Cmc11g0302661 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCCCCACCATCTACATATTATTTGCCAGCAAATACATTGTTCTTTAAGATTCTCCCCACAAACAAAAAACAGAGTGGCCAAACCCCAAAATTTAAAAATAATTAAAAAAAAATCCTCCATTTATTCATATAACATACAAAGCCTCTGCAAAATTCTCCATTTTTATCCTATTGTGAGAGAAACTGACAGAGAGTTGTTTATTTTATGGAGAAGAAGAAGAAGACAACATGGTCGTTGAAGAAGATGAGCAAAGAGCTATGGCCATGGCGGTTTTCGCTATTCAGAAGAAACCCAATTGATTTTCAAATGATTCATTTTCTCATTGATAATGTCTTCTTCAAGATTGTTTCTGTGGTTGAAGCCATTGTTTTGGTCTCAACTCTCTGTTTCTTCTTACTCTGTTGTGGGGGTCATGTATGATTTTTTCATTTTTCTGTTTGGTTGTTTTTTAGTACCGACAACTGAGGTACGGAGAATGTGAAATACCGAGTTTGTGGATTCTACTTTTCTTTTCTTCTTCCTTTTTTGTATTTTGATCTAGTATTCGGTTTCTCTAGGCTAATTTGTTTGTGGTTTTGTTGTAGTTGTAATTTATGGTGTATGTATTACCAAAGTAACTTCAAAATATTAATATACTCTTTTCTTTCTTTTTTCT TTTCCCCACCATCTACATATTATTTGCCAGCAAATACATTGTTCTTTAAGATTCTCCCCACAAACAAAAAACAGAGTGGCCAAACCCCAAAATTTAAAAATAATTAAAAAAAAATCCTCCATTTATTCATATAACATACAAAGCCTCTGCAAAATTCTCCATTTTTATCCTATTGTGAGAGAAACTGACAGAGAGTTGTTTATTTTATGGAGAAGAAGAAGAAGACAACATGGTCGTTGAAGAAGATGAGCAAAGAGCTATGGCCATGGCGGTTTTCGCTATTCAGAAGAAACCCAATTGATTTTCAAATGATTCATTTTCTCATTGATAATGTCTTCTTCAAGATTGTTTCTGTGGTTGAAGCCATTGTTTTGGTCTCAACTCTCTGTTTCTTCTTACTCTGTTGTGGGGGTCATGTATGATTTTTTCATTTTTCTGTTTGGTTGTTTTTTAGTACCGACAACTGAGGTACGGAGAATGTGAAATACCGAGTTTGTGGATTCTACTTTTCTTTTCTTCTTCCTTTTTTGTATTTTGATCTAGTATTCGGTTTCTCTAGGCTAATTTGTTTGTGGTTTTGTTGTAGTTGTAATTTATGGTGTATGTATTACCAAAGTAACTTCAAAATATTAATATACTCTTTTCTTTCTTTTTTCT ATGGAGAAGAAGAAGAAGACAACATGGTCGTTGAAGAAGATGAGCAAAGAGCTATGGCCATGGCGGTTTTCGCTATTCAGAAGAAACCCAATTGATTTTCAAATGATTCATTTTCTCATTGATAATGTCTTCTTCAAGATTGTTTCTGTGGTTGAAGCCATTGTTTTGGTCTCAACTCTCTGTTTCTTCTTACTCTGTTGTGGGGGTCATGTATGA MEKKKKTTWSLKKMSKELWPWRFSLFRRNPIDFQMIHFLIDNVFFKIVSVVEAIVLVSTLCFFLLCCGGHV Homology
BLAST of Cmc11g0302661 vs. NCBI nr
Match: KAG7010430.1 (hypothetical protein SDJN02_27223, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 112.8 bits (281), Expect = 1.2e-21 Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0
BLAST of Cmc11g0302661 vs. NCBI nr
Match: KAG6570577.1 (Conserved oligomeric Golgi complex subunit 5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 92.8 bits (229), Expect = 1.3e-15 Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of Cmc11g0302661 vs. NCBI nr
Match: XP_015880074.1 (uncharacterized protein LOC107416129 [Ziziphus jujuba]) HSP 1 Score: 82.8 bits (203), Expect = 1.3e-12 Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of Cmc11g0302661 vs. NCBI nr
Match: KAF3444994.1 (hypothetical protein FNV43_RR14687 [Rhamnella rubrinervis]) HSP 1 Score: 82.4 bits (202), Expect = 1.7e-12 Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 0
BLAST of Cmc11g0302661 vs. NCBI nr
Match: XP_009356611.1 (PREDICTED: uncharacterized protein LOC103947429 [Pyrus x bretschneideri] >KAB2613298.1 hypothetical protein D8674_035614 [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 81.3 bits (199), Expect = 3.8e-12 Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Cmc11g0302661 vs. ExPASy TrEMBL
Match: A0A6P3ZJJ1 (uncharacterized protein LOC107416129 OS=Ziziphus jujuba OX=326968 GN=LOC107416129 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 6.3e-13 Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of Cmc11g0302661 vs. ExPASy TrEMBL
Match: A0A5N5GDC0 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_035614 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.8e-12 Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Cmc11g0302661 vs. ExPASy TrEMBL
Match: A0A5N5GCW0 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_035612 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.4e-12 Identity = 43/70 (61.43%), Postives = 56/70 (80.00%), Query Frame = 0
BLAST of Cmc11g0302661 vs. ExPASy TrEMBL
Match: A0A540L2J6 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_033787 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 7.0e-12 Identity = 43/70 (61.43%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of Cmc11g0302661 vs. ExPASy TrEMBL
Match: M5WY93 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G175200 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 9.1e-12 Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of Cmc11g0302661 vs. TAIR 10
Match: AT1G06475.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 5.7e-06 Identity = 22/41 (53.66%), Postives = 31/41 (75.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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