Homology
BLAST of Cmc11g0302161 vs. NCBI nr
Match:
TYK06518.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 341.3 bits (874), Expect = 5.1e-90
Identity = 165/177 (93.22%), Postives = 170/177 (96.05%), Query Frame = 0
Query: 1 MFGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIKKNKTSL 60
M GADCILICLYVDDMLIFGTNMELITDTK+FLSSHFEMKDLGEADVILGVKI+KNKTSL
Sbjct: 1019 MVGADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSL 1078
Query: 61 SLCQSHYVEKILKKFDSFDVSPMRTPFGASKHLKKNKEDSVSQPEYAKIIGSVLYLMNYT 120
SLCQSHYVEKILKKFDSFDVSP+RTPF ASKHLKKNK DSVSQPEYAKIIGSV+YLMNYT
Sbjct: 1079 SLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYT 1138
Query: 121 RLDIAYAVSRLSRYTHNPDRYHWDTLRHLLRYLKGTIDYCLHFNKFSAVLEGYCDAN 178
R DIAYAVSRLSRYTHNP+RYHWD LRHLLRYLKGTIDYCLHF KF AVLEGYCDAN
Sbjct: 1139 RPDIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDAN 1195
BLAST of Cmc11g0302161 vs. NCBI nr
Match:
KAA0049695.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK12177.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76
Identity = 143/155 (92.26%), Postives = 148/155 (95.48%), Query Frame = 0
Query: 23 MELITDTKFFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYVEKILKKFDSFDVSP 82
MEL+TDTKFFLSSHFEMKDLGEADVILGVKI+KNKTSLSLCQSHYVEKILKKFD FDVSP
Sbjct: 1 MELMTDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDFFDVSP 60
Query: 83 MRTPFGASKHLKKNKEDSVSQPEYAKIIGSVLYLMNYTRLDIAYAVSRLSRYTHNPDRYH 142
+RTPF ASKHL KNK DSVSQPEYAKIIGSV+YLMNYTR DIAYAVSRLSRYTHNPDRYH
Sbjct: 61 VRTPFDASKHLMKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRYH 120
Query: 143 WDTLRHLLRYLKGTIDYCLHFNKFSAVLEGYCDAN 178
WD LRHLLRYLKGTIDYCL+FNKF AVLEGYCDAN
Sbjct: 121 WDVLRHLLRYLKGTIDYCLYFNKFPAVLEGYCDAN 155
BLAST of Cmc11g0302161 vs. NCBI nr
Match:
KAA0038918.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 276.2 bits (705), Expect = 2.0e-70
Identity = 132/139 (94.96%), Postives = 136/139 (97.84%), Query Frame = 0
Query: 39 MKDLGEADVILGVKIKKNKTSLSLCQSHYVEKILKKFDSFDVSPMRTPFGASKHLKKNKE 98
MKDLGEADVILGVKI+KNKTSLSLCQSHYVEKILKKFDSFDVSP+RTPF ASKHLKKNKE
Sbjct: 1 MKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKE 60
Query: 99 DSVSQPEYAKIIGSVLYLMNYTRLDIAYAVSRLSRYTHNPDRYHWDTLRHLLRYLKGTID 158
DSVSQPEYAKIIGSV+YLMNYTR DIAYAVSRLSRYTHNPDRYHWD LRHLLRYLKGTID
Sbjct: 61 DSVSQPEYAKIIGSVMYLMNYTRSDIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTID 120
Query: 159 YCLHFNKFSAVLEGYCDAN 178
YCLHF+KFSAVLEGYCDAN
Sbjct: 121 YCLHFDKFSAVLEGYCDAN 139
BLAST of Cmc11g0302161 vs. NCBI nr
Match:
TYK04656.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 273.1 bits (697), Expect = 1.7e-69
Identity = 131/139 (94.24%), Postives = 135/139 (97.12%), Query Frame = 0
Query: 39 MKDLGEADVILGVKIKKNKTSLSLCQSHYVEKILKKFDSFDVSPMRTPFGASKHLKKNKE 98
M+DLGEADVILGVKI+KNKTSLSLCQSHYVEKILKKFDSFDVSP+RTPF ASKHLKKNK
Sbjct: 1 MEDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKG 60
Query: 99 DSVSQPEYAKIIGSVLYLMNYTRLDIAYAVSRLSRYTHNPDRYHWDTLRHLLRYLKGTID 158
DSVSQPEYAKIIGSV+YLMNYTRLDIAYAVSRLSRYT NPDRYHWD LRHLLRYLKGTID
Sbjct: 61 DSVSQPEYAKIIGSVMYLMNYTRLDIAYAVSRLSRYTQNPDRYHWDALRHLLRYLKGTID 120
Query: 159 YCLHFNKFSAVLEGYCDAN 178
YCLHFNKFSAVLEGYCDAN
Sbjct: 121 YCLHFNKFSAVLEGYCDAN 139
BLAST of Cmc11g0302161 vs. NCBI nr
Match:
KAA0045258.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa] >TYK19282.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 270.8 bits (691), Expect = 8.4e-69
Identity = 131/154 (85.06%), Postives = 139/154 (90.26%), Query Frame = 0
Query: 33 LSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYVEKILKKFDSFDVSPMR-------- 92
+ SHFEMKDLGEAD+ILGVKI+KNK+S+SLCQSHYVEKILKKFDSFDVSP+R
Sbjct: 730 IRSHFEMKDLGEADIILGVKIRKNKSSMSLCQSHYVEKILKKFDSFDVSPVRTPFDASKH 789
Query: 93 -TPFGASKHLKKNKEDSVSQPEYAKIIGSVLYLMNYTRLDIAYAVSRLSRYTHNPDRYHW 152
TPF ASKHLKKNK DSVSQP+YAKIIGSV+YLMNYTRLDIAYAVSRLSRYTHNPDRYHW
Sbjct: 790 LTPFDASKHLKKNKGDSVSQPKYAKIIGSVMYLMNYTRLDIAYAVSRLSRYTHNPDRYHW 849
Query: 153 DTLRHLLRYLKGTIDYCLHFNKFSAVLEGYCDAN 178
D LRHLLRYLKG IDYCLHFNKF AVLEGYCDAN
Sbjct: 850 DALRHLLRYLKGMIDYCLHFNKFPAVLEGYCDAN 883
BLAST of Cmc11g0302161 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 1.2e-30
Identity = 73/180 (40.56%), Postives = 110/180 (61.11%), Query Frame = 0
Query: 7 ILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIKKNKTS--LSLCQ 66
I++ LYVDDMLI G + LI K LS F+MKDLG A ILG+KI + +TS L L Q
Sbjct: 1003 IILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQ 1062
Query: 67 SHYVEKILKKFDSFDVSPMRTPFGASKHLKK-------NKEDSVSQPEYAKIIGSVLYLM 126
Y+E++L++F+ + P+ TP L K ++ ++++ Y+ +GS++Y M
Sbjct: 1063 EKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAM 1122
Query: 127 NYTRLDIAYAVSRLSRYTHNPDRYHWDTLRHLLRYLKGTIDYCLHFNKFSAVLEGYCDAN 178
TR DIA+AV +SR+ NP + HW+ ++ +LRYL+GT CL F +L+GY DA+
Sbjct: 1123 VCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDAD 1182
BLAST of Cmc11g0302161 vs. ExPASy Swiss-Prot
Match:
P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)
HSP 1 Score: 105.9 bits (263), Expect = 4.7e-22
Identity = 61/170 (35.88%), Postives = 97/170 (57.06%), Query Frame = 0
Query: 9 ICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYV 68
+ LYVDD+L+ G++ L+ F LSS F MKDLG LG++IK + + L L Q+ Y
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 69 EKILKKFDSFDVSPMRTPFGASKHLKKNKEDSVSQPEYAKIIGSVLYLMNYTRLDIAYAV 128
E+IL D PM TP + + ++ I+G++ YL TR DI+YAV
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYL-TLTRPDISYAV 122
Query: 129 SRLSRYTHNPDRYHWDTLRHLLRYLKGTIDYCLHFNKFSAV-LEGYCDAN 178
+ + + H P +D L+ +LRY+KGTI + L+ +K S + ++ +CD++
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 171
BLAST of Cmc11g0302161 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 105.9 bits (263), Expect = 4.7e-22
Identity = 63/177 (35.59%), Postives = 95/177 (53.67%), Query Frame = 0
Query: 3 GADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIKKNKTSLSL 62
G I + +YVDD+LI G + L+ T LS F +K+ + LG++ K+ L L
Sbjct: 1124 GRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHL 1183
Query: 63 CQSHYVEKILKKFDSFDVSPMRTPFGASKHLKKNKEDSVSQP-EYAKIIGSVLYLMNYTR 122
Q Y +L + + P+ TP S L + + P EY I+GS+ YL +TR
Sbjct: 1184 SQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLA-FTR 1243
Query: 123 LDIAYAVSRLSRYTHNPDRYHWDTLRHLLRYLKGTIDYCLHFNKFSAV-LEGYCDAN 178
D++YAV+RLS+Y H P HW+ L+ +LRYL GT D+ + K + + L Y DA+
Sbjct: 1244 PDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDAD 1299
BLAST of Cmc11g0302161 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 104.8 bits (260), Expect = 1.1e-21
Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 0
Query: 3 GADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIKKNKTSLSL 62
G + + +YVDD+LI G + L+ +T LS F +KD E LG++ K+ T L L
Sbjct: 1141 GKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHL 1200
Query: 63 CQSHYVEKILKKFDSFDVSPMRTPFGASKHLKKNKEDSVSQP-EYAKIIGSVLYLMNYTR 122
Q Y+ +L + + P+ TP S L ++ P EY I+GS+ YL +TR
Sbjct: 1201 SQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLA-FTR 1260
Query: 123 LDIAYAVSRLSRYTHNPDRYHWDTLRHLLRYLKGTIDYCLHFNKFSAV-LEGYCDAN 178
DI+YAV+RLS++ H P H L+ +LRYL GT ++ + K + + L Y DA+
Sbjct: 1261 PDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDAD 1316
BLAST of Cmc11g0302161 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 102.4 bits (254), Expect = 5.2e-21
Identity = 61/174 (35.06%), Postives = 95/174 (54.60%), Query Frame = 0
Query: 7 ILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSH 66
I + LYVDD++I +M + + K +L F M DL E +G++I+ + + L QS
Sbjct: 1082 IYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSA 1141
Query: 67 YVEKILKKFDSFDVSPMRTPFGASKHLKKNKEDSVSQPEYAKIIGSVLYLMNYTRLDIAY 126
YV+KIL KF+ + + + TP + + + D +IG ++Y+M TR D+
Sbjct: 1142 YVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTT 1201
Query: 127 AVSRLSRYTHNPDRYHWDTLRHLLRYLKGTIDYCLHFNK---FSAVLEGYCDAN 178
AV+ LSRY+ + W L+ +LRYLKGTID L F K F + GY D++
Sbjct: 1202 AVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSD 1255
BLAST of Cmc11g0302161 vs. ExPASy TrEMBL
Match:
A0A5D3C5T2 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00500 PE=4 SV=1)
HSP 1 Score: 341.3 bits (874), Expect = 2.5e-90
Identity = 165/177 (93.22%), Postives = 170/177 (96.05%), Query Frame = 0
Query: 1 MFGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIKKNKTSL 60
M GADCILICLYVDDMLIFGTNMELITDTK+FLSSHFEMKDLGEADVILGVKI+KNKTSL
Sbjct: 1019 MVGADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSL 1078
Query: 61 SLCQSHYVEKILKKFDSFDVSPMRTPFGASKHLKKNKEDSVSQPEYAKIIGSVLYLMNYT 120
SLCQSHYVEKILKKFDSFDVSP+RTPF ASKHLKKNK DSVSQPEYAKIIGSV+YLMNYT
Sbjct: 1079 SLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYT 1138
Query: 121 RLDIAYAVSRLSRYTHNPDRYHWDTLRHLLRYLKGTIDYCLHFNKFSAVLEGYCDAN 178
R DIAYAVSRLSRYTHNP+RYHWD LRHLLRYLKGTIDYCLHF KF AVLEGYCDAN
Sbjct: 1139 RPDIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDAN 1195
BLAST of Cmc11g0302161 vs. ExPASy TrEMBL
Match:
A0A5A7U7W6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001180 PE=4 SV=1)
HSP 1 Score: 296.6 bits (758), Expect = 7.0e-77
Identity = 143/155 (92.26%), Postives = 148/155 (95.48%), Query Frame = 0
Query: 23 MELITDTKFFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYVEKILKKFDSFDVSP 82
MEL+TDTKFFLSSHFEMKDLGEADVILGVKI+KNKTSLSLCQSHYVEKILKKFD FDVSP
Sbjct: 1 MELMTDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDFFDVSP 60
Query: 83 MRTPFGASKHLKKNKEDSVSQPEYAKIIGSVLYLMNYTRLDIAYAVSRLSRYTHNPDRYH 142
+RTPF ASKHL KNK DSVSQPEYAKIIGSV+YLMNYTR DIAYAVSRLSRYTHNPDRYH
Sbjct: 61 VRTPFDASKHLMKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRYH 120
Query: 143 WDTLRHLLRYLKGTIDYCLHFNKFSAVLEGYCDAN 178
WD LRHLLRYLKGTIDYCL+FNKF AVLEGYCDAN
Sbjct: 121 WDVLRHLLRYLKGTIDYCLYFNKFPAVLEGYCDAN 155
BLAST of Cmc11g0302161 vs. ExPASy TrEMBL
Match:
A0A5A7T7R7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1170G00880 PE=4 SV=1)
HSP 1 Score: 276.2 bits (705), Expect = 9.7e-71
Identity = 132/139 (94.96%), Postives = 136/139 (97.84%), Query Frame = 0
Query: 39 MKDLGEADVILGVKIKKNKTSLSLCQSHYVEKILKKFDSFDVSPMRTPFGASKHLKKNKE 98
MKDLGEADVILGVKI+KNKTSLSLCQSHYVEKILKKFDSFDVSP+RTPF ASKHLKKNKE
Sbjct: 1 MKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKE 60
Query: 99 DSVSQPEYAKIIGSVLYLMNYTRLDIAYAVSRLSRYTHNPDRYHWDTLRHLLRYLKGTID 158
DSVSQPEYAKIIGSV+YLMNYTR DIAYAVSRLSRYTHNPDRYHWD LRHLLRYLKGTID
Sbjct: 61 DSVSQPEYAKIIGSVMYLMNYTRSDIAYAVSRLSRYTHNPDRYHWDALRHLLRYLKGTID 120
Query: 159 YCLHFNKFSAVLEGYCDAN 178
YCLHF+KFSAVLEGYCDAN
Sbjct: 121 YCLHFDKFSAVLEGYCDAN 139
BLAST of Cmc11g0302161 vs. ExPASy TrEMBL
Match:
A0A5D3C2K6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1133G00090 PE=4 SV=1)
HSP 1 Score: 273.1 bits (697), Expect = 8.2e-70
Identity = 131/139 (94.24%), Postives = 135/139 (97.12%), Query Frame = 0
Query: 39 MKDLGEADVILGVKIKKNKTSLSLCQSHYVEKILKKFDSFDVSPMRTPFGASKHLKKNKE 98
M+DLGEADVILGVKI+KNKTSLSLCQSHYVEKILKKFDSFDVSP+RTPF ASKHLKKNK
Sbjct: 1 MEDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKG 60
Query: 99 DSVSQPEYAKIIGSVLYLMNYTRLDIAYAVSRLSRYTHNPDRYHWDTLRHLLRYLKGTID 158
DSVSQPEYAKIIGSV+YLMNYTRLDIAYAVSRLSRYT NPDRYHWD LRHLLRYLKGTID
Sbjct: 61 DSVSQPEYAKIIGSVMYLMNYTRLDIAYAVSRLSRYTQNPDRYHWDALRHLLRYLKGTID 120
Query: 159 YCLHFNKFSAVLEGYCDAN 178
YCLHFNKFSAVLEGYCDAN
Sbjct: 121 YCLHFNKFSAVLEGYCDAN 139
BLAST of Cmc11g0302161 vs. ExPASy TrEMBL
Match:
A0A5A7TQW7 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00950 PE=4 SV=1)
HSP 1 Score: 270.8 bits (691), Expect = 4.1e-69
Identity = 131/154 (85.06%), Postives = 139/154 (90.26%), Query Frame = 0
Query: 33 LSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYVEKILKKFDSFDVSPMR-------- 92
+ SHFEMKDLGEAD+ILGVKI+KNK+S+SLCQSHYVEKILKKFDSFDVSP+R
Sbjct: 730 IRSHFEMKDLGEADIILGVKIRKNKSSMSLCQSHYVEKILKKFDSFDVSPVRTPFDASKH 789
Query: 93 -TPFGASKHLKKNKEDSVSQPEYAKIIGSVLYLMNYTRLDIAYAVSRLSRYTHNPDRYHW 152
TPF ASKHLKKNK DSVSQP+YAKIIGSV+YLMNYTRLDIAYAVSRLSRYTHNPDRYHW
Sbjct: 790 LTPFDASKHLKKNKGDSVSQPKYAKIIGSVMYLMNYTRLDIAYAVSRLSRYTHNPDRYHW 849
Query: 153 DTLRHLLRYLKGTIDYCLHFNKFSAVLEGYCDAN 178
D LRHLLRYLKG IDYCLHFNKF AVLEGYCDAN
Sbjct: 850 DALRHLLRYLKGMIDYCLHFNKFPAVLEGYCDAN 883
BLAST of Cmc11g0302161 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 105.9 bits (263), Expect = 3.3e-23
Identity = 61/170 (35.88%), Postives = 97/170 (57.06%), Query Frame = 0
Query: 9 ICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYV 68
+ LYVDD+L+ G++ L+ F LSS F MKDLG LG++IK + + L L Q+ Y
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 69 EKILKKFDSFDVSPMRTPFGASKHLKKNKEDSVSQPEYAKIIGSVLYLMNYTRLDIAYAV 128
E+IL D PM TP + + ++ I+G++ YL TR DI+YAV
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYL-TLTRPDISYAV 122
Query: 129 SRLSRYTHNPDRYHWDTLRHLLRYLKGTIDYCLHFNKFSAV-LEGYCDAN 178
+ + + H P +D L+ +LRY+KGTI + L+ +K S + ++ +CD++
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 171
BLAST of Cmc11g0302161 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 87.0 bits (214), Expect = 1.6e-17
Identity = 52/174 (29.89%), Postives = 93/174 (53.45%), Query Frame = 0
Query: 6 CILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQS 65
C+L+ YVDD++I N + + K L S F+++DLG LG++I ++ +++CQ
Sbjct: 279 CVLV--YVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQR 338
Query: 66 HYVEKILKKFDSFDVSPMRTPFGASKHLKKNK-EDSVSQPEYAKIIGSVLYLMNYTRLDI 125
Y +L + P P S + D V Y ++IG ++YL TRLDI
Sbjct: 339 KYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYL-QITRLDI 398
Query: 126 AYAVSRLSRYTHNPDRYHWDTLRHLLRYLKGTIDYCLHFNKFSAV-LEGYCDAN 178
++AV++LS+++ P H + +L Y+KGT+ L ++ + + L+ + DA+
Sbjct: 399 SFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK06518.1 | 5.1e-90 | 93.22 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0049695.1 | 1.4e-76 | 92.26 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KAA0038918.1 | 2.0e-70 | 94.96 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK04656.1 | 1.7e-69 | 94.24 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KAA0045258.1 | 8.4e-69 | 85.06 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] >TYK19282.1 ty1-cop... | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 1.2e-30 | 40.56 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P92519 | 4.7e-22 | 35.88 | Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Q9ZT94 | 4.7e-22 | 35.59 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 1.1e-21 | 35.59 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
P04146 | 5.2e-21 | 35.06 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3C5T2 | 2.5e-90 | 93.22 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7U7W6 | 7.0e-77 | 92.26 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7T7R7 | 9.7e-71 | 94.96 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3C2K6 | 8.2e-70 | 94.24 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7TQW7 | 4.1e-69 | 85.06 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
Match Name | E-value | Identity | Description | |
ATMG00810.1 | 3.3e-23 | 35.88 | DNA/RNA polymerases superfamily protein | [more] |
AT4G23160.1 | 1.6e-17 | 29.89 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |