Cmc11g0303471 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0303471
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionATP synthase subunit 9, mitochondrial
LocationCMiso1.1chr11: 24898571 .. 24898783 (-)
RNA-Seq ExpressionCmc11g0303471
SyntenyCmc11g0303471
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGAAGGTGTAAAATCAGTGGGTGTCGGAGCTACTATAATCGTTTCAGCGGGAGCTGCTGTCAGTATTGGAAACGTCTTTAGTTCATTGATCCATTCCGTGGTGCGAAATCCATCATTGGCTAAAAAATCATTTGGTTATGCAATTTTGGGCTTTGCTCTAATTGAAGCTATTGCATTGTTTGCTCTAATGATGGCCTTTTTGATCTAA

mRNA sequence

ATGTTAGAAGGTGTAAAATCAGTGGGTGTCGGAGCTACTATAATCGTTTCAGCGGGAGCTGCTGTCAGTATTGGAAACGTCTTTAGTTCATTGATCCATTCCGTGGTGCGAAATCCATCATTGGCTAAAAAATCATTTGGTTATGCAATTTTGGGCTTTGCTCTAATTGAAGCTATTGCATTGTTTGCTCTAATGATGGCCTTTTTGATCTAA

Coding sequence (CDS)

ATGTTAGAAGGTGTAAAATCAGTGGGTGTCGGAGCTACTATAATCGTTTCAGCGGGAGCTGCTGTCAGTATTGGAAACGTCTTTAGTTCATTGATCCATTCCGTGGTGCGAAATCCATCATTGGCTAAAAAATCATTTGGTTATGCAATTTTGGGCTTTGCTCTAATTGAAGCTATTGCATTGTTTGCTCTAATGATGGCCTTTTTGATCTAA

Protein sequence

MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIALFALMMAFLI
Homology
BLAST of Cmc11g0303471 vs. NCBI nr
Match: BBD20408.1 (ATP synthase subunit 9 [Allium cepa])

HSP 1 Score: 105.1 bits (261), Expect = 2.4e-19
Identity = 60/70 (85.71%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAAV IGNVFSSLIHSV RNPSLAK+SFGYAILGFAL EAIA
Sbjct: 12 MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA 71

Query: 61 LFALMMAFLI 71
          LFALMMAFLI
Sbjct: 72 LFALMMAFLI 81

BLAST of Cmc11g0303471 vs. NCBI nr
Match: BBD20369.1 (ATP synthase subunit 9 [Allium cepa])

HSP 1 Score: 105.1 bits (261), Expect = 2.4e-19
Identity = 60/70 (85.71%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAAV IGNVFSSLIHSV RNPSLAK+SFGYAILGFAL EAIA
Sbjct: 12 MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA 71

Query: 61 LFALMMAFLI 71
          LFALMMAFLI
Sbjct: 72 LFALMMAFLI 81

BLAST of Cmc11g0303471 vs. NCBI nr
Match: YP_009252189.1 (Atp9 [Allium cepa] >ANA91173.1 Atp9 [Allium cepa] >AYQ93871.1 ATP synthase subunit 9 [Allium cepa])

HSP 1 Score: 105.1 bits (261), Expect = 2.4e-19
Identity = 60/70 (85.71%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAAV IGNVFSSLIHSV RNPSLAK+SFGYAILGFAL EAIA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLI 71
          LFALMMAFLI
Sbjct: 61 LFALMMAFLI 70

BLAST of Cmc11g0303471 vs. NCBI nr
Match: BAA02855.2 (F0-ATPase subunit 9 [Brassica napus])

HSP 1 Score: 104.8 bits (260), Expect = 3.2e-19
Identity = 59/70 (84.29%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAA+ IGNVFSSLIHSV RNPSLAK+SFGYAILGFAL EAIA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLI 71
          LFALMMAFLI
Sbjct: 61 LFALMMAFLI 70

BLAST of Cmc11g0303471 vs. NCBI nr
Match: YP_004849343.1 (ATPase subunit 9 [Cucumis sativus] >ADZ10770.1 ATPase subunit 9 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 4.1e-19
Identity = 60/70 (85.71%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAAV IGNVFSSLIHSV RNPSLAK+SFGYAILGFAL EAIA
Sbjct: 1  MLEGAKSMGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLI 71
          LFALMMAFLI
Sbjct: 61 LFALMMAFLI 70

BLAST of Cmc11g0303471 vs. ExPASy Swiss-Prot
Match: P69420 (ATP synthase subunit 9, mitochondrial OS=Pisum sativum OX=3888 GN=ATP9 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.6e-21
Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAAV IGNVFSSLIHSV RNPSLAK+ FGYAILGFAL EAIA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLI 71
          LFALMMAFLI
Sbjct: 61 LFALMMAFLI 70

BLAST of Cmc11g0303471 vs. ExPASy Swiss-Prot
Match: P69421 (ATP synthase subunit 9, mitochondrial OS=Glycine max OX=3847 GN=ATP9 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.6e-21
Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAAV IGNVFSSLIHSV RNPSLAK+ FGYAILGFAL EAIA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLI 71
          LFALMMAFLI
Sbjct: 61 LFALMMAFLI 70

BLAST of Cmc11g0303471 vs. ExPASy Swiss-Prot
Match: P69422 (ATP synthase subunit 9, mitochondrial OS=Vicia faba OX=3906 GN=ATP9 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.6e-21
Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAAV IGNVFSSLIHSV RNPSLAK+ FGYAILGFAL EAIA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLI 71
          LFALMMAFLI
Sbjct: 61 LFALMMAFLI 70

BLAST of Cmc11g0303471 vs. ExPASy Swiss-Prot
Match: P60113 (ATP synthase subunit 9, mitochondrial OS=Brassica napus OX=3708 GN=ATP9 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.7e-21
Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAA+ IGNVFSSLIHSV RNPSLAK+SFGYAILGFAL EAIA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLI 71
          LFA MMAFLI
Sbjct: 61 LFAPMMAFLI 70

BLAST of Cmc11g0303471 vs. ExPASy Swiss-Prot
Match: P14571 (ATP synthase subunit 9, mitochondrial OS=Beta vulgaris OX=161934 GN=ATP9 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.0e-20
Identity = 57/70 (81.43%), Postives = 60/70 (85.71%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAA+ IGNVFSSLIHSV RNPSLAK+ FGYAILGFAL E IA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALSELIA 60

Query: 61 LFALMMAFLI 71
          LFALMMAFLI
Sbjct: 61 LFALMMAFLI 70

BLAST of Cmc11g0303471 vs. ExPASy TrEMBL
Match: A0A160DQR7 (ATP synthase subunit 9, mitochondrial OS=Allium cepa OX=4679 GN=atp9 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19
Identity = 60/70 (85.71%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAAV IGNVFSSLIHSV RNPSLAK+SFGYAILGFAL EAIA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLI 71
          LFALMMAFLI
Sbjct: 61 LFALMMAFLI 70

BLAST of Cmc11g0303471 vs. ExPASy TrEMBL
Match: A0A3Q9WJW7 (ATP synthase subunit 9, mitochondrial OS=Allium cepa OX=4679 GN=atp9 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19
Identity = 60/70 (85.71%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAAV IGNVFSSLIHSV RNPSLAK+SFGYAILGFAL EAIA
Sbjct: 12 MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA 71

Query: 61 LFALMMAFLI 71
          LFALMMAFLI
Sbjct: 72 LFALMMAFLI 81

BLAST of Cmc11g0303471 vs. ExPASy TrEMBL
Match: A0A387J002 (ATP synthase subunit 9, mitochondrial OS=Allium cepa OX=4679 GN=atp9 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19
Identity = 60/70 (85.71%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAAV IGNVFSSLIHSV RNPSLAK+SFGYAILGFAL EAIA
Sbjct: 12 MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA 71

Query: 61 LFALMMAFLI 71
          LFALMMAFLI
Sbjct: 72 LFALMMAFLI 81

BLAST of Cmc11g0303471 vs. ExPASy TrEMBL
Match: A0A5A7U949 (ATPase subunit 9 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75926G00010 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.0e-19
Identity = 60/70 (85.71%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAAV IGNVFSSLIHSV RNPSLAK+SFGYAILGFAL EAIA
Sbjct: 1  MLEGAKSMGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLI 71
          LFALMMAFLI
Sbjct: 61 LFALMMAFLI 70

BLAST of Cmc11g0303471 vs. ExPASy TrEMBL
Match: G3EU40 (ATP synthase subunit 9, mitochondrial OS=Cucumis melo subsp. melo OX=412675 GN=atp9 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.0e-19
Identity = 60/70 (85.71%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAAV IGNVFSSLIHSV RNPSLAK+SFGYAILGFAL EAIA
Sbjct: 1  MLEGAKSMGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLI 71
          LFALMMAFLI
Sbjct: 61 LFALMMAFLI 70

BLAST of Cmc11g0303471 vs. TAIR 10
Match: AT2G07671.1 (ATP synthase subunit C family protein )

HSP 1 Score: 102.1 bits (253), Expect = 1.9e-22
Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAA+ IGNVFSSLIHSV RNPSLAK+SFGYAILGFAL EAIA
Sbjct: 12 MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA 71

Query: 61 LFALMMAFLI 71
          LFA MMAFLI
Sbjct: 72 LFAPMMAFLI 81

BLAST of Cmc11g0303471 vs. TAIR 10
Match: ATMG01080.1 (mitochondrial F0-ATPase subunit 9 )

HSP 1 Score: 102.1 bits (253), Expect = 1.9e-22
Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAA+ IGNVFSSLIHSV RNPSLAK+SFGYAILGFAL EAIA
Sbjct: 12 MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA 71

Query: 61 LFALMMAFLI 71
          LFA MMAFLI
Sbjct: 72 LFAPMMAFLI 81

BLAST of Cmc11g0303471 vs. TAIR 10
Match: ATMG00040.1 (ATP synthase subunit C family protein )

HSP 1 Score: 61.6 bits (148), Expect = 2.9e-10
Identity = 37/64 (57.81%), Postives = 44/64 (68.75%), Query Frame = 0

Query: 1  MLEGVKSVGVGATIIVSAGAAVSIGNVFSSLIHSVVRNPSLAKKSFGYAILGFALIEAIA 60
          MLEG KS+G GA  I SAGAA+ IGNVFSSLIHSV RNPSLA  +    ++   L+  +A
Sbjct: 12 MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLATTT--VLVVTLTLLGGVA 71

Query: 61 LFAL 65
           F L
Sbjct: 72 AFYL 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BBD20408.12.4e-1985.71ATP synthase subunit 9 [Allium cepa][more]
BBD20369.12.4e-1985.71ATP synthase subunit 9 [Allium cepa][more]
YP_009252189.12.4e-1985.71Atp9 [Allium cepa] >ANA91173.1 Atp9 [Allium cepa] >AYQ93871.1 ATP synthase subun... [more]
BAA02855.23.2e-1984.29F0-ATPase subunit 9 [Brassica napus][more]
YP_004849343.14.1e-1985.71ATPase subunit 9 [Cucumis sativus] >ADZ10770.1 ATPase subunit 9 [Cucumis sativus... [more]
Match NameE-valueIdentityDescription
P694201.6e-2184.29ATP synthase subunit 9, mitochondrial OS=Pisum sativum OX=3888 GN=ATP9 PE=3 SV=1[more]
P694211.6e-2184.29ATP synthase subunit 9, mitochondrial OS=Glycine max OX=3847 GN=ATP9 PE=3 SV=1[more]
P694221.6e-2184.29ATP synthase subunit 9, mitochondrial OS=Vicia faba OX=3906 GN=ATP9 PE=3 SV=1[more]
P601132.7e-2182.86ATP synthase subunit 9, mitochondrial OS=Brassica napus OX=3708 GN=ATP9 PE=2 SV=... [more]
P145711.0e-2081.43ATP synthase subunit 9, mitochondrial OS=Beta vulgaris OX=161934 GN=ATP9 PE=3 SV... [more]
Match NameE-valueIdentityDescription
A0A160DQR71.2e-1985.71ATP synthase subunit 9, mitochondrial OS=Allium cepa OX=4679 GN=atp9 PE=3 SV=1[more]
A0A3Q9WJW71.2e-1985.71ATP synthase subunit 9, mitochondrial OS=Allium cepa OX=4679 GN=atp9 PE=3 SV=1[more]
A0A387J0021.2e-1985.71ATP synthase subunit 9, mitochondrial OS=Allium cepa OX=4679 GN=atp9 PE=3 SV=1[more]
A0A5A7U9492.0e-1985.71ATPase subunit 9 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
G3EU402.0e-1985.71ATP synthase subunit 9, mitochondrial OS=Cucumis melo subsp. melo OX=412675 GN=a... [more]
Match NameE-valueIdentityDescription
AT2G07671.11.9e-2282.86ATP synthase subunit C family protein [more]
ATMG01080.11.9e-2282.86mitochondrial F0-ATPase subunit 9 [more]
ATMG00040.12.9e-1057.81ATP synthase subunit C family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000454ATP synthase, F0 complex, subunit CPRINTSPR00124ATPASECcoord: 46..70
score: 55.84
coord: 29..44
score: 44.24
coord: 8..27
score: 36.37
IPR000454ATP synthase, F0 complex, subunit CPANTHERPTHR10031ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIALcoord: 1..70
IPR002379V-ATPase proteolipid subunit C-like domainPFAMPF00137ATP-synt_Ccoord: 9..70
e-value: 1.2E-10
score: 41.5
IPR038662F1F0 ATP synthase subunit C superfamilyGENE3D1.20.20.10F1F0 ATP synthase subunit Ccoord: 3..70
e-value: 1.4E-22
score: 81.6
NoneNo IPR availablePANTHERPTHR10031:SF38ATP SYNTHASE SUBUNIT 9, MITOCHONDRIALcoord: 1..70
NoneNo IPR availableCDDcd18182ATP-synt_Fo_c_ATP5G3coord: 6..70
e-value: 2.3136E-17
score: 66.3791
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 1..70
score: 8.59137
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 3..70

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0303471.1Cmc11g0303471.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:1902600 proton transmembrane transport
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0022857 transmembrane transporter activity