
Cmc11g0302131 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGACGTATTCCCTATGCCCCAGCTGTGGGCAACTTAATGTATGCTATGCTCTACACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTTGGTATCAGTCCAACCCAGGGTTAGACCACTGGACGACGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATTCTTACAGGATACACTAACTCTGATTTCCAAACCGATAAAGATTCTAGAAAATCTACGTCGGGATCAGTGTTCACCCTAAATGGAGGAGCTGTAGTATGA ATGAGACGTATTCCCTATGCCCCAGCTGTGGGCAACTTAATGTATGCTATGCTCTACACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTTGGTATCAGTCCAACCCAGGGTTAGACCACTGGACGACGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATTCTTACAGGATACACTAACTCTGATTTCCAAACCGATAAAGATTCTAGAAAATCTACGTCGGGATCAGTGTTCACCCTAAATGGAGGAGCTGTAGTATGA ATGAGACGTATTCCCTATGCCCCAGCTGTGGGCAACTTAATGTATGCTATGCTCTACACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTTGGTATCAGTCCAACCCAGGGTTAGACCACTGGACGACGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATTCTTACAGGATACACTAACTCTGATTTCCAAACCGATAAAGATTCTAGAAAATCTACGTCGGGATCAGTGTTCACCCTAAATGGAGGAGCTGTAGTATGA MRRIPYAPAVGNLMYAMLYTRPDICYAVGIVSWYQSNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSGSVFTLNGGAVV Homology
BLAST of Cmc11g0302131 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 191.8 bits (486), Expect = 2.8e-45 Identity = 94/101 (93.07%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Cmc11g0302131 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 191.8 bits (486), Expect = 2.8e-45 Identity = 94/101 (93.07%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Cmc11g0302131 vs. NCBI nr
Match: KAA0062886.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 191.0 bits (484), Expect = 4.8e-45 Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Cmc11g0302131 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 191.0 bits (484), Expect = 4.8e-45 Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0
BLAST of Cmc11g0302131 vs. NCBI nr
Match: KAA0061170.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 191.0 bits (484), Expect = 4.8e-45 Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Cmc11g0302131 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 7.6e-25 Identity = 54/100 (54.00%), Postives = 73/100 (73.00%), Query Frame = 0
BLAST of Cmc11g0302131 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 3.1e-18 Identity = 46/101 (45.54%), Postives = 68/101 (67.33%), Query Frame = 0
BLAST of Cmc11g0302131 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 64.3 bits (155), Expect = 9.0e-10 Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 0
BLAST of Cmc11g0302131 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08 Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 0
BLAST of Cmc11g0302131 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06 Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 0
BLAST of Cmc11g0302131 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.4e-45 Identity = 94/101 (93.07%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Cmc11g0302131 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.4e-45 Identity = 94/101 (93.07%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Cmc11g0302131 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 2.3e-45 Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0
BLAST of Cmc11g0302131 vs. ExPASy TrEMBL
Match: A0A5A7V8W0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4427G00180 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 2.3e-45 Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Cmc11g0302131 vs. ExPASy TrEMBL
Match: A0A5A7V1F5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00440 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 2.3e-45 Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Cmc11g0302131 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein ) HSP 1 Score: 42.7 bits (99), Expect = 2.0e-04 Identity = 28/82 (34.15%), Postives = 45/82 (54.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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