Cmc11g0301781 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0301781
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
LocationCMiso1.1chr11: 22275380 .. 22279414 (+)
RNA-Seq ExpressionCmc11g0301781
SyntenyCmc11g0301781
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAGTGCTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATTTATAATGCCCGGATGAATGAGGGAGCCTCAGTGCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTGGCAGAAATGAATGGGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTCAACGAGCTACAGACTTTTGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTCGACCTCAGGAACTAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAGCCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAAACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGGTGCCACTAATCATGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGTTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAAATCTCAATAGGATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCGTAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTTACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACGTTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATTTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCATAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATCGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

mRNA sequence

ATGACGAGTGCTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATTTATAATGCCCGGATGAATGAGGGAGCCTCAGTGCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTGGCAGAAATGAATGGGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTCAACGAGCTACAGACTTTTGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTCGACCTCAGGAACTAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAGCCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAAACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGGTGCCACTAATCATGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGTTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAAATCTCAATAGGATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCGTAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTTACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACGTTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATTTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCATAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATCGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

Coding sequence (CDS)

ATGACGAGTGCTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATTTATAATGCCCGGATGAATGAGGGAGCCTCAGTGCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTGGCAGAAATGAATGGGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTCAACGAGCTACAGACTTTTGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTCGACCTCAGGAACTAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAGCCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAAACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGGTGCCACTAATCATGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGTTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAAATCTCAATAGGATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCGTAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTTACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACGTTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATTTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCATAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATCGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

Protein sequence

MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNVVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGRRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAFTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDVEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTIEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Homology
[Close]
BLAST of Cmc11g0301781 vs. NCBI nr
Match: KAA0031826.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0039313.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0043789.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0048789.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2664.4 bits (6905), Expect = 0.0e+00
Identity = 1337/1344 (99.48%), Postives = 1339/1344 (99.63%), Query Frame = 0 

Query: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKKG 240
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW KKKKG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW-KKKKG 240

Query: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300
            GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC
Sbjct: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300

Query: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360
            LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ
Sbjct: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360

Query: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNVVEICSAKLENNLYVL 420
            KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKN VEICSAKLENNLYVL
Sbjct: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVL 420

Query: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480
            RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE
Sbjct: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480

Query: 481  ENSLPVCESCLEGKMTKRPFTGKGRRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540
            ENSLPVCESCLEGKMTKRPFTGKG RAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY
Sbjct: 481  ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540

Query: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600
            SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV
Sbjct: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600

Query: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660
            SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS
Sbjct: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660

Query: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720
            ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD
Sbjct: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720

Query: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAFTRVVHVGSSTR 780
            NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA TRVVHVGSSTR
Sbjct: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTR 780

Query: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDVEDPLTFKKAMEDVDKDEWIKAM 840
            THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGD+EDPLTFKKAMEDVDKDEWIKAM
Sbjct: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAM 840

Query: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900
            NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD
Sbjct: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900

Query: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960
            YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE
Sbjct: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960

Query: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020
            QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD
Sbjct: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020

Query: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080
            ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV
Sbjct: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080

Query: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140
            KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY
Sbjct: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140

Query: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200
            AVGIVSRYQSNPGLAHWTAVKTILKY RRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK
Sbjct: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200

Query: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTIEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260
            STSGSVFTLNGGAVVWRSIKQGCIADST+EAEYVAACEAAKEAVWLRNFLIDLEVVPNMS
Sbjct: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260

Query: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320
            KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT
Sbjct: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320

Query: 1321 KPLTAKVFEGHLESLGLRDMPHLT 1345
            KPLTAKVFEGHLESLGLRDMPHLT
Sbjct: 1321 KPLTAKVFEGHLESLGLRDMPHLT 1343

[Close]
BLAST of Cmc11g0301781 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2662.9 bits (6901), Expect = 0.0e+00
Identity = 1336/1344 (99.40%), Postives = 1338/1344 (99.55%), Query Frame = 0 

Query: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKKG 240
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW KKKKG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW-KKKKG 240

Query: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300
            GQGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC
Sbjct: 241  GQGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300

Query: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360
            LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ
Sbjct: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360

Query: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNVVEICSAKLENNLYVL 420
            KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKN VEICSAKLENNLYVL
Sbjct: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVL 420

Query: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480
            RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE
Sbjct: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480

Query: 481  ENSLPVCESCLEGKMTKRPFTGKGRRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540
            ENSLPVCESCLEGKMTKRPFTGKG RAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY
Sbjct: 481  ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540

Query: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600
            SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV
Sbjct: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600

Query: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660
            SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS
Sbjct: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660

Query: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720
            ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD
Sbjct: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720

Query: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAFTRVVHVGSSTR 780
            NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA TRVVHVGSSTR
Sbjct: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTR 780

Query: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDVEDPLTFKKAMEDVDKDEWIKAM 840
            THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGD+EDPLTFKKAMEDVDKDEWIKAM
Sbjct: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAM 840

Query: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900
            NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD
Sbjct: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900

Query: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960
            YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE
Sbjct: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960

Query: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020
            QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD
Sbjct: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020

Query: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080
            ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV
Sbjct: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080

Query: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140
            KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY
Sbjct: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140

Query: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200
            AVGIVSRYQSNPGLAHWTAVKTILKY RRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK
Sbjct: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200

Query: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTIEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260
            STSGSVFTLNGGAVVWRSIKQGCIADST+EAEYVAACEAAKEAVWLRNFLIDLEVVPNMS
Sbjct: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260

Query: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320
            KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT
Sbjct: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320

Query: 1321 KPLTAKVFEGHLESLGLRDMPHLT 1345
            KPLTAKVFEGHLESLGLRDMPHLT
Sbjct: 1321 KPLTAKVFEGHLESLGLRDMPHLT 1343

[Close]
BLAST of Cmc11g0301781 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2658.2 bits (6889), Expect = 0.0e+00
Identity = 1336/1344 (99.40%), Postives = 1338/1344 (99.55%), Query Frame = 0 

Query: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
            MTSATLNMLAADKLNGNNYASWKNT NTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNT-NTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKKG 240
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW KKKKG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW-KKKKG 240

Query: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300
            GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC
Sbjct: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300

Query: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360
            LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ
Sbjct: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360

Query: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNVVEICSAKLENNLYVL 420
            KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKN VEICSAKLENNLYVL
Sbjct: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVL 420

Query: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480
            RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE
Sbjct: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480

Query: 481  ENSLPVCESCLEGKMTKRPFTGKGRRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540
            ENSLPVCESCLEGKMTKRPFTGKG RAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY
Sbjct: 481  ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540

Query: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600
            SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV
Sbjct: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600

Query: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660
            SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS
Sbjct: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660

Query: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720
            ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD
Sbjct: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720

Query: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAFTRVVHVGSSTR 780
            NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA TRVVHVGSSTR
Sbjct: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTR 780

Query: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDVEDPLTFKKAMEDVDKDEWIKAM 840
            THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGD+EDPLTFKKAMEDVDKDEWIKAM
Sbjct: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAM 840

Query: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900
            NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD
Sbjct: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900

Query: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960
            YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE
Sbjct: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960

Query: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020
            QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD
Sbjct: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020

Query: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080
            ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV
Sbjct: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080

Query: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140
            KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY
Sbjct: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140

Query: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200
            AVGIVSRYQSNPGLAHWTAVKTILKY RRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK
Sbjct: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200

Query: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTIEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260
            STSGSVFTLNGGAVVWRSIKQGCIADST+EAEYVAACEAAKEAVWLRNFLIDLEVVPNMS
Sbjct: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260

Query: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320
            KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT
Sbjct: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320

Query: 1321 KPLTAKVFEGHLESLGLRDMPHLT 1345
            KPLTAKVFEGHLESLGLRDMPHLT
Sbjct: 1321 KPLTAKVFEGHLESLGLRDMPHLT 1342

[Close]
BLAST of Cmc11g0301781 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2626.3 bits (6806), Expect = 0.0e+00
Identity = 1319/1326 (99.47%), Postives = 1321/1326 (99.62%), Query Frame = 0 

Query: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKKG 240
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW KKKKG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW-KKKKG 240

Query: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300
            GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC
Sbjct: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300

Query: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360
            LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ
Sbjct: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360

Query: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNVVEICSAKLENNLYVL 420
            KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKN VEICSAKLENNLYVL
Sbjct: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVL 420

Query: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480
            RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE
Sbjct: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480

Query: 481  ENSLPVCESCLEGKMTKRPFTGKGRRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540
            ENSLPVCESCLEGKMTKRPFTGKG RAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY
Sbjct: 481  ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540

Query: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600
            SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV
Sbjct: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600

Query: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660
            SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS
Sbjct: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660

Query: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720
            ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD
Sbjct: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720

Query: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAFTRVVHVGSSTR 780
            NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA TRVVHVGSSTR
Sbjct: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTR 780

Query: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDVEDPLTFKKAMEDVDKDEWIKAM 840
            THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGD+EDPLTFKKAMEDVDKDEWIKAM
Sbjct: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAM 840

Query: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900
            NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD
Sbjct: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900

Query: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960
            YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE
Sbjct: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960

Query: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020
            QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD
Sbjct: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020

Query: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080
            ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV
Sbjct: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080

Query: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140
            KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY
Sbjct: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140

Query: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200
            AVGIVSRYQSNPGLAHWTAVKTILKY RRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK
Sbjct: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200

Query: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTIEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260
            STSGSVFTLNGGAVVWRSIKQGCIADST+EAEYVAACEAAKEAVWLRNFLIDLEVVPNMS
Sbjct: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260

Query: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320
            KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT
Sbjct: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320

Query: 1321 KPLTAK 1327
            KPLTAK
Sbjct: 1321 KPLTAK 1325

[Close]
BLAST of Cmc11g0301781 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2624.7 bits (6802), Expect = 0.0e+00
Identity = 1318/1326 (99.40%), Postives = 1320/1326 (99.55%), Query Frame = 0 

Query: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKKG 240
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW KKKKG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW-KKKKG 240

Query: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300
            GQGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC
Sbjct: 241  GQGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300

Query: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360
            LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ
Sbjct: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360

Query: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNVVEICSAKLENNLYVL 420
            KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKN VEICSAKLENNLYVL
Sbjct: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVL 420

Query: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480
            RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE
Sbjct: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480

Query: 481  ENSLPVCESCLEGKMTKRPFTGKGRRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540
            ENSLPVCESCLEGKMTKRPFTGKG RAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY
Sbjct: 481  ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540

Query: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600
            SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV
Sbjct: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600

Query: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660
            SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS
Sbjct: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660

Query: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720
            ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD
Sbjct: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720

Query: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAFTRVVHVGSSTR 780
            NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA TRVVHVGSSTR
Sbjct: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTR 780

Query: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDVEDPLTFKKAMEDVDKDEWIKAM 840
            THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGD+EDPLTFKKAMEDVDKDEWIKAM
Sbjct: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAM 840

Query: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900
            NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD
Sbjct: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900

Query: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960
            YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE
Sbjct: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960

Query: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020
            QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD
Sbjct: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020

Query: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080
            ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV
Sbjct: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080

Query: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140
            KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY
Sbjct: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140

Query: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200
            AVGIVSRYQSNPGLAHWTAVKTILKY RRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK
Sbjct: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200

Query: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTIEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260
            STSGSVFTLNGGAVVWRSIKQGCIADST+EAEYVAACEAAKEAVWLRNFLIDLEVVPNMS
Sbjct: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260

Query: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320
            KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT
Sbjct: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320

Query: 1321 KPLTAK 1327
            KPLTAK
Sbjct: 1321 KPLTAK 1325

[Close]
BLAST of Cmc11g0301781 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 759.2 bits (1959), Expect = 7.8e-218
Identity = 480/1380 (34.78%), Postives = 736/1380 (53.33%), Query Frame = 0 

Query: 13   KLNGNN-YASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARA 72
            K NG+N +++W+  +  +LI   L  VL  +  +     A        E WA  +E+A +
Sbjct: 10   KFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKA--------EDWADLDERAAS 69

Query: 73   YILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREH 132
             I   LS+ +        TAR I   L+ ++   +   K    K +Y   M+EG +   H
Sbjct: 70   AIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSH 129

Query: 133  --VLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNEL 192
              V N ++   +A + G  I+E  +   +L SLP S+    +  +  K    L  + + L
Sbjct: 130  LNVFNGLI-TQLANL-GVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSAL 189

Query: 193  QTFESLMKIKGQKGEANVATST-RKFHRGSTSGTKSMPSSSGNKKWKKKKKGGQGNKANL 252
               E + K    +G+A +     R + R S +  +S               G +G     
Sbjct: 190  LLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRS---------------GARG----- 249

Query: 253  AAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYD-------------LL 312
               K+  ++K+    C++CNQ GH+KR+CP     K +    K D             +L
Sbjct: 250  ---KSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVL 309

Query: 313  VL---ETCL-VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIA 372
             +   E C+ +   +S W++D+ A++H          +   + G  T+++G         
Sbjct: 310  FINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFG--TVKMGNTSYSKIAG 369

Query: 373  VGGLRLCLQKSF---LLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNVVEI 432
            +G   +C++ +    L+L++V  VPDL+ NLIS   L    Y   F   K  + K  + I
Sbjct: 370  IGD--ICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVI 429

Query: 433  CSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIE 492
                    LY   +   +  LN    + ++               LWH R+GH++   ++
Sbjct: 430  AKGVARGTLYRTNAEICQGELNAAQDEISV--------------DLWHKRMGHMSEKGLQ 489

Query: 493  RLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGRRAKEPLELVHSDLCGPMNVKARG 552
             L K  L+S  +  ++  C+ CL GK  +  F     R    L+LV+SD+CGPM +++ G
Sbjct: 490  ILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMG 549

Query: 553  GFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL 612
            G +YF+TF DD SR  +VY+++ K +  + F+++ A VE    + +K  RSD GGEY   
Sbjct: 550  GNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSR 609

Query: 613  KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAV 672
            +F+ Y    GI  + + PGTPQ NGV+ER NRT+++ VRSM+  A LP SFWG AVQTA 
Sbjct: 610  EFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTAC 669

Query: 673  YILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCP--AHVLENNPKKLEPRSKLCLFVG 732
            Y++N  PS  ++ E P ++W  ++ S  H +++GC   AHV +    KL+ +S  C+F+G
Sbjct: 670  YLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIG 729

Query: 733  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNEL-------------- 792
            Y     G   +DP   KV  S +  F  E  +R     S+ V N +              
Sbjct: 730  YGDEEFGYRLWDPVKKKVIRSRDVVF-RESEVRTAADMSEKVKNGIIPNFVTIPSTSNNP 789

Query: 793  --SKETTEPSTRVVEEP-----------SAFTRVVHVGSSTRTHQPQSLREPRRSGRVTN 852
              ++ TT+  +   E+P                V H       HQP      RRS R   
Sbjct: 790  TSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPL-----RRSERPRV 849

Query: 853  LPIRYMSLTETLTVISDGDVEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQ 912
               RY S TE + +  D    +P + K+ +   +K++ +KAM  E+ES+  N  + LV+ 
Sbjct: 850  ESRRYPS-TEYVLISDD---REPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVEL 909

Query: 913  PDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILL 972
            P G +P+ CKW++K K+  D K+  +KARLV KG+ Q +G+D++E FSPV  + SIR +L
Sbjct: 910  PKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTIL 969

Query: 973  SIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASR 1032
            S+AA  D E+ Q+DVKTAFL+G+LEE IYM+QPEGF + G++  +CKLN+S+YGLKQA R
Sbjct: 970  SLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPR 1029

Query: 1033 SWNIRFDTAIKSYGFDQIVDEPCVY-KRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQW 1092
             W ++FD+ +KS  + +   +PCVY KR    +   L+LYVDD+L++G D GL+  +K  
Sbjct: 1030 QWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGD 1089

Query: 1093 LATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHG 1152
            L+  F MKDLG AQ +LG++I R+R ++ L LSQ  YI++++ +++M+N+K    P    
Sbjct: 1090 LSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGH 1149

Query: 1153 VTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHW 1212
            + LSK+ CP T ++   M  +PY+SAVGSLMYAM+CTRPDI +AVG+VSR+  NPG  HW
Sbjct: 1150 LKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHW 1209

Query: 1213 TAVKTILKYHRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWR 1272
             AVK IL+Y R T    L +G  D IL GYTD+D   D D+RKS++G +FT +GGA+ W+
Sbjct: 1210 EAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQ 1269

Query: 1273 SIKQGCIADSTIEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSR 1332
            S  Q C+A ST EAEY+AA E  KE +WL+ FL +L +     K   +YCD+  A+  S+
Sbjct: 1270 SKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL---HQKEYVVYCDSQSAIDLSK 1325

Query: 1333 EPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGL 1338
                H R KHI+ +YH IRE+V    + V +I++  N AD  TK +    FE   E +G+
Sbjct: 1330 NSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325

[Close]
BLAST of Cmc11g0301781 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 541.2 bits (1393), Expect = 3.3e-152
Identity = 420/1463 (28.71%), Postives = 684/1463 (46.75%), Query Frame = 0 

Query: 15   NGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYIL 74
            +G  YA WK  I  +L   D+  V+    P            E  + W KA   A++ I+
Sbjct: 12   DGEKYAIWKFRIRALLAEQDVLKVVDGLMP-----------NEVDDSWKKAERCAKSTII 71

Query: 75   ASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVRE--HV 134
              LS+       S +TAR+I+++L  ++ + S   +    K + + +++   S+    H+
Sbjct: 72   EYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHI 131

Query: 135  LNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTF 194
             + ++   +A   GA I+E  ++S +L +LP  +      A+       LT    + +  
Sbjct: 132  FDELISELLAA--GAKIEEMDKISHLLITLPSCY-DGIITAIETLSEENLTLAFVKNRLL 191

Query: 195  ESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKKGGQGNKANLAAAK 254
            +  +KIK    + +        H  + +                        K NL   +
Sbjct: 192  DQEIKIKNDHNDTSKKVMNAIVHNNNNT-----------------------YKNNLFKNR 251

Query: 255  TTKKAKAAKG------ICFHCNQEGHWKRNCPKY---LAEKKKAKQGKYDL-----LVLE 314
             TK  K  KG       C HC +EGH K++C  Y   L  K K  + +        +   
Sbjct: 252  VTKPKKIFKGNSKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFM 311

Query: 315  TCLVEN----DDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGG 374
               V N    D+  +++DSGA++H+ +     +   ++           G  + A   G 
Sbjct: 312  VKEVNNTSVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGI 371

Query: 375  LRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKN-VVEICSAKL 434
            +RL      + LE+V    +   NL+SVK L E   S+ F+ + V I KN ++ + ++ +
Sbjct: 372  VRL-RNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGM 431

Query: 435  ENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKN 494
             NN+ V+                   Q   +    K N  LWH R GHI+  ++  + + 
Sbjct: 432  LNNVPVIN-----------------FQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRK 491

Query: 495  GLLSELE-----ENSLPVCESCLEGKMTKRPFTGKGRRA--KEPLELVHSDLCGPMNVKA 554
             + S+       E S  +CE CL GK  + PF     +   K PL +VHSD+CGP+    
Sbjct: 492  NMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVT 551

Query: 555  RGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYM 614
                 YF+ F D ++ Y   YL+++KS+    F+++ A+ E   +  +     D G EY+
Sbjct: 552  LDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYL 611

Query: 615  DLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQT 674
              + + + ++ GI   L+ P TPQ NGVSER  RT+ +  R+M+S A L  SFWG AV T
Sbjct: 612  SNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLT 671

Query: 675  AVYILNCVPSKSV---SETPLKLWNGRKGSLRHFRIWGCPAHV-LENNPKKLEPRSKLCL 734
            A Y++N +PS+++   S+TP ++W+ +K  L+H R++G   +V ++N   K + +S   +
Sbjct: 672  ATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSI 731

Query: 735  FVGY-PKG--------------------------TRGGYFYD--------------PKDN 794
            FVGY P G                          +R   F                P D+
Sbjct: 732  FVGYEPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDS 791

Query: 795  KVFVST----------NATFLEEDHIREHK----PRSKIVLNELS------------KET 854
            +  + T          N  FL++    E+K       KI+  E              K++
Sbjct: 792  RKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDS 851

Query: 855  TEPSTRVVEEPSAFTRVVHVGSSTRTHQPQSLREP------------------------R 914
             E +   + E     R  H+  S  +  P   RE                         R
Sbjct: 852  KESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINR 911

Query: 915  RSGRVTNLP-IRYMSLTETL--TVISDGDV--EDPLTFKKAMEDVDKDEWIKAMNLELES 974
            RS R+   P I Y     +L   V++   +  + P +F +     DK  W +A+N EL +
Sbjct: 912  RSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNA 971

Query: 975  MYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFS 1034
               N+ W +  +P+    +  +W++  K    G    +KARLVA+G+TQ   +DYEETF+
Sbjct: 972  HKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFA 1031

Query: 1035 PVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKL 1094
            PVA + S R +LS+   ++ ++ QMDVKTAFLNG L+E IYM+ P+G  I      +CKL
Sbjct: 1032 PVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKL 1091

Query: 1095 NRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY---KRIINKSVAFLVLYVDDILL 1154
            N++IYGLKQA+R W   F+ A+K   F     + C+Y   K  IN+++ +++LYVDD+++
Sbjct: 1092 NKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI-YVLLYVDDVVI 1151

Query: 1155 IGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYS 1214
               D+  + + K++L  +F+M DL E +  +GI+I  + +   + LSQ++Y+ KI+ K++
Sbjct: 1152 ATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFN 1211

Query: 1215 MQNSKRGLLP----FRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDIC 1274
            M+N      P      + +  S E C           + P  S +G LMY MLCTRPD+ 
Sbjct: 1212 MENCNAVSTPLPSKINYELLNSDEDC-----------NTPCRSLIGCLMYIMLCTRPDLT 1271

Query: 1275 YAVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYTLVYGSKDLI----LTGYTDSDFQTD 1334
             AV I+SRY S      W  +K +L+Y + T D  L++  K+L     + GY DSD+   
Sbjct: 1272 TAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF-KKNLAFENKIIGYVDSDWAGS 1331

Query: 1335 RDSRKSTSGSVFTL-NGGAVVWRSIKQGCIADSTIEAEYVAACEAAKEAVWLRNFLIDLE 1338
               RKST+G +F + +   + W + +Q  +A S+ EAEY+A  EA +EA+WL+  L  + 
Sbjct: 1332 EIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSIN 1391

[Close]
BLAST of Cmc11g0301781 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 2.7e-133
Identity = 402/1488 (27.02%), Postives = 647/1488 (43.48%), Query Frame = 0 

Query: 6    LNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPA---ANATRTVREPYERW 65
            +NM    KL   NY  W   ++ +    +L   L       PA    +A   V   Y RW
Sbjct: 18   VNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRW 77

Query: 66   AKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY----QIKHDALKYIY 125
             + ++   + +L ++S  +        TA +I ++L++++   SY    Q++    ++  
Sbjct: 78   KRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTK 137

Query: 126  NARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKI 185
              +     ++ +++  ++  F+   + G  +D   QV  +LE+LPE +            
Sbjct: 138  GTK-----TIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDT 197

Query: 186  AYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK 245
              TLT +   L   ES  KI        +  +       +T+ T +  +++GN+  +   
Sbjct: 198  PPTLTEIHERLLNHES--KILAVSSATVIPITANAVSHRNTTTTNN--NNNGNRNNRYDN 257

Query: 246  KGGQGNKANLAAAKT-----TKKAKAAKGICFHCNQEGHWKRNCP--KYLAEKKKAKQGK 305
            +    N      + T       ++K   G C  C  +GH  + C   ++      ++Q  
Sbjct: 258  RNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPP 317

Query: 306  YDL--------LVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGT 365
                       L L +    N+   W++DSGAT+H+ S F  + S  Q  TG   + V  
Sbjct: 318  SPFTPWQPRANLALGSPYSSNN---WLLDSGATHHITSDFNNL-SLHQPYTGGDDVMVAD 377

Query: 366  GHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYK 425
            G  +     G   L  +   L L N+  VP++ +NLISV       Y L  N N V +  
Sbjct: 378  GSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISV-------YRLC-NANGVSVEF 437

Query: 426  NVVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENA--HLWHLRLGH 485
                     L   + +L+  T   L     +  A +Q   L  SP   A    WH RLGH
Sbjct: 438  FPASFQVKDLNTGVPLLQGKTKDELYE---WPIASSQPVSLFASPSSKATHSSWHARLGH 497

Query: 486  INLNRIERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGRRAKEPLELVHSDLCG 545
               + +  ++ N  LS L   +    C  CL  K  K PF+     +  PLE ++SD+  
Sbjct: 498  PAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS 557

Query: 546  PMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSD 605
               + +   + Y++ F D ++RY ++Y ++ KS+  E F  +K  +EN     I TF SD
Sbjct: 558  -SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSD 617

Query: 606  RGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFW 665
             GGE++ L    Y  + GI    S P TP+ NG+SER++R +++   +++S+A +P ++W
Sbjct: 618  NGGEFVAL--WEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYW 677

Query: 666  GYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKKLEPR 725
             YA   AVY++N +P+  +  E+P +   G   +    R++GC  +  +   N  KL+ +
Sbjct: 678  PYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDK 737

Query: 726  SKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE-----------DHIREHKPRSKI 785
            S+ C+F+GY            + +++++S +  F E              ++E +  S  
Sbjct: 738  SRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSC 797

Query: 786  VLNELSKETTEPSTRVV----------------EEPSAFTRVVHVGSS------------ 845
            V    S  TT P+   V                  PSA  R   V SS            
Sbjct: 798  V---WSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPS 857

Query: 846  ----------------------TRTHQ-----------------PQSLREPRRSGRVTNL 905
                                  T+TH                   QSL  P +S   +  
Sbjct: 858  SPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPS 917

Query: 906  PIRYMSLTET--------------LTVISDGDVEDPLTF--------------------- 965
            P    S + T              L  I + + + PL                       
Sbjct: 918  PTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLA 977

Query: 966  ---------KKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDG-VKPIGCKWIYKRK 1025
                     + A++ +  + W  AM  E+ +   N  WDLV  P   V  +GC+WI+ +K
Sbjct: 978  VSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKK 1037

Query: 1026 RGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVK 1085
              +DG +  +KARLVAKGY Q  G+DY ETFSPV    SIRI+L +A    + I Q+DV 
Sbjct: 1038 YNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVN 1097

Query: 1086 TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 1145
             AFL G L + +YM QP GFI   +   +CKL +++YGLKQA R+W +     + + GF 
Sbjct: 1098 NAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFV 1157

Query: 1146 QIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVL 1205
              V +  ++     KS+ ++++YVDDIL+ GND  LL +    L+ +F +KD  E  + L
Sbjct: 1158 NSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFL 1217

Query: 1206 GIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEE 1265
            GI+    R    L LSQ  YI  ++ + +M  +K    P      LS     K     E 
Sbjct: 1218 GIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE- 1277

Query: 1266 MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYT 1325
                 Y   VGSL Y +  TRPDI YAV  +S++   P   H  A+K IL+Y   T ++ 
Sbjct: 1278 -----YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHG 1337

Query: 1326 L-VYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTIEAEY 1342
            + +     L L  Y+D+D+  D+D   ST+G +  L    + W S KQ  +  S+ EAEY
Sbjct: 1338 IFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEY 1397

[Close]
BLAST of Cmc11g0301781 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.5e-131
Identity = 395/1487 (26.56%), Postives = 639/1487 (42.97%), Query Frame = 0 

Query: 6    LNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPA---ANATRTVREPYERW 65
            +NM    KL   NY  W   ++ +    +L   L    P  PA    +A   V   Y RW
Sbjct: 18   VNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRW 77

Query: 66   AKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARM 125
             + ++   + IL ++S  +        TA +I ++L++++   SY               
Sbjct: 78   RRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSY--------------- 137

Query: 126  NEGASVREHV--LNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 185
                    HV  L  +  F+   + G  +D   QV  +LE+LP+ +              
Sbjct: 138  -------GHVTQLRFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPP 197

Query: 186  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW-KKKKK 245
            +LT +   L   ES + +     E    T+    HR +T+  ++  +   N+ +     +
Sbjct: 198  SLTEIHERLINRESKL-LALNSAEVVPITANVVTHR-NTNTNRNQNNRGDNRNYNNNNNR 257

Query: 246  GGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK----------- 305
                  ++  +    ++ K   G C  C+ +GH  + CP+    +               
Sbjct: 258  SNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPW 317

Query: 306  QGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVS 365
            Q + +L V       N    W++DSGAT+H+ S F  + S+ Q  TG   + +  G  + 
Sbjct: 318  QPRANLAVNSPYNANN----WLLDSGATHHITSDFNNL-SFHQPYTGGDDVMIADGSTIP 377

Query: 366  AIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNVVEI 425
                G   L      L L  V  VP++ +NLISV       Y L  N N+V +       
Sbjct: 378  ITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISV-------YRLC-NTNRVSVEFFPASF 437

Query: 426  CSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISP--KENAHLWHLRLGHINLNR 485
                L   + +L+  T   L     +  A +Q   +  SP  K     WH RLGH +L  
Sbjct: 438  QVKDLNTGVPLLQGKTKDELYE---WPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAI 497

Query: 486  IERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGRRAKEPLELVHSDLCGPMNVK 545
            +  ++ N  L  L   + L  C  C   K  K PF+     + +PLE ++SD+     + 
Sbjct: 498  LNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPIL 557

Query: 546  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 605
            +   + Y++ F D ++RY ++Y ++ KS+  + F  +K+ VEN     I T  SD GGE+
Sbjct: 558  SIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEF 617

Query: 606  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 665
            + L+  +YL + GI    S P TP+ NG+SER++R +++M  +++S+A +P ++W YA  
Sbjct: 618  VVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFS 677

Query: 666  TAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKKLEPRSKLCL 725
             AVY++N +P+  +  ++P +   G+  +    +++GC  +  +   N  KLE +SK C 
Sbjct: 678  VAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCA 737

Query: 726  FVGY------------PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHK--------- 785
            F+GY            P G      +   D + F  +   F       +           
Sbjct: 738  FMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSH 797

Query: 786  ---PRSKIVL-------------------------------NELSKETTEPSTRVVEEPS 845
               P + +VL                               N  S   + PS+     PS
Sbjct: 798  TTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPS 857

Query: 846  ----AFTRVVHVGSSTRTHQP---------QSLREPRRSGRVTNLPIRYMSLTETLTVIS 905
                  T   H   ++ ++ P          S   P ++  +   PI    +    T IS
Sbjct: 858  HNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSIS 917

Query: 906  DGDV-------------------------------------------------------- 965
            + +                                                         
Sbjct: 918  EPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLA 977

Query: 966  --EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLV-DQPDGVKPIGCKWIYKRKR 1025
               +P T  +AM+D   D W +AM  E+ +   N  WDLV   P  V  +GC+WI+ +K 
Sbjct: 978  ANSEPRTAIQAMKD---DRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKF 1037

Query: 1026 GADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKT 1085
             +DG +  +KARLVAKGY Q  G+DY ETFSPV    SIRI+L +A    + I Q+DV  
Sbjct: 1038 NSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNN 1097

Query: 1086 AFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ 1145
            AFL G L + +YM QP GF+   +   +C+L ++IYGLKQA R+W +   T + + GF  
Sbjct: 1098 AFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVN 1157

Query: 1146 IVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLG 1205
             + +  ++     +S+ ++++YVDDIL+ GND  LL      L+ +F +K+  +  + LG
Sbjct: 1158 SISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLG 1217

Query: 1206 IQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEM 1265
            I+    R  + L LSQ  Y   ++ + +M  +K    P      L+     K P   E  
Sbjct: 1218 IE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE-- 1277

Query: 1266 RHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYTL 1325
                Y   VGSL Y +  TRPD+ YAV  +S+Y   P   HW A+K +L+Y   T D+ +
Sbjct: 1278 ----YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGI 1337

Query: 1326 -VYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTIEAEYV 1342
             +     L L  Y+D+D+  D D   ST+G +  L    + W S KQ  +  S+ EAEY 
Sbjct: 1338 FLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYR 1397

[Close]
BLAST of Cmc11g0301781 vs. ExPASy Swiss-Prot
Match: Q12269 (Transposon Ty1-GR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-GR2 PE=3 SV=3)

HSP 1 Score: 155.6 bits (392), Expect = 3.9e-36
Identity = 274/1276 (21.47%), Postives = 458/1276 (35.89%), Query Frame = 0 

Query: 351  AVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNVVEICS 410
            A+G L+   Q +      V   P++  +L+S+  L     +  F  N +      V    
Sbjct: 498  AIGDLQFHFQDNTKTSIKVLHTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPI 557

Query: 411  AKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERL 470
             K  +  +V    + K LL + +    I      + + K      H  L H N   I   
Sbjct: 558  VKYGDFYWV----SKKYLLPSNISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYS 617

Query: 471  VKNGLLSELEENSLP-------VCESCLEGKMTKRPFTGKGRRAK-----EPLELVHSDL 530
            +KN  ++   E+ +         C  CL GK TK     KG R K     EP + +H+D+
Sbjct: 618  LKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHI-KGSRLKYQNSYEPFQYLHTDI 677

Query: 531  CGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE--ALEKFKEYKAEVENALSKTIKT 590
             GP++        YFI+FTD+ +++ +VY +  + E   L+ F    A ++N    ++  
Sbjct: 678  FGPVHNLPNSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLV 737

Query: 591  FRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLP 650
             + DRG EY +     +L + GI    +     + +GV+ER NRTLLD  R+ +  + LP
Sbjct: 738  IQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLP 797

Query: 651  NSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG-SLRHFRIWGCPAHVLENNP-KKL 710
            N  W  A++ +  + N + S   S+   +   G  G  +     +G P  V ++NP  K+
Sbjct: 798  NHLWFSAIEFSTIVRNSLASPK-SKKSARQHAGLAGLDISTLLPFGQPVIVNDHNPNSKI 857

Query: 711  EPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL---------------------- 770
             PR      +   + + G   Y P   K   +TN   L                      
Sbjct: 858  HPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLN 917

Query: 771  -----------------------EEDH-----IREHKPRSKIVLNELSKET--------T 830
                                   E DH     I  H  + + VL++    T        T
Sbjct: 918  RLTASYHSFIASNEIQESNDLNIESDHDFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHT 977

Query: 831  EPSTRVVEEPSAFTRVVH--------VGSSTRTHQPQ-SLREPRRSGRV----------- 890
            E S RV +      R V         + S  R+  PQ S  E   SG +           
Sbjct: 978  EDSKRVSKTNIRAPREVDPNISESNILPSKKRSSTPQISNIESTGSGGMHKLNVPLLAPM 1037

Query: 891  ------------------------------TNLPIRYMSLTETLTV--ISDGDVE----- 950
                                          TN+PI     T   TV  ISD + E     
Sbjct: 1038 SQSNTHESSHASKSKDFRHSDSYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIH 1097

Query: 951  ------------------------------------------------------DPL--- 1010
                                                                  DP    
Sbjct: 1098 RSPSIDASPPENNSSHNIVPIKTPTTVSEQNTEESIIADLPLPDLPPESPTEFPDPFKEL 1157

Query: 1011 -------------------------TFKKAMED------VDKDEW--------------- 1070
                                     + K+++ED      V +D W               
Sbjct: 1158 PPINSHQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKK 1217

Query: 1071 ---------------------------------------IKAMNLELESMYFNSVWDL-- 1130
                                                   I+A + E+  +   + WD   
Sbjct: 1218 RIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMNTWDTDK 1277

Query: 1131 ---VDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 1190
                 + D  + I   +I+ RKR  DG   T KAR VA+G  Q          S      
Sbjct: 1278 YYDRKEIDPKRVINSMFIFNRKR--DG---THKARFVARGDIQHPDTYDSGMQSNTVHHY 1337

Query: 1191 SIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 1250
            ++   LS+A   +Y I Q+D+ +A+L  +++E +Y++ P      G   K+ +L +S+YG
Sbjct: 1338 ALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHL---GMNDKLIRLKKSLYG 1397

Query: 1251 LKQASRSWNIRFDT-AIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLL 1310
            LKQ+  +W     +  IK  G +++    CV+K     S   + L+VDD++L   D+   
Sbjct: 1398 LKQSGANWYETIKSYLIKQCGMEEVRGWSCVFK----NSQVTICLFVDDMILFSKDLNAN 1457

Query: 1311 TDIKQWLATQFQMK--DLGEAQ-----FVLGIQIFRDRKNKMLALSQASYIDKIVVKYSM 1330
              I   L  Q+  K  +LGE+       +LG++I + ++ K + L   + + + + K ++
Sbjct: 1458 KKIITTLKKQYDTKIINLGESDNEIQYDILGLEI-KYQRGKYMKLGMENSLTEKIPKLNV 1517

[Close]
BLAST of Cmc11g0301781 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 2664.4 bits (6905), Expect = 0.0e+00
Identity = 1337/1344 (99.48%), Postives = 1339/1344 (99.63%), Query Frame = 0 

Query: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKKG 240
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW KKKKG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW-KKKKG 240

Query: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300
            GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC
Sbjct: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300

Query: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360
            LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ
Sbjct: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360

Query: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNVVEICSAKLENNLYVL 420
            KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKN VEICSAKLENNLYVL
Sbjct: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVL 420

Query: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480
            RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE
Sbjct: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480

Query: 481  ENSLPVCESCLEGKMTKRPFTGKGRRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540
            ENSLPVCESCLEGKMTKRPFTGKG RAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY
Sbjct: 481  ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540

Query: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600
            SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV
Sbjct: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600

Query: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660
            SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS
Sbjct: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660

Query: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720
            ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD
Sbjct: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720

Query: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAFTRVVHVGSSTR 780
            NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA TRVVHVGSSTR
Sbjct: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTR 780

Query: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDVEDPLTFKKAMEDVDKDEWIKAM 840
            THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGD+EDPLTFKKAMEDVDKDEWIKAM
Sbjct: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAM 840

Query: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900
            NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD
Sbjct: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900

Query: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960
            YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE
Sbjct: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960

Query: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020
            QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD
Sbjct: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020

Query: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080
            ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV
Sbjct: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080

Query: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140
            KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY
Sbjct: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140

Query: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200
            AVGIVSRYQSNPGLAHWTAVKTILKY RRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK
Sbjct: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200

Query: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTIEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260
            STSGSVFTLNGGAVVWRSIKQGCIADST+EAEYVAACEAAKEAVWLRNFLIDLEVVPNMS
Sbjct: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260

Query: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320
            KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT
Sbjct: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320

Query: 1321 KPLTAKVFEGHLESLGLRDMPHLT 1345
            KPLTAKVFEGHLESLGLRDMPHLT
Sbjct: 1321 KPLTAKVFEGHLESLGLRDMPHLT 1343

[Close]
BLAST of Cmc11g0301781 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 2662.9 bits (6901), Expect = 0.0e+00
Identity = 1336/1344 (99.40%), Postives = 1338/1344 (99.55%), Query Frame = 0 

Query: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKKG 240
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW KKKKG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW-KKKKG 240

Query: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300
            GQGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC
Sbjct: 241  GQGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300

Query: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360
            LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ
Sbjct: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360

Query: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNVVEICSAKLENNLYVL 420
            KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKN VEICSAKLENNLYVL
Sbjct: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVL 420

Query: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480
            RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE
Sbjct: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480

Query: 481  ENSLPVCESCLEGKMTKRPFTGKGRRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540
            ENSLPVCESCLEGKMTKRPFTGKG RAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY
Sbjct: 481  ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540

Query: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600
            SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV
Sbjct: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600

Query: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660
            SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS
Sbjct: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660

Query: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720
            ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD
Sbjct: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720

Query: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAFTRVVHVGSSTR 780
            NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA TRVVHVGSSTR
Sbjct: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTR 780

Query: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDVEDPLTFKKAMEDVDKDEWIKAM 840
            THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGD+EDPLTFKKAMEDVDKDEWIKAM
Sbjct: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAM 840

Query: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900
            NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD
Sbjct: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900

Query: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960
            YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE
Sbjct: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960

Query: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020
            QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD
Sbjct: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020

Query: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080
            ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV
Sbjct: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080

Query: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140
            KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY
Sbjct: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140

Query: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200
            AVGIVSRYQSNPGLAHWTAVKTILKY RRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK
Sbjct: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200

Query: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTIEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260
            STSGSVFTLNGGAVVWRSIKQGCIADST+EAEYVAACEAAKEAVWLRNFLIDLEVVPNMS
Sbjct: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260

Query: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320
            KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT
Sbjct: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320

Query: 1321 KPLTAKVFEGHLESLGLRDMPHLT 1345
            KPLTAKVFEGHLESLGLRDMPHLT
Sbjct: 1321 KPLTAKVFEGHLESLGLRDMPHLT 1343

[Close]
BLAST of Cmc11g0301781 vs. ExPASy TrEMBL
Match: A0A5A7TZD7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001300 PE=4 SV=1)

HSP 1 Score: 2658.2 bits (6889), Expect = 0.0e+00
Identity = 1336/1344 (99.40%), Postives = 1338/1344 (99.55%), Query Frame = 0 

Query: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
            MTSATLNMLAADKLNGNNYASWKNT NTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNT-NTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKKG 240
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW KKKKG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW-KKKKG 240

Query: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300
            GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC
Sbjct: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300

Query: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360
            LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ
Sbjct: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360

Query: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNVVEICSAKLENNLYVL 420
            KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKN VEICSAKLENNLYVL
Sbjct: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVL 420

Query: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480
            RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE
Sbjct: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480

Query: 481  ENSLPVCESCLEGKMTKRPFTGKGRRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540
            ENSLPVCESCLEGKMTKRPFTGKG RAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY
Sbjct: 481  ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540

Query: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600
            SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV
Sbjct: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600

Query: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660
            SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS
Sbjct: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660

Query: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720
            ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD
Sbjct: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720

Query: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAFTRVVHVGSSTR 780
            NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA TRVVHVGSSTR
Sbjct: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTR 780

Query: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDVEDPLTFKKAMEDVDKDEWIKAM 840
            THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGD+EDPLTFKKAMEDVDKDEWIKAM
Sbjct: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAM 840

Query: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900
            NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD
Sbjct: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900

Query: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960
            YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE
Sbjct: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960

Query: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020
            QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD
Sbjct: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020

Query: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080
            ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV
Sbjct: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080

Query: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140
            KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY
Sbjct: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140

Query: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200
            AVGIVSRYQSNPGLAHWTAVKTILKY RRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK
Sbjct: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200

Query: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTIEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260
            STSGSVFTLNGGAVVWRSIKQGCIADST+EAEYVAACEAAKEAVWLRNFLIDLEVVPNMS
Sbjct: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260

Query: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320
            KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT
Sbjct: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320

Query: 1321 KPLTAKVFEGHLESLGLRDMPHLT 1345
            KPLTAKVFEGHLESLGLRDMPHLT
Sbjct: 1321 KPLTAKVFEGHLESLGLRDMPHLT 1342

[Close]
BLAST of Cmc11g0301781 vs. ExPASy TrEMBL
Match: A0A5A7UGV2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002690 PE=4 SV=1)

HSP 1 Score: 2626.3 bits (6806), Expect = 0.0e+00
Identity = 1319/1326 (99.47%), Postives = 1321/1326 (99.62%), Query Frame = 0 

Query: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKKG 240
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW KKKKG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW-KKKKG 240

Query: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300
            GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC
Sbjct: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300

Query: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360
            LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ
Sbjct: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360

Query: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNVVEICSAKLENNLYVL 420
            KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKN VEICSAKLENNLYVL
Sbjct: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVL 420

Query: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480
            RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE
Sbjct: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480

Query: 481  ENSLPVCESCLEGKMTKRPFTGKGRRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540
            ENSLPVCESCLEGKMTKRPFTGKG RAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY
Sbjct: 481  ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540

Query: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600
            SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV
Sbjct: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600

Query: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660
            SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS
Sbjct: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660

Query: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720
            ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD
Sbjct: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720

Query: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAFTRVVHVGSSTR 780
            NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA TRVVHVGSSTR
Sbjct: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTR 780

Query: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDVEDPLTFKKAMEDVDKDEWIKAM 840
            THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGD+EDPLTFKKAMEDVDKDEWIKAM
Sbjct: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAM 840

Query: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900
            NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD
Sbjct: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900

Query: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960
            YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE
Sbjct: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960

Query: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020
            QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD
Sbjct: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020

Query: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080
            ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV
Sbjct: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080

Query: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140
            KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY
Sbjct: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140

Query: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200
            AVGIVSRYQSNPGLAHWTAVKTILKY RRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK
Sbjct: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200

Query: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTIEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260
            STSGSVFTLNGGAVVWRSIKQGCIADST+EAEYVAACEAAKEAVWLRNFLIDLEVVPNMS
Sbjct: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260

Query: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320
            KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT
Sbjct: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320

Query: 1321 KPLTAK 1327
            KPLTAK
Sbjct: 1321 KPLTAK 1325

[Close]
BLAST of Cmc11g0301781 vs. ExPASy TrEMBL
Match: A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)

HSP 1 Score: 2624.7 bits (6802), Expect = 0.0e+00
Identity = 1318/1326 (99.40%), Postives = 1320/1326 (99.55%), Query Frame = 0 

Query: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKKG 240
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW KKKKG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW-KKKKG 240

Query: 241  GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300
            GQGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC
Sbjct: 241  GQGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETC 300

Query: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360
            LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ
Sbjct: 301  LVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 360

Query: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNVVEICSAKLENNLYVL 420
            KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKN VEICSAKLENNLYVL
Sbjct: 361  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVL 420

Query: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480
            RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE
Sbjct: 421  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 480

Query: 481  ENSLPVCESCLEGKMTKRPFTGKGRRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540
            ENSLPVCESCLEGKMTKRPFTGKG RAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY
Sbjct: 481  ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDY 540

Query: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600
            SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV
Sbjct: 541  SRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 600

Query: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660
            SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS
Sbjct: 601  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS 660

Query: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720
            ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD
Sbjct: 661  ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKD 720

Query: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAFTRVVHVGSSTR 780
            NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA TRVVHVGSSTR
Sbjct: 721  NKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTR 780

Query: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDVEDPLTFKKAMEDVDKDEWIKAM 840
            THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGD+EDPLTFKKAMEDVDKDEWIKAM
Sbjct: 781  THQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAM 840

Query: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900
            NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD
Sbjct: 841  NLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVD 900

Query: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960
            YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE
Sbjct: 901  YEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE 960

Query: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020
            QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD
Sbjct: 961  QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDD 1020

Query: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080
            ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV
Sbjct: 1021 ILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVV 1080

Query: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140
            KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY
Sbjct: 1081 KYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICY 1140

Query: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200
            AVGIVSRYQSNPGLAHWTAVKTILKY RRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK
Sbjct: 1141 AVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRK 1200

Query: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTIEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260
            STSGSVFTLNGGAVVWRSIKQGCIADST+EAEYVAACEAAKEAVWLRNFLIDLEVVPNMS
Sbjct: 1201 STSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1260

Query: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320
            KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT
Sbjct: 1261 KPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFT 1320

Query: 1321 KPLTAK 1327
            KPLTAK
Sbjct: 1321 KPLTAK 1325

[Close]
BLAST of Cmc11g0301781 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 304.3 bits (778), Expect = 4.9e-82
Identity = 172/484 (35.54%), Postives = 276/484 (57.02%), Query Frame = 0 

Query: 819  EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGAD 878
            ++P T+ +A E +    W  AM+ E+ +M     W++   P   KPIGCKW+YK K  +D
Sbjct: 84   KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 879  GKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFL 938
            G ++ +KARLVAKGYTQ EG+D+ ETFSPV  L S++++L+I+A +++ + Q+D+  AFL
Sbjct: 144  GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 939  NGNLEETIYMQQPEGFIIPGQE----QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 998
            NG+L+E IYM+ P G+     +      +C L +SIYGLKQASR W ++F   +  +GF 
Sbjct: 204  NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 999  QIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVL 1058
            Q   +   + +I       +++YVDDI++  N+   + ++K  L + F+++DLG  ++ L
Sbjct: 264  QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 1059 GIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEE 1118
            G++I R      + + Q  Y   ++ +  +   K   +P    VT S      +  D  +
Sbjct: 324  GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH----SGGDFVD 383

Query: 1119 MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYT 1178
             +   Y   +G LMY  + TR DI +AV  +S++   P LAH  AV  IL Y + T    
Sbjct: 384  AK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 443

Query: 1179 LVYGSK-DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTIEAEY 1238
            L Y S+ ++ L  ++D+ FQ+ +D+R+ST+G    L    + W+S KQ  ++ S+ EAEY
Sbjct: 444  LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 503

Query: 1239 VAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYH 1298
             A   A  E +WL  F  +L++   +SKP  L+CDN+ A+  +     H+R KHIE   H
Sbjct: 504  RALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCH 553

[Close]
BLAST of Cmc11g0301781 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-22
Identity = 81/236 (34.32%), Postives = 120/236 (50.85%), Query Frame = 0 

Query: 1013 FLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQA 1072
            +L+LYVDDILL G+   LL  +   L++ F MKDLG   + LGIQI        L LSQ 
Sbjct: 2    YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 1073 SYIDKIVVKYSMQNSK--RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYA 1132
             Y ++I+    M + K     LP +   ++S  + P  P D        + S VG+L Y 
Sbjct: 62   KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSD--------FRSIVGALQYL 121

Query: 1133 MLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYHRRTRDYTL-VYGSKDLILTGYTD 1192
             L TRPDI YAV IV +    P LA +  +K +L+Y + T  + L ++ +  L +  + D
Sbjct: 122  TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 1193 SDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTIEAEYVAACEAAKEAVW 1246
            SD+     +R+ST+G    L    + W + +Q  ++ S+ E EY A    A E  W
Sbjct: 182  SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]
BLAST of Cmc11g0301781 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 84.3 bits (207), Expect = 7.9e-16
Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = 0 

Query: 791 RRSGRVTNLPIRYMSLTETLTVISDGDVEDPLTFKKAMEDVDKDEWIKAMNLELESMYFN 850
           R    +  L  +Y SLT T T+      ++P +   A++D     W +AM  EL+++  N
Sbjct: 4   RSKAGINKLNPKY-SLTITTTI-----KKEPKSVIFALKD---PGWCQAMQEELDALSRN 63

Query: 851 SVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAM 910
             W LV  P     +GCKW++K K  +DG +   KARLVAKG+ Q EG+ + ET+SPV  
Sbjct: 64  KTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVR 123

Query: 911 LKSIRILLSIA 922
             +IR +L++A
Sbjct: 124 TATIRTILNVA 125

[Close]
BLAST of Cmc11g0301781 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 64.7 bits (156), Expect = 6.5e-10
Identity = 33/86 (38.37%), Postives = 45/86 (52.33%), Query Frame = 0 

Query: 439 TQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKR 498
           T    L  + K+   LWH RL H++   +E LVK G L   + +SL  CE C+ GK  + 
Sbjct: 56  TGESNLAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRV 115

Query: 499 PFTGKGRRAKEPLELVHSDLCGPMNV 525
            F+      K PL+ VHSDL G  +V
Sbjct: 116 NFSTGQHTTKNPLDYVHSDLWGAPSV 141

[Close]
BLAST of Cmc11g0301781 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 6.7e-07
Identity = 29/82 (35.37%), Postives = 49/82 (59.76%), Query Frame = 0 

Query: 619 NRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHF 678
           NRT+++ VRSM+    LP +F   A  TAV+I+N  PS +++   P ++W     +  + 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 679 RIWGCPAHVLENNPKKLEPRSK 700
           R +GC A++   +  KL+PR+K
Sbjct: 62  RRFGCVAYI-HCDEGKLKPRAK 82

The following BLAST results are available for this feature:
BLAST of Cmc11g0301781 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0031826.10.0e+0099.48gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumi... [more]
KAA0035879.10.0e+0099.40gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi... [more]
KAA0048404.10.0e+0099.40gag/pol protein [Cucumis melo var. makuwa][more]
KAA0054490.10.0e+0099.47gag/pol protein [Cucumis melo var. makuwa][more]
TYK14550.10.0e+0099.40gag/pol protein [Cucumis melo var. makuwa][more]
BLAST of Cmc11g0301781 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109787.8e-21834.78Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041463.3e-15228.71Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q94HW22.7e-13327.02Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT941.5e-13126.56Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q122693.9e-3621.47Transposon Ty1-GR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
BLAST of Cmc11g0301781 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SMH80.0e+0099.48Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025... [more]
A0A5D3CPJ60.0e+0099.40Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004... [more]
A0A5A7TZD70.0e+0099.40Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G0013... [more]
A0A5A7UGV20.0e+0099.47Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00269... [more]
A0A5D3CSZ60.0e+0099.40Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032... [more]
BLAST of Cmc11g0301781 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.14.9e-8235.54cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.11.5e-2234.32DNA/RNA polymerases superfamily protein [more]
ATMG00820.17.9e-1637.40Reverse transcriptase (RNA-dependent DNA polymerase) [more]
ATMG00300.16.5e-1038.37Gag-Pol-related retrotransposon family protein [more]
ATMG00710.16.7e-0735.37Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 552..572
NoneNo IPR availableGENE3D4.10.60.10coord: 256..297
e-value: 5.5E-7
score: 31.8
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 62..193
e-value: 2.5E-17
score: 62.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..248
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 309..1171
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1185..1326
e-value: 1.07399E-62
score: 207.706
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 263..279
e-value: 2.3E-4
score: 30.5
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 263..279
e-value: 2.8E-5
score: 24.0
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 264..279
score: 10.097754
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 508..609
e-value: 1.1E-10
score: 41.7
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 506..671
score: 23.412086
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 503..679
e-value: 3.2E-39
score: 136.3
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 446..495
e-value: 5.1E-14
score: 51.9
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 850..1093
e-value: 1.3E-75
score: 254.1
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 255..284
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 850..1293
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 506..665

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0301781.1Cmc11g0301781.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding