Cmc11g0302471 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0302471
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr11: 23433406 .. 23434237 (+)
RNA-Seq ExpressionCmc11g0302471
SyntenyCmc11g0302471
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCACCTTCAAATGCCGACTTGAGTTCCTCTGCAGTTCCATTCAAAGCATTCACTGCTTTCTCCTTTAACCCACAAATGACTTTGTGTGCTTCCTCAACTTCCTTCTGCAACTGAACCATTTTCGACTCTACCATTTTCGTTTTCTCCTCGGACTCTTTCAACAACTCTTCCACCTTAAGTTTATCCTTGATCCACCTATCTAATTCCAGCCCGTTCTTCGTTATCACTGATTCCAAATCCATGATAGTTTTCTTAAAACTGGAGATTTCTGTCTCCTTCTCCTCGATTCTGTCTCTCATTTCCTCCTCCACCCTAACTTTTTTACTCTTCTCCTCTATCTCCTTGACCTCCAAAACACCAACTTTTCTCTCCAATTCTCTGACTTTCTTTTCACTCTCTGCCTTTGCTTTCTTCAGGGCTTCCAGCTCTTCCTCCATAGCTGTAACGTTGGCTCCTTTTTCGCCCAAACTTTTCCTCAACCTTTCAACTTCAGCATACGCCTCATCGGCTCCATCCATCGTAGATATCAAATCATGTTGTAGCCTGGCGACTTCAGTCTCAAGCTCCAGTGCCCTTGCAGCAACAGACTCTAATACCTTATTTCCCTCTTCAGCGCGTTCAACTTGTTTCTCCATTTCTTTCAGTCGTTCTTTTAGGGTCCCCTCTTCACTCTTCAATCCTTCAATCTCCGCTGACAATCTTTCAATCCTATCTTTAATTTGTTCATTCTCGTCAACCAACTTTTTCTTTTCACGCTCCAAAACTTCAATTCTCTGATTGAGCTCCGCGACCTTTGCGTCATTCTCCCGCTGGTCAACATCATAAAAATCCT

mRNA sequence

GCACCTTCAAATGCCGACTTGAGTTCCTCTGCAGTTCCATTCAAAGCATTCACTGCTTTCTCCTTTAACCCACAAATGACTTTGTGTGCTTCCTCAACTTCCTTCTGCAACTGAACCATTTTCGACTCTACCATTTTCGTTTTCTCCTCGGACTCTTTCAACAACTCTTCCACCTTAAGTTTATCCTTGATCCACCTATCTAATTCCAGCCCGTTCTTCGTTATCACTGATTCCAAATCCATGATAGTTTTCTTAAAACTGGAGATTTCTGTCTCCTTCTCCTCGATTCTGTCTCTCATTTCCTCCTCCACCCTAACTTTTTTACTCTTCTCCTCTATCTCCTTGACCTCCAAAACACCAACTTTTCTCTCCAATTCTCTGACTTTCTTTTCACTCTCTGCCTTTGCTTTCTTCAGGGCTTCCAGCTCTTCCTCCATAGCTGTAACGTTGGCTCCTTTTTCGCCCAAACTTTTCCTCAACCTTTCAACTTCAGCATACGCCTCATCGGCTCCATCCATCGTAGATATCAAATCATGTTGTAGCCTGGCGACTTCAGTCTCAAGCTCCAGTGCCCTTGCAGCAACAGACTCTAATACCTTATTTCCCTCTTCAGCGCGTTCAACTTGTTTCTCCATTTCTTTCAGTCGTTCTTTTAGGGTCCCCTCTTCACTCTTCAATCCTTCAATCTCCGCTGACAATCTTTCAATCCTATCTTTAATTTGTTCATTCTCGTCAACCAACTTTTTCTTTTCACGCTCCAAAACTTCAATTCTCTGATTGAGCTCCGCGACCTTTGCGTCATTCTCCCGCTGGTCAACATCATAAAAATCCT

Coding sequence (CDS)

ATGATAGTTTTCTTAAAACTGGAGATTTCTGTCTCCTTCTCCTCGATTCTGTCTCTCATTTCCTCCTCCACCCTAACTTTTTTACTCTTCTCCTCTATCTCCTTGACCTCCAAAACACCAACTTTTCTCTCCAATTCTCTGACTTTCTTTTCACTCTCTGCCTTTGCTTTCTTCAGGGCTTCCAGCTCTTCCTCCATAGCTGTAACGTTGGCTCCTTTTTCGCCCAAACTTTTCCTCAACCTTTCAACTTCAGCATACGCCTCATCGGCTCCATCCATCGTAGATATCAAATCATGTTGTAGCCTGGCGACTTCAGTCTCAAGCTCCAGTGCCCTTGCAGCAACAGACTCTAATACCTTATTTCCCTCTTCAGCGCGTTCAACTTGTTTCTCCATTTCTTTCAGTCGTTCTTTTAGGGTCCCCTCTTCACTCTTCAATCCTTCAATCTCCGCTGACAATCTTTCAATCCTATCTTTAATTTGTTCATTCTCGTCAACCAACTTTTTCTTTTCACGCTCCAAAACTTCAATTCTCTGA

Protein sequence

MIVFLKLEISVSFSSILSLISSSTLTFLLFSSISLTSKTPTFLSNSLTFFSLSAFAFFRASSSSSIAVTLAPFSPKLFLNLSTSAYASSAPSIVDIKSCCSLATSVSSSSALAATDSNTLFPSSARSTCFSISFSRSFRVPSSLFNPSISADNLSILSLICSFSSTNFFFSRSKTSIL
Homology
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BLAST of Cmc11g0302471 vs. NCBI nr
Match: KAF7815730.1 (receptor-like protein EIX2 [Senna tora])

HSP 1 Score: 66.2 bits (160), Expect = 3.2e-07
Identity = 52/94 (55.32%), Postives = 61/94 (64.89%), Query Frame = 0 

Query: 5   LKLEISVSFSSILSLISSSTLTFLLFSSISLTSKTPTFLSNSLTFFSLSAFAFFRASSSS 64
           L  +IS+SFS  +SL SSSTL FLL SSIS   + P FLS SL F S SAF+ F  S+S 
Sbjct: 274 LNPQISLSFSPTISLNSSSTLIFLLLSSISFIPEIPIFLSKSLAFISFSAFSCFNPSTSL 333

Query: 65  SIAVTLAPFSPKLFLNLSTSAYASSAPSIVDIKS 99
           S ++TL  FS K  LN + SA ASSA  I DI S
Sbjct: 334 SNSITLDSFSTKTLLNSADSALASSAAPISDIAS 367

The following BLAST results are available for this feature:
BLAST of Cmc11g0302471 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF7815730.13.2e-0755.32receptor-like protein EIX2 [Senna tora][more]
BLAST of Cmc11g0302471 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc11g0302471 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc11g0302471 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0302471.1Cmc11g0302471.1mRNA