Cmc11g0303061 (gene) Melon (Charmono) v1.1
|
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTTGGTAAAATATAGGGAGGCATTTATCTTAAATATTAATAACAAAAGGGGAAGGAAAGTAGTAGTAAAGGCGATTAGTCCAAATTTCTCAAACACTTCCAATTCTCCTTTCCTTATCTTTGTTACGAAGAACGTCGGAAGAAAGAACGAAAGAGCAAAACGATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTCGAGAGCAGCGATACCATCGATAATGTCAAAGCCAAGATCCAGGTCTCTTTTTTCTGATTCCCTTCCATCTCTTACCTTTTCAATCAATTCACCACCCTTTCTTTGCTTCAATTTCGCTTCTTCTTTGCCCCTTCTTAATGTTTATACCTTTTCTTATGTTTACTTCCATTTCTTTGACATCCCTTCGCCCTTCAGATGTTATTGCCTTTTTCCGTTTCGATTTCAGTTGTTTTTGTTCTTCCCTGACGTTTCTTTGGTTTTTTTTTTTGATCAAATTCTGACTAGCATGCGTTTGCTTTGGATTCTGTATCATTGCATGATCCAATGGATGAAGGATTAAGAAATCGGCGTTACTGATTTCATTTGCGTTTAGCACATGTGTCAAGTTGAATTGTTGGATGCGGTCTCTAAGTTTATGCTTGTTCTTATCGTCTGGTTGTTTGTTAATTCGTCATATTTTCCATGCCTTGAGTTCTTTTTTCAGGTGTATATTTAATACTTGTCACATCACTTTACGAACAAAATTATTTTGGATGCATGAATTGGTTTGTGAATTTGATTCCAGCGTGCCGTCTTTGTAATCATATTTTGAGTTTTGGAATGTATATTTCTTCTAGCTTTAAACAGGGGAGATTAGAAAATTTGGTTTTAATGGTCTGTTTCAATGCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACGCTTGCAGATTATAACATTCAAAAGGAGTCAACCCTTCACTTGGTTTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACACTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATTAAGGAGCGGGTTGAGGAGAAAGAGGGGATTCCCCCTGTACAGCAAAGGTCTGCATTTGCCTCCTTAAATTACTTAAACTACAATAACTATATTTTCTATGGCCTTTTGTATATGTGGATAACTTGTTTAATTTCCCTCAAATGTGCCACTGTGCCTTCTCTGTTTAAGAATGGAATTTGGTGTGAAAATTTCTTACTTAGCACAGCATTCATTAGTACTTTTTTGTAAGAAAACAATGAAGTTGGGTGAATTTTAGATTCAACACTGAATTCCATACTTGAGTTTTATTGAAAAATGTCCTTACATAACGCTACTCAAACAATTTTAGGACAGTTCTATTGCTAATTTGGGAAGGGTTGAGTGGAAAGGACACTTATTCCTCTTTTCTAAGGTTGAGAATCCATCTCTTATAAAAAGAAGACAGGATATGCCTATTAAGTATTTCTTATGTTTGTTGTATTTTTACATGTTTGAGGTACTTGAAGTTTTATTCTGAACAGTAAAAGGTATGTAATACATTGATAATAAAATATGAAGGACGATGTAAGATTTAAAATATTCAGCCAGGTAATGTCTTATAGTGAAGGTTTATAAAAGAAACCTAAATGCACCGAGTATATTTTCTAGTTGTTTCAAAATAACTAAGAATAGGAATTCGGAACAGAATTTCATGTAAAATAGTGTTGAAGCTGTTGATTCAGAATTCCGAGACTTTTGTTAGTTTCACATACTTGGAAACTTAACTCCATGGTTCAAGTTCAAGTATCTGAATTTAAAATGTAAATAAATGATTTCCCATGGTCTAATACAGGAATGCTCAAGTGCCTGAAAATCGATAGTTTGATAGACTTAGACAGCCACGTTACTTAAGTTGAATTGTCCATGATTTGTAACTATAGGCTTTCTCTAGTTGGCTTCCCATGGTTCTCTAATATTATCCATTGTGTTGTTATTTTCTGGAGTGGTGTTTAATATATCCTACTCTCGTTATGACAATTAGTCAGTCAACAGTTCTGATTTCCATGAAAATTCTTTGTTCTAGTTCCTGTGGTCGGCCATCTTTGAACTCGTACCGGATGAACGGGATCTGTCGTTGCTTTTAGTTTTATGACACTTAAAATTTGATATTGCAGTATGCTTATTATAACAAGTTCTATCATACTCTGCTTTTTGCAGGCTCATTTATGCCGGTAAACAGCTTGGAGATGACAAAACAGCTAAAGACTACAACATCGAGGGTGGTTCTGTTCTCCATCTAGTGCTAGCCCTGAGGGGTGGTCATCTGTAAAAGCATTTATCTATCACCTCCTGAAATGCGGAATTTTTAGTTTTTTGTTTTGTTGGTGCTTGATGAATGCATGAGCGGCATCTTTGCTTGTGTGTGGATAAATGGAAAATATTTGAGCCCAAACTTTAACTCTCTTATCAAATTACTCTTGTAATAGAGAGATTTCATGTCCTGGGTATCTCCATCTGATACCCATCTCTTTTCAAGTTCAACATTAAACCATTTGGTGTGCGTGGAAGGAGGAGTTTGTAAAATTTAGTCCCAAAGTCTTATCAATTTTTATTGGGGGAATGGAAGCTTAATTATCTCTCTATTGTTTTTACTTAATTTTCATAGGTCCTCTCCTGTTTATGACCAGGGATTGTATCCCATTGACACAAAGTGTTTTGATGTCCTTCACCAGGTGCGTTTCATACTCTTTCTTTCCTCTTATTAATAGTGTGACGCATGTGAATTTTTTGCTAATGCTTTTGTTTTCCCTTTTCAATTTTTGAGAAACATAGGGCTTTGATAATTGTTTGTGTTTTTTAATTTTAATTCTCATTTTTCAGCAATGTTTCAATAATTGTGTAGAAATTTTAAAAGGACTAAATTAGCGTCGTTTCGGTTCTGGTTTTGTCGAACAAAACCCTAAAAATTAGGTTTCCTATTTTATTTCAGTCCCACGTCACACACATTCCCTCGGCCTTTTTGTGTGTTCTCTCTCACATAATTCGCATTCACTTTGTCTCTCTCTTACCACCAAGAAGAAGAAAGATCAGACCCATTCAGAAGATGGTGTGTTTTTTTTTTCTTTTTCAATTTTTAAAAATATTTTTCTCACCCGCGGTAAAAGAATGGTTATTCTCCATTTTTGTTATTTTTCCTTTGAAATATCATCAACTGATCACAAATTCAAGATTGGCCCAAATTTTTTAATTTAAAAAACAAGTCATTTTGAAAATGATTGGAGCATTCGGCAACCATGTAAAAAACAAGTTTTGAAGTGTATTTTATTCAATTTCAAAATGTTCAAATCTAATTGAATTGGAGAAACTTTTTTTCTTTGATTAAATTTGTTAAAACTATTTTGACATTTGCACTATCGCTTAATTTGCAATGGTTTCTTTTTAATTCATTATTAGTTTCTATTTGGTTTGGTTCTTAGGTTATCTTTTCCTTTTTTAGATTTAGGTTCTAAGTTTAATATCTATTCGGATTGTGTGTTTCGTTTTTTTCCTTAATTTTATTTCGATTTGGTGGCTTTCAAAGTTCAAAGTTTATACTTTTTCAACGTAGATACTGAATAGAGTAATGACAAGTCCACTTAACATCACATGCTAATGTAGGCACTGACATAGTTTTGGAATATGAGAACTTGGTTTCTATAGGTAATCCAAGTAAATTTAGGGTACGTTTGGGGAGGGAAAGTAAATTTAGGGTACGTTTGGGGAGGGAAATAATTATGGAAGAAAATGATTATGATATCCTAGGATTATGATAATATGTGTTTGAGAGAAATGTTATTATTGGCAGTGTTATGGTAATATGTGTTTGGGGGAAAAAATATGAAAGATAGTGTTATGATAATGTGTTTGGGAGAGGGATTATGATAGTAGTGTTATAATCATATGTGTTTGGTGGAAGGGTTATGATTGTAGTAATTTAAAAAATAGTAATAGAATTTGGATTGGGTTATTTGTAGGGTTGTAAGAAAGTAAAAGAAAGGATAAGATAGAGTTATTTAGAGATTAGATCCTAATCCTCATTTATCATAATCCTTTCCCCGTAAAACCCCATCCCAAACATACCCAGGAGCCGTTTGGGGAAGGGTTGGGTAATGGAGGGTTAGTGTTATAATAAAACTAGTATTATGATAAACATAGTTTTATTATACAATGTGTTTGGGGAAAGGATTTAAAAAGGTAGTTTTGTGATAAGATGTATTTGGGAGAAATGTTTAAAAAAGTAATTTTATGGGGATAGTTGAAAAGATAGTGTTATGGAAAGTTGAAAAAGGTTTAAGAAGAAGAGAGAGGGAAAAGATTATGATAACCCCTAAAACAAGGGTTATGTAAACCTTCTTCAAACAAGGGTTGAGTTACCATAACTTAACCCAATAGTAATAACCGTTGGGCCAAAGGACCCCTTGCAGATTATATTCTTCAAATGTAACTTCGAGTTATAAATGAAATTTTCTCATCGGTTTTTCTTGACTTTTTCAATTTTATTCATTTATTTATTCTTCTGTCAATTACTCCCTGAAGTATTTGTCTTTAGCTTTTTAAAAATAAATTAATTATAATTTGTCTAATCTTTTATCGGAAGGTATTTCATTTCTTGTTTTGTAATTTATCTTTACTTGTGTGAAAATTTAAGAGAAAATAAAGAGTGGGCTTCAAATTTTTGTTTTTGATATTTGGCCTGTATTTCAACTTTTGAAAGTGGCAAGGATAAGAGGAAATGTACCAAAAATACTCATCAACCATGCCATCAACAACGCGCGTAATATATTT AATTTGGTAAAATATAGGGAGGCATTTATCTTAAATATTAATAACAAAAGGGGAAGGAAAGTAGTAGTAAAGGCGATTAGTCCAAATTTCTCAAACACTTCCAATTCTCCTTTCCTTATCTTTGTTACGAAGAACGTCGGAAGAAAGAACGAAAGAGCAAAACGATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTCGAGAGCAGCGATACCATCGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACGCTTGCAGATTATAACATTCAAAAGGAGTCAACCCTTCACTTGGTTTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACACTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATTAAGGAGCGGGTTGAGGAGAAAGAGGGGATTCCCCCTGTACAGCAAAGGCTCATTTATGCCGGTAAACAGCTTGGAGATGACAAAACAGCTAAAGACTACAACATCGAGGGTGGTTCTGTTCTCCATCTAGTGCTAGCCCTGAGGGGTGGTCATCTGTAAAAGCATTTATCTATCACCTCCTGAAATGCGGAATTTTTAGTTTTTTGTTTTGTTGGTGCTTGATGAATGCATGAGCGGCATCTTTGCTTGTGTGTGGATAAATGGAAAATATTTGAGCCCAAACTTTAACTCTCTTATCAAATTACTCTTGTAATAGAGAGATTTCATGTCCTGGGTATCTCCATCTGATACCCATCTCTTTTCAAGTTCAACATTAAACCATTTGGTGTGCGTGGAAGGAGGAGTTTGTAAAATTTAGTCCCAAAGTCTTATCAATTTTTATTGGGGGAATGGAAGCTTAATTATCTCTCTATTGTTTTTACTTAATTTTCATAGGTCCTCTCCTGTTTATGACCAGGGATTGTATCCCATTGACACAAAGTGTTTTGATGTCCTTCACCAGTGGCAAGGATAAGAGGAAATGTACCAAAAATACTCATCAACCATGCCATCAACAACGCGCGTAATATATTT ATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTCGAGAGCAGCGATACCATCGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACGCTTGCAGATTATAACATTCAAAAGGAGTCAACCCTTCACTTGGTTTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACACTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATTAAGGAGCGGGTTGAGGAGAAAGAGGGGATTCCCCCTGTACAGCAAAGGCTCATTTATGCCGGTAAACAGCTTGGAGATGACAAAACAGCTAAAGACTACAACATCGAGGGTGGTTCTGTTCTCCATCTAGTGCTAGCCCTGAGGGGTGGTCATCTGTAA MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGHL Homology
BLAST of Cmc11g0303061 vs. NCBI nr
Match: XP_008456305.1 (PREDICTED: ubiquitin-NEDD8-like protein RUB1 [Cucumis melo] >KAA0054675.1 ubiquitin-NEDD8-like protein RUB1 [Cucumis melo var. makuwa] >TYK08596.1 ubiquitin-NEDD8-like protein RUB1 [Cucumis melo var. makuwa]) HSP 1 Score: 300.8 bits (769), Expect = 6.6e-78 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Cmc11g0303061 vs. NCBI nr
Match: XP_004139900.1 (ubiquitin-NEDD8-like protein RUB1 [Cucumis sativus] >XP_038900398.1 ubiquitin-NEDD8-like protein RUB1 [Benincasa hispida] >KAE8646873.1 hypothetical protein Csa_020638 [Cucumis sativus]) HSP 1 Score: 298.5 bits (763), Expect = 3.3e-77 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Cmc11g0303061 vs. NCBI nr
Match: XP_022149770.1 (ubiquitin-NEDD8-like protein RUB1 [Momordica charantia]) HSP 1 Score: 297.4 bits (760), Expect = 7.3e-77 Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Cmc11g0303061 vs. NCBI nr
Match: XP_028067984.1 (ubiquitin-NEDD8-like protein RUB2 [Camellia sinensis] >XP_028947901.1 ubiquitin-NEDD8-like protein RUB2 isoform X1 [Malus domestica] >KAB1216920.1 Ubiquitin-NEDD8-like protein RUB2 [Morella rubra] >KAB2608029.1 polyubiquitin [Pyrus ussuriensis x Pyrus communis] >RXH76481.1 hypothetical protein DVH24_019369 [Malus domestica]) HSP 1 Score: 297.4 bits (760), Expect = 7.3e-77 Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of Cmc11g0303061 vs. NCBI nr
Match: XP_021274099.1 (ubiquitin-NEDD8-like protein RUB1 [Herrania umbratica]) HSP 1 Score: 297.4 bits (760), Expect = 7.3e-77 Identity = 152/154 (98.70%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of Cmc11g0303061 vs. ExPASy Swiss-Prot
Match: P0C030 (Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB1 PE=2 SV=2) HSP 1 Score: 294.7 bits (753), Expect = 6.2e-79 Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of Cmc11g0303061 vs. ExPASy Swiss-Prot
Match: P0C073 (Ubiquitin-NEDD8-like protein RUB1 OS=Deschampsia antarctica OX=159298 GN=RUB1 PE=2 SV=2) HSP 1 Score: 294.3 bits (752), Expect = 8.1e-79 Identity = 150/153 (98.04%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of Cmc11g0303061 vs. ExPASy Swiss-Prot
Match: Q9SHE7 (Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana OX=3702 GN=RUB1 PE=1 SV=3) HSP 1 Score: 293.9 bits (751), Expect = 1.1e-78 Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of Cmc11g0303061 vs. ExPASy Swiss-Prot
Match: P0C031 (Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB2 PE=2 SV=2) HSP 1 Score: 293.9 bits (751), Expect = 1.1e-78 Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of Cmc11g0303061 vs. ExPASy Swiss-Prot
Match: Q8RUC6 (Ubiquitin-NEDD8-like protein RUB2 OS=Arabidopsis thaliana OX=3702 GN=RUB2 PE=1 SV=3) HSP 1 Score: 291.2 bits (744), Expect = 6.9e-78 Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Cmc11g0303061 vs. ExPASy TrEMBL
Match: A0A5D3CE17 (Ubiquitin-NEDD8-like protein RUB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00180 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.2e-78 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Cmc11g0303061 vs. ExPASy TrEMBL
Match: A0A1S3C469 (ubiquitin-NEDD8-like protein RUB1 OS=Cucumis melo OX=3656 GN=LOC103496293 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.2e-78 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Cmc11g0303061 vs. ExPASy TrEMBL
Match: A0A2N9ED56 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS442 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.1e-77 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Cmc11g0303061 vs. ExPASy TrEMBL
Match: A0A498I4U3 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_019369 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 3.5e-77 Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of Cmc11g0303061 vs. ExPASy TrEMBL
Match: A0A6J0ZIS5 (ubiquitin-NEDD8-like protein RUB1 OS=Herrania umbratica OX=108875 GN=LOC110409162 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 3.5e-77 Identity = 152/154 (98.70%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of Cmc11g0303061 vs. TAIR 10
Match: AT1G31340.1 (related to ubiquitin 1 ) HSP 1 Score: 293.9 bits (751), Expect = 7.5e-80 Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of Cmc11g0303061 vs. TAIR 10
Match: AT2G35635.1 (ubiquitin 7 ) HSP 1 Score: 291.2 bits (744), Expect = 4.9e-79 Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Cmc11g0303061 vs. TAIR 10
Match: AT4G05320.2 (polyubiquitin 10 ) HSP 1 Score: 242.3 bits (617), Expect = 2.6e-64 Identity = 123/152 (80.92%), Postives = 135/152 (88.82%), Query Frame = 0
BLAST of Cmc11g0303061 vs. TAIR 10
Match: AT4G02890.1 (Ubiquitin family protein ) HSP 1 Score: 242.3 bits (617), Expect = 2.6e-64 Identity = 123/152 (80.92%), Postives = 135/152 (88.82%), Query Frame = 0
BLAST of Cmc11g0303061 vs. TAIR 10
Match: AT4G05050.1 (ubiquitin 11 ) HSP 1 Score: 242.3 bits (617), Expect = 2.6e-64 Identity = 123/152 (80.92%), Postives = 135/152 (88.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|