Cmc11g0302861 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0302861
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	CCT domain-containing protein
Location	CMiso1.1chr11: 24093101 .. 24095130 (-)
RNA-Seq Expression	Cmc11g0302861
Synteny	Cmc11g0302861

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATAAAAGTTGAATGCATTAACAAAAGCATTTGGGTTAAAAGAAAAAGCATAAATTTTTGTATTGAGAGACCCCAAAGTATCCTCTCTTTCCCTTTCTCTCTTTCTTTTTCCAGATCTTTAATCAGTTTTCTATGGCTTCATTTCCTCATAATTTCTACTCTGACCTTTATCCTAACAATTTTTCTGACCTTCAAACCCTATTAATGGCTGCTGGAGACAGTGGAATGTGTGGCATTCGGAACAACAACAACAACAACAACAACATCGACTTATTTGTTTCGAGGGAAGAAACTTTCATCCCTTTCTTTGATCAAACCGTGTCACCTGAGCAATCGTCATCTGATACCGGCCTATCGCCTTTCCTAACAATGCAGCATCCTGACCTATACGGGCCGGTCTCCGATATGACCGTTCCGTCGTTGCCTGAATTTAACATGAGTACGTATGACATTCATAGCTTAATCACCTGTCAACCACAAGTCCCTGGTACATGTAACTACGGCGACGAACTCTTAGGCTTCGTGCCCGAATTGAAGCCCCTTTACCGCGACACATGGGTAATTAATATTTTACTATTGTTTAGGGTAATTAATATAACTAATGATCGTGGTTGATCGAAAATTCAAACCTATGAATCTTTAGTCCATTTTGATATATGAAGTTGAAAATTAAATTTTTGGGATGCAGGGAAATCAGAGTAGGTATGAGACACATGCAGTGGAAGAGACAAATATTAAGGTGGCGAGTCGCTACTCAGAAGAAGAAAGGAAAGAGAGAATTGTCAGATATTTAAAAAAGAGAAACCAGAGGAATTTCAACAAAACCATCAAGGTCTAGATAATTTTCAATTATTTTCTCTAAATGAAGAAAGCTTCCTTGGATAATCATTTAGTTTTTTGGTATTTAATAATCAAACCTATTAAAAACTTTGTTCAATTCACCCAAGGTTAGATAATGTTTAGAAGCGAAAATTTTGAAACTATATTTTTCTAAAGAGTGTTTGAAATTTTAATAATAATGCAAATCACAGTAAGAATTTGAGGGAAAAAAAAAAAAAAACGAAAGGATTACCAAATTACGGGCAGCAAATCTGTTATTTTTCTTTTATGTTGATCTTAAAATAACCATCATGGCTAATTAATTGATTTATTTTTTATGTTAGTATGCATGTAGGAAAACCCTAGCAGACAGAAGAACAAGAGTACGAGGAAGATTTGCTCGCAATAATAATGAACTTTGTGACAATGATCATGAAATCCCTCTCAAAACCAACCAATTTTCTACCCCTAATCACAACCTAATTAAACAAAGAGATCAAACGGTAAGAAACCCCCATACAACTTTTTTACTGTTTCATTTCCATTTTCTTAATTAATTTTTGTTCATAAAGATAATACCTTTATCAAATGGGGTTAGTCAATTTGCTAATTATTCTAGTTATGATTGTTTTTTGGACAGAACAAGGAAGAAGAAGAGAGCTGGCTACAAGAATTGGCAGCAAGTTTAATGTATTTACCTTATGTGACAAATTATGGAATGTAATTTGAGTAAATTAACAATAATTATTACTCAAATGTAAAATTTTATATGTATATCTACCCTTGTATCTTAAACTAACTATTTAAAAATGGCCTTTGTTTTTTTTTTTTTTTTGTAGGCATGGGGTTTTTAAATTCTCTCTCTTTTTCAATCTAGTGCTTCTTCACAGATAAAAGTCAAGTTATATTTGATTGCTTTTGTGAAGATCATGTGCCTGTAATCTCTGTGTGTGTGTTGTTGCTATATGTAGTCAGGGCCCCTTTGGCCTTTGACCAAAGCTTCACATGAGTTATCATTTCATTTTTTTATTTTTGGTTTATGAAATTTGTGTTTGCTTTTTTCACTGTCATTCTTTAAACATTGTCAAAGTGTTTGGACGATGTCTGTTATGTAATAAGTTTGTGGTATATCCAAAACTTCACCATGTTTTGATATTGAGCGTTTAAGGCCTAATATGTAATATCAAACTCATTCTACTATTCTCATTGTT

mRNA sequence

TATAAAAGTTGAATGCATTAACAAAAGCATTTGGGTTAAAAGAAAAAGCATAAATTTTTGTATTGAGAGACCCCAAAGTATCCTCTCTTTCCCTTTCTCTCTTTCTTTTTCCAGATCTTTAATCAGTTTTCTATGGCTTCATTTCCTCATAATTTCTACTCTGACCTTTATCCTAACAATTTTTCTGACCTTCAAACCCTATTAATGGCTGCTGGAGACAGTGGAATGTGTGGCATTCGGAACAACAACAACAACAACAACAACATCGACTTATTTGTTTCGAGGGAAGAAACTTTCATCCCTTTCTTTGATCAAACCGTGTCACCTGAGCAATCGTCATCTGATACCGGCCTATCGCCTTTCCTAACAATGCAGCATCCTGACCTATACGGGCCGGTCTCCGATATGACCGTTCCGTCGTTGCCTGAATTTAACATGAGTACGTATGACATTCATAGCTTAATCACCTGTCAACCACAAGTCCCTGGTACATGTAACTACGGCGACGAACTCTTAGGCTTCGTGCCCGAATTGAAGCCCCTTTACCGCGACACATGGGGAAATCAGAGTAGGTATGAGACACATGCAGTGGAAGAGACAAATATTAAGGTGGCGAGTCGCTACTCAGAAGAAGAAAGGAAAGAGAGAATTGTCAGATATTTAAAAAAGAGAAACCAGAGGAATTTCAACAAAACCATCAAGTATGCATGTAGGAAAACCCTAGCAGACAGAAGAACAAGAGTACGAGGAAGATTTGCTCGCAATAATAATGAACTTTGTGACAATGATCATGAAATCCCTCTCAAAACCAACCAATTTTCTACCCCTAATCACAACCTAATTAAACAAAGAGATCAAACGAACAAGGAAGAAGAAGAGAGCTGGCTACAAGAATTGGCAGCAAGTTTAATGTATTTACCTTATGTGACAAATTATGGAATGTAATTTGAGTAAATTAACAATAATTATTACTCAAATGTAAAATTTTATATGTATATCTACCCTTGTATCTTAAACTAACTATTTAAAAATGGCCTTTGTTTTTTTTTTTTTTTTGTAGGCATGGGGTTTTTAAATTCTCTCTCTTTTTCAATCTAGTGCTTCTTCACAGATAAAAGTCAAGTTATATTTGATTGCTTTTGTGAAGATCATGTGCCTGTAATCTCTGTGTGTGTGTTGTTGCTATATGTAGTCAGGGCCCCTTTGGCCTTTGACCAAAGCTTCACATGAGTTATCATTTCATTTTTTTATTTTTGGTTTATGAAATTTGTGTTTGCTTTTTTCACTGTCATTCTTTAAACATTGTCAAAGTGTTTGGACGATGTCTGTTATGTAATAAGTTTGTGGTATATCCAAAACTTCACCATGTTTTGATATTGAGCGTTTAAGGCCTAATATGTAATATCAAACTCATTCTACTATTCTCATTGTT

Coding sequence (CDS)

ATGGCTTCATTTCCTCATAATTTCTACTCTGACCTTTATCCTAACAATTTTTCTGACCTTCAAACCCTATTAATGGCTGCTGGAGACAGTGGAATGTGTGGCATTCGGAACAACAACAACAACAACAACAACATCGACTTATTTGTTTCGAGGGAAGAAACTTTCATCCCTTTCTTTGATCAAACCGTGTCACCTGAGCAATCGTCATCTGATACCGGCCTATCGCCTTTCCTAACAATGCAGCATCCTGACCTATACGGGCCGGTCTCCGATATGACCGTTCCGTCGTTGCCTGAATTTAACATGAGTACGTATGACATTCATAGCTTAATCACCTGTCAACCACAAGTCCCTGGTACATGTAACTACGGCGACGAACTCTTAGGCTTCGTGCCCGAATTGAAGCCCCTTTACCGCGACACATGGGGAAATCAGAGTAGGTATGAGACACATGCAGTGGAAGAGACAAATATTAAGGTGGCGAGTCGCTACTCAGAAGAAGAAAGGAAAGAGAGAATTGTCAGATATTTAAAAAAGAGAAACCAGAGGAATTTCAACAAAACCATCAAGTATGCATGTAGGAAAACCCTAGCAGACAGAAGAACAAGAGTACGAGGAAGATTTGCTCGCAATAATAATGAACTTTGTGACAATGATCATGAAATCCCTCTCAAAACCAACCAATTTTCTACCCCTAATCACAACCTAATTAAACAAAGAGATCAAACGAACAAGGAAGAAGAAGAGAGCTGGCTACAAGAATTGGCAGCAAGTTTAATGTATTTACCTTATGTGACAAATTATGGAATGTAA

Protein sequence

MASFPHNFYSDLYPNNFSDLQTLLMAAGDSGMCGIRNNNNNNNNIDLFVSREETFIPFFDQTVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLITCQPQVPGTCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERIVRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQRDQTNKEEEESWLQELAASLMYLPYVTNYGM

Homology

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BLAST of Cmc11g0302861 vs. NCBI nr
Match: XP_004150045.2 (uncharacterized protein LOC101221095 [Cucumis sativus])

HSP 1 Score: 510.8 bits (1314), Expect = 7.4e-141
Identity = 252/271 (92.99%), Postives = 260/271 (95.94%), Query Frame = 0


Query: 1   MASFPHNFYSDL-YPNNFSDLQTLLMAAGDSGMCGIRNNNNNNNNIDLFVSREETFIPFF 60
           MASFPHNFY DL YPNNFSDLQTLLMAAGD+GMCGIR NN+NN+NIDLFVSREETF+  F
Sbjct: 1   MASFPHNFYPDLPYPNNFSDLQTLLMAAGDTGMCGIR-NNHNNDNIDLFVSREETFVSSF 60

Query: 61  DQTVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLITCQPQVPG 120
           DQTVSP+QSSSDT LSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLI CQPQVPG
Sbjct: 61  DQTVSPDQSSSDTSLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLINCQPQVPG 120

Query: 121 TCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERIVRYLKK 180
           TCNYGD+L+GFVPELKPLYRDTWGNQSRYE HAVEETNIKVASRYSEEERKERIVRYLKK
Sbjct: 121 TCNYGDQLIGFVPELKPLYRDTWGNQSRYEIHAVEETNIKVASRYSEEERKERIVRYLKK 180

Query: 181 RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ 240
           RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ
Sbjct: 181 RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ 240

Query: 241 RDQTNKEEEESWLQELAASLMYLPYVTNYGM 271
            DQTNKEEEESWLQELA SLMYLPYV NYG+
Sbjct: 241 IDQTNKEEEESWLQELATSLMYLPYVANYGV 270

[Close]

BLAST of Cmc11g0302861 vs. NCBI nr
Match: XP_016901933.1 (PREDICTED: uncharacterized protein LOC103496299 [Cucumis melo])

HSP 1 Score: 494.2 bits (1271), Expect = 7.2e-136
Identity = 243/246 (98.78%), Postives = 244/246 (99.19%), Query Frame = 0


Query: 1   MASFPHNFYSDLYPNNFSDLQTLLMAAGDSGMCGIR-NNNNNNNNIDLFVSREETFIPFF 60
           MASFPHNFYSDLYPNNFSDLQTLLMAAGDSGMCGIR NNNNNNNNIDLFVSREETFIPFF
Sbjct: 1   MASFPHNFYSDLYPNNFSDLQTLLMAAGDSGMCGIRNNNNNNNNNIDLFVSREETFIPFF 60

Query: 61  DQTVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLITCQPQVPG 120
           DQTVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLI+CQPQVPG
Sbjct: 61  DQTVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLISCQPQVPG 120

Query: 121 TCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERIVRYLKK 180
           TCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERIVRYLKK
Sbjct: 121 TCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERIVRYLKK 180

Query: 181 RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ 240
           RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ
Sbjct: 181 RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ 240

Query: 241 RDQTNK 246
           RDQT K
Sbjct: 241 RDQTGK 246

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BLAST of Cmc11g0302861 vs. NCBI nr
Match: KAE8646876.1 (hypothetical protein Csa_021098 [Cucumis sativus])

HSP 1 Score: 491.5 bits (1264), Expect = 4.6e-135
Identity = 244/261 (93.49%), Postives = 251/261 (96.17%), Query Frame = 0


Query: 1   MASFPHNFYSDL-YPNNFSDLQTLLMAAGDSGMCGIRNNNNNNNNIDLFVSREETFIPFF 60
           MASFPHNFY DL YPNNFSDLQTLLMAAGD+GMCGIR NN+NN+NIDLFVSREETF+  F
Sbjct: 1   MASFPHNFYPDLPYPNNFSDLQTLLMAAGDTGMCGIR-NNHNNDNIDLFVSREETFVSSF 60

Query: 61  DQTVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLITCQPQVPG 120
           DQTVSP+QSSSDT LSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLI CQPQVPG
Sbjct: 61  DQTVSPDQSSSDTSLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLINCQPQVPG 120

Query: 121 TCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERIVRYLKK 180
           TCNYGD+L+GFVPELKPLYRDTWGNQSRYE HAVEETNIKVASRYSEEERKERIVRYLKK
Sbjct: 121 TCNYGDQLIGFVPELKPLYRDTWGNQSRYEIHAVEETNIKVASRYSEEERKERIVRYLKK 180

Query: 181 RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ 240
           RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ
Sbjct: 181 RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ 240

Query: 241 RDQTNKEEEESWLQELAASLM 261
            DQTNKEEEESWLQELA SLM
Sbjct: 241 IDQTNKEEEESWLQELATSLM 260

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BLAST of Cmc11g0302861 vs. NCBI nr
Match: XP_038902616.1 (zinc finger protein CONSTANS-LIKE 1-like [Benincasa hispida])

HSP 1 Score: 442.2 bits (1136), Expect = 3.2e-120
Identity = 233/273 (85.35%), Postives = 244/273 (89.38%), Query Frame = 0


Query: 1   MASFPHNFYSD-LYPNNFSDLQTLLMAAGDSGMCGIRNNNNNNNNIDLFVSREETFIPFF 60
           MASFPH FYSD LYPNN SDLQ+LLMA GD+GMC +RNNNNNN +  L   REETF+P F
Sbjct: 1   MASFPH-FYSDLLYPNNLSDLQSLLMAVGDTGMCDLRNNNNNNIDFSL---REETFVPSF 60

Query: 61  DQTVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFN-MSTYDIHSLIT-CQPQV 120
           DQTVSPEQSSSDT LSP LTMQ+PDLYG VSDM VPSLPEFN MSTYDIHSLI+  QPQV
Sbjct: 61  DQTVSPEQSSSDT-LSPLLTMQYPDLYGSVSDMAVPSLPEFNTMSTYDIHSLISNNQPQV 120

Query: 121 PGTCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERIVRYL 180
           PGTCNY +E LGFVPELKPLYRDTWG+QSRYE   VEETNIKVASRYSEEERKERIVRYL
Sbjct: 121 PGTCNYSEEFLGFVPELKPLYRDTWGSQSRYEMQGVEETNIKVASRYSEEERKERIVRYL 180

Query: 181 KKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLI 240
           KKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCD D EIPLKTN+ +TP HNLI
Sbjct: 181 KKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDTD-EIPLKTNKLTTPTHNLI 240

Query: 241 KQRDQTNKEEEESWLQELAASLMYLPYVTNYGM 271
           KQRDQ NKEEEESWLQELAASLMYLPYVTNYGM
Sbjct: 241 KQRDQMNKEEEESWLQELAASLMYLPYVTNYGM 267

[Close]

BLAST of Cmc11g0302861 vs. NCBI nr
Match: XP_023511907.1 (zinc finger protein CONSTANS-LIKE 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 364.0 bits (933), Expect = 1.1e-96
Identity = 206/274 (75.18%), Postives = 218/274 (79.56%), Query Frame = 0


Query: 1   MASFPHNFYSD-LYPNNFSDLQTLLMAAGDSGMCGIRNNN--NNNNNIDLFVSREETFIP 60
           MASFPH FYSD LYPNNFSDLQTLLMAAGD G+ GIRNNN  NNNNNIDL    EETF+P
Sbjct: 1   MASFPH-FYSDLLYPNNFSDLQTLLMAAGDPGIGGIRNNNDDNNNNNIDL-PRGEETFVP 60

Query: 61  FFDQTVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLITCQPQV 120
            FD+  S E   SDT  SP LTM +PDL       T+PS PEFN   Y IHS+I  QPQV
Sbjct: 61  AFDRMASFE---SDT-QSPLLTMPYPDL-------TLPSSPEFNKGMYGIHSVIGNQPQV 120

Query: 121 PGTCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERIVRYL 180
           PG+CNY DELLGFVP+LKP YR+ WG QS YE H VEETNIKVASRYSEEERKERIVRYL
Sbjct: 121 PGSCNYDDELLGFVPDLKPFYRNIWGPQSSYEMHGVEETNIKVASRYSEEERKERIVRYL 180

Query: 181 KKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLI 240
           KKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCD   EIPLK N  + P+HN  
Sbjct: 181 KKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDT--EIPLKINHLTAPSHN-- 240

Query: 241 KQRDQTNK-EEEESWLQELAASLMYLPYVTNYGM 271
               QTNK EEEESWLQELAASLMYLPYVTNYG+
Sbjct: 241 ----QTNKEEEEESWLQELAASLMYLPYVTNYGV 253

[Close]

BLAST of Cmc11g0302861 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.0e-05
Identity = 30/86 (34.88%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 128 LGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERIVRYLKKRNQRNFNK 187
           LG VPE      D   +  R      ++     A   S  +R+ R++RY +K+  R F K
Sbjct: 247 LGVVPE--STTSDATVSNPRSPKAVTDQPPYPPAQMLSPRDREARVLRYREKKKMRKFEK 306

Query: 188 TIKYACRKTLADRRTRVRGRFARNNN 214
           TI+YA RK  A++R R++GRFA+  +
Sbjct: 307 TIRYASRKAYAEKRPRIKGRFAKKKD 330

[Close]

BLAST of Cmc11g0302861 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 1.0e-04
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 168 ERKERIVRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDND 220
           ER+ R++RY +KR  R F KTI+YA RK  A+ R R++GRFA+  +    ND
Sbjct: 294 EREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESND 345

[Close]

BLAST of Cmc11g0302861 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-04
Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 154 EETNIKV-ASRYSEEERKERIVRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNN 213
           E TN +  A + S  ER+ R++RY +KR  R F KTI+YA RK  A+ R R++GRFA+  
Sbjct: 213 EMTNTETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRT 272

[Close]

BLAST of Cmc11g0302861 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-04
Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 165 SEEERKERIVRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFAR 211
           S  +R+ R++RY +KR  R F KTI+YA RK  A+ R R++GRFA+
Sbjct: 281 SSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAK 326

[Close]

BLAST of Cmc11g0302861 vs. ExPASy Swiss-Prot
Match: Q96502 (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.8e-04
Identity = 23/52 (44.23%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 159 KVASRYSEEERKERIVRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFAR 211
           +V  + +  ER+ R++RY +K+  R F+KTI+YA RK  A+ R R++GRFA+
Sbjct: 268 QVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAK 319

[Close]

BLAST of Cmc11g0302861 vs. ExPASy TrEMBL
Match: A0A0A0KGC0 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G138620 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 3.6e-141
Identity = 252/271 (92.99%), Postives = 260/271 (95.94%), Query Frame = 0


Query: 1   MASFPHNFYSDL-YPNNFSDLQTLLMAAGDSGMCGIRNNNNNNNNIDLFVSREETFIPFF 60
           MASFPHNFY DL YPNNFSDLQTLLMAAGD+GMCGIR NN+NN+NIDLFVSREETF+  F
Sbjct: 1   MASFPHNFYPDLPYPNNFSDLQTLLMAAGDTGMCGIR-NNHNNDNIDLFVSREETFVSSF 60

Query: 61  DQTVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLITCQPQVPG 120
           DQTVSP+QSSSDT LSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLI CQPQVPG
Sbjct: 61  DQTVSPDQSSSDTSLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLINCQPQVPG 120

Query: 121 TCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERIVRYLKK 180
           TCNYGD+L+GFVPELKPLYRDTWGNQSRYE HAVEETNIKVASRYSEEERKERIVRYLKK
Sbjct: 121 TCNYGDQLIGFVPELKPLYRDTWGNQSRYEIHAVEETNIKVASRYSEEERKERIVRYLKK 180

Query: 181 RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ 240
           RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ
Sbjct: 181 RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ 240

Query: 241 RDQTNKEEEESWLQELAASLMYLPYVTNYGM 271
            DQTNKEEEESWLQELA SLMYLPYV NYG+
Sbjct: 241 IDQTNKEEEESWLQELATSLMYLPYVANYGV 270

[Close]

BLAST of Cmc11g0302861 vs. ExPASy TrEMBL
Match: A0A1S4E134 (uncharacterized protein LOC103496299 OS=Cucumis melo OX=3656 GN=LOC103496299 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 3.5e-136
Identity = 243/246 (98.78%), Postives = 244/246 (99.19%), Query Frame = 0


Query: 1   MASFPHNFYSDLYPNNFSDLQTLLMAAGDSGMCGIR-NNNNNNNNIDLFVSREETFIPFF 60
           MASFPHNFYSDLYPNNFSDLQTLLMAAGDSGMCGIR NNNNNNNNIDLFVSREETFIPFF
Sbjct: 1   MASFPHNFYSDLYPNNFSDLQTLLMAAGDSGMCGIRNNNNNNNNNIDLFVSREETFIPFF 60

Query: 61  DQTVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLITCQPQVPG 120
           DQTVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLI+CQPQVPG
Sbjct: 61  DQTVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLISCQPQVPG 120

Query: 121 TCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERIVRYLKK 180
           TCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERIVRYLKK
Sbjct: 121 TCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERIVRYLKK 180

Query: 181 RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ 240
           RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ
Sbjct: 181 RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ 240

Query: 241 RDQTNK 246
           RDQT K
Sbjct: 241 RDQTGK 246

[Close]

BLAST of Cmc11g0302861 vs. ExPASy TrEMBL
Match: A0A6J1FX75 (zinc finger protein CONSTANS-LIKE 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448335 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.5e-94
Identity = 200/272 (73.53%), Postives = 216/272 (79.41%), Query Frame = 0


Query: 1   MASFPHNFYSD-LYPNNFSDLQTLLMAAGDSGMCGIRNNNNNNNNIDLFVSREETFIPFF 60
           MASFPH FYSD LYPNNFSDLQ+LLMAAGD G+ GIRN+++NNNNI+L    EETF+   
Sbjct: 1   MASFPH-FYSDHLYPNNFSDLQSLLMAAGDPGIGGIRNDDDNNNNINL-PHGEETFVSTL 60

Query: 61  DQTVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLITCQPQVPG 120
           DQ  S E   SDT  SP LTM +PDL       TVPS PEFN   Y IHS+I  QP+VPG
Sbjct: 61  DQMASFE---SDT-QSPLLTMPYPDL-------TVPSSPEFNKGMYGIHSVIGNQPRVPG 120

Query: 121 TCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERIVRYLKK 180
           +CNY DELLGFVP+LKP YR+ WG QS YE H VEETNIKVASRYSEEERKERIVRYLKK
Sbjct: 121 SCNYDDELLGFVPDLKPFYRNIWGTQSSYELHGVEETNIKVASRYSEEERKERIVRYLKK 180

Query: 181 RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ 240
           RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCD   EI LKTN  + P+HN    
Sbjct: 181 RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDT--EIHLKTNHLTAPSHN---- 240

Query: 241 RDQTNK-EEEESWLQELAASLMYLPYVTNYGM 271
             QTNK EEEESWLQELAASLMYLPYVTNYG+
Sbjct: 241 --QTNKEEEEESWLQELAASLMYLPYVTNYGV 251

[Close]

BLAST of Cmc11g0302861 vs. ExPASy TrEMBL
Match: A0A6J1JCW3 (uncharacterized protein LOC111483882 OS=Cucurbita maxima OX=3661 GN=LOC111483882 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 2.0e-91
Identity = 200/272 (73.53%), Postives = 211/272 (77.57%), Query Frame = 0


Query: 1   MASFPHNFYSD-LYPNNFSDLQTLLMAAGDSGMCGIRNNNNNNNNIDLFVSREETFIPFF 60
           MASFPH FYSD LYPNNFSDLQ+LLMAAGD  + GIR N+NNNNNIDL    EETF+P F
Sbjct: 1   MASFPH-FYSDLLYPNNFSDLQSLLMAAGDPRVGGIR-NDNNNNNIDL-PRGEETFVPSF 60

Query: 61  DQTVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLITCQPQVPG 120
           DQ  S E   SDT  SP LTM +PDL       TVPS PEFN   Y IHS+   QP  P 
Sbjct: 61  DQMASFE---SDT-QSPLLTMPYPDL-------TVPSSPEFNKGMYGIHSVSDSQP--PA 120

Query: 121 TCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERIVRYLKK 180
           +CNY DELL FVP LKP YR+ WG QS YE H VEETNIKVASRYSEEERKERIVRYLKK
Sbjct: 121 SCNYDDELLHFVPNLKPFYRNIWGTQSSYEMHGVEETNIKVASRYSEEERKERIVRYLKK 180

Query: 181 RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPNHNLIKQ 240
           RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCD   EIPLKTN  + P+HN    
Sbjct: 181 RNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDT--EIPLKTNHLTAPSHN---- 240

Query: 241 RDQTNK-EEEESWLQELAASLMYLPYVTNYGM 271
             QTNK EEEESWLQELAASLMYLPYVTNYG+
Sbjct: 241 --QTNKEEEEESWLQELAASLMYLPYVTNYGV 248

[Close]

BLAST of Cmc11g0302861 vs. ExPASy TrEMBL
Match: A0A5D3CAR3 (Zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00440 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 4.6e-88
Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 25  MAAGDSGMCGIR-NNNNNNNNIDLFVSREETFIPFFDQTVSPEQSSSDTGLSPFLTMQHP 84
           MAAGDSGMCGIR NNNNNNNNIDLFVSREETFIPFFDQTVSPEQSSSDTGLSPFLTMQHP
Sbjct: 1   MAAGDSGMCGIRNNNNNNNNNIDLFVSREETFIPFFDQTVSPEQSSSDTGLSPFLTMQHP 60

Query: 85  DLYGPVSDMTVPSLPEFNMSTYDIHSLITCQPQVPGTCNYGDELLGFVPELKPLYRDTWG 144
           DLYGPVSDMTVPSLPEFNMSTYDIHSLI+CQPQVPGTCNYGDELLGFVPELKPLYRDTWG
Sbjct: 61  DLYGPVSDMTVPSLPEFNMSTYDIHSLISCQPQVPGTCNYGDELLGFVPELKPLYRDTWG 120

Query: 145 NQSRYETHAVEETNIKVASRYSEEERKERIVRYLKKRNQRNFNKTIK 191
           NQSRYETHAVEETNIKVASRYSEEERKERIVRYLKKRNQRNFNKTIK
Sbjct: 121 NQSRYETHAVEETNIKVASRYSEEERKERIVRYLKKRNQRNFNKTIK 167

[Close]

BLAST of Cmc11g0302861 vs. TAIR 10
Match: AT3G12890.1 (activator of spomin::LUC2 )

HSP 1 Score: 119.0 bits (297), Expect = 5.8e-27
Identity = 92/224 (41.07%), Postives = 119/224 (53.12%), Query Frame = 0


Query: 53  ETFIPFFDQTVSPEQSSS-----DTGLSPFLTMQHPD-LYGP-VSDMTVPSLPEFNMSTY 112
           ET   F   +  P+  SS     D     F T  +P+ ++ P V  ++  S+PE+N + Y
Sbjct: 18  ETSSQFHGSSSCPDVDSSLSSYLDDCYGSFNTSSNPESIFVPQVFGISDVSVPEYN-NYY 77

Query: 113 DIHSLITCQPQVPGTCNYGD--ELLGFVPELKPLYRDTWGNQS--RYETHAVEETNIKVA 172
              S+        G    GD  E  GF PE+KPL+R   G QS    E     E N KV 
Sbjct: 78  QKMSVNNATHYFHG----GDHQEYYGFSPEIKPLFRPATGEQSWGNSEGGIQAEPNTKV- 137

Query: 173 SRYSEEERKERIVRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHE 232
            RYS EERK+RI+RYLKK+NQRNFNKTIKY CRKTLADRR RVRGRFAR NN+ C+    
Sbjct: 138 GRYSVEERKDRIMRYLKKKNQRNFNKTIKYVCRKTLADRRVRVRGRFAR-NNDTCEEQPH 197

Query: 233 IPLKTNQFSTPNHNLIKQRDQ--TNKEEEESWLQELAASLMYLP 264
           +    N  S    ++    D      E ++ WL E  ++L+  P
Sbjct: 198 MSKNHNNHSEKEEDMFSGSDDYLIQMEHDDGWLHEAMSNLIPFP 234

[Close]

BLAST of Cmc11g0302861 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 79.7 bits (195), Expect = 3.9e-15
Identity = 47/74 (63.51%), Postives = 54/74 (72.97%), Query Frame = 0


Query: 154 EETNIKVASRYSEEERKERIVRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNN 213
           EE N KV  RYS EERKE+I +Y  KRNQRNF KTIKYACRKTLAD R R+RGRFARN+ 
Sbjct: 201 EEQNFKV-GRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIRGRFARNDE 260

Query: 214 -----ELCDNDHEI 223
                 + D+D E+
Sbjct: 261 VVEIPNIEDDDSEL 273

[Close]

BLAST of Cmc11g0302861 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 76.6 bits (187), Expect = 3.3e-14
Identity = 58/126 (46.03%), Postives = 70/126 (55.56%), Query Frame = 0


Query: 133 ELKPLYRDTWGNQSRYETHAVEETNIKVAS---------RYSEEERKERIVRYLKKRNQR 192
           +L+ L RD  G +S     A E +   V S         RYS EERKE+I +Y  KR QR
Sbjct: 147 DLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRYSSEERKEKISKYRAKRTQR 206

Query: 193 NFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFS-TPNHNLIKQRDQ 249
           NF KTIKYACRKTLAD R RVRGRFARN     D   E P   + F+   N + +   D 
Sbjct: 207 NFTKTIKYACRKTLADNRPRVRGRFARN-----DEVFENPKIASSFTRQENDDDLWNLDG 266

[Close]

BLAST of Cmc11g0302861 vs. TAIR 10
Match: AT1G04500.1 (CCT motif family protein )

HSP 1 Score: 76.3 bits (186), Expect = 4.3e-14
Identity = 41/79 (51.90%), Postives = 54/79 (68.35%), Query Frame = 0


Query: 149 ETHAVEETNIKVASRYSEEERKERIVRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRF 208
           E   +++ +     + S E+RKE+I RY+KKRN+RNF+K IKYACRKTLAD R RVRGRF
Sbjct: 268 EITGLDDPSFNKVGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRF 327

Query: 209 ARN------NNELCDNDHE 222
           A+N      N + C + HE
Sbjct: 328 AKNDEFGEPNRQACSSHHE 346

[Close]

BLAST of Cmc11g0302861 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 76.3 bits (186), Expect = 4.3e-14
Identity = 45/101 (44.55%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 149 ETHAVEETNIKVASRYSEEERKERIVRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRF 208
           + + +E++ +    + S E+RKE+I RY+KKRN+RNFNK IKYACRKTLAD R RVRGRF
Sbjct: 291 DINGLEDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRF 350

Query: 209 ARNNNELCDNDHEIPLKTNQFSTPNHNLIKQRDQTNKEEEE 250
           A+N+        E      Q  + +H+   + D   K+EE+
Sbjct: 351 AKND--------EFGEPNRQAFSSHHDDEDEDDMGVKDEEQ 383

The following BLAST results are available for this feature:

BLAST of Cmc11g0302861 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150045.2	7.4e-141	92.99	uncharacterized protein LOC101221095 [Cucumis sativus]	[more]
XP_016901933.1	7.2e-136	98.78	PREDICTED: uncharacterized protein LOC103496299 [Cucumis melo]	[more]
KAE8646876.1	4.6e-135	93.49	hypothetical protein Csa_021098 [Cucumis sativus]	[more]
XP_038902616.1	3.2e-120	85.35	zinc finger protein CONSTANS-LIKE 1-like [Benincasa hispida]	[more]
XP_023511907.1	1.1e-96	75.18	zinc finger protein CONSTANS-LIKE 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc11g0302861 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O50055	8.0e-05	34.88	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]
Q940T9	1.0e-04	48.08	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]
Q9SK53	1.8e-04	45.90	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
Q9FHH8	4.0e-04	50.00	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2...	[more]
Q96502	6.8e-04	44.23	Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1...	[more]

BLAST of Cmc11g0302861 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGC0	3.6e-141	92.99	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G138620 PE=4 SV...	[more]
A0A1S4E134	3.5e-136	98.78	uncharacterized protein LOC103496299 OS=Cucumis melo OX=3656 GN=LOC103496299 PE=...	[more]
A0A6J1FX75	2.5e-94	73.53	zinc finger protein CONSTANS-LIKE 1-like isoform X1 OS=Cucurbita moschata OX=366...	[more]
A0A6J1JCW3	2.0e-91	73.53	uncharacterized protein LOC111483882 OS=Cucurbita maxima OX=3661 GN=LOC111483882...	[more]
A0A5D3CAR3	4.6e-88	98.80	Zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Cmc11g0302861 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12890.1	5.8e-27	41.07	activator of spomin::LUC2	[more]
AT5G41380.1	3.9e-15	63.51	CCT motif family protein	[more]
AT1G63820.1	3.3e-14	46.03	CCT motif family protein	[more]
AT1G04500.1	4.3e-14	51.90	CCT motif family protein	[more]
AT2G33350.1	4.3e-14	44.55	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 169..211 e-value: 1.8E-16 score: 59.9
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 169..211 score: 14.882043
None	No IPR available	PANTHER	PTHR31717:SF56	ACTIVATOR OF SPOMIN::LUC2	coord: 1..266
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 1..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0302861.1	Cmc11g0302861.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding