Cmc11g0302621 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0302621
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	DUF4219 domain-containing protein/UBN2 domain-containing protein
Location	CMiso1.1chr11: 23653518 .. 23654896 (-)
RNA-Seq Expression	Cmc11g0302621
Synteny	Cmc11g0302621

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTTATCTTCTTCTCTAAGATAACCCTCTGCTGTCGCCGCCTCAGTTGAAGTTAAGATTGGTCTCTTTGGAAGCTTGAGGATTTAAAGTGATGAATTTTTTCATCAAGGATAAGAGGATTTTCCAACCTCCATCTGAGTAACCTTGGTAAGCCAATAAAATTAAATTAATATTTTATTAATTTAATTTTGGATCTATTTGGGTTTTGTGTAAAAGGTTCAATTGGCTAAACTTTTTAAGATCTAAATCTTGGATTTTTCCCAATCAAGGTTGAATTGGTTTCAACCCCAATTTTTAGAAAGTTAATTAATTTGGGAGGATTTTTGGATGTTAGCCAATTGCTAATTTCATTAATTAAGATACTAAGTGTTCCTTTTATGATTAGGATCAAATTAATTGGAGAATTTTACTGTCAACTAGGGAGTACCTTTGTTTGGCTAAAATCTCCAGGTAAGAGATTCTCCTACTAGACCTTCGAACTGAATTTAAGAGACCGCATGTAATTATGATTATGCATTGATGGTAGCTAAAATGCATAACTTGATGCTACTGATAATGACTGTCATTGTATTGATGTTGATGATGATGACTGAGATTATTATGTTGATGATTGATGATGGTGACTGATGTTATGTTAATGACTGATAGATTGATGTTGATGATTGTTAATGCATGATATATTAATCACATGATTAAAGACGTTAAGATTAATACTCATGCCATGTTATGATGTTATGTTATGCTACATGCTATGGATAGGGTGTTCTGTTAACTTTGTCTATTAGAGTCGTACCTGCATGGGTGTCCTTCGGGATCACCACCTATTTAGGACTGTGTGGTTCGACGGGACGCCAGTCTAGCATGGATATAGATATGATTCGAGTGATTCGACGGGGTCCTCGCATCCCGATTGTCTTAGCGTTACCCTCGGGTTCACTACAGACCAGCATGTCCTAGGTGCTCCCTCGGGACACCGAAGACCAGATTTTCGTTCCTACGGGAGCGCATGTTGCACGTGTTCGGGAACGTGCCAGAGATTGGGTACCATTTTCAGGACTCTAATGGGAAGTTAACAGACACCTAGCGGGACTAGTAGTAGGTCCCTTACTGAGTATATGTTTATACTCACTCTTTCTATGTTTAACATTTCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAGAGAAGGATCCGTGACATGCCATATGGGGACTCAATTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAATATTCCGTTTTTAATGAAAAATTTATTCTTCCCTCGTTTCAAAAGTGTCTCTTGTCATTGTTCCTTTTAGTAACGACTTCAGCTTAGTATAAAGAGTTGGGTCGTTACATTTACTTAGTTAT

mRNA sequence

TTCTTTATCTTCTTCTCTAAGATAACCCTCTGCTGTCGCCGCCTCAGTTGAAGTTAAGATTGGTCTCTTTGGAAGCTTGAGGATTTAAAGTGATGAATTTTTTCATCAAGGATAAGAGGATTTTCCAACCTCCATCTGAGTAACCTTGGATCAAATTAATTGGAGAATTTTACTGTCAACTAGGGAGTACCTTTGTTTGGCTAAAATCTCCAGATTATTATGTTGATGATTGATGATGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAGAGAAGGATCCGTGACATGCCATATGGGGACTCAATTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAATATTCCGTTTTTAATGAAAAATTTATTCTTCCCTCGTTTCAAAAGTGTCTCTTGTCATTGTTCCTTTTAGTAACGACTTCAGCTTAGTATAAAGAGTTGGGTCGTTACATTTACTTAGTTAT

Coding sequence (CDS)

ATGTTGATGATTGATGATGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAGAGAAGGATCCGTGACATGCCATATGGGGACTCAATTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAA

Protein sequence

MLMIDDGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

Homology

[Close]

BLAST of Cmc11g0302621 vs. NCBI nr
Match: KAA0063966.1 (hypothetical protein E6C27_scaffold616G001210 [Cucumis melo var. makuwa])

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-11
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 0


Query: 1  MLMIDDGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 41
          +L++  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Sbjct: 18 VLVLPQGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 57

[Close]

BLAST of Cmc11g0302621 vs. NCBI nr
Match: KAA0035872.1 (hypothetical protein E6C27_scaffold56G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 2.4e-11
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 0


Query: 1  MLMIDDGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 41
          +L++  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Sbjct: 24 VLVLPRGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 63

[Close]

BLAST of Cmc11g0302621 vs. NCBI nr
Match: TYJ98810.1 (hypothetical protein E5676_scaffold703G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0


Query: 7  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 41
          GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Sbjct: 28 GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 61

[Close]

BLAST of Cmc11g0302621 vs. NCBI nr
Match: KAA0032396.1 (hypothetical protein E6C27_scaffold219G002730 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0


Query: 7  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 41
          GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Sbjct: 29 GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 62

[Close]

BLAST of Cmc11g0302621 vs. NCBI nr
Match: TYK24101.1 (hypothetical protein E5676_scaffold943G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0


Query: 7  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 41
          GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Sbjct: 56 GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 89

[Close]

BLAST of Cmc11g0302621 vs. ExPASy TrEMBL
Match: A0A5A7VC05 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G001210 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.7e-12
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 0


Query: 1  MLMIDDGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 41
          +L++  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Sbjct: 18 VLVLPQGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 57

[Close]

BLAST of Cmc11g0302621 vs. ExPASy TrEMBL
Match: A0A5A7SXE7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00360 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-11
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 0


Query: 1  MLMIDDGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 41
          +L++  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Sbjct: 24 VLVLPRGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 63

[Close]

BLAST of Cmc11g0302621 vs. ExPASy TrEMBL
Match: A0A5A7VJ46 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00510 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.7e-11
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0


Query: 7  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 41
          GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Sbjct: 61 GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 94

[Close]

BLAST of Cmc11g0302621 vs. ExPASy TrEMBL
Match: A0A5D3BG96 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold703G00090 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.7e-11
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0


Query: 7  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 41
          GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Sbjct: 28 GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 61

[Close]

BLAST of Cmc11g0302621 vs. ExPASy TrEMBL
Match: A0A5D3CKK9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00060 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.7e-11
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0


Query: 7   GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 41
           GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Sbjct: 132 GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF 165

The following BLAST results are available for this feature:

BLAST of Cmc11g0302621 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063966.1	1.4e-11	87.50	hypothetical protein E6C27_scaffold616G001210 [Cucumis melo var. makuwa]	[more]
KAA0035872.1	2.4e-11	87.50	hypothetical protein E6C27_scaffold56G00360 [Cucumis melo var. makuwa]	[more]
TYJ98810.1	1.2e-10	100.00	hypothetical protein E5676_scaffold703G00090 [Cucumis melo var. makuwa]	[more]
KAA0032396.1	1.2e-10	100.00	hypothetical protein E6C27_scaffold219G002730 [Cucumis melo var. makuwa]	[more]
TYK24101.1	1.2e-10	100.00	hypothetical protein E5676_scaffold943G00760 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0302621 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0302621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VC05	6.7e-12	87.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SXE7	1.1e-11	87.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VJ46	5.7e-11	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BG96	5.7e-11	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CKK9	5.7e-11	100.00	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Cmc11g0302621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0302621.1	Cmc11g0302621.1	mRNA