Cmc11g0303131 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0303131
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr11: 24493734 .. 24495916 (-)
RNA-Seq Expression	Cmc11g0303131
Synteny	Cmc11g0303131

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACAGACGATTGGGACGGGTTGCAAAGTGGGCAGATTGTTTGAGCTTCTATCACTTCAGGTTCCTCCTCCATCCATCTCTGCCCCTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTCATGCTTCTCCAGAAAAATTGTGTCATTTAATCTCCATTAACAATTTAAATAGTATTACCAAATTTGTCCCTTTTAATTGTTTAAATTGCAAACTTGCTAAGGAACCTGCTTTGTCATTTTCTAAATCCACTTCTATTTGTGATAAACCTTTTGATTTAATCCATTCTGACATCTGGGGGCCTGGCCCTACCTCCACTGTCCATGGTTATCGTTATTATGTGTTATTCATTGATGATTTCTCTCGATTTACATGGATTTACTTTCTCAAACACCGCTCTGAATTATCTCGCACTTATATTGAGTTTGCTAATATGATTCGTACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACTGACAATGCCTTGGAATATAAAGACTCCACTCTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAGCGCTCCTGCCCTCACACTTCCCAACAAAATGGACGTGCTGAGCGCAAACATCGCCACATTCTTGACTCAGTTCGTGCCCTTCTTCTTTCTGCCTCATGTCCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCCGTCTATACTATTAATCGTCTTCCTTCCTCCGTCCTTCAAAACATCTCTCCATTCGAAAGACTATATGGTACTCCTCCTAACTATTCCAACCTTAAAGTCTTTGGTTGTGCTTGTTTTGTTCTCCTGCATCCTCATGAACACACTAAACTTGAACCTCGTGCCCGCCGCTACTGTTTTCTTGGCTATGGCACAAAACATAAAGGTTTTCGTTGTTGGGATCTCCTTTCCAACAGACTTCGTATATCTCGCCATGTCACATTTTGGGAGCACACTATGTTCTCTCGTTTATCCTCCTTCCACGCCTCCTTCTCTAGTCCTCAATCTTTCTTCACTGACACATCTATTGATCTTTTTCCTCTCTCTGAGTCCACTCCTGATAATGAGCTTGCTCAATCTGCACTTACTTCTGCAACCTCGGACCAGTCGTCCATCTCTGATGGGAATTCTGACCCTCCTCCAGACATCCCTCCTCGTCGTTCTACTCGGGTAAGGGAACCTCCTATTCATCTCCAAGATTATCACTGTTTCTCTACTATTGTTTCTCTTATTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACGGGCTCTTGAAAAGACGCACACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTGACTGAAGTGGATCTACAAAATCAAGACTCACTCTGATGGTACTATTGAGCGTTATAAGGCTCGTCTTGTAGCAAAAGGGTATTCCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCCTGTGGCTCAGATGACGTCTGTACGTAGTTTACTAGCTGTTGCTGCTGCCAAGCAGTGGCCTCTTCTTCAAATGGATGTCAAAAATGCTTTCCTTAATTGGACTCTTTCTGAAGAAGTGTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCATAAGGTGTGCCTCTTGCGTCGCGCACTATATGGTCTCAAACAGGCTTCACGAGCTTGGTTTGCCACGTTTAGCTCTACCATCACTCAACTTGGCTTTACTTCCAGTCCTCATGATACTGCACTCTTTACTCGTCACACATCCCAGGGTATTGTTCTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAGGCCATATCCGATCTCCAACACTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGGTCTCTCAACTACTTTCTTGGTCTTGAAGTCTCTTGGCGCTCAGACGGGTATCTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCCCGCTCAGGAATTACTGACTCTAACACAGCTTCAACGCCGTTAGATCCCAACGTTCATTTAACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTTTGTATCGGCAACTCGTTGGCAGTCTCATCTATCTAACAGTGACTCACCCAGATATTGCATATGCTGTTCACATTGTTAGCTAA

mRNA sequence

ATGGAACAGACGATTGGGACGGGTTGCAAAGTGGGCAGATTGTTTGAGCTTCTATCACTTCAGGTTCCTCCTCCATCCATCTCTGCCCCTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTCATGCTTCTCCAGAAAAATTGTGTCATTTAATCTCCATTAACAATTTAAATAGTATTACCAAATTTGTCCCTTTTAATTGTTTAAATTGCAAACTTGCTAAGGAACCTGCTTTGTCATTTTCTAAATCCACTTCTATTTGTGATAAACCTTTTGATTTAATCCATTCTGACATCTGGGGGCCTGGCCCTACCTCCACTGTCCATGGTTATCGTTATTATGTGTTATTCATTGATGATTTCTCTCGATTTACATGGATTTACTTTCTCAAACACCGCTCTGAATTATCTCGCACTTATATTGAGTTTGCTAATATGATTCGTACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACTGACAATGCCTTGGAATATAAAGACTCCACTCTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAGCGCTCCTGCCCTCACACTTCCCAACAAAATGGACGTGCTGAGCGCAAACATCGCCACATTCTTGACTCAGTTCGTGCCCTTCTTCTTTCTGCCTCATGTCCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCCGTCTATACTATTAATCGTCTTCCTTCCTCCGTCCTTCAAAACATCTCTCCATTCGAAAGACTATATGGTACTCCTCCTAACTATTCCAACCTTAAAGTCTTTGGTTGTGCTTGTTTTGTTCTCCTGCATCCTCATGAACACACTAAACTTGAACCTCGTGCCCGCCGCTACTGTTTTCTTGGCTATGGCACAAAACATAAAGGTTTTCGTTGTTGGGATCTCCTTTCCAACAGACTTCGTATATCTCGCCATGTCACATTTTGGGAGCACACTATGTTCTCTCGTTTATCCTCCTTCCACGCCTCCTTCTCTAGTCCTCAATCTTTCTTCACTGACACATCTATTGATCTTTTTCCTCTCTCTGAGTCCACTCCTGATAATGAGCTTGCTCAATCTGCACTTACTTCTGCAACCTCGGACCAGTCGTCCATCTCTGATGGGAATTCTGACCCTCCTCCAGACATCCCTCCTCGTCGTTCTACTCGGGTAAGGGAACCTCCTATTCATCTCCAAGATTATCACTGTTTCTCTACTATTGTTTCTCTTATTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACGGGCTCTTGAAAAGACGCACACTTGGGACTATGTTGACTTACCTCCTGGGTATTCCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCCTGTGGCTCAGATGACGTCTGTACGTAGTTTACTAGCTGTTGCTGCTGCCAAGCAGTGGCCTCTTCTTCAAATGGATGTCAAAAATGCTTTCCTTAATTGGACTCTTTCTGAAGAAGTGTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCATAAGGTGTGCCTCTTGCGTCGCGCACTATATGGTCTCAAACAGGCTTCACGAGCTTGGTTTGCCACGTTTAGCTCTACCATCACTCAACTTGGCTTTACTTCCAGTCCTCATGATACTGCACTCTTTACTCGTCACACATCCCAGGGTATTGTTCTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAGGCCATATCCGATCTCCAACACTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGGTCTCTCAACTACTTTCTTGGTCTTGAAGTCTCTTGGCGCTCAGACGGGTATCTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCCCGCTCAGGAATTACTGACTCTAACACAGCTTCAACGCCGTTAGATCCCAACGTTCATTTAACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTTTGTATCGGCAACTCGTTGGCAGTCTCATCTATCTAACAGTGACTCACCCAGATATTGCATATGCTGTTCACATTGTTAGCTAA

Coding sequence (CDS)

ATGGAACAGACGATTGGGACGGGTTGCAAAGTGGGCAGATTGTTTGAGCTTCTATCACTTCAGGTTCCTCCTCCATCCATCTCTGCCCCTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTCATGCTTCTCCAGAAAAATTGTGTCATTTAATCTCCATTAACAATTTAAATAGTATTACCAAATTTGTCCCTTTTAATTGTTTAAATTGCAAACTTGCTAAGGAACCTGCTTTGTCATTTTCTAAATCCACTTCTATTTGTGATAAACCTTTTGATTTAATCCATTCTGACATCTGGGGGCCTGGCCCTACCTCCACTGTCCATGGTTATCGTTATTATGTGTTATTCATTGATGATTTCTCTCGATTTACATGGATTTACTTTCTCAAACACCGCTCTGAATTATCTCGCACTTATATTGAGTTTGCTAATATGATTCGTACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACTGACAATGCCTTGGAATATAAAGACTCCACTCTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAGCGCTCCTGCCCTCACACTTCCCAACAAAATGGACGTGCTGAGCGCAAACATCGCCACATTCTTGACTCAGTTCGTGCCCTTCTTCTTTCTGCCTCATGTCCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCCGTCTATACTATTAATCGTCTTCCTTCCTCCGTCCTTCAAAACATCTCTCCATTCGAAAGACTATATGGTACTCCTCCTAACTATTCCAACCTTAAAGTCTTTGGTTGTGCTTGTTTTGTTCTCCTGCATCCTCATGAACACACTAAACTTGAACCTCGTGCCCGCCGCTACTGTTTTCTTGGCTATGGCACAAAACATAAAGGTTTTCGTTGTTGGGATCTCCTTTCCAACAGACTTCGTATATCTCGCCATGTCACATTTTGGGAGCACACTATGTTCTCTCGTTTATCCTCCTTCCACGCCTCCTTCTCTAGTCCTCAATCTTTCTTCACTGACACATCTATTGATCTTTTTCCTCTCTCTGAGTCCACTCCTGATAATGAGCTTGCTCAATCTGCACTTACTTCTGCAACCTCGGACCAGTCGTCCATCTCTGATGGGAATTCTGACCCTCCTCCAGACATCCCTCCTCGTCGTTCTACTCGGGTAAGGGAACCTCCTATTCATCTCCAAGATTATCACTGTTTCTCTACTATTGTTTCTCTTATTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACGGGCTCTTGAAAAGACGCACACTTGGGACTATGTTGACTTACCTCCTGGGTATTCCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCCTGTGGCTCAGATGACGTCTGTACGTAGTTTACTAGCTGTTGCTGCTGCCAAGCAGTGGCCTCTTCTTCAAATGGATGTCAAAAATGCTTTCCTTAATTGGACTCTTTCTGAAGAAGTGTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCATAAGGTGTGCCTCTTGCGTCGCGCACTATATGGTCTCAAACAGGCTTCACGAGCTTGGTTTGCCACGTTTAGCTCTACCATCACTCAACTTGGCTTTACTTCCAGTCCTCATGATACTGCACTCTTTACTCGTCACACATCCCAGGGTATTGTTCTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAGGCCATATCCGATCTCCAACACTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGGTCTCTCAACTACTTTCTTGGTCTTGAAGTCTCTTGGCGCTCAGACGGGTATCTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCCCGCTCAGGAATTACTGACTCTAACACAGCTTCAACGCCGTTAGATCCCAACGTTCATTTAACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTTTGTATCGGCAACTCGTTGGCAGTCTCATCTATCTAACAGTGACTCACCCAGATATTGCATATGCTGTTCACATTGTTAGCTAA

Protein sequence

MEQTIGTGCKVGRLFELLSLQVPPPSISAPVTDSDTYQWHLRLGHASPEKLCHLISINNLNSITKFVPFNCLNCKLAKEPALSFSKSTSICDKPFDLIHSDIWGPGPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARRYCFLGYGTKHKGFRCWDLLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPDNELAQSALTSATSDQSSISDGNSDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELRALEKTHTWDYVDLPPGYSQEYGIDYEETFAPVAQMTSVRSLLAVAAAKQWPLLQMDVKNAFLNWTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQASRAWFATFSSTITQLGFTSSPHDTALFTRHTSQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSWRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVS

Homology

[Close]

BLAST of Cmc11g0303131 vs. NCBI nr
Match: KAA0041601.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0065379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK12000.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1339.3 bits (3465), Expect = 0.0e+00
Identity = 670/725 (92.41%), Postives = 675/725 (93.10%), Query Frame = 0


Query: 3    QTIGTGCKVGRLFELLSLQVPPPSISAPVTDSDTYQWHLRLGHASPEKLCHLISINNLNS 62
            QTIGTG KVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLGHASPEKL HLISINNLNS
Sbjct: 414  QTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNS 473

Query: 63   ITKFVPFNCLNCKLAKEPALSFSKSTSICDKPFDLIHSDIWGPGPTSTVHGYRYYVLFID 122
            ITKFVPFNCLNCKLAK+PALSFS STSICDKPFDLIHSDIWGP PTSTVHGYRYYVLFID
Sbjct: 474  ITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFID 533

Query: 123  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 182
            DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG
Sbjct: 534  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 593

Query: 183  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 242
            TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV
Sbjct: 594  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 653

Query: 243  LQNISPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARRYCFLGYGTKHKGFRC 302
            LQNISPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRAR  CFLGYGT+HKGFRC
Sbjct: 654  LQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRC 713

Query: 303  WDLLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPDNELAQ 362
            WD LSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTP NELAQ
Sbjct: 714  WDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQ 773

Query: 363  SALTSATSDQSSISDGNSDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 422
            SA TSATSDQSSISDGN DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA
Sbjct: 774  SAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 833

Query: 423  STDPLWQKAMNDELRALEKTHTWDYVDLPP------------------------------ 482
            STDPLWQKAMNDEL+ALEK HTWDYVDLPP                              
Sbjct: 834  STDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA 893

Query: 483  -GYSQEYGIDYEETFAPVAQMTSVRSLLAVAAAKQWPLLQMDVKNAFLNWTLSEEVYMKP 542
             GYSQEYGIDYEETFAPVA+MTSVRSLLAVAAAKQWPLLQMDVKNAFLN TLSEEVYMKP
Sbjct: 894  KGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKP 953

Query: 543  PPGTSSPPHKVCLLRRALYGLKQASRAWFATFSSTITQLGFTSSPHDTALFTRHTSQGIV 602
            PPGTSSPPHKVCLLRRALYGLKQA RAWFATFSSTITQLGFTSSPHDTALFTRHT QGIV
Sbjct: 954  PPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIV 1013

Query: 603  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSWRSDGYLLSQAKY 662
            LLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKY
Sbjct: 1014 LLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 1073

Query: 663  ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYA 697
            ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVGSLIYLTVT PDIAYA
Sbjct: 1074 ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYA 1133

[Close]

BLAST of Cmc11g0303131 vs. NCBI nr
Match: TYK04714.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1339.3 bits (3465), Expect = 0.0e+00
Identity = 670/725 (92.41%), Postives = 675/725 (93.10%), Query Frame = 0


Query: 3    QTIGTGCKVGRLFELLSLQVPPPSISAPVTDSDTYQWHLRLGHASPEKLCHLISINNLNS 62
            QTIGTG KVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLGHASPEKL HLISINNLNS
Sbjct: 414  QTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNS 473

Query: 63   ITKFVPFNCLNCKLAKEPALSFSKSTSICDKPFDLIHSDIWGPGPTSTVHGYRYYVLFID 122
            ITKFVPFNCLNCKLAK+PALSFS STSICDKPFDLIHSDIWGP PTSTVHGYRYYVLFID
Sbjct: 474  ITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFID 533

Query: 123  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 182
            DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG
Sbjct: 534  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 593

Query: 183  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 242
            TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV
Sbjct: 594  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 653

Query: 243  LQNISPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARRYCFLGYGTKHKGFRC 302
            LQNISPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRAR  CFLGYGT+HKGFRC
Sbjct: 654  LQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRC 713

Query: 303  WDLLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPDNELAQ 362
            WD LSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTP NELAQ
Sbjct: 714  WDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQ 773

Query: 363  SALTSATSDQSSISDGNSDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 422
            SA TSATSDQSSISDGN DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA
Sbjct: 774  SAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 833

Query: 423  STDPLWQKAMNDELRALEKTHTWDYVDLPP------------------------------ 482
            STDPLWQKAMNDEL+ALEK HTWDYVDLPP                              
Sbjct: 834  STDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA 893

Query: 483  -GYSQEYGIDYEETFAPVAQMTSVRSLLAVAAAKQWPLLQMDVKNAFLNWTLSEEVYMKP 542
             GYSQEYGIDYEETFAPVA+MTSVRSLLAVAAAKQWPLLQMDVKNAFLN TLSEEVYMKP
Sbjct: 894  KGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKP 953

Query: 543  PPGTSSPPHKVCLLRRALYGLKQASRAWFATFSSTITQLGFTSSPHDTALFTRHTSQGIV 602
            PPGTSSPPHKVCLLRRALYGLKQA RAWFATFSSTITQLGFTSSPHDTALFTRHT QGIV
Sbjct: 954  PPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIV 1013

Query: 603  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSWRSDGYLLSQAKY 662
            LLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKY
Sbjct: 1014 LLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 1073

Query: 663  ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYA 697
            ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVGSLIYLTVT PDIAYA
Sbjct: 1074 ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYA 1133

[Close]

BLAST of Cmc11g0303131 vs. NCBI nr
Match: KAA0037745.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1338.2 bits (3462), Expect = 0.0e+00
Identity = 669/725 (92.28%), Postives = 675/725 (93.10%), Query Frame = 0


Query: 3    QTIGTGCKVGRLFELLSLQVPPPSISAPVTDSDTYQWHLRLGHASPEKLCHLISINNLNS 62
            QTIGTG KVGRLFE+LSLQVP PSISAPVTDSDTYQWHLRLGHASPEKL HLISINNLNS
Sbjct: 414  QTIGTGRKVGRLFEVLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNS 473

Query: 63   ITKFVPFNCLNCKLAKEPALSFSKSTSICDKPFDLIHSDIWGPGPTSTVHGYRYYVLFID 122
            ITKFVPFNCLNCKLAK+PALSFS STSICDKPFDLIHSDIWGP PTSTVHGYRYYVLFID
Sbjct: 474  ITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFID 533

Query: 123  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 182
            DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG
Sbjct: 534  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 593

Query: 183  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 242
            TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV
Sbjct: 594  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 653

Query: 243  LQNISPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARRYCFLGYGTKHKGFRC 302
            LQNISPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRAR  CFLGYGT+HKGFRC
Sbjct: 654  LQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRC 713

Query: 303  WDLLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPDNELAQ 362
            WD LSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTP NELAQ
Sbjct: 714  WDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQ 773

Query: 363  SALTSATSDQSSISDGNSDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 422
            SA TSATSDQSSISDGN DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA
Sbjct: 774  SAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 833

Query: 423  STDPLWQKAMNDELRALEKTHTWDYVDLPP------------------------------ 482
            STDPLWQKAMNDEL+ALEK HTWDYVDLPP                              
Sbjct: 834  STDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA 893

Query: 483  -GYSQEYGIDYEETFAPVAQMTSVRSLLAVAAAKQWPLLQMDVKNAFLNWTLSEEVYMKP 542
             GYSQEYGIDYEETFAPVA+MTSVRSLLAVAAAKQWPLLQMDVKNAFLN TLSEEVYMKP
Sbjct: 894  KGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKP 953

Query: 543  PPGTSSPPHKVCLLRRALYGLKQASRAWFATFSSTITQLGFTSSPHDTALFTRHTSQGIV 602
            PPGTSSPPHKVCLLRRALYGLKQA RAWFATFSSTITQLGFTSSPHDTALFTRHT QGIV
Sbjct: 954  PPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIV 1013

Query: 603  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSWRSDGYLLSQAKY 662
            LLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKY
Sbjct: 1014 LLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 1073

Query: 663  ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYA 697
            ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVGSLIYLTVT PDIAYA
Sbjct: 1074 ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYA 1133

[Close]

BLAST of Cmc11g0303131 vs. NCBI nr
Match: TYK19656.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1336.6 bits (3458), Expect = 0.0e+00
Identity = 668/723 (92.39%), Postives = 673/723 (93.08%), Query Frame = 0


Query: 3    QTIGTGCKVGRLFELLSLQVPPPSISAPVTDSDTYQWHLRLGHASPEKLCHLISINNLNS 62
            QTIGTG KVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLGHASPEKL HLISINNLNS
Sbjct: 414  QTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNS 473

Query: 63   ITKFVPFNCLNCKLAKEPALSFSKSTSICDKPFDLIHSDIWGPGPTSTVHGYRYYVLFID 122
            ITKFVPFNCLNCKLAK+PALSFS STSICDKPFDLIHSDIWGP PTSTVHGYRYYVLFID
Sbjct: 474  ITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFID 533

Query: 123  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 182
            DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG
Sbjct: 534  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 593

Query: 183  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 242
            TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV
Sbjct: 594  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 653

Query: 243  LQNISPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARRYCFLGYGTKHKGFRC 302
            LQNISPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRAR  CFLGYGT+HKGFRC
Sbjct: 654  LQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRC 713

Query: 303  WDLLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPDNELAQ 362
            WD LSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTP NELAQ
Sbjct: 714  WDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQ 773

Query: 363  SALTSATSDQSSISDGNSDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 422
            SA TSATSDQSSISDGN DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA
Sbjct: 774  SAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 833

Query: 423  STDPLWQKAMNDELRALEKTHTWDYVDLPP------------------------------ 482
            STDPLWQKAMNDEL+ALEK HTWDYVDLPP                              
Sbjct: 834  STDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA 893

Query: 483  -GYSQEYGIDYEETFAPVAQMTSVRSLLAVAAAKQWPLLQMDVKNAFLNWTLSEEVYMKP 542
             GYSQEYGIDYEETFAPVA+MTSVRSLLAVAAAKQWPLLQMDVKNAFLN TLSEEVYMKP
Sbjct: 894  KGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKP 953

Query: 543  PPGTSSPPHKVCLLRRALYGLKQASRAWFATFSSTITQLGFTSSPHDTALFTRHTSQGIV 602
            PPGTSSPPHKVCLLRRALYGLKQA RAWFATFSSTITQLGFTSSPHDTALFTRHT QGIV
Sbjct: 954  PPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIV 1013

Query: 603  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSWRSDGYLLSQAKY 662
            LLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKY
Sbjct: 1014 LLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 1073

Query: 663  ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYA 695
            ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVGSLIYLTVT PDIAYA
Sbjct: 1074 ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYA 1133

[Close]

BLAST of Cmc11g0303131 vs. NCBI nr
Match: KAA0057254.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1335.5 bits (3455), Expect = 0.0e+00
Identity = 664/700 (94.86%), Postives = 670/700 (95.71%), Query Frame = 0


Query: 3    QTIGTGCKVGRLFELLSLQVPPPSISAPVTDSDTYQWHLRLGHASPEKLCHLISINNLNS 62
            QTIGTG KVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLGHASPEKL HLISINNLNS
Sbjct: 414  QTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNS 473

Query: 63   ITKFVPFNCLNCKLAKEPALSFSKSTSICDKPFDLIHSDIWGPGPTSTVHGYRYYVLFID 122
            ITKFVPFNCLNCKLAK+P LSFS STSICDKPFDLIHSDIWGP PTSTVHGYRYYVLFID
Sbjct: 474  ITKFVPFNCLNCKLAKQPVLSFSTSTSICDKPFDLIHSDIWGPTPTSTVHGYRYYVLFID 533

Query: 123  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 182
            DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG
Sbjct: 534  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 593

Query: 183  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 242
            TLVQRSCPHTSQQNGRAERKHRHILD VR LLLSASCPEKFWGEAALTSVYTINRLPSSV
Sbjct: 594  TLVQRSCPHTSQQNGRAERKHRHILDLVRGLLLSASCPEKFWGEAALTSVYTINRLPSSV 653

Query: 243  LQNISPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARRYCFLGYGTKHKGFRC 302
            LQNISPFERLYG PPNYSNLKVFGCACFVLL PHEHTKLEPRAR  CFLGYGT+HKGFRC
Sbjct: 654  LQNISPFERLYGNPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRC 713

Query: 303  WDLLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPDNELAQ 362
            WD LSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTP NELAQ
Sbjct: 714  WDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQ 773

Query: 363  SALTSATSDQSSISDGNSDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 422
            SA TSATSDQSSISDGN DPPPDIPPRRSTRVREPPIHLQDYH FSTIVSLIEPTSYQEA
Sbjct: 774  SAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHYFSTIVSLIEPTSYQEA 833

Query: 423  STDPLWQKAMNDELRALEKTHTWDYVDLPPG------YSQEYGIDYEETFAPVAQMTSVR 482
            STDPLWQKAMNDEL+ALEK HTWDYVDLPPG      YSQEYGIDYEETFAPVA+MTSVR
Sbjct: 834  STDPLWQKAMNDELQALEKMHTWDYVDLPPGSACSKRYSQEYGIDYEETFAPVARMTSVR 893

Query: 483  SLLAVAAAKQWPLLQMDVKNAFLNWTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAS 542
            SLLAVAAAKQWPLLQMDVKNAFLN TLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQA 
Sbjct: 894  SLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAP 953

Query: 543  RAWFATFSSTITQLGFTSSPHDTALFTRHTSQGIVLLLLYVDDMIITGNDPQAISDLQHY 602
            RAWFATFSSTITQLGFTSSPHDT LFTRHT QGIVLLLLYVDDMIITGNDP+AISDLQHY
Sbjct: 954  RAWFATFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPRAISDLQHY 1013

Query: 603  LGQHFEMKDLGSLNYFLGLEVSWRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVH 662
            LGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVH
Sbjct: 1014 LGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVH 1073

Query: 663  LTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVS 697
            LTPYDGVPLE+VSLYRQLVGSLIYLTVT PDIAYAVHIVS
Sbjct: 1074 LTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVS 1113

[Close]

BLAST of Cmc11g0303131 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 4.6e-121
Identity = 292/825 (35.39%), Postives = 408/825 (49.45%), Query Frame = 0


Query: 23   PPPSISAPVTDSDTYQWHLRLGHASPEKLCHLI---SINNLNSITKFVPFNCLNCKLAKE 82
            P    ++P + +    WH RLGH +P  L  +I   S++ LN   KF+  +C +C + K 
Sbjct: 451  PVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFL--SCSDCLINKS 510

Query: 83   PALSFSKSTSICDKPFDLIHSDIWGPGPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSEL 142
              + FS+ST    +P + I+SD+W   P  +   YRYYV+F+D F+R+TW+Y LK +S++
Sbjct: 511  NKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQV 570

Query: 143  SRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRA 202
              T+I F N++  +F   I T  +DN  E+    L  + SQ G     S PHT + NG +
Sbjct: 571  KETFITFKNLLENRFQTRIGTFYSDNGGEF--VALWEYFSQHGISHLTSPPHTPEHNGLS 630

Query: 203  ERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNY 262
            ERKHRHI+++   LL  AS P+ +W  A   +VY INRLP+ +LQ  SPF++L+GT PNY
Sbjct: 631  ERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNY 690

Query: 263  SNLKVFGCACFVLLHPHEHTKLEPRARRYCFLGYGTKHKGFRCWDLLSNRLRISRHVTFW 322
              L+VFGCAC+  L P+   KL+ ++R+  FLGY      + C  L ++RL ISRHV F 
Sbjct: 691  DKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFD 750

Query: 323  E----------------------------HTMF--------------------------- 382
            E                            HT                             
Sbjct: 751  ENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSA 810

Query: 383  ---------SRL-SSFHASFSS-------------PQSFFTDTSIDLFP---LSESTPDN 442
                     S L SSF +SF S             P +  T T          S++ P N
Sbjct: 811  PFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTN 870

Query: 443  E----LAQSALTSATSDQSS-------ISDGNSDPPPDI---PPRRSTRV----REPPIH 502
            E    LAQS  T A S  SS        S   S  PP I   PP    ++     + P++
Sbjct: 871  ESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLN 930

Query: 503  ------------LQDYHCFSTIVSLI---EPTSYQEASTDPLWQKAMNDELRALEKTHTW 562
                        ++    +S  VSL    EP +  +A  D  W+ AM  E+ A    HTW
Sbjct: 931  THSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTW 990

Query: 563  DYVDLPP--------------------------------GYSQEYGIDYEETFAPVAQMT 622
            D V  PP                                GY+Q  G+DY ETF+PV + T
Sbjct: 991  DLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKST 1050

Query: 623  SVRSLLAVAAAKQWPLLQMDVKNAFLNWTLSEEVYMKPPPG--TSSPPHKVCLLRRALYG 682
            S+R +L VA  + WP+ Q+DV NAFL  TL+++VYM  PPG      P+ VC LR+ALYG
Sbjct: 1051 SIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYG 1110

Query: 683  LKQASRAWFATFSSTITQLGFTSSPHDTALFTRHTSQGIVLLLLYVDDMIITGNDPQAIS 697
            LKQA RAW+    + +  +GF +S  DT+LF     + IV +L+YVDD++ITGNDP  + 
Sbjct: 1111 LKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLH 1170

[Close]

BLAST of Cmc11g0303131 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 9.9e-116
Identity = 272/822 (33.09%), Postives = 398/822 (48.42%), Query Frame = 0


Query: 28   SAPVTDSDTYQWHLRLGHASPEKLCHLISINNLNSIT-KFVPFNCLNCKLAKEPALSFSK 87
            ++P + +    WH RLGH S   L  +IS ++L  +       +C +C + K   + FS 
Sbjct: 435  ASPCSKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSN 494

Query: 88   STSICDKPFDLIHSDIWGPGPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEF 147
            ST    KP + I+SD+W   P  ++  YRYYV+F+D F+R+TW+Y LK +S++  T+I F
Sbjct: 495  STITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIF 554

Query: 148  ANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHI 207
             +++  +F   I TL +DN  E+    L  +LSQ G     S PHT + NG +ERKHRHI
Sbjct: 555  KSLVENRFQTRIGTLYSDNGGEF--VVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHI 614

Query: 208  LDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFG 267
            ++    LL  AS P+ +W  A   +VY INRLP+ +LQ  SPF++L+G PPNY  LKVFG
Sbjct: 615  VEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFG 674

Query: 268  CACFVLLHPHEHTKLEPRARRYCFLGYGTKHKGFRCWDLLSNRLRISRHVTFWEHTMFSR 327
            CAC+  L P+   KLE ++++  F+GY      + C  + + RL  SRHV F E      
Sbjct: 675  CACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFS 734

Query: 328  LSSFHASFSSPQ------SFFTDTSIDLFPLSESTP------------------------ 387
             ++F  S S  Q      ++ + T++   PL    P                        
Sbjct: 735  TTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQ 794

Query: 388  --DNELAQSALTSATSD-----------------QSSISDGNS---------DPPPDIP- 447
               + L  S+++S +S                  Q+  S+ NS          P P+ P 
Sbjct: 795  VSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPN 854

Query: 448  ---------------PRRSTRVREP-----------------------------PIHL-- 507
                           P  ST + EP                             P++   
Sbjct: 855  QNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHS 914

Query: 508  -------------QDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELRALEKTHTWDYV 567
                         Q Y   +++ +  EP +  +A  D  W++AM  E+ A    HTWD V
Sbjct: 915  MATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLV 974

Query: 568  DLPP--------------------------------GYSQEYGIDYEETFAPVAQMTSVR 627
              PP                                GY+Q  G+DY ETF+PV + TS+R
Sbjct: 975  PPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIR 1034

Query: 628  SLLAVAAAKQWPLLQMDVKNAFLNWTLSEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQ 687
             +L VA  + WP+ Q+DV NAFL  TL++EVYM  PPG      P  VC LR+A+YGLKQ
Sbjct: 1035 IVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQ 1094

Query: 688  ASRAWFATFSSTITQLGFTSSPHDTALFTRHTSQGIVLLLLYVDDMIITGNDPQAISDLQ 697
            A RAW+    + +  +GF +S  DT+LF     + I+ +L+YVDD++ITGND   +    
Sbjct: 1095 APRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTL 1154

[Close]

BLAST of Cmc11g0303131 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 9.7e-87
Identity = 239/720 (33.19%), Postives = 352/720 (48.89%), Query Frame = 0


Query: 39   WHLRLGHASPEKLCHLISINNLNSITKFVPFN-CLNCKLAKEPALSFSKSTSICDKPFDL 98
            WH R+GH S EK   +++  +L S  K      C  C   K+  +SF  S+       DL
Sbjct: 425  WHKRMGHMS-EKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDL 484

Query: 99   IHSDIWGPGPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCP 158
            ++SD+ GP    ++ G +Y+V FIDD SR  W+Y LK + ++ + + +F  ++  +    
Sbjct: 485  VYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRK 544

Query: 159  IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 218
            +K LR+DN  EY       + S  G   +++ P T Q NG AER +R I++ VR++L  A
Sbjct: 545  LKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMA 604

Query: 219  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLHPHE 278
              P+ FWGEA  T+ Y INR PS  L    P         +YS+LKVFGC  F  +   +
Sbjct: 605  KLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQ 664

Query: 279  HTKLEPRARRYCFLGYGTKHKGFRCWDLLSNRLRISRHVTFWEHTMFSRLS-SFHASFSS 338
             TKL+ ++    F+GYG +  G+R WD +  ++  SR V F E  + +    S       
Sbjct: 665  RTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGI 724

Query: 339  PQSFFTDTSIDLFPLS-ESTPDNELAQSALTSATSDQ--------SSISDGNSDPPPDIP 398
              +F T  S    P S EST D    Q        +Q          +           P
Sbjct: 725  IPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQP 784

Query: 399  PRRSTRVREPPIHLQDYHCFSTIVSLI----EPTSYQEASTDP---LWQKAMNDELRALE 458
             RRS R   P +  + Y   ST   LI    EP S +E  + P      KAM +E+ +L+
Sbjct: 785  LRRSER---PRVESRRYP--STEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQ 844

Query: 459  KTHTWDYVDLP-------------------------------PGYSQEYGIDYEETFAPV 518
            K  T+  V+LP                                G+ Q+ GID++E F+PV
Sbjct: 845  KNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPV 904

Query: 519  AQMTSVRSLLAVAAAKQWPLLQMDVKNAFLNWTLSEEVYMKPPPG--TSSPPHKVCLLRR 578
             +MTS+R++L++AA+    + Q+DVK AFL+  L EE+YM+ P G   +   H VC L +
Sbjct: 905  VKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNK 964

Query: 579  ALYGLKQASRAWFATFSSTITQLGFTSSPHDTAL-FTRHTSQGIVLLLLYVDDMIITGND 638
            +LYGLKQA R W+  F S +    +  +  D  + F R +    ++LLLYVDDM+I G D
Sbjct: 965  SLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKD 1024

Query: 639  PQAISDLQHYLGQHFEMKDLGSLNYFLGLEV--SWRSDGYLLSQAKYASDLLARSGITDS 697
               I+ L+  L + F+MKDLG     LG+++     S    LSQ KY   +L R  + ++
Sbjct: 1025 KGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNA 1084

[Close]

BLAST of Cmc11g0303131 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 282.3 bits (721), Expect = 1.4e-74
Identity = 217/799 (27.16%), Postives = 358/799 (44.81%), Query Frame = 0


Query: 39   WHLRLGHASPEKLCHL---------ISINNLNSITKFVPFNCLNCKLAKEPALSFSKSTS 98
            WH R GH S  KL  +           +NNL  ++  +   CLN K A+ P       T 
Sbjct: 418  WHERFGHISDGKLLEIKRKNMFSDQSLLNNL-ELSCEICEPCLNGKQARLPFKQLKDKTH 477

Query: 99   ICDKPFDLIHSDIWGPGPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANM 158
            I  +P  ++HSD+ GP    T+    Y+V+F+D F+ +   Y +K++S++   + +F   
Sbjct: 478  I-KRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAK 537

Query: 159  IRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDS 218
                F+  +  L  DN  EY  + +  F  ++G     + PHT Q NG +ER  R I + 
Sbjct: 538  SEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEK 597

Query: 219  VRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNIS--PFERLYGTPPNYSNLKVFGC 278
             R ++  A   + FWGEA LT+ Y INR+PS  L + S  P+E  +   P   +L+VFG 
Sbjct: 598  ARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGA 657

Query: 279  ACFVLLHPHEHTKLEPRARRYCFLGYGTKHKGFRCWDLLSNRLRISRHVTFWEHTMF-SR 338
              +V +  ++  K + ++ +  F+GY  +  GF+ WD ++ +  ++R V   E  M  SR
Sbjct: 658  TVYVHI-KNKQGKFDDKSFKSIFVGY--EPNGFKLWDAVNEKFIVARDVVVDETNMVNSR 717

Query: 339  LSSFHASF------SSPQSFFTDTSIDL---FPLSESTPDN------------------- 398
               F   F      S  ++F  D+   +   FP      DN                   
Sbjct: 718  AVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDS 777

Query: 399  -ELAQSALTSATSDQSSI----------------------------SDGNSDPPP----- 458
             ++ Q+   + + +  +I                            S G+ +P       
Sbjct: 778  RKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESE 837

Query: 459  -------------------DIPPRRSTRVREPP-------------IHLQDYHCFSTIVS 518
                               +I  RRS R++  P             + L  +  F+ + +
Sbjct: 838  TAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPN 897

Query: 519  LIEPTSYQEASTDPLWQKAMNDELRALEKTHTWDYVDLPP-------------------- 578
              +   Y++  +   W++A+N EL A +  +TW     P                     
Sbjct: 898  SFDEIQYRDDKSS--WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGN 957

Query: 579  -----------GYSQEYGIDYEETFAPVAQMTSVRSLLAVAAAKQWPLLQMDVKNAFLNW 638
                       G++Q+Y IDYEETFAPVA+++S R +L++       + QMDVK AFLN 
Sbjct: 958  PIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNG 1017

Query: 639  TLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQASRAWFATFSSTITQLGFTSSPHDTAL 697
            TL EE+YM+ P G S     VC L +A+YGLKQA+R WF  F   + +  F +S  D  +
Sbjct: 1018 TLKEEIYMRLPQGISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCI 1077

[Close]

BLAST of Cmc11g0303131 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 8.0e-25
Identity = 71/209 (33.97%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 492 MDVKNAFLNWTLSEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQASRAWFATFSSTITQ 551
           MDV  AFLN T+ E +Y+K PPG      P  V  L   +YGLKQA   W    ++T+ +
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 552 LGFTSSPHDTALFTRHTSQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSL 611
           +GF     +  L+ R TS G + + +YVDD+++    P+    ++  L + + MKDLG +
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 612 NYFLGLEVSWRSDGYL-LSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDV 671
           + FLGL +   S+G + LS   Y +   + S I       TPL  +  L       L+D+
Sbjct: 121 DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 672 SLYRQLVGSLIYLTVT-HPDIAYAVHIVS 697
           + Y+ +VG L++   T  PDI+Y V ++S
Sbjct: 181 TPYQSIVGQLLFCANTGRPDISYPVSLLS 209

[Close]

BLAST of Cmc11g0303131 vs. ExPASy TrEMBL
Match: A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 1339.3 bits (3465), Expect = 0.0e+00
Identity = 670/725 (92.41%), Postives = 675/725 (93.10%), Query Frame = 0


Query: 3    QTIGTGCKVGRLFELLSLQVPPPSISAPVTDSDTYQWHLRLGHASPEKLCHLISINNLNS 62
            QTIGTG KVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLGHASPEKL HLISINNLNS
Sbjct: 414  QTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNS 473

Query: 63   ITKFVPFNCLNCKLAKEPALSFSKSTSICDKPFDLIHSDIWGPGPTSTVHGYRYYVLFID 122
            ITKFVPFNCLNCKLAK+PALSFS STSICDKPFDLIHSDIWGP PTSTVHGYRYYVLFID
Sbjct: 474  ITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFID 533

Query: 123  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 182
            DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG
Sbjct: 534  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 593

Query: 183  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 242
            TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV
Sbjct: 594  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 653

Query: 243  LQNISPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARRYCFLGYGTKHKGFRC 302
            LQNISPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRAR  CFLGYGT+HKGFRC
Sbjct: 654  LQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRC 713

Query: 303  WDLLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPDNELAQ 362
            WD LSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTP NELAQ
Sbjct: 714  WDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQ 773

Query: 363  SALTSATSDQSSISDGNSDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 422
            SA TSATSDQSSISDGN DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA
Sbjct: 774  SAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 833

Query: 423  STDPLWQKAMNDELRALEKTHTWDYVDLPP------------------------------ 482
            STDPLWQKAMNDEL+ALEK HTWDYVDLPP                              
Sbjct: 834  STDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA 893

Query: 483  -GYSQEYGIDYEETFAPVAQMTSVRSLLAVAAAKQWPLLQMDVKNAFLNWTLSEEVYMKP 542
             GYSQEYGIDYEETFAPVA+MTSVRSLLAVAAAKQWPLLQMDVKNAFLN TLSEEVYMKP
Sbjct: 894  KGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKP 953

Query: 543  PPGTSSPPHKVCLLRRALYGLKQASRAWFATFSSTITQLGFTSSPHDTALFTRHTSQGIV 602
            PPGTSSPPHKVCLLRRALYGLKQA RAWFATFSSTITQLGFTSSPHDTALFTRHT QGIV
Sbjct: 954  PPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIV 1013

Query: 603  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSWRSDGYLLSQAKY 662
            LLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKY
Sbjct: 1014 LLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 1073

Query: 663  ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYA 697
            ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVGSLIYLTVT PDIAYA
Sbjct: 1074 ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYA 1133

[Close]

BLAST of Cmc11g0303131 vs. ExPASy TrEMBL
Match: A0A5D3C0D7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00020 PE=4 SV=1)

HSP 1 Score: 1339.3 bits (3465), Expect = 0.0e+00
Identity = 670/725 (92.41%), Postives = 675/725 (93.10%), Query Frame = 0


Query: 3    QTIGTGCKVGRLFELLSLQVPPPSISAPVTDSDTYQWHLRLGHASPEKLCHLISINNLNS 62
            QTIGTG KVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLGHASPEKL HLISINNLNS
Sbjct: 414  QTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNS 473

Query: 63   ITKFVPFNCLNCKLAKEPALSFSKSTSICDKPFDLIHSDIWGPGPTSTVHGYRYYVLFID 122
            ITKFVPFNCLNCKLAK+PALSFS STSICDKPFDLIHSDIWGP PTSTVHGYRYYVLFID
Sbjct: 474  ITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFID 533

Query: 123  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 182
            DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG
Sbjct: 534  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 593

Query: 183  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 242
            TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV
Sbjct: 594  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 653

Query: 243  LQNISPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARRYCFLGYGTKHKGFRC 302
            LQNISPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRAR  CFLGYGT+HKGFRC
Sbjct: 654  LQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRC 713

Query: 303  WDLLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPDNELAQ 362
            WD LSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTP NELAQ
Sbjct: 714  WDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQ 773

Query: 363  SALTSATSDQSSISDGNSDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 422
            SA TSATSDQSSISDGN DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA
Sbjct: 774  SAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 833

Query: 423  STDPLWQKAMNDELRALEKTHTWDYVDLPP------------------------------ 482
            STDPLWQKAMNDEL+ALEK HTWDYVDLPP                              
Sbjct: 834  STDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA 893

Query: 483  -GYSQEYGIDYEETFAPVAQMTSVRSLLAVAAAKQWPLLQMDVKNAFLNWTLSEEVYMKP 542
             GYSQEYGIDYEETFAPVA+MTSVRSLLAVAAAKQWPLLQMDVKNAFLN TLSEEVYMKP
Sbjct: 894  KGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKP 953

Query: 543  PPGTSSPPHKVCLLRRALYGLKQASRAWFATFSSTITQLGFTSSPHDTALFTRHTSQGIV 602
            PPGTSSPPHKVCLLRRALYGLKQA RAWFATFSSTITQLGFTSSPHDTALFTRHT QGIV
Sbjct: 954  PPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIV 1013

Query: 603  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSWRSDGYLLSQAKY 662
            LLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKY
Sbjct: 1014 LLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 1073

Query: 663  ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYA 697
            ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVGSLIYLTVT PDIAYA
Sbjct: 1074 ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYA 1133

[Close]

BLAST of Cmc11g0303131 vs. ExPASy TrEMBL
Match: A0A5A7T8F2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00410 PE=4 SV=1)

HSP 1 Score: 1338.2 bits (3462), Expect = 0.0e+00
Identity = 669/725 (92.28%), Postives = 675/725 (93.10%), Query Frame = 0


Query: 3    QTIGTGCKVGRLFELLSLQVPPPSISAPVTDSDTYQWHLRLGHASPEKLCHLISINNLNS 62
            QTIGTG KVGRLFE+LSLQVP PSISAPVTDSDTYQWHLRLGHASPEKL HLISINNLNS
Sbjct: 414  QTIGTGRKVGRLFEVLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNS 473

Query: 63   ITKFVPFNCLNCKLAKEPALSFSKSTSICDKPFDLIHSDIWGPGPTSTVHGYRYYVLFID 122
            ITKFVPFNCLNCKLAK+PALSFS STSICDKPFDLIHSDIWGP PTSTVHGYRYYVLFID
Sbjct: 474  ITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFID 533

Query: 123  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 182
            DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG
Sbjct: 534  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 593

Query: 183  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 242
            TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV
Sbjct: 594  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 653

Query: 243  LQNISPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARRYCFLGYGTKHKGFRC 302
            LQNISPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRAR  CFLGYGT+HKGFRC
Sbjct: 654  LQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRC 713

Query: 303  WDLLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPDNELAQ 362
            WD LSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTP NELAQ
Sbjct: 714  WDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQ 773

Query: 363  SALTSATSDQSSISDGNSDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 422
            SA TSATSDQSSISDGN DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA
Sbjct: 774  SAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 833

Query: 423  STDPLWQKAMNDELRALEKTHTWDYVDLPP------------------------------ 482
            STDPLWQKAMNDEL+ALEK HTWDYVDLPP                              
Sbjct: 834  STDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA 893

Query: 483  -GYSQEYGIDYEETFAPVAQMTSVRSLLAVAAAKQWPLLQMDVKNAFLNWTLSEEVYMKP 542
             GYSQEYGIDYEETFAPVA+MTSVRSLLAVAAAKQWPLLQMDVKNAFLN TLSEEVYMKP
Sbjct: 894  KGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKP 953

Query: 543  PPGTSSPPHKVCLLRRALYGLKQASRAWFATFSSTITQLGFTSSPHDTALFTRHTSQGIV 602
            PPGTSSPPHKVCLLRRALYGLKQA RAWFATFSSTITQLGFTSSPHDTALFTRHT QGIV
Sbjct: 954  PPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIV 1013

Query: 603  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSWRSDGYLLSQAKY 662
            LLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKY
Sbjct: 1014 LLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 1073

Query: 663  ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYA 697
            ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVGSLIYLTVT PDIAYA
Sbjct: 1074 ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYA 1133

[Close]

BLAST of Cmc11g0303131 vs. ExPASy TrEMBL
Match: A0A5D3D7V8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00480 PE=4 SV=1)

HSP 1 Score: 1336.6 bits (3458), Expect = 0.0e+00
Identity = 668/723 (92.39%), Postives = 673/723 (93.08%), Query Frame = 0


Query: 3    QTIGTGCKVGRLFELLSLQVPPPSISAPVTDSDTYQWHLRLGHASPEKLCHLISINNLNS 62
            QTIGTG KVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLGHASPEKL HLISINNLNS
Sbjct: 414  QTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNS 473

Query: 63   ITKFVPFNCLNCKLAKEPALSFSKSTSICDKPFDLIHSDIWGPGPTSTVHGYRYYVLFID 122
            ITKFVPFNCLNCKLAK+PALSFS STSICDKPFDLIHSDIWGP PTSTVHGYRYYVLFID
Sbjct: 474  ITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFID 533

Query: 123  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 182
            DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG
Sbjct: 534  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 593

Query: 183  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 242
            TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV
Sbjct: 594  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 653

Query: 243  LQNISPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARRYCFLGYGTKHKGFRC 302
            LQNISPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRAR  CFLGYGT+HKGFRC
Sbjct: 654  LQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRC 713

Query: 303  WDLLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPDNELAQ 362
            WD LSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTP NELAQ
Sbjct: 714  WDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQ 773

Query: 363  SALTSATSDQSSISDGNSDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 422
            SA TSATSDQSSISDGN DPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA
Sbjct: 774  SAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 833

Query: 423  STDPLWQKAMNDELRALEKTHTWDYVDLPP------------------------------ 482
            STDPLWQKAMNDEL+ALEK HTWDYVDLPP                              
Sbjct: 834  STDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA 893

Query: 483  -GYSQEYGIDYEETFAPVAQMTSVRSLLAVAAAKQWPLLQMDVKNAFLNWTLSEEVYMKP 542
             GYSQEYGIDYEETFAPVA+MTSVRSLLAVAAAKQWPLLQMDVKNAFLN TLSEEVYMKP
Sbjct: 894  KGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKP 953

Query: 543  PPGTSSPPHKVCLLRRALYGLKQASRAWFATFSSTITQLGFTSSPHDTALFTRHTSQGIV 602
            PPGTSSPPHKVCLLRRALYGLKQA RAWFATFSSTITQLGFTSSPHDTALFTRHT QGIV
Sbjct: 954  PPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIV 1013

Query: 603  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSWRSDGYLLSQAKY 662
            LLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKY
Sbjct: 1014 LLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 1073

Query: 663  ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYA 695
            ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVGSLIYLTVT PDIAYA
Sbjct: 1074 ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYA 1133

[Close]

BLAST of Cmc11g0303131 vs. ExPASy TrEMBL
Match: A0A5A7UPX9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G00890 PE=4 SV=1)

HSP 1 Score: 1335.5 bits (3455), Expect = 0.0e+00
Identity = 664/700 (94.86%), Postives = 670/700 (95.71%), Query Frame = 0


Query: 3    QTIGTGCKVGRLFELLSLQVPPPSISAPVTDSDTYQWHLRLGHASPEKLCHLISINNLNS 62
            QTIGTG KVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLGHASPEKL HLISINNLNS
Sbjct: 414  QTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNS 473

Query: 63   ITKFVPFNCLNCKLAKEPALSFSKSTSICDKPFDLIHSDIWGPGPTSTVHGYRYYVLFID 122
            ITKFVPFNCLNCKLAK+P LSFS STSICDKPFDLIHSDIWGP PTSTVHGYRYYVLFID
Sbjct: 474  ITKFVPFNCLNCKLAKQPVLSFSTSTSICDKPFDLIHSDIWGPTPTSTVHGYRYYVLFID 533

Query: 123  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 182
            DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG
Sbjct: 534  DFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQG 593

Query: 183  TLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSV 242
            TLVQRSCPHTSQQNGRAERKHRHILD VR LLLSASCPEKFWGEAALTSVYTINRLPSSV
Sbjct: 594  TLVQRSCPHTSQQNGRAERKHRHILDLVRGLLLSASCPEKFWGEAALTSVYTINRLPSSV 653

Query: 243  LQNISPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARRYCFLGYGTKHKGFRC 302
            LQNISPFERLYG PPNYSNLKVFGCACFVLL PHEHTKLEPRAR  CFLGYGT+HKGFRC
Sbjct: 654  LQNISPFERLYGNPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRC 713

Query: 303  WDLLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPDNELAQ 362
            WD LSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTP NELAQ
Sbjct: 714  WDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQ 773

Query: 363  SALTSATSDQSSISDGNSDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEA 422
            SA TSATSDQSSISDGN DPPPDIPPRRSTRVREPPIHLQDYH FSTIVSLIEPTSYQEA
Sbjct: 774  SAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHYFSTIVSLIEPTSYQEA 833

Query: 423  STDPLWQKAMNDELRALEKTHTWDYVDLPPG------YSQEYGIDYEETFAPVAQMTSVR 482
            STDPLWQKAMNDEL+ALEK HTWDYVDLPPG      YSQEYGIDYEETFAPVA+MTSVR
Sbjct: 834  STDPLWQKAMNDELQALEKMHTWDYVDLPPGSACSKRYSQEYGIDYEETFAPVARMTSVR 893

Query: 483  SLLAVAAAKQWPLLQMDVKNAFLNWTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAS 542
            SLLAVAAAKQWPLLQMDVKNAFLN TLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQA 
Sbjct: 894  SLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAP 953

Query: 543  RAWFATFSSTITQLGFTSSPHDTALFTRHTSQGIVLLLLYVDDMIITGNDPQAISDLQHY 602
            RAWFATFSSTITQLGFTSSPHDT LFTRHT QGIVLLLLYVDDMIITGNDP+AISDLQHY
Sbjct: 954  RAWFATFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPRAISDLQHY 1013

Query: 603  LGQHFEMKDLGSLNYFLGLEVSWRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVH 662
            LGQHFEMKDLGSLNYFLGLEVS RSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVH
Sbjct: 1014 LGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVH 1073

Query: 663  LTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVS 697
            LTPYDGVPLE+VSLYRQLVGSLIYLTVT PDIAYAVHIVS
Sbjct: 1074 LTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVS 1113

[Close]

BLAST of Cmc11g0303131 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 241.9 bits (616), Expect = 1.5e-63
Identity = 145/397 (36.52%), Postives = 210/397 (52.90%), Query Frame = 0


Query: 364 ALTSATSDQSSISDGNSDPPPDIPPRRSTRVREPPIHLQDYHCFST-------------- 423
           A TS++S     S    +  P+     S R    P +LQDY+C S               
Sbjct: 7   ASTSSSSIDIMPSANIQNDVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSY 66

Query: 424 -------------IVSLIEPTSYQEASTDPLWQKAMNDELRALEKTHTWDYVDLPP---- 483
                        I    EP++Y EA    +W  AM+DE+ A+E THTW+   LPP    
Sbjct: 67  EKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKP 126

Query: 484 ---------------------------GYSQEYGIDYEETFAPVAQMTSVRSLLAVAAAK 543
                                      GY+Q+ GID+ ETF+PV ++TSV+ +LA++A  
Sbjct: 127 IGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIY 186

Query: 544 QWPLLQMDVKNAFLNWTLSEEVYMKPPP------GTSSPPHKVCLLRRALYGLKQASRAW 603
            + L Q+D+ NAFLN  L EE+YMK PP      G S PP+ VC L++++YGLKQASR W
Sbjct: 187 NFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQW 246

Query: 604 FATFSSTITQLGFTSSPHDTALFTRHTSQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQ 663
           F  FS T+   GF  S  D   F + T+   + +L+YVDD+II  N+  A+ +L+  L  
Sbjct: 247 FLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKS 306

Query: 664 HFEMKDLGSLNYFLGLEVSWRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTP 697
            F+++DLG L YFLGLE++  + G  + Q KYA DLL  +G+     +S P+DP+V  + 
Sbjct: 307 CFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSA 366

[Close]

BLAST of Cmc11g0303131 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 2.7e-20
Identity = 53/123 (43.09%), Postives = 76/123 (61.79%), Query Frame = 0


Query: 573 LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSWRSDGYLLSQAKYA 632
           LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++     G  LSQ KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 633 SDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAV 692
             +L  +G+ D    STPL   ++ +        D S +R +VG+L YLT+T PDI+YAV
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 693 HIV 696
           +IV
Sbjct: 123 NIV 124

[Close]

BLAST of Cmc11g0303131 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 43.5 bits (101), Expect = 8.0e-04
Identity = 30/99 (30.30%), Postives = 42/99 (42.42%), Query Frame = 0


Query: 415 EPTSYQEASTDPLWQKAMNDELRALEKTHTWDYVDLP----------------------- 474
           EP S   A  DP W +AM +EL AL +  TW  V  P                       
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 475 --------PGYSQEYGIDYEETFAPVAQMTSVRSLLAVA 483
                    G+ QE GI + ET++PV +  ++R++L VA
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

The following BLAST results are available for this feature:

BLAST of Cmc11g0303131 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041601.1	0.0e+00	92.41	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK04714.1	0.0e+00	92.41	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0037745.1	0.0e+00	92.28	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK19656.1	0.0e+00	92.39	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0057254.1	0.0e+00	94.86	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc11g0303131 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	4.6e-121	35.39	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	9.9e-116	33.09	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	9.7e-87	33.19	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.4e-74	27.16	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P25600	8.0e-25	33.97	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc11g0303131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VIT8	0.0e+00	92.41	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3C0D7	0.0e+00	92.41	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7T8F2	0.0e+00	92.28	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3D7V8	0.0e+00	92.39	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UPX9	0.0e+00	94.86	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc11g0303131 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.5e-63	36.52	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.7e-20	43.09	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	8.0e-04	30.30	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 17..78 e-value: 6.0E-8 score: 32.4
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 93..192 e-value: 6.4E-11 score: 42.5
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 90..256 score: 19.560854
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 86..265 e-value: 2.3E-39 score: 136.8
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 453..651 e-value: 3.4E-58 score: 197.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..395
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 395..696 coord: 32..364
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 92..265
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 472..690

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0303131.1	Cmc11g0303131.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding