Cmc11g0302231 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0302231
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr11: 23046480 .. 23049152 (+)
RNA-Seq Expression	Cmc11g0302231
Synteny	Cmc11g0302231

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTCTGCTCATTTCCTTCTTCAAACGCAAAAACCATTTTCCCTTCTTTGAACGCCGCTGAAAGTCTCTGTCCCCGTCTCTTCTTCTTTCGTTCTTTTCTTCCCGATTCTTCTTTCTGGTATGCGTTTTCTCTATTTCTCTCTGTTTTTAAACTTCCTTTTCCCATTTGATTCTCGTAAATACGACTTCTTACGATGATCAATTTTGCATGCTCTTTGATTTCGAGCTTATTCATTCGTGGAATTGAATTGCTAGCTCTTTTCTATGTTTTGGTTATCTCGAGCATGTTAACCGGTGAAACTTTTAGTGTTTAGAGTTTAGTGTCGTGTCTGATTGGTGAGTTAAGTGTGGAAGAAACTAGAGTTTTCTTTTTTGATTTCTTCGTGATTGATGAGGACTGGGGGATTTTAAGATAAAGAAAATTTCTACTTGCGAGTTAAGCATTCAAAATGAAACCATTGGGTAAGATGTGTCAAATCCTGAATTATAATTTTCGTTGAGTATTATTTGATAAAATGTAGAAGCCTTTCGTATTAGATATATATTTTTTTTTTTGGTATATAAAATGTTGGAAAGGATTTGTAGAGACCACAAGCATATGCAATCATTGGTATTCTAATCCTCCATGGATCAAAATTTTGCTGTCTTTTTCCATGCACCTGAATTTTTTTTGCAATTTTTAAGAGCACGCCAGAAGAAATGTAGTTTATCACCTCTGTTCTGAAGGTATGGTTTTTTCTGTTATCTTTGTTTGTGTTTATAGGAGATTGGGATGATTTTGGATTTTATTAAGTGGGGTTTCATTTATTTTTTGGTTGATGATTATAGTTCAGTTTTATTGACTCATTATGGAAAGACTGTTGAGAAAGAAGACTTTGAATAAGTTGCAAAATTAAAACTGTTTGTGTTATAGTTTCAACTTGAGGTGGCTAGCAAGGAAAAAATGACATCTTTGTTTTGAATTTTTAAATTTATTGCTATTATTAGTTTATTTTTAGGTTTATTCTTGATGATCAAAAAACCCGAGTCTCTAGTGCATAATACTTTTGTGAAAAATATGGTATGGCACTCAAATTTTCATCTCTACCGGCTATACGAGCTCGTAATTATACAAAGCCCATTTATTTGCCTATGGAGGTATGTTCTTGTTCTCATAGGATATATTGAGATATATTATGAACTAATAATTTGGTGAAATAGATTCGATTTATCTCTCCTTTTAACTAGGGTTGAAATTGGTACCTTGTGTTGTAATTACAAAGGGTAAAACATTTCTTATATTCTTATATTGATGTGTAGAGCCATACTCTAAAATTTTATTTTGTTTTCTTACTAGGTTTTGCAAGAATCCATTAGAGCAGTAAAGTCATATTGGAGCAATTGATTGATTTATAGGTCTTTTTGTAGGTTTGGTAGCAAAATTTTGGTTGAAAGCTACTTATTTAAATAGCTTGTTGGCACCAAAACATGTATGTTTATTCTATCATTGGACAAACCCTTTACCAACAATTGTACAAATATTACAAAGTGTATGTTAGCGTATATATATTAAAGCGTTGACAGTTTGTTTTCATATAGGTGTGTTGTATATATATTAAAGTGTTGACAGTTTGTTTCCATATAGGTGTGTTGTATAGTACTTTGTGCTTGAATTGGTCGGTTAATGGCAGGGCGGCAAGAAAAACATGGACCGAAAAAAAAAAATAGGGCAAGAAAAATAGGAACTGAATTTTTTTTTTTGACATTTGAATTTGAAAAAAAAAACTATCATAGAAAATGTATTTTTAACAGTGAATTAAAGTCATGGTAGGTGAAATGATGATAGTTAATCATTATTATAAAATATAAATAATGACATTTATTATATATCATAAAATATGAATAATGATAGTTATTATCTGTCATCAAATATGAATAATGATAGTTATTATCTGTCATCAAATATGAATAATGATAGTTATTATCTGTCATCAAATATAAATAATGATAGTTATTATCTGTCATCAAATATAAATAATGATAGTTATTATCTGTCATCAAATATAAATAATGATAGTTATTATTTGTTATCAATAATCGATTTGTGACATTTATTTTCTATCATGAAAAACATTTATCGTGGCAGTTTTTCAAATTGTCATAATATACTTTCCATGACTATTGGAACAATGACGGCAAATAACTGCCACGAAATTTAACTATGATAGTGTTTAAGTGCCATTGTTGGCCCTTTTTCTAGTAGAATTAGCAAGAAGTATCTTTGTGCATTTGATGTGTTGTTGTATCTCCGACGGTAGACTGTGGGCTGTGCATTTGATGTGTTGTTGTATCACAAGCTATAGATTGTGGATTGCATAGAGCGTGGAAATCACAAGAGGTTGGGAGAGACTAACAAACTAATAAAATCAGGAGGCAAGAAGATCACACTCAGGGAGTCCGTCCTGTGTGATGCAGAGTACAACCAAGGTATATGTTGCATCGAACTGGGTTAGCAACGTGACTTCGTTATTTTCTTCTATGCTTATTTGTTACTCGTGTTATTTACGCAGTTATTAGCATTAGCAATGACCACGTTCCCTGATTAAGCATGTACTTATTTTTTCAAAAGATGTTACTACCTTGAAAAAAGAATTGGTGCGACTTTGGTGTTAAATCTCGGATGTTTTTACAACTT

mRNA sequence

GGTCTGCTCATTTCCTTCTTCAAACGCAAAAACCATTTTCCCTTCTTTGAACGCCGCTGAAAGTCTCTGTCCCCGTCTCTTCTTCTTTCGTTCTTTTCTTCCCGATTCTTCTTTCTGGTTTTGCAAGAATCCATTAGAGCAGTAAAGTCATATTGGAGCAATTGATTGATTTATAGGTCTTTTTGTAGGTTTGGTAGCAAAATTTTGGTTGAAAGCTACTTATTTAAATAGCTTGTTGGCACCAAAACATGTATGTTTATTCTATCATTGGACAAACCCTTTACCAACAATTGTACAAATATTACAAAGTGTATGTTAGCGTATATATATTAAAGCGTTGACAGTTTGTTTTCATATAGGTGTGTTGTATATATATTAAAGTGTTGACAGTTTGTTTCCATATAGGTGTGTTGTATAGTACTTTGTGCTTGAATTGGTCGGTTAATGGCAGGGCGGCAAGAAAAACATGGACCGAAAAAAAAAAATAGGGCAAGAAAAATAGGAACTGAATTTTTTTTTTTGACATTTGAATTTGAAAAAAAAAACTATCATAGAAAATGTATTTTTAACAGTGAATTAAAGTCATGGTAGGTGAAATGATGATAGTTAATCATTATTATAAAATATAAATAATGACATTTATTATATATCATAAAATATGAATAATGATAGTTATTATCTGTCATCAAATATGAATAATGATAGTTATTATCTGTCATCAAATATGAATAATGATAGTTATTATCTGTCATCAAATATAAATAATGATAGTTATTATCTGTCATCAAATATAAATAATGATAGTTATTATCTGTCATCAAATATAAATAATGATAGTTATTATTTGTTATCAATAATCGATTTGTGACATTTATTTTCTATCATGAAAAACATTTATCGTGGCAGTTTTTCAAATTGTCATAATATACTTTCCATGACTATTGGAACAATGACGGCAAATAACTGCCACGAAATTTAACTATGATAGTGTTTAAGTGCCATTGTTGGCCCTTTTTCTAGTAGAATTAGCAAGAAGTATCTTTGTGCATTTGATGTGTTGTTGTATCTCCGACGGTAGACTGTGGGCTGTGCATTTGATGTGTTGTTGTATCACAAGCTATAGATTGTGGATTGCATAGAGCGTGGAAATCACAAGAGGTTGGGAGAGACTAACAAACTAATAAAATCAGGAGGCAAGAAGATCACACTCAGGGAGTCCGTCCTGTGTGATGCAGAGTACAACCAAGGTATATGTTGCATCGAACTGGGTTAGCAACGTGACTTCGTTATTTTCTTCTATGCTTATTTGTTACTCGTGTTATTTACGCAGTTATTAGCATTAGCAATGACCACGTTCCCTGATTAAGCATGTACTTATTTTTTCAAAAGATGTTACTACCTTGAAAAAAGAATTGGTGCGACTTTGGTGTTAAATCTCGGATGTTTTTACAACTT

Coding sequence (CDS)

ATGAATAATGATAGTTATTATCTGTCATCAAATATGAATAATGATAGTTATTATCTGTCATCAAATATGAATAATGATAGTTATTATCTGTCATCAAATATAAATAATGATAGTTATTATCTGTCATCAAATATAAATAATGATAGTTATTATCTGTCATCAAATATAAATAATGATAGTTATTATTTGTTATCAATAATCGATTTGTGA

Protein sequence

MNNDSYYLSSNMNNDSYYLSSNMNNDSYYLSSNINNDSYYLSSNINNDSYYLSSNINNDSYYLLSIIDL

Homology

[Close]

BLAST of Cmc11g0302231 vs. NCBI nr
Match: XP_028545012.1 (hypothetical protein PGO_124210 [Plasmodium gonderi] >GAW82423.1 hypothetical protein PGO_124210 [Plasmodium gonderi])

HSP 1 Score: 54.3 bits (129), Expect = 4.8e-04
Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 2   NNDSYYLSSNMNNDSYYLSSNMNNDSYYLSSNINNDSYYLSSNINNDSYYLSSNINNDSY 61
           NND + L SN NND + L SN NND + L SN NND + L SN NND + L SN NND +
Sbjct: 96  NNDEHVLISNKNNDEHVLISNKNNDEHVLVSNKNNDEHVLISNKNNDEHVLISNKNNDEH 155

Query: 62  YLLS 66
            L+S
Sbjct: 156 VLVS 159

[Close]

BLAST of Cmc11g0302231 vs. ExPASy TrEMBL
Match: A0A1Y1JPS2 (Uncharacterized protein OS=Plasmodium gonderi OX=77519 GN=PGO_124210 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.3e-04
Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 2   NNDSYYLSSNMNNDSYYLSSNMNNDSYYLSSNINNDSYYLSSNINNDSYYLSSNINNDSY 61
           NND + L SN NND + L SN NND + L SN NND + L SN NND + L SN NND +
Sbjct: 96  NNDEHVLISNKNNDEHVLISNKNNDEHVLVSNKNNDEHVLISNKNNDEHVLISNKNNDEH 155

Query: 62  YLLS 66
            L+S
Sbjct: 156 VLVS 159

The following BLAST results are available for this feature:

BLAST of Cmc11g0302231 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_028545012.1	4.8e-04	54.69	hypothetical protein PGO_124210 [Plasmodium gonderi] >GAW82423.1 hypothetical pr...	[more]

BLAST of Cmc11g0302231 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0302231 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1Y1JPS2	2.3e-04	54.69	Uncharacterized protein OS=Plasmodium gonderi OX=77519 GN=PGO_124210 PE=4 SV=1	[more]

BLAST of Cmc11g0302231 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0302231.1	Cmc11g0302231.1	mRNA