
Cmc11g0303511 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCAGAATTCCAAAAAGGGTCTGCTACCATACAGATATGAAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCCTCTGCTGTTGGGAGCCTGATGTATGCAATGTTATGTATTAGACCTGACATTTGCTATTTAGTAGGGATTGTTAGTAGATATCAGTCCAATCCTGGACGTGATCATTGGACAGCCGTTAAGAATATTCTAAAATATCTTAGAAGAACAAAAGACTACATGCTTGTGTATGGTTCTAAGGATCTGATCCTTACTGGATACACGACTCCGATTTTCAATCTGATAAAGATGCTAGAAAGTCTACATCATGATTAG ATGTCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCAGAATTCCAAAAAGGGTCTGCTACCATACAGATATGAAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCCTCTGCTGTTGGGAGCCTGATGTATGCAATGTTATGTATTAGACCTGACATTTGCTATTTAGTAGGGATTGTTAGTAGATATCAGTCCAATCCTGGACGTGATCATTGGACAGCCGTTAAGAATATTCTAAAATATCTTAGAAGAACAAAAGACTACATGCTTGTGTATGGTTCTAAGGATCTGATCCTTACTGGATACACGACTCCGATTTTCAATCTGATAAAGATGCTAGAAAGTCTACATCATGATTAG ATGTCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCAGAATTCCAAAAAGGGTCTGCTACCATACAGATATGAAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCCTCTGCTGTTGGGAGCCTGATGTATGCAATGTTATGTATTAGACCTGACATTTGCTATTTAGTAGGGATTGTTAGTAGATATCAGTCCAATCCTGGACGTGATCATTGGACAGCCGTTAAGAATATTCTAAAATATCTTAGAAGAACAAAAGACTACATGCTTGTGTATGGTTCTAAGGATCTGATCCTTACTGGATACACGACTCCGATTTTCAATCTGATAAAGATGCTAGAAAGTCTACATCATGATTAG MSQTSYIDKMLSRYKMQNSKKGLLPYRYEIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCIRPDICYLVGIVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTTPIFNLIKMLESLHHD Homology
BLAST of Cmc11g0303511 vs. NCBI nr
Match: TYK11050.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 237.3 bits (604), Expect = 7.9e-59 Identity = 116/128 (90.62%), Postives = 118/128 (92.19%), Query Frame = 0
BLAST of Cmc11g0303511 vs. NCBI nr
Match: KAA0067828.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 234.6 bits (597), Expect = 5.2e-58 Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0
BLAST of Cmc11g0303511 vs. NCBI nr
Match: TYK06159.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 234.2 bits (596), Expect = 6.7e-58 Identity = 115/128 (89.84%), Postives = 117/128 (91.41%), Query Frame = 0
BLAST of Cmc11g0303511 vs. NCBI nr
Match: KAA0025729.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 234.2 bits (596), Expect = 6.7e-58 Identity = 115/128 (89.84%), Postives = 117/128 (91.41%), Query Frame = 0
BLAST of Cmc11g0303511 vs. NCBI nr
Match: KAA0046768.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 232.6 bits (592), Expect = 2.0e-57 Identity = 115/128 (89.84%), Postives = 116/128 (90.62%), Query Frame = 0
BLAST of Cmc11g0303511 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 8.1e-30 Identity = 62/120 (51.67%), Postives = 84/120 (70.00%), Query Frame = 0
BLAST of Cmc11g0303511 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-12 Identity = 41/113 (36.28%), Postives = 60/113 (53.10%), Query Frame = 0
BLAST of Cmc11g0303511 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.2e-11 Identity = 29/63 (46.03%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of Cmc11g0303511 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.9e-07 Identity = 36/105 (34.29%), Postives = 49/105 (46.67%), Query Frame = 0
BLAST of Cmc11g0303511 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2) HSP 1 Score: 49.7 bits (117), Expect = 3.1e-05 Identity = 38/120 (31.67%), Postives = 56/120 (46.67%), Query Frame = 0
BLAST of Cmc11g0303511 vs. ExPASy TrEMBL
Match: A0A5D3CI71 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00330 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 3.8e-59 Identity = 116/128 (90.62%), Postives = 118/128 (92.19%), Query Frame = 0
BLAST of Cmc11g0303511 vs. ExPASy TrEMBL
Match: A0A5A7VJ67 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00350 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.5e-58 Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0
BLAST of Cmc11g0303511 vs. ExPASy TrEMBL
Match: A0A5A7SKC9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold653G00100 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 3.3e-58 Identity = 115/128 (89.84%), Postives = 117/128 (91.41%), Query Frame = 0
BLAST of Cmc11g0303511 vs. ExPASy TrEMBL
Match: A0A5D3C701 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00080 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 3.3e-58 Identity = 115/128 (89.84%), Postives = 117/128 (91.41%), Query Frame = 0
BLAST of Cmc11g0303511 vs. ExPASy TrEMBL
Match: A0A5A7U945 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G001000 PE=3 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 9.5e-58 Identity = 114/124 (91.94%), Postives = 115/124 (92.74%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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