Cmc11g0302451 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0302451
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	protodermal factor 1-like
Location	CMiso1.1chr11: 23428596 .. 23430132 (-)
RNA-Seq Expression	Cmc11g0302451
Synteny	Cmc11g0302451

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAACTTCACTTTCCCTCAACCCCCCTTCTATATATTCCCCCATTTGTCCTAAACATTCCATCCATCACCATTAACATTCCTTCCCTTCTTTCCCATCTCTAATCCCTTTGCTCCCAATCAGAAAAACAGCCAACCAAAGAAACAACCATGAGAAGCAAACAAGCTTCTGCTCTCCTTTTCACTTTGCTTGCTGGGCTGCTTTCTCAAAGCCTACTCATCCCTGTATTGTCCACCTCCATTACTGATCAGAAAAGCTACTACTCTCCTCCAGACCCACATTCTGGATCTCCTCCATCAGGTTATTGCACATTCACAATGAATCTCACACATTCAGTATCAGTACAGTAGTAATGGTAGTGATTAGTAGGCTTACAGCATTATATGTTTACTTTGCATTGCAGGTTCACATGGCAGTCCTATCCCACCATCACATGGTAATGGAGGAACGCCACATTACTCCACACCAACACCTTCCACACCGTCTGGTGGCGGTGGATACTACAACCCTCCGTCTTCTGGTGGTAGCCCACCAAGCACCCCTGTAGATCCAGGCACTCCTAGCACTCCAAGCACTCCTAGTGTTCCTAGCACACCAAGCACGCCTACCATTCCCACTACTCCATTTACCTGCAAGTAAGTCAAGGGTTTATAGTAACTGTTTTCCATGGAGAAGAGAACATATTTGTTTATAAAAATGTGTTTGCTACTTTGTTTGCAGTTATTGGCTGAATCATCCAGGATTGATATGGGGAGTATTGGGATGGTGGGGAACATTAGGAAATGCCTTCGGAGCAACCAATGTCCCAGGGTTTGGAACAAATCTCAACTTGCTCCAAGCACTTTCTAACACAAGGAATGATGGGTATGGGGCCCTTCTCAGAGAAGGAACTGCTTCGTACCTCAACTCTCTTGCTAGTAACAGATTCCCCTACACAACCAAGCAAGTTAGGACAAGTTTCGTCTCAGCACTCAGCTCCAACAAAGCAGCAGGCGATCAGGCCAACACGTTCAAGTTAGCCAACGAGGGCAAAATTAAACCCAGAGCTTGATTTCCCCACTTTTTCCTACCATTTACCATCTAAATAACTAATGAGTGTGCCTTAGCAGTTAGTAGTGAGACAGTGAGACCAATTTACCATTGCATGTGTTGTTTTGTTTTATTTTGTTCTTGTTTCTAGTTTCTTGCAATCTCTTTTGTTCATGTATTTGAACATAGAGATGCTCAGTCTTTGTTATCCAAATTCATTGTGAAATCAAGATTGTTTCAAGAGTTAAATTTGTTTAATCAGATTATCCAAAAGGGGGTTGAAAATTAAAAGTTCAGATGCTTGTTATCTACACTAATCTATTGTTTCTATCACTATGCTTTAAAAGGGTAGTAAAATCCATGAAGTGTTTGTATTTATGGCGCATTAATGAGGAAATGCACTACATTCAATAAGGTTAACCTACAAAAGAACAAACAACTTGGGATGCCCTTGGGTTGGATTTAATGACCAGAGCTTGATTTTGTGAACAGTATAAATGCTAAATCT

mRNA sequence

AGTAACTTCACTTTCCCTCAACCCCCCTTCTATATATTCCCCCATTTGTCCTAAACATTCCATCCATCACCATTAACATTCCTTCCCTTCTTTCCCATCTCTAATCCCTTTGCTCCCAATCAGAAAAACAGCCAACCAAAGAAACAACCATGAGAAGCAAACAAGCTTCTGCTCTCCTTTTCACTTTGCTTGCTGGGCTGCTTTCTCAAAGCCTACTCATCCCTGTATTGTCCACCTCCATTACTGATCAGAAAAGCTACTACTCTCCTCCAGACCCACATTCTGGATCTCCTCCATCAGGTTCACATGGCAGTCCTATCCCACCATCACATGGTAATGGAGGAACGCCACATTACTCCACACCAACACCTTCCACACCGTCTGGTGGCGGTGGATACTACAACCCTCCGTCTTCTGGTGGTAGCCCACCAAGCACCCCTGTAGATCCAGGCACTCCTAGCACTCCAAGCACTCCTAGTGTTCCTAGCACACCAAGCACGCCTACCATTCCCACTACTCCATTTACCTGCAATTATTGGCTGAATCATCCAGGATTGATATGGGGAGTATTGGGATGGTGGGGAACATTAGGAAATGCCTTCGGAGCAACCAATGTCCCAGGGTTTGGAACAAATCTCAACTTGCTCCAAGCACTTTCTAACACAAGGAATGATGGGTATGGGGCCCTTCTCAGAGAAGGAACTGCTTCGTACCTCAACTCTCTTGCTAGTAACAGATTCCCCTACACAACCAAGCAAGTTAGGACAAGTTTCGTCTCAGCACTCAGCTCCAACAAAGCAGCAGGCGATCAGGCCAACACGTTCAAGTTAGCCAACGAGGGCAAAATTAAACCCAGAGCTTGATTTCCCCACTTTTTCCTACCATTTACCATCTAAATAACTAATGAGTGTGCCTTAGCAGTTAGTAGTGAGACAGTGAGACCAATTTACCATTGCATGTGTTGTTTTGTTTTATTTTGTTCTTGTTTCTAGTTTCTTGCAATCTCTTTTGTTCATGTATTTGAACATAGAGATGCTCAGTCTTTGTTATCCAAATTCATTGTGAAATCAAGATTGTTTCAAGAGTTAAATTTGTTTAATCAGATTATCCAAAAGGGGGTTGAAAATTAAAAGTTCAGATGCTTGTTATCTACACTAATCTATTGTTTCTATCACTATGCTTTAAAAGGGTAGTAAAATCCATGAAGTGTTTGTATTTATGGCGCATTAATGAGGAAATGCACTACATTCAATAAGGTTAACCTACAAAAGAACAAACAACTTGGGATGCCCTTGGGTTGGATTTAATGACCAGAGCTTGATTTTGTGAACAGTATAAATGCTAAATCT

Coding sequence (CDS)

ATGAGAAGCAAACAAGCTTCTGCTCTCCTTTTCACTTTGCTTGCTGGGCTGCTTTCTCAAAGCCTACTCATCCCTGTATTGTCCACCTCCATTACTGATCAGAAAAGCTACTACTCTCCTCCAGACCCACATTCTGGATCTCCTCCATCAGGTTCACATGGCAGTCCTATCCCACCATCACATGGTAATGGAGGAACGCCACATTACTCCACACCAACACCTTCCACACCGTCTGGTGGCGGTGGATACTACAACCCTCCGTCTTCTGGTGGTAGCCCACCAAGCACCCCTGTAGATCCAGGCACTCCTAGCACTCCAAGCACTCCTAGTGTTCCTAGCACACCAAGCACGCCTACCATTCCCACTACTCCATTTACCTGCAATTATTGGCTGAATCATCCAGGATTGATATGGGGAGTATTGGGATGGTGGGGAACATTAGGAAATGCCTTCGGAGCAACCAATGTCCCAGGGTTTGGAACAAATCTCAACTTGCTCCAAGCACTTTCTAACACAAGGAATGATGGGTATGGGGCCCTTCTCAGAGAAGGAACTGCTTCGTACCTCAACTCTCTTGCTAGTAACAGATTCCCCTACACAACCAAGCAAGTTAGGACAAGTTTCGTCTCAGCACTCAGCTCCAACAAAGCAGCAGGCGATCAGGCCAACACGTTCAAGTTAGCCAACGAGGGCAAAATTAAACCCAGAGCTTGA

Protein sequence

MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPSHGNGGTPHYSTPTPSTPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA

Homology

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BLAST of Cmc11g0302451 vs. NCBI nr
Match: XP_008456355.1 (PREDICTED: protodermal factor 1-like [Cucumis melo] >KAA0054578.1 protodermal factor 1-like [Cucumis melo var. makuwa] >TYK27542.1 protodermal factor 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 454.5 bits (1168), Expect = 5.5e-124
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS
Sbjct: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60

Query: 61  HGNGGTPHYSTPTPSTPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPSTPTI 120
           HGNGGTPHYSTPTPSTPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPSTPTI
Sbjct: 61  HGNGGTPHYSTPTPSTPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPSTPTI 120

Query: 121 PTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL 180
           PTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL
Sbjct: 121 PTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL 180

Query: 181 LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA 238
           LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA
Sbjct: 181 LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA 237

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BLAST of Cmc11g0302451 vs. NCBI nr
Match: XP_004143175.1 (protodermal factor 1 [Cucumis sativus] >KGN47037.1 hypothetical protein Csa_020699 [Cucumis sativus])

HSP 1 Score: 431.0 bits (1107), Expect = 6.5e-117
Identity = 227/241 (94.19%), Postives = 232/241 (96.27%), Query Frame = 0


Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MRSKQ SAL+FTLLAGLLSQSLLIPVLSTSI DQKSYYSPPDPHSGSPPSGSH SP+PPS
Sbjct: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60

Query: 61  HGNGGTPHYSTPTPST----PSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPS 120
           HG+GGTPHYSTPTPST    PSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP+
Sbjct: 61  HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120

Query: 121 TPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
           TPTIPT PFTC YWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG
Sbjct: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180

Query: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPR 238
           YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAG+QANTFKLANEGKIKPR
Sbjct: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGNQANTFKLANEGKIKPR 240

[Close]

BLAST of Cmc11g0302451 vs. NCBI nr
Match: XP_038900371.1 (protodermal factor 1-like [Benincasa hispida])

HSP 1 Score: 404.4 bits (1038), Expect = 6.5e-109
Identity = 219/244 (89.75%), Postives = 228/244 (93.44%), Query Frame = 0


Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPP-DPHSGSPPSGSHGSPIPP 60
           MR+KQAS LLFTLLAGLLSQSLLIPV STSI DQKSYYSPP DPHSG+PP+GSH SPIPP
Sbjct: 1   MRTKQASVLLFTLLAGLLSQSLLIPVFSTSIADQKSYYSPPSDPHSGTPPTGSHSSPIPP 60

Query: 61  SHGNGGT-PHYSTPTPST----PSGGGGYYNPPSS-GGSPPSTPVDPGTPSTPSTPSVPS 120
           SHG GG+ PHYSTPTPST    PS GGGYYNPPSS GGSPP+TPVDPGTPSTPSTP VPS
Sbjct: 61  SHGYGGSPPHYSTPTPSTPSKPPSSGGGYYNPPSSGGGSPPTTPVDPGTPSTPSTPGVPS 120

Query: 121 TPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180
           TPSTP+IPTTPFTCNYWLNHPG+IWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR
Sbjct: 121 TPSTPSIPTTPFTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180

Query: 181 NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKI 238
            DG+GALLREGTASYLNSLASNRFP+TTKQVRTSFVSALSSNKAA DQANTFKLANEGKI
Sbjct: 181 TDGFGALLREGTASYLNSLASNRFPFTTKQVRTSFVSALSSNKAAADQANTFKLANEGKI 240

[Close]

BLAST of Cmc11g0302451 vs. NCBI nr
Match: XP_022970795.1 (protodermal factor 1-like [Cucurbita maxima])

HSP 1 Score: 378.6 bits (971), Expect = 3.8e-101
Identity = 205/251 (81.67%), Postives = 221/251 (88.05%), Query Frame = 0


Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MR+KQAS LLFTLLAGLLSQSLLIPVLST+I DQKSYYSPPDPH+G+PP+GSH +PIPPS
Sbjct: 1   MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60

Query: 61  HGNGGT-PHYSTPTPST----PSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
           HG GGT PHYSTPTPST    PSG  GYYNPPSSGGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61  HGYGGTPPHYSTPTPSTPSKSPSGRSGYYNPPSSGGSTPTTPVDPGTPSTPSTPSTPSTP 120

Query: 121 STPT------------IPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNL 180
           STP+             PTTPFTCN+WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNL
Sbjct: 121 STPSTPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNL 180

Query: 181 NLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQAN 235
           NLLQALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSAL+SN+AA DQAN
Sbjct: 181 NLLQALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQAN 240

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BLAST of Cmc11g0302451 vs. NCBI nr
Match: XP_022947015.1 (protodermal factor 1-like [Cucurbita moschata])

HSP 1 Score: 377.1 bits (967), Expect = 1.1e-100
Identity = 205/248 (82.66%), Postives = 221/248 (89.11%), Query Frame = 0


Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MR+KQAS LLFTLLAGLLSQSLLIPVLST+I DQKSYYSPPDPH+G+PP+GSH +PIPPS
Sbjct: 1   MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60

Query: 61  HGNGGT-PHYSTPTPST----PSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
           HG GGT PHYSTPTPST    PSGG GYYNPP SGGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61  HGYGGTPPHYSTPTPSTPTKSPSGGSGYYNPP-SGGSTPTTPVDPGTPSTPSTPSTPSTP 120

Query: 121 STPT---------IPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLL 180
           STP+          PTTPFTCN+WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNLNLL
Sbjct: 121 STPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNLNLL 180

Query: 181 QALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFK 235
           QALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSAL+SN+AA DQAN FK
Sbjct: 181 QALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQANIFK 240

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BLAST of Cmc11g0302451 vs. ExPASy Swiss-Prot
Match: Q9S728 (Protodermal factor 1 OS=Arabidopsis thaliana OX=3702 GN=PDF1 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.1e-45
Identity = 136/300 (45.33%), Postives = 165/300 (55.00%), Query Frame = 0


Query: 7   SALLFTLLAGLLSQSLLIPVLSTSITDQKSYY-SPPD-----PHSGSPPSGSHGS----- 66
           S  ++ L A LLSQ L   V S    D K+YY SPP      P S +PPS + GS     
Sbjct: 6   SFAVWALFAALLSQQLFASVASVRFEDAKTYYLSPPSGSHGTPPSHTPPSSNCGSPPYDP 65

Query: 67  -------PIPPSHGNGGTPHYSTPTPSTPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPS- 126
                  P PPSH    +    TPTP TPS     + PP + GSPPS P  P  PSTPS 
Sbjct: 66  SPSTPSHPSPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPSHPSTPSHPSTPSH 125

Query: 127 ---------------------------------TPSVPSTPSTPTI----PTTPF----- 186
                                            TP +  +P TP I    P TPF     
Sbjct: 126 PTPSHPPSGGYYSSPPPRTPVVVTPPSPIVDPGTPIIGGSPPTPIIDPGTPGTPFIPAPF 185

Query: 187 -----TCNYWLNHPGLIWGVLGWWGTLGNAFGA----TNVPGFGTNLNLLQALSNTRNDG 237
                TC+YW NHP LIWG+LGWWGT+G AFG     +++PGF  ++NLLQALSNTR+D 
Sbjct: 186 PPITGTCDYWRNHPTLIWGLLGWWGTVGGAFGTVSIPSSIPGFDPHMNLLQALSNTRSDP 245

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BLAST of Cmc11g0302451 vs. ExPASy TrEMBL
Match: A0A5A7UHX0 (Protodermal factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00090 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 2.7e-124
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS
Sbjct: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60

Query: 61  HGNGGTPHYSTPTPSTPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPSTPTI 120
           HGNGGTPHYSTPTPSTPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPSTPTI
Sbjct: 61  HGNGGTPHYSTPTPSTPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPSTPTI 120

Query: 121 PTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL 180
           PTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL
Sbjct: 121 PTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL 180

Query: 181 LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA 238
           LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA
Sbjct: 181 LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA 237

[Close]

BLAST of Cmc11g0302451 vs. ExPASy TrEMBL
Match: A0A1S3C4A9 (protodermal factor 1-like OS=Cucumis melo OX=3656 GN=LOC103496321 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 2.7e-124
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS
Sbjct: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60

Query: 61  HGNGGTPHYSTPTPSTPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPSTPTI 120
           HGNGGTPHYSTPTPSTPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPSTPTI
Sbjct: 61  HGNGGTPHYSTPTPSTPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPSTPTI 120

Query: 121 PTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL 180
           PTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL
Sbjct: 121 PTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL 180

Query: 181 LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA 238
           LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA
Sbjct: 181 LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA 237

[Close]

BLAST of Cmc11g0302451 vs. ExPASy TrEMBL
Match: A0A0A0KF76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178950 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.2e-117
Identity = 227/241 (94.19%), Postives = 232/241 (96.27%), Query Frame = 0


Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MRSKQ SAL+FTLLAGLLSQSLLIPVLSTSI DQKSYYSPPDPHSGSPPSGSH SP+PPS
Sbjct: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60

Query: 61  HGNGGTPHYSTPTPST----PSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPS 120
           HG+GGTPHYSTPTPST    PSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP+
Sbjct: 61  HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120

Query: 121 TPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
           TPTIPT PFTC YWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG
Sbjct: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180

Query: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPR 238
           YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAG+QANTFKLANEGKIKPR
Sbjct: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGNQANTFKLANEGKIKPR 240

[Close]

BLAST of Cmc11g0302451 vs. ExPASy TrEMBL
Match: A0A6J1I3W1 (protodermal factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469672 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.9e-101
Identity = 205/251 (81.67%), Postives = 221/251 (88.05%), Query Frame = 0


Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MR+KQAS LLFTLLAGLLSQSLLIPVLST+I DQKSYYSPPDPH+G+PP+GSH +PIPPS
Sbjct: 1   MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60

Query: 61  HGNGGT-PHYSTPTPST----PSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
           HG GGT PHYSTPTPST    PSG  GYYNPPSSGGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61  HGYGGTPPHYSTPTPSTPSKSPSGRSGYYNPPSSGGSTPTTPVDPGTPSTPSTPSTPSTP 120

Query: 121 STPT------------IPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNL 180
           STP+             PTTPFTCN+WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNL
Sbjct: 121 STPSTPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNL 180

Query: 181 NLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQAN 235
           NLLQALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSAL+SN+AA DQAN
Sbjct: 181 NLLQALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQAN 240

[Close]

BLAST of Cmc11g0302451 vs. ExPASy TrEMBL
Match: A0A6J1G5M6 (protodermal factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451018 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.4e-101
Identity = 205/248 (82.66%), Postives = 221/248 (89.11%), Query Frame = 0


Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
           MR+KQAS LLFTLLAGLLSQSLLIPVLST+I DQKSYYSPPDPH+G+PP+GSH +PIPPS
Sbjct: 1   MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60

Query: 61  HGNGGT-PHYSTPTPST----PSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
           HG GGT PHYSTPTPST    PSGG GYYNPP SGGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61  HGYGGTPPHYSTPTPSTPTKSPSGGSGYYNPP-SGGSTPTTPVDPGTPSTPSTPSTPSTP 120

Query: 121 STPT---------IPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLL 180
           STP+          PTTPFTCN+WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNLNLL
Sbjct: 121 STPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNLNLL 180

Query: 181 QALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFK 235
           QALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSAL+SN+AA DQAN FK
Sbjct: 181 QALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQANIFK 240

[Close]

BLAST of Cmc11g0302451 vs. TAIR 10
Match: AT2G42840.1 (protodermal factor 1 )

HSP 1 Score: 183.3 bits (464), Expect = 2.2e-46
Identity = 136/300 (45.33%), Postives = 165/300 (55.00%), Query Frame = 0


Query: 7   SALLFTLLAGLLSQSLLIPVLSTSITDQKSYY-SPPD-----PHSGSPPSGSHGS----- 66
           S  ++ L A LLSQ L   V S    D K+YY SPP      P S +PPS + GS     
Sbjct: 6   SFAVWALFAALLSQQLFASVASVRFEDAKTYYLSPPSGSHGTPPSHTPPSSNCGSPPYDP 65

Query: 67  -------PIPPSHGNGGTPHYSTPTPSTPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPS- 126
                  P PPSH    +    TPTP TPS     + PP + GSPPS P  P  PSTPS 
Sbjct: 66  SPSTPSHPSPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPSHPSTPSHPSTPSH 125

Query: 127 ---------------------------------TPSVPSTPSTPTI----PTTPF----- 186
                                            TP +  +P TP I    P TPF     
Sbjct: 126 PTPSHPPSGGYYSSPPPRTPVVVTPPSPIVDPGTPIIGGSPPTPIIDPGTPGTPFIPAPF 185

Query: 187 -----TCNYWLNHPGLIWGVLGWWGTLGNAFGA----TNVPGFGTNLNLLQALSNTRNDG 237
                TC+YW NHP LIWG+LGWWGT+G AFG     +++PGF  ++NLLQALSNTR+D 
Sbjct: 186 PPITGTCDYWRNHPTLIWGLLGWWGTVGGAFGTVSIPSSIPGFDPHMNLLQALSNTRSDP 245

[Close]

BLAST of Cmc11g0302451 vs. TAIR 10
Match: AT2G20515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; Has 71 Blast hits to 71 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 4.2e-05
Identity = 26/71 (36.62%), Postives = 42/71 (59.15%), Query Frame = 0


Query: 161 TNLNLLQALSNTRNDG--YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAA 220
           ++L L+++ +    +G  YGALL++G A+ +NS A   F Y   +V+T  + A+ S  AA
Sbjct: 81  SDLTLVESTARNDEEGNAYGALLKQGIAALINSYARKSFSYAPWEVKTMLIQAMVSESAA 140

Query: 221 GDQANTFKLAN 230
             QA  F +AN
Sbjct: 141 RRQAEHFAVAN 151

The following BLAST results are available for this feature:

BLAST of Cmc11g0302451 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456355.1	5.5e-124	100.00	PREDICTED: protodermal factor 1-like [Cucumis melo] >KAA0054578.1 protodermal fa...	[more]
XP_004143175.1	6.5e-117	94.19	protodermal factor 1 [Cucumis sativus] >KGN47037.1 hypothetical protein Csa_0206...	[more]
XP_038900371.1	6.5e-109	89.75	protodermal factor 1-like [Benincasa hispida]	[more]
XP_022970795.1	3.8e-101	81.67	protodermal factor 1-like [Cucurbita maxima]	[more]
XP_022947015.1	1.1e-100	82.66	protodermal factor 1-like [Cucurbita moschata]	[more]

BLAST of Cmc11g0302451 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S728	3.1e-45	45.33	Protodermal factor 1 OS=Arabidopsis thaliana OX=3702 GN=PDF1 PE=2 SV=1	[more]

BLAST of Cmc11g0302451 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHX0	2.7e-124	100.00	Protodermal factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C4A9	2.7e-124	100.00	protodermal factor 1-like OS=Cucumis melo OX=3656 GN=LOC103496321 PE=4 SV=1	[more]
A0A0A0KF76	3.2e-117	94.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178950 PE=4 SV=1	[more]
A0A6J1I3W1	1.9e-101	81.67	protodermal factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469672 PE=4 SV=1	[more]
A0A6J1G5M6	5.4e-101	82.66	protodermal factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451018 PE=4 SV=...	[more]

BLAST of Cmc11g0302451 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42840.1	2.2e-46	45.33	protodermal factor 1	[more]
AT2G20515.1	4.2e-05	36.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..119
None	No IPR available	PANTHER	PTHR33210:SF18	PROTODERMAL FACTOR 1	coord: 1..237
IPR039923	Protodermal factor 1	PANTHER	PTHR33210	PROTODERMAL FACTOR 1	coord: 1..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0302451.1	Cmc11g0302451.1	mRNA