Cmc11g0302661 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0302661
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Transmembrane protein, putative
Location	CMiso1.1chr11: 23682210 .. 23682866 (+)
RNA-Seq Expression	Cmc11g0302661
Synteny	Cmc11g0302661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCCCACCATCTACATATTATTTGCCAGCAAATACATTGTTCTTTAAGATTCTCCCCACAAACAAAAAACAGAGTGGCCAAACCCCAAAATTTAAAAATAATTAAAAAAAAATCCTCCATTTATTCATATAACATACAAAGCCTCTGCAAAATTCTCCATTTTTATCCTATTGTGAGAGAAACTGACAGAGAGTTGTTTATTTTATGGAGAAGAAGAAGAAGACAACATGGTCGTTGAAGAAGATGAGCAAAGAGCTATGGCCATGGCGGTTTTCGCTATTCAGAAGAAACCCAATTGATTTTCAAATGATTCATTTTCTCATTGATAATGTCTTCTTCAAGATTGTTTCTGTGGTTGAAGCCATTGTTTTGGTCTCAACTCTCTGTTTCTTCTTACTCTGTTGTGGGGGTCATGTATGATTTTTTCATTTTTCTGTTTGGTTGTTTTTTAGTACCGACAACTGAGGTACGGAGAATGTGAAATACCGAGTTTGTGGATTCTACTTTTCTTTTCTTCTTCCTTTTTTGTATTTTGATCTAGTATTCGGTTTCTCTAGGCTAATTTGTTTGTGGTTTTGTTGTAGTTGTAATTTATGGTGTATGTATTACCAAAGTAACTTCAAAATATTAATATACTCTTTTCTTTCTTTTTTCT

mRNA sequence

TTTCCCCACCATCTACATATTATTTGCCAGCAAATACATTGTTCTTTAAGATTCTCCCCACAAACAAAAAACAGAGTGGCCAAACCCCAAAATTTAAAAATAATTAAAAAAAAATCCTCCATTTATTCATATAACATACAAAGCCTCTGCAAAATTCTCCATTTTTATCCTATTGTGAGAGAAACTGACAGAGAGTTGTTTATTTTATGGAGAAGAAGAAGAAGACAACATGGTCGTTGAAGAAGATGAGCAAAGAGCTATGGCCATGGCGGTTTTCGCTATTCAGAAGAAACCCAATTGATTTTCAAATGATTCATTTTCTCATTGATAATGTCTTCTTCAAGATTGTTTCTGTGGTTGAAGCCATTGTTTTGGTCTCAACTCTCTGTTTCTTCTTACTCTGTTGTGGGGGTCATGTATGATTTTTTCATTTTTCTGTTTGGTTGTTTTTTAGTACCGACAACTGAGGTACGGAGAATGTGAAATACCGAGTTTGTGGATTCTACTTTTCTTTTCTTCTTCCTTTTTTGTATTTTGATCTAGTATTCGGTTTCTCTAGGCTAATTTGTTTGTGGTTTTGTTGTAGTTGTAATTTATGGTGTATGTATTACCAAAGTAACTTCAAAATATTAATATACTCTTTTCTTTCTTTTTTCT

Coding sequence (CDS)

ATGGAGAAGAAGAAGAAGACAACATGGTCGTTGAAGAAGATGAGCAAAGAGCTATGGCCATGGCGGTTTTCGCTATTCAGAAGAAACCCAATTGATTTTCAAATGATTCATTTTCTCATTGATAATGTCTTCTTCAAGATTGTTTCTGTGGTTGAAGCCATTGTTTTGGTCTCAACTCTCTGTTTCTTCTTACTCTGTTGTGGGGGTCATGTATGA

Protein sequence

MEKKKKTTWSLKKMSKELWPWRFSLFRRNPIDFQMIHFLIDNVFFKIVSVVEAIVLVSTLCFFLLCCGGHV

Homology

[Close]

BLAST of Cmc11g0302661 vs. NCBI nr
Match: KAG7010430.1 (hypothetical protein SDJN02_27223, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-21
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 5  KKTTWSLKKMSKELWPWRFSLFRRNPIDFQMIHFLIDNVFFKIVSVVEAIVLVSTLCFFL 64
          KK TWSLKK+ KELWPWRFSLF RNP+D +MIHF++DNVFFKIVSVVEAIVLVSTLCFF 
Sbjct: 3  KKKTWSLKKVRKELWPWRFSLFGRNPMDLRMIHFVVDNVFFKIVSVVEAIVLVSTLCFFY 62

Query: 65 LCCG 69
          LCCG
Sbjct: 63 LCCG 66

[Close]

BLAST of Cmc11g0302661 vs. NCBI nr
Match: KAG6570577.1 (Conserved oligomeric Golgi complex subunit 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-15
Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 0


Query: 5  KKTTWSLKKMSKELWPWRFSLFRRNPIDFQMIHFLIDNVFFKIVSVVEAIVLVS 59
          KK TWSLKK+ KELWPWRFSLF RNP+D QMIHF++DNVFFKIVSVVEAIVL S
Sbjct: 3  KKKTWSLKKVRKELWPWRFSLFGRNPMDLQMIHFVVDNVFFKIVSVVEAIVLFS 56

[Close]

BLAST of Cmc11g0302661 vs. NCBI nr
Match: XP_015880074.1 (uncharacterized protein LOC107416129 [Ziziphus jujuba])

HSP 1 Score: 82.8 bits (203), Expect = 1.3e-12
Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 0


Query: 5  KKTTWSLKKMSKELWPWRFS-LFRRNPIDFQMIHFLIDNVFFKIVSVVEAIVLVSTLCFF 64
          KK +WSLKK+SKELWPWRFS +F+    D Q+   +ID V FKI+SVVEA+VLVSTLCFF
Sbjct: 4  KKKSWSLKKVSKELWPWRFSAIFKWKRDDSQL--NIIDGVVFKILSVVEAVVLVSTLCFF 63

Query: 65 LLCCGGH 71
           LCCG H
Sbjct: 64 FLCCGCH 68

[Close]

BLAST of Cmc11g0302661 vs. NCBI nr
Match: KAF3444994.1 (hypothetical protein FNV43_RR14687 [Rhamnella rubrinervis])

HSP 1 Score: 82.4 bits (202), Expect = 1.7e-12
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 8  TWSLKKMSKELWPWRFSLFRRNPIDFQMIHFLIDNVFFKIVSVVEAIVLVSTLCFFLLCC 67
          TWSLK++SKELWPW+FS+FR    +FQ    ++D+V FKI+ VVEA+VLVSTLCFF LCC
Sbjct: 3  TWSLKRVSKELWPWKFSVFRWKRREFQ--PNIVDDVVFKILYVVEAVVLVSTLCFFYLCC 62

Query: 68 GGH 71
          G H
Sbjct: 63 GCH 63

[Close]

BLAST of Cmc11g0302661 vs. NCBI nr
Match: XP_009356611.1 (PREDICTED: uncharacterized protein LOC103947429 [Pyrus x bretschneideri] >KAB2613298.1 hypothetical protein D8674_035614 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 81.3 bits (199), Expect = 3.8e-12
Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 3  KKKKTTWSLKK-MSKELWPWRFSLFRRNPIDFQMIHFLIDNVFFKIVSVVEAIVLVSTLC 62
          KK+K  WSLKK +SKELWP +FS+F+   ++FQ+   ++D+V FKI+SVVEA+VLVSTLC
Sbjct: 13 KKEKAAWSLKKVISKELWPRKFSVFKWKRVNFQIT--ILDDVVFKILSVVEAVVLVSTLC 72

Query: 63 FFLLCCGGHV 72
          FF LCCG H+
Sbjct: 73 FFYLCCGCHI 80

[Close]

BLAST of Cmc11g0302661 vs. ExPASy TrEMBL
Match: A0A6P3ZJJ1 (uncharacterized protein LOC107416129 OS=Ziziphus jujuba OX=326968 GN=LOC107416129 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 6.3e-13
Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 0


Query: 5  KKTTWSLKKMSKELWPWRFS-LFRRNPIDFQMIHFLIDNVFFKIVSVVEAIVLVSTLCFF 64
          KK +WSLKK+SKELWPWRFS +F+    D Q+   +ID V FKI+SVVEA+VLVSTLCFF
Sbjct: 4  KKKSWSLKKVSKELWPWRFSAIFKWKRDDSQL--NIIDGVVFKILSVVEAVVLVSTLCFF 63

Query: 65 LLCCGGH 71
           LCCG H
Sbjct: 64 FLCCGCH 68

[Close]

BLAST of Cmc11g0302661 vs. ExPASy TrEMBL
Match: A0A5N5GDC0 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_035614 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.8e-12
Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 3  KKKKTTWSLKK-MSKELWPWRFSLFRRNPIDFQMIHFLIDNVFFKIVSVVEAIVLVSTLC 62
          KK+K  WSLKK +SKELWP +FS+F+   ++FQ+   ++D+V FKI+SVVEA+VLVSTLC
Sbjct: 13 KKEKAAWSLKKVISKELWPRKFSVFKWKRVNFQIT--ILDDVVFKILSVVEAVVLVSTLC 72

Query: 63 FFLLCCGGHV 72
          FF LCCG H+
Sbjct: 73 FFYLCCGCHI 80

[Close]

BLAST of Cmc11g0302661 vs. ExPASy TrEMBL
Match: A0A5N5GCW0 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_035612 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.4e-12
Identity = 43/70 (61.43%), Postives = 56/70 (80.00%), Query Frame = 0


Query: 3  KKKKTTWSLKK-MSKELWPWRFSLFRRNPIDFQMIHFLIDNVFFKIVSVVEAIVLVSTLC 62
          KK+K  WSLKK +SKELWP +FS+F+   + FQ+   ++D+V FKI+SVVEA+VLVSTLC
Sbjct: 13 KKEKAAWSLKKVISKELWPRKFSVFKWKRVSFQIA--ILDDVVFKILSVVEAVVLVSTLC 72

Query: 63 FFLLCCGGHV 72
          FF LCCG H+
Sbjct: 73 FFYLCCGCHI 80

[Close]

BLAST of Cmc11g0302661 vs. ExPASy TrEMBL
Match: A0A540L2J6 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_033787 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.0e-12
Identity = 43/70 (61.43%), Postives = 53/70 (75.71%), Query Frame = 0


Query: 3  KKKKTTWSLKK-MSKELWPWRFSLFRRNPIDFQMIHFLIDNVFFKIVSVVEAIVLVSTLC 62
          KK+K  WSLKK +SKELWP +FS F+   +DFQ    ++D V FKI+SVVEA+VLVS LC
Sbjct: 13 KKEKAAWSLKKVISKELWPRKFSAFKWKRVDFQTT--ILDGVVFKILSVVEAVVLVSALC 72

Query: 63 FFLLCCGGHV 72
          FF LCCG H+
Sbjct: 73 FFYLCCGCHI 80

[Close]

BLAST of Cmc11g0302661 vs. ExPASy TrEMBL
Match: M5WY93 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G175200 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 9.1e-12
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 0


Query: 3  KKKKTTWSLKK-MSKELWPWRFSLFRRNPIDFQMIHFLIDNVFFKIVSVVEAIVLVSTLC 62
          KK+K  WSLKK +SKELWP +FS+F+   +DFQ    ++D+V FK++S VE +VLVSTLC
Sbjct: 10 KKEKAVWSLKKVISKELWPRKFSVFKWKRLDFQTT--IVDDVVFKVLSAVEVVVLVSTLC 69

Query: 63 FFLLCCGGHV 72
          FF LCCG H+
Sbjct: 70 FFYLCCGCHI 77

[Close]

BLAST of Cmc11g0302661 vs. TAIR 10
Match: AT1G06475.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 5.7e-06
Identity = 22/41 (53.66%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 31 IDFQMIHFLIDNVFFKIVSVVEAIVLVSTLCFFLLCCGGHV 72
          ++  M+  ++D V +K++ VVEA VLVSTLCFF LCCG H+
Sbjct: 53 VEIIMLTEIVDGVVYKVMYVVEAFVLVSTLCFFYLCCGCHI 93

The following BLAST results are available for this feature:

BLAST of Cmc11g0302661 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010430.1	1.2e-21	84.38	hypothetical protein SDJN02_27223, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6570577.1	1.3e-15	83.33	Conserved oligomeric Golgi complex subunit 5, partial [Cucurbita argyrosperma su...	[more]
XP_015880074.1	1.3e-12	67.16	uncharacterized protein LOC107416129 [Ziziphus jujuba]	[more]
KAF3444994.1	1.7e-12	65.08	hypothetical protein FNV43_RR14687 [Rhamnella rubrinervis]	[more]
XP_009356611.1	3.8e-12	61.43	PREDICTED: uncharacterized protein LOC103947429 [Pyrus x bretschneideri] >KAB261...	[more]

BLAST of Cmc11g0302661 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0302661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P3ZJJ1	6.3e-13	67.16	uncharacterized protein LOC107416129 OS=Ziziphus jujuba OX=326968 GN=LOC10741612...	[more]
A0A5N5GDC0	1.8e-12	61.43	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]
A0A5N5GCW0	2.4e-12	61.43	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]
A0A540L2J6	7.0e-12	61.43	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_033787 PE=4 SV=1	[more]
M5WY93	9.1e-12	58.57	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G175200 PE=4 SV=1	[more]

BLAST of Cmc11g0302661 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06475.1	5.7e-06	53.66	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33726:SF8	TRANSMEMBRANE PROTEIN	coord: 3..70
None	No IPR available	PANTHER	PTHR33726	TRANSMEMBRANE PROTEIN	coord: 3..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0302661.1	Cmc11g0302661.1	mRNA