCAGTTGTCAGTGCAACCCACCTTGAGACAGAGGATTATTGTTGCTAGCTAAATGATTCTTATCTGGTCGAGAAGTGTCGTTTTGGTAGAGACAGGGCAAGGTGAGGATTTCTCCATATCCTCTGACGATGGCCTTACGTTTGAAGGACGTTTGTGCGTGCCAGAAGACAGTGCAGTCAAGACAGAGCTTTTGACCGAGGCTCATAGTTCTTCATTTACTATGCACCCTGGAAGTATAAAGATGTACCAAGACTTGAGGTGTGTCTATTGGTGGAGGAACATGAAAAGAGAAGTGGCAGACTTTGTCAGTAGATGTTTGGTGTGCCAGCAGGTGAAGGCACCTAGACCGAGGCCAGCAGGGTTGCTGCAACCCTTGACTGTGCCAGGCTGGAAATGGGAGAGCGTTTCGATGGACTTCATTACAGGACTGCCCAGGACTCTAAAGGGCTATACAATCATTTGGGTTATTGTTGACAGACTCACGAAGTCAGCCCACTTTGTTCCAGGGAAATCCACTTACATTGCCAGTAAGTGGAGACAATTATATATCATCGAGGTAGTGAGACTGCATGGAGTACCTGTATCTATCGTTTCTTACAGAGATGCTCGTTTCACATCGAAGTTCTAG

mRNA sequence

ATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTAATAGTCAAGAACTGCTACCCCTTGTCCAGGATTGATGATTTGTTCGATCAGCTGCAAGAAGCCACAGTCTTTTCTAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATCAGGGATAGTGATATTCCTAAGACCACTTTCCGTTCCAGATACGGGCATTACGAGTTCATTGGGTTTAAGGATTTCTTAGACACGTTTGTCATAGTTTTCATTGACGATATTTTGATTTACTCCAAGACTAAGGCTGAGCATGAGAAGCATTTGCACCAGGTTTTGGAGACCCTTCGAGCTAATAAGTTGTACGCCAAGTTCTCCAAGTGTGAGTTCTGGCTGAAGAAGGTGACTTTTCTCGGCCACGTGGTTTCCAGTGAGAGAGTTTTCGTGGACCCAGCAAAGATCGAAGCGGTTACTAGTTGTTTTCGACCGTCTACAGTTAGCGAGATTCGTAGTTTCCTGGGTTTAGCAGGTTACTACAGGAGGTTCATGGAAGACTTCACTCGCATAGCCAGTCCCTTGACTCAGTTGACCAGGAAGGGGACTTCTTTTGCTTGGAGCCCAGCTTGTGAGAGTAGCTTCCAGGAACTTAAGCAGAAGCTTGTGTCTGCACCAGTCCTGACAGTGCCAGATGGATCTGAAAGTTTCGTGATCTACAGTGATGCCTCAAAGAAAAAACTGGGTTGTGTTGTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCTCGCCAGTTGAAGAGTCATGAACAGAACTACCCTACTCACGGCCTAGAATTGGCAGCAATGGTTTTTGCACTGAAGATATGGAGACATTACCTATACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTAAAGTACTTCTTCACCCAGAAGGAGTTAAACATGAGACAGAGAAGATGGCTTGAGTTGGTGAAGGATTATGACTGCAAGATTCTGTATCACCCAGGGCAAGGTGAGGATTTCTCCATATCCTCTGACGATGGCCTTACGTTTGAAGGACGTTTGTGCGTGCCAGAAGACAGTGCAGTCAAGACAGAGCTTTTGACCGAGGCTCATAGTTCTTCATTTACTATGCACCCTGGAAGTATAAAGATGTACCAAGACTTGAGGTGTGTCTATTGGTGGAGGAACATGAAAAGAGAAGTGGCAGACTTTGTCAGTAGATGTTTGGTGTGCCAGCAGGTGAAGGCACCTAGACCGAGGCCAGCAGGGTTGCTGCAACCCTTGACTGTGCCAGGCTGGAAATGGGAGAGCGTTTCGATGGACTTCATTACAGGACTGCCCAGGACTCTAAAGGGCTATACAATCATTTGGGTTATTGTTGACAGACTCACGAAGTCAGCCCACTTTGTTCCAGGGAAATCCACTTACATTGCCAGTAAGTGGAGACAATTATATATCATCGAGGTAGTGAGACTGCATGGAGTACCTGTATCTATCGTTTCTTACAGAGATGCTCGTTTCACATCGAAGTTCTAG

Coding sequence (CDS)

ATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTAATAGTCAAGAACTGCTACCCCTTGTCCAGGATTGATGATTTGTTCGATCAGCTGCAAGAAGCCACAGTCTTTTCTAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATCAGGGATAGTGATATTCCTAAGACCACTTTCCGTTCCAGATACGGGCATTACGAGTTCATTGGGTTTAAGGATTTCTTAGACACGTTTGTCATAGTTTTCATTGACGATATTTTGATTTACTCCAAGACTAAGGCTGAGCATGAGAAGCATTTGCACCAGGTTTTGGAGACCCTTCGAGCTAATAAGTTGTACGCCAAGTTCTCCAAGTGTGAGTTCTGGCTGAAGAAGGTGACTTTTCTCGGCCACGTGGTTTCCAGTGAGAGAGTTTTCGTGGACCCAGCAAAGATCGAAGCGGTTACTAGTTGTTTTCGACCGTCTACAGTTAGCGAGATTCGTAGTTTCCTGGGTTTAGCAGGTTACTACAGGAGGTTCATGGAAGACTTCACTCGCATAGCCAGTCCCTTGACTCAGTTGACCAGGAAGGGGACTTCTTTTGCTTGGAGCCCAGCTTGTGAGAGTAGCTTCCAGGAACTTAAGCAGAAGCTTGTGTCTGCACCAGTCCTGACAGTGCCAGATGGATCTGAAAGTTTCGTGATCTACAGTGATGCCTCAAAGAAAAAACTGGGTTGTGTTGTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCTCGCCAGTTGAAGAGTCATGAACAGAACTACCCTACTCACGGCCTAGAATTGGCAGCAATGGTTTTTGCACTGAAGATATGGAGACATTACCTATACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTAAAGTACTTCTTCACCCAGAAGGAGTTAAACATGAGACAGAGAAGATGGCTTGAGTTGGTGAAGGATTATGACTGCAAGATTCTGTATCACCCAGGGCAAGGTGAGGATTTCTCCATATCCTCTGACGATGGCCTTACGTTTGAAGGACGTTTGTGCGTGCCAGAAGACAGTGCAGTCAAGACAGAGCTTTTGACCGAGGCTCATAGTTCTTCATTTACTATGCACCCTGGAAGTATAAAGATGTACCAAGACTTGAGGTGTGTCTATTGGTGGAGGAACATGAAAAGAGAAGTGGCAGACTTTGTCAGTAGATGTTTGGTGTGCCAGCAGGTGAAGGCACCTAGACCGAGGCCAGCAGGGTTGCTGCAACCCTTGACTGTGCCAGGCTGGAAATGGGAGAGCGTTTCGATGGACTTCATTACAGGACTGCCCAGGACTCTAAAGGGCTATACAATCATTTGGGTTATTGTTGACAGACTCACGAAGTCAGCCCACTTTGTTCCAGGGAAATCCACTTACATTGCCAGTAAGTGGAGACAATTATATATCATCGAGGTAGTGAGACTGCATGGAGTACCTGTATCTATCGTTTCTTACAGAGATGCTCGTTTCACATCGAAGTTCTAG

Protein sequence

MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYEFIGFKDFLDTFVIVFIDDILIYSKTKAEHEKHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSEIRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTVPDGSESFVIYSDASKKKLGCVVMQQGKVVAYASRQLKSHEQNYPTHGLELAAMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCKILYHPGQGEDFSISSDDGLTFEGRLCVPEDSAVKTELLTEAHSSSFTMHPGSIKMYQDLRCVYWWRNMKREVADFVSRCLVCQQVKAPRPRPAGLLQPLTVPGWKWESVSMDFITGLPRTLKGYTIIWVIVDRLTKSAHFVPGKSTYIASKWRQLYIIEVVRLHGVPVSIVSYRDARFTSKF

Homology

[Close]

BLAST of Cmc11g0303551 vs. NCBI nr
Match: KAA0048442.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 900.6 bits (2326), Expect = 6.2e-258
Identity = 454/574 (79.09%), Postives = 478/574 (83.28%), Query Frame = 0


Query: 1    MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTT 60
            MRLCIDYRELNKV VKN YPL RIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKT 
Sbjct: 606  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 665

Query: 61   FRSRYGHYEFI-------------------GFKDFLDTFVIVFIDDILIYSKTKAEHEKH 120
            FRSRYGHYEF+                    FKDFLD+FVIVFIDDILIYSKT+AEHE+H
Sbjct: 666  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 725

Query: 121  LHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSE 180
            LHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSE V VDPAKIEAVT+  RPSTVSE
Sbjct: 726  LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSE 785

Query: 181  IRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTV 240
            IRSFLGLAGYYRRF+EDF+RIASPLTQLTRKGT F WSPACE SFQELKQKLV+APVLTV
Sbjct: 786  IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTV 845

Query: 241  PDGSESFVIYSDASKKKLGCVVMQQGKVVAYASRQLKSHEQNYPTHGLELAAMVFALKIW 300
            PDGS +FVIYSDASKK LGCV+MQQGKVVAYASRQLK HEQNYPTH LELAA+VFALKIW
Sbjct: 846  PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 905

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCKILYHPG---------- 360
            RHYLYGEKIQI+TD+KSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHPG          
Sbjct: 906  RHYLYGEKIQIYTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 965

Query: 361  --------------------------------------QGEDFSISSDDGLTFEGRLCVP 420
                                                  QGEDFSISSDDGL FEGRLCVP
Sbjct: 966  RKVAHSAALITKQTPLLRDFERAEIVVSVEKRRMVETEQGEDFSISSDDGLMFEGRLCVP 1025

Query: 421  EDSAVKTELLTEAHSSSFTMHPGSIKMYQDLRCVYWWRNMKREVADFVSRCLVCQQVKAP 480
            EDSAVKTELLTEAHSS FTMHPGS KMYQDLR VYWWR MKR+VADFVSRCLVCQQVKAP
Sbjct: 1026 EDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAP 1085

Query: 481  RPRPAGLLQPLTVPGWKWESVSMDFITGLPRTLKGYTIIWVIVDRLTKSAHFVPGKSTYI 508
            R  PAGLLQPL+VPGWKWESVSMDFITGLP+TLKGYT+IWV+VDRLTKSAHFVPGKSTY 
Sbjct: 1086 RQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYT 1145

[Close]

BLAST of Cmc11g0303551 vs. NCBI nr
Match: KAA0040542.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 899.8 bits (2324), Expect = 1.1e-257
Identity = 453/568 (79.75%), Postives = 477/568 (83.98%), Query Frame = 0


Query: 1   MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTT 60
           MRLCIDYRELNKV VKN YPL RIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKT 
Sbjct: 411 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 470

Query: 61  FRSRYGHYEFI-------------------GFKDFLDTFVIVFIDDILIYSKTKAEHEKH 120
           FRSRYGHYEF+                    FKDFLD+FVIVFIDDILIYSKT+AEHE+H
Sbjct: 471 FRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 530

Query: 121 LHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSE 180
           LHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSE V VDPAKIEAVT+  RPSTVSE
Sbjct: 531 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 590

Query: 181 IRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTV 240
           IRSFLGLAGYYRRF+EDF+RIASPLTQLTRKGT F WSPACESSFQELKQKLV+APVLT+
Sbjct: 591 IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTL 650

Query: 241 PDGSESFVIYSDASKKKLGCVVMQQGKVVAYASRQLKSHEQNYPTHGLELAAMVFALKIW 300
           PDGS +FVIYSDASKK LGCV+MQQGKVVAYASRQLK HEQNYPTH LELAA+VFALKIW
Sbjct: 651 PDGSRNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 710

Query: 301 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCKILYHP----------- 360
           +HYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHP           
Sbjct: 711 KHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPVSVGEVTAQLA 770

Query: 361 -------------------------------GQGEDFSISSDDGLTFEGRLCVPEDSAVK 420
                                          GQGEDFSIS+DDGL FE RLCVPEDSAVK
Sbjct: 771 QLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVK 830

Query: 421 TELLTEAHSSSFTMHPGSIKMYQDLRCVYWWRNMKREVADFVSRCLVCQQVKAPRPRPAG 480
           TELLTEAHSS FTMHPGS KMYQDLR V WWR MKREVADFVSRCLVCQQVKAPR  PAG
Sbjct: 831 TELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAG 890

Query: 481 LLQPLTVPGWKWESVSMDFITGLPRTLKGYTIIWVIVDRLTKSAHFVPGKSTYIASKWRQ 508
           LLQPL+VPGWKWESVSMDFITGLP+TLKGYT+IWV+VDRLTKSAHFVPGKSTY ASKW Q
Sbjct: 891 LLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQ 950

[Close]

BLAST of Cmc11g0303551 vs. NCBI nr
Match: KAA0054634.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 898.7 bits (2321), Expect = 2.4e-257
Identity = 456/580 (78.62%), Postives = 477/580 (82.24%), Query Frame = 0


Query: 1    MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTT 60
            M LCIDYRELNKV VKN YPL RIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKTT
Sbjct: 610  MCLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTT 669

Query: 61   FRSRYGHYEFI-------------------GFKDFLDTFVIVFIDDILIYSKTKAEHEKH 120
            FRSRYGHYEF+                    FKDFLD+FVIVFIDDILIYSKT+AEHE+H
Sbjct: 670  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 729

Query: 121  LHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSE 180
            LHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSE V VDPAKIEAVT+  RPSTVSE
Sbjct: 730  LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 789

Query: 181  IRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTV 240
            IRSFLGLAGYYRRF+EDF+RIASPLTQLTRKGT F WSPACESSFQELKQKLV+APVLTV
Sbjct: 790  IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTV 849

Query: 241  PDGSESFVIYSDASKKKLGCVVMQQGKVVAYASRQLKSHEQNYPTHGLELAAMVFALKIW 300
            PDGS +FVIYSDASKK LGCV+MQQGKVVAYASRQLK HEQNYPTH LELAA+VFALKIW
Sbjct: 850  PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 909

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCKILYHP----------- 360
            RHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHP           
Sbjct: 910  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 969

Query: 361  -------------------------------------------GQGEDFSISSDDGLTFE 420
                                                       GQGEDFSISSDDGL FE
Sbjct: 970  RKVAHSAALITKQTPLLRDFERAEIAVSLNDPYLAEKRYMVETGQGEDFSISSDDGLMFE 1029

Query: 421  GRLCVPEDSAVKTELLTEAHSSSFTMHPGSIKMYQDLRCVYWWRNMKREVADFVSRCLVC 480
            GRLCVPEDSAVKTELLTEAHSS FTMHPGS KMYQDLR VYWWR MKREVADFVSRCLVC
Sbjct: 1030 GRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVC 1089

Query: 481  QQVKAPRPRPAGLLQPLTVPGWKWESVSMDFITGLPRTLKGYTIIWVIVDRLTKSAHFVP 508
            QQVKAPR  PAGLLQPL+VPGWKWESVSMDFITGLP+ LKGYT+IWV+VDRLTKSAHFVP
Sbjct: 1090 QQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGLPKNLKGYTVIWVVVDRLTKSAHFVP 1149

[Close]

BLAST of Cmc11g0303551 vs. NCBI nr
Match: KAA0063098.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 892.5 bits (2305), Expect = 1.7e-255
Identity = 455/605 (75.21%), Postives = 479/605 (79.17%), Query Frame = 0


Query: 1    MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTT 60
            MRLCIDYRELNKV +KN YPL RIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKT 
Sbjct: 641  MRLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 700

Query: 61   FRSRYGHYEFI-------------------GFKDFLDTFVIVFIDDILIYSKTKAEHEKH 120
            FRSRYGHYEF+                    FKDFLD+FVIVFIDDILIYSKT+AEHE+H
Sbjct: 701  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 760

Query: 121  LHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSE 180
            LHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSE V VDPAKIEAVT+  RPSTVSE
Sbjct: 761  LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 820

Query: 181  IRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTV 240
            IRSFLGLAGYYRRF+EDF+RIASPLTQLTRKGT F WSPACE SFQELKQKLV+APVLTV
Sbjct: 821  IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTV 880

Query: 241  PDGSESFVIYSDASKKKLGCVVMQQGKVVAYASRQLKSHEQNYPTHGLELAAMVFALKIW 300
            PDGS +FVIYSDASKK+LGCV+MQQGKVVAYASRQLK+HEQNYPTH LELAA+VFALKIW
Sbjct: 881  PDGSGNFVIYSDASKKELGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIW 940

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCKILYHP----------- 360
            RHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHP           
Sbjct: 941  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1000

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 1001 RKVAHSAALITKQTPLLRDFERAEITVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 1060

Query: 421  --------GQGEDFSISSDDGLTFEGRLCVPEDSAVKTELLTEAHSSSFTMHPGSIKMYQ 480
                    GQGEDFSISSDDGL FEGRLCVPEDSAVKTELLTEAHSS FTMHPGS KMYQ
Sbjct: 1061 EKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 1120

Query: 481  DLRCVYWWRNMKREVADFVSRCLVCQQVKAPRPRPAGLLQPLTVPGWKWESVSMDFITGL 508
            DLR VYWWR MKREVADFVSRCLVCQQVKAPR  PAGLLQPL+VPGWKWESVSMDFITGL
Sbjct: 1121 DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGL 1180

[Close]

BLAST of Cmc11g0303551 vs. NCBI nr
Match: KAA0045309.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 891.3 bits (2302), Expect = 3.8e-255
Identity = 456/605 (75.37%), Postives = 477/605 (78.84%), Query Frame = 0


Query: 1   MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTT 60
           MRLCIDYRELNKV VKN YPL RIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKT 
Sbjct: 179 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 238

Query: 61  FRSRYGHYEFI-------------------GFKDFLDTFVIVFIDDILIYSKTKAEHEKH 120
           FRSRYGHYEF+                    FKDFLD+FVIVFIDDILIYSKT+AEHE+H
Sbjct: 239 FRSRYGHYEFVVISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 298

Query: 121 LHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSE 180
           LHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSE V VDPAKIEAVT+  RPSTVSE
Sbjct: 299 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 358

Query: 181 IRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTV 240
           IRSFLGLAGYYRRF+ED +RIASPLTQLTRKGT F WSPACE SFQELKQKLV+APVLTV
Sbjct: 359 IRSFLGLAGYYRRFVEDLSRIASPLTQLTRKGTPFVWSPACECSFQELKQKLVTAPVLTV 418

Query: 241 PDGSESFVIYSDASKKKLGCVVMQQGKVVAYASRQLKSHEQNYPTHGLELAAMVFALKIW 300
           PDGS +FVIYSDASKK LGCV+MQQGKVVAYASRQLK HEQNYPTH LELAA+VFALKIW
Sbjct: 419 PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 478

Query: 301 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCKILYHP----------- 360
           RHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHP           
Sbjct: 479 RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLS 538

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 539 RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 598

Query: 421 --------GQGEDFSISSDDGLTFEGRLCVPEDSAVKTELLTEAHSSSFTMHPGSIKMYQ 480
                   GQGEDFSISSDDGL FEGRLCVPEDSAVKTELLTEAHSS FTMHPGS KMYQ
Sbjct: 599 EKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 658

Query: 481 DLRCVYWWRNMKREVADFVSRCLVCQQVKAPRPRPAGLLQPLTVPGWKWESVSMDFITGL 508
           DLR VYWWR MKREVADFVSRCLVCQQVKAPR  PAGLLQPL+VPGWKWESVSMDFITGL
Sbjct: 659 DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGL 718

[Close]

BLAST of Cmc11g0303551 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.4e-71
Identity = 172/598 (28.76%), Postives = 286/598 (47.83%), Query Frame = 0


Query: 1    MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTT 60
            +R+ +DY+ LNK +  N YPL  I+ L  ++Q +T+F+K+DL+S YH +R+R  D  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFI-----------GFKDFLDTF--------VIVFIDDILIYSKTKAEHEKH 120
            FR   G +E++            F+ F++T         V+ ++DDILI+SK+++EH KH
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSE 180
            +  VL+ L+   L    +KCEF   +V F+G+ +S +        I+ V    +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  IRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTV 240
            +R FLG   Y R+F+   +++  PL  L +K   + W+P    + + +KQ LVS PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGSESFVIYSDASKKKLGCVVMQQGK-----VVAYASRQLKSHEQNYPTHGLELAAMVF 300
             D S+  ++ +DAS   +G V+ Q+        V Y S ++   + NY     E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCKILYHPGQ 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ +I Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  G-----------------------------------EDF--------------------- 420
                                                +DF                     
Sbjct: 822  ANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881

Query: 421  ------SISSDDGLTFEGR--LCVPEDSAVKTELLTEAHSSSFTMHPGSIKMYQDLRCVY 480
                  +I   DGL    +  + +P D+ +   ++ + H     +HPG   +   +   +
Sbjct: 882  DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRF 941

Query: 481  WWRNMKREVADFVSRCLVCQQVKAPRPRPAGLLQPLTVPGWKWESVSMDFITGLPRTLKG 507
             W+ +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMDFIT LP +  G
Sbjct: 942  TWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SG 1001

[Close]

BLAST of Cmc11g0303551 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.4e-71
Identity = 172/598 (28.76%), Postives = 286/598 (47.83%), Query Frame = 0


Query: 1    MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTT 60
            +R+ +DY+ LNK +  N YPL  I+ L  ++Q +T+F+K+DL+S YH +R+R  D  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFI-----------GFKDFLDTF--------VIVFIDDILIYSKTKAEHEKH 120
            FR   G +E++            F+ F++T         V+ ++DDILI+SK+++EH KH
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSE 180
            +  VL+ L+   L    +KCEF   +V F+G+ +S +        I+ V    +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  IRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTV 240
            +R FLG   Y R+F+   +++  PL  L +K   + W+P    + + +KQ LVS PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGSESFVIYSDASKKKLGCVVMQQGK-----VVAYASRQLKSHEQNYPTHGLELAAMVF 300
             D S+  ++ +DAS   +G V+ Q+        V Y S ++   + NY     E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCKILYHPGQ 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ +I Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  G-----------------------------------EDF--------------------- 420
                                                +DF                     
Sbjct: 822  ANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881

Query: 421  ------SISSDDGLTFEGR--LCVPEDSAVKTELLTEAHSSSFTMHPGSIKMYQDLRCVY 480
                  +I   DGL    +  + +P D+ +   ++ + H     +HPG   +   +   +
Sbjct: 882  DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRF 941

Query: 481  WWRNMKREVADFVSRCLVCQQVKAPRPRPAGLLQPLTVPGWKWESVSMDFITGLPRTLKG 507
             W+ +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMDFIT LP +  G
Sbjct: 942  TWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SG 1001

[Close]

BLAST of Cmc11g0303551 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.4e-71
Identity = 172/598 (28.76%), Postives = 286/598 (47.83%), Query Frame = 0


Query: 1    MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTT 60
            +R+ +DY+ LNK +  N YPL  I+ L  ++Q +T+F+K+DL+S YH +R+R  D  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFI-----------GFKDFLDTF--------VIVFIDDILIYSKTKAEHEKH 120
            FR   G +E++            F+ F++T         V+ ++DDILI+SK+++EH KH
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSE 180
            +  VL+ L+   L    +KCEF   +V F+G+ +S +        I+ V    +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  IRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTV 240
            +R FLG   Y R+F+   +++  PL  L +K   + W+P    + + +KQ LVS PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGSESFVIYSDASKKKLGCVVMQQGK-----VVAYASRQLKSHEQNYPTHGLELAAMVF 300
             D S+  ++ +DAS   +G V+ Q+        V Y S ++   + NY     E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCKILYHPGQ 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ +I Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  G-----------------------------------EDF--------------------- 420
                                                +DF                     
Sbjct: 822  ANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881

Query: 421  ------SISSDDGLTFEGR--LCVPEDSAVKTELLTEAHSSSFTMHPGSIKMYQDLRCVY 480
                  +I   DGL    +  + +P D+ +   ++ + H     +HPG   +   +   +
Sbjct: 882  DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRF 941

Query: 481  WWRNMKREVADFVSRCLVCQQVKAPRPRPAGLLQPLTVPGWKWESVSMDFITGLPRTLKG 507
             W+ +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMDFIT LP +  G
Sbjct: 942  TWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SG 1001

[Close]

BLAST of Cmc11g0303551 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.4e-71
Identity = 172/598 (28.76%), Postives = 286/598 (47.83%), Query Frame = 0


Query: 1    MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTT 60
            +R+ +DY+ LNK +  N YPL  I+ L  ++Q +T+F+K+DL+S YH +R+R  D  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFI-----------GFKDFLDTF--------VIVFIDDILIYSKTKAEHEKH 120
            FR   G +E++            F+ F++T         V+ ++DDILI+SK+++EH KH
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSE 180
            +  VL+ L+   L    +KCEF   +V F+G+ +S +        I+ V    +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  IRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTV 240
            +R FLG   Y R+F+   +++  PL  L +K   + W+P    + + +KQ LVS PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGSESFVIYSDASKKKLGCVVMQQGK-----VVAYASRQLKSHEQNYPTHGLELAAMVF 300
             D S+  ++ +DAS   +G V+ Q+        V Y S ++   + NY     E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCKILYHPGQ 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ +I Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  G-----------------------------------EDF--------------------- 420
                                                +DF                     
Sbjct: 822  ANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881

Query: 421  ------SISSDDGLTFEGR--LCVPEDSAVKTELLTEAHSSSFTMHPGSIKMYQDLRCVY 480
                  +I   DGL    +  + +P D+ +   ++ + H     +HPG   +   +   +
Sbjct: 882  DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRF 941

Query: 481  WWRNMKREVADFVSRCLVCQQVKAPRPRPAGLLQPLTVPGWKWESVSMDFITGLPRTLKG 507
             W+ +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMDFIT LP +  G
Sbjct: 942  TWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SG 1001

[Close]

BLAST of Cmc11g0303551 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.4e-71
Identity = 172/598 (28.76%), Postives = 286/598 (47.83%), Query Frame = 0


Query: 1    MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTT 60
            +R+ +DY+ LNK +  N YPL  I+ L  ++Q +T+F+K+DL+S YH +R+R  D  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFI-----------GFKDFLDTF--------VIVFIDDILIYSKTKAEHEKH 120
            FR   G +E++            F+ F++T         V+ ++DDILI+SK+++EH KH
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSE 180
            +  VL+ L+   L    +KCEF   +V F+G+ +S +        I+ V    +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  IRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTV 240
            +R FLG   Y R+F+   +++  PL  L +K   + W+P    + + +KQ LVS PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGSESFVIYSDASKKKLGCVVMQQGK-----VVAYASRQLKSHEQNYPTHGLELAAMVF 300
             D S+  ++ +DAS   +G V+ Q+        V Y S ++   + NY     E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCKILYHPGQ 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ +I Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  G-----------------------------------EDF--------------------- 420
                                                +DF                     
Sbjct: 822  ANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNE 881

Query: 421  ------SISSDDGLTFEGR--LCVPEDSAVKTELLTEAHSSSFTMHPGSIKMYQDLRCVY 480
                  +I   DGL    +  + +P D+ +   ++ + H     +HPG   +   +   +
Sbjct: 882  DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRF 941

Query: 481  WWRNMKREVADFVSRCLVCQQVKAPRPRPAGLLQPLTVPGWKWESVSMDFITGLPRTLKG 507
             W+ +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMDFIT LP +  G
Sbjct: 942  TWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SG 1001

[Close]

BLAST of Cmc11g0303551 vs. ExPASy TrEMBL
Match: A0A5A7TY28 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G00240 PE=4 SV=1)

HSP 1 Score: 900.6 bits (2326), Expect = 3.0e-258
Identity = 454/574 (79.09%), Postives = 478/574 (83.28%), Query Frame = 0


Query: 1    MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTT 60
            MRLCIDYRELNKV VKN YPL RIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKT 
Sbjct: 606  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 665

Query: 61   FRSRYGHYEFI-------------------GFKDFLDTFVIVFIDDILIYSKTKAEHEKH 120
            FRSRYGHYEF+                    FKDFLD+FVIVFIDDILIYSKT+AEHE+H
Sbjct: 666  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 725

Query: 121  LHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSE 180
            LHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSE V VDPAKIEAVT+  RPSTVSE
Sbjct: 726  LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSE 785

Query: 181  IRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTV 240
            IRSFLGLAGYYRRF+EDF+RIASPLTQLTRKGT F WSPACE SFQELKQKLV+APVLTV
Sbjct: 786  IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTV 845

Query: 241  PDGSESFVIYSDASKKKLGCVVMQQGKVVAYASRQLKSHEQNYPTHGLELAAMVFALKIW 300
            PDGS +FVIYSDASKK LGCV+MQQGKVVAYASRQLK HEQNYPTH LELAA+VFALKIW
Sbjct: 846  PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 905

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCKILYHPG---------- 360
            RHYLYGEKIQI+TD+KSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHPG          
Sbjct: 906  RHYLYGEKIQIYTDYKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 965

Query: 361  --------------------------------------QGEDFSISSDDGLTFEGRLCVP 420
                                                  QGEDFSISSDDGL FEGRLCVP
Sbjct: 966  RKVAHSAALITKQTPLLRDFERAEIVVSVEKRRMVETEQGEDFSISSDDGLMFEGRLCVP 1025

Query: 421  EDSAVKTELLTEAHSSSFTMHPGSIKMYQDLRCVYWWRNMKREVADFVSRCLVCQQVKAP 480
            EDSAVKTELLTEAHSS FTMHPGS KMYQDLR VYWWR MKR+VADFVSRCLVCQQVKAP
Sbjct: 1026 EDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAP 1085

Query: 481  RPRPAGLLQPLTVPGWKWESVSMDFITGLPRTLKGYTIIWVIVDRLTKSAHFVPGKSTYI 508
            R  PAGLLQPL+VPGWKWESVSMDFITGLP+TLKGYT+IWV+VDRLTKSAHFVPGKSTY 
Sbjct: 1086 RQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYT 1145

[Close]

BLAST of Cmc11g0303551 vs. ExPASy TrEMBL
Match: A0A5A7TAT0 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G00960 PE=4 SV=1)

HSP 1 Score: 899.8 bits (2324), Expect = 5.1e-258
Identity = 453/568 (79.75%), Postives = 477/568 (83.98%), Query Frame = 0


Query: 1   MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTT 60
           MRLCIDYRELNKV VKN YPL RIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKT 
Sbjct: 411 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 470

Query: 61  FRSRYGHYEFI-------------------GFKDFLDTFVIVFIDDILIYSKTKAEHEKH 120
           FRSRYGHYEF+                    FKDFLD+FVIVFIDDILIYSKT+AEHE+H
Sbjct: 471 FRSRYGHYEFVVMSFGLTNGPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 530

Query: 121 LHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSE 180
           LHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSE V VDPAKIEAVT+  RPSTVSE
Sbjct: 531 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 590

Query: 181 IRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTV 240
           IRSFLGLAGYYRRF+EDF+RIASPLTQLTRKGT F WSPACESSFQELKQKLV+APVLT+
Sbjct: 591 IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTL 650

Query: 241 PDGSESFVIYSDASKKKLGCVVMQQGKVVAYASRQLKSHEQNYPTHGLELAAMVFALKIW 300
           PDGS +FVIYSDASKK LGCV+MQQGKVVAYASRQLK HEQNYPTH LELAA+VFALKIW
Sbjct: 651 PDGSRNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 710

Query: 301 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCKILYHP----------- 360
           +HYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHP           
Sbjct: 711 KHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPVSVGEVTAQLA 770

Query: 361 -------------------------------GQGEDFSISSDDGLTFEGRLCVPEDSAVK 420
                                          GQGEDFSIS+DDGL FE RLCVPEDSAVK
Sbjct: 771 QLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISADDGLMFEERLCVPEDSAVK 830

Query: 421 TELLTEAHSSSFTMHPGSIKMYQDLRCVYWWRNMKREVADFVSRCLVCQQVKAPRPRPAG 480
           TELLTEAHSS FTMHPGS KMYQDLR V WWR MKREVADFVSRCLVCQQVKAPR  PAG
Sbjct: 831 TELLTEAHSSPFTMHPGSTKMYQDLRSVNWWRGMKREVADFVSRCLVCQQVKAPRQHPAG 890

Query: 481 LLQPLTVPGWKWESVSMDFITGLPRTLKGYTIIWVIVDRLTKSAHFVPGKSTYIASKWRQ 508
           LLQPL+VPGWKWESVSMDFITGLP+TLKGYT+IWV+VDRLTKSAHFVPGKSTY ASKW Q
Sbjct: 891 LLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQ 950

[Close]

BLAST of Cmc11g0303551 vs. ExPASy TrEMBL
Match: A0A5A7UHL7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G004390 PE=4 SV=1)

HSP 1 Score: 898.7 bits (2321), Expect = 1.1e-257
Identity = 456/580 (78.62%), Postives = 477/580 (82.24%), Query Frame = 0


Query: 1    MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTT 60
            M LCIDYRELNKV VKN YPL RIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKTT
Sbjct: 610  MCLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTT 669

Query: 61   FRSRYGHYEFI-------------------GFKDFLDTFVIVFIDDILIYSKTKAEHEKH 120
            FRSRYGHYEF+                    FKDFLD+FVIVFIDDILIYSKT+AEHE+H
Sbjct: 670  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 729

Query: 121  LHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSE 180
            LHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSE V VDPAKIEAVT+  RPSTVSE
Sbjct: 730  LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 789

Query: 181  IRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTV 240
            IRSFLGLAGYYRRF+EDF+RIASPLTQLTRKGT F WSPACESSFQELKQKLV+APVLTV
Sbjct: 790  IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTV 849

Query: 241  PDGSESFVIYSDASKKKLGCVVMQQGKVVAYASRQLKSHEQNYPTHGLELAAMVFALKIW 300
            PDGS +FVIYSDASKK LGCV+MQQGKVVAYASRQLK HEQNYPTH LELAA+VFALKIW
Sbjct: 850  PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 909

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCKILYHP----------- 360
            RHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHP           
Sbjct: 910  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 969

Query: 361  -------------------------------------------GQGEDFSISSDDGLTFE 420
                                                       GQGEDFSISSDDGL FE
Sbjct: 970  RKVAHSAALITKQTPLLRDFERAEIAVSLNDPYLAEKRYMVETGQGEDFSISSDDGLMFE 1029

Query: 421  GRLCVPEDSAVKTELLTEAHSSSFTMHPGSIKMYQDLRCVYWWRNMKREVADFVSRCLVC 480
            GRLCVPEDSAVKTELLTEAHSS FTMHPGS KMYQDLR VYWWR MKREVADFVSRCLVC
Sbjct: 1030 GRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVC 1089

Query: 481  QQVKAPRPRPAGLLQPLTVPGWKWESVSMDFITGLPRTLKGYTIIWVIVDRLTKSAHFVP 508
            QQVKAPR  PAGLLQPL+VPGWKWESVSMDFITGLP+ LKGYT+IWV+VDRLTKSAHFVP
Sbjct: 1090 QQVKAPRQCPAGLLQPLSVPGWKWESVSMDFITGLPKNLKGYTVIWVVVDRLTKSAHFVP 1149

[Close]

BLAST of Cmc11g0303551 vs. ExPASy TrEMBL
Match: A0A5A7V646 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1337G00030 PE=4 SV=1)

HSP 1 Score: 892.5 bits (2305), Expect = 8.2e-256
Identity = 455/605 (75.21%), Postives = 479/605 (79.17%), Query Frame = 0


Query: 1    MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTT 60
            MRLCIDYRELNKV +KN YPL RIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKT 
Sbjct: 641  MRLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 700

Query: 61   FRSRYGHYEFI-------------------GFKDFLDTFVIVFIDDILIYSKTKAEHEKH 120
            FRSRYGHYEF+                    FKDFLD+FVIVFIDDILIYSKT+AEHE+H
Sbjct: 701  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 760

Query: 121  LHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSE 180
            LHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSE V VDPAKIEAVT+  RPSTVSE
Sbjct: 761  LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 820

Query: 181  IRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTV 240
            IRSFLGLAGYYRRF+EDF+RIASPLTQLTRKGT F WSPACE SFQELKQKLV+APVLTV
Sbjct: 821  IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTV 880

Query: 241  PDGSESFVIYSDASKKKLGCVVMQQGKVVAYASRQLKSHEQNYPTHGLELAAMVFALKIW 300
            PDGS +FVIYSDASKK+LGCV+MQQGKVVAYASRQLK+HEQNYPTH LELAA+VFALKIW
Sbjct: 881  PDGSGNFVIYSDASKKELGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIW 940

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCKILYHP----------- 360
            RHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHP           
Sbjct: 941  RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1000

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 1001 RKVAHSAALITKQTPLLRDFERAEITVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 1060

Query: 421  --------GQGEDFSISSDDGLTFEGRLCVPEDSAVKTELLTEAHSSSFTMHPGSIKMYQ 480
                    GQGEDFSISSDDGL FEGRLCVPEDSAVKTELLTEAHSS FTMHPGS KMYQ
Sbjct: 1061 EKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 1120

Query: 481  DLRCVYWWRNMKREVADFVSRCLVCQQVKAPRPRPAGLLQPLTVPGWKWESVSMDFITGL 508
            DLR VYWWR MKREVADFVSRCLVCQQVKAPR  PAGLLQPL+VPGWKWESVSMDFITGL
Sbjct: 1121 DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGL 1180

[Close]

BLAST of Cmc11g0303551 vs. ExPASy TrEMBL
Match: A0A5A7TVN9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00750 PE=4 SV=1)

HSP 1 Score: 891.3 bits (2302), Expect = 1.8e-255
Identity = 456/605 (75.37%), Postives = 477/605 (78.84%), Query Frame = 0


Query: 1   MRLCIDYRELNKVIVKNCYPLSRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTT 60
           MRLCIDYRELNKV VKN YPL RIDDLFDQLQ ATVFSKIDLRSGYHQLRIRD DIPKT 
Sbjct: 179 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 238

Query: 61  FRSRYGHYEFI-------------------GFKDFLDTFVIVFIDDILIYSKTKAEHEKH 120
           FRSRYGHYEF+                    FKDFLD+FVIVFIDDILIYSKT+AEHE+H
Sbjct: 239 FRSRYGHYEFVVISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 298

Query: 121 LHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSERVFVDPAKIEAVTSCFRPSTVSE 180
           LHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSE V VDPAKIEAVT+  RPSTVSE
Sbjct: 299 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 358

Query: 181 IRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPVLTV 240
           IRSFLGLAGYYRRF+ED +RIASPLTQLTRKGT F WSPACE SFQELKQKLV+APVLTV
Sbjct: 359 IRSFLGLAGYYRRFVEDLSRIASPLTQLTRKGTPFVWSPACECSFQELKQKLVTAPVLTV 418

Query: 241 PDGSESFVIYSDASKKKLGCVVMQQGKVVAYASRQLKSHEQNYPTHGLELAAMVFALKIW 300
           PDGS +FVIYSDASKK LGCV+MQQGKVVAYASRQLK HEQNYPTH LELAA+VFALKIW
Sbjct: 419 PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIW 478

Query: 301 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCKILYHP----------- 360
           RHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHP           
Sbjct: 479 RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLS 538

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 539 RKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLA 598

Query: 421 --------GQGEDFSISSDDGLTFEGRLCVPEDSAVKTELLTEAHSSSFTMHPGSIKMYQ 480
                   GQGEDFSISSDDGL FEGRLCVPEDSAVKTELLTEAHSS FTMHPGS KMYQ
Sbjct: 599 EKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQ 658

Query: 481 DLRCVYWWRNMKREVADFVSRCLVCQQVKAPRPRPAGLLQPLTVPGWKWESVSMDFITGL 508
           DLR VYWWR MKREVADFVSRCLVCQQVKAPR  PAGLLQPL+VPGWKWESVSMDFITGL
Sbjct: 659 DLRSVYWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGL 718

[Close]

BLAST of Cmc11g0303551 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 2.4e-21
Identity = 52/131 (39.69%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 101 HLHQVLETLRANKLYAKFSKCEFWLKKVTFLG--HVVSSERVFVDPAKIEAVTSCFRPST 160
           HL  VL+    ++ YA   KC F   ++ +LG  H++S E V  DPAK+EA+     P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 161 VSEIRSFLGLAGYYRRFMEDFTRIASPLTQLTRKGTSFAWSPACESSFQELKQKLVSAPV 220
            +E+R FLGL GYYRRF++++ +I  PLT+L +K  S  W+     +F+ LK  + + PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKK-NSLKWTEMAALAFKALKGAVTTLPV 122

Query: 221 LTVPDGSESFV 230
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc11g0303551 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048442.1	6.2e-258	79.09	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040542.1	1.1e-257	79.75	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0054634.1	2.4e-257	78.62	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063098.1	1.7e-255	75.21	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045309.1	3.8e-255	75.37	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0303551 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	5.4e-71	28.76	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	5.4e-71	28.76	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	5.4e-71	28.76	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	5.4e-71	28.76	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	5.4e-71	28.76	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0303551 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TY28	3.0e-258	79.09	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61...	[more]
A0A5A7TAT0	5.1e-258	79.75	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7UHL7	1.1e-257	78.62	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24...	[more]
A0A5A7V646	8.2e-256	75.21	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7TVN9	1.8e-255	75.37	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31...	[more]

BLAST of Cmc11g0303551 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.4e-21	39.69	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 334..411 e-value: 1.1E-16 score: 62.8
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..75 e-value: 2.2E-47 score: 163.1
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 149..412
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 149..412
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 229..331 e-value: 6.38823E-45 score: 151.876
None	No IPR available	CDD	cd01647	RT_LTR	coord: 2..135 e-value: 4.18806E-60 score: 193.966
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 225..322 e-value: 4.1E-32 score: 110.6
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 421..507 e-value: 1.2E-11 score: 46.3
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 19..135 e-value: 2.2E-47 score: 163.1
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 145..238 e-value: 1.3E-28 score: 100.9
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 356..412 e-value: 7.1E-16 score: 58.0
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 78..134 e-value: 1.1E-9 score: 38.2
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..328
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 424..506

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0303551.1	Cmc11g0303551.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0008270	zinc ion binding