Cmc11g0301701 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0301701
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr11: 22148677 .. 22149084 (+)
RNA-Seq ExpressionCmc11g0301701
SyntenyCmc11g0301701
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAGAGAGACATTGATTTGAAAGTTTAAAAAAAAAACCATGTTTGTTCCAAATTCAAGCATGGTGTTCGGGGTCAGGTCCACCCGGGACGATCCTCTCAGAACCGACGAGAGATCGTTGGGTACGGTGAGGGTGGATGTTGTGGAGGTGAAAGGCCAACAATTCATGAAGAAGAAGTTGGTTTGTTTGTGGTGGAATTATTTGTGCTGCAATGAGATGGTTTTTTTGCAGAACTCTGGCCTGAGTGGAGTTAAGGCTGAGGAAGAAGAAAGCACAGAAGAAAAGCAGGGACAACATGGTTGAAAAGCCAGGAGCTTTAGCCATTTATGCACAAGTTACACGTTGAAGAAGATGAAAGTGCAAGAAGAAAAAGTAGAAGAAAAAGTAGAAGAAAAGAAGGTGGTGGTGA

mRNA sequence

CTAGAGAGACATTGATTTGAAAGTTTAAAAAAAAAACCATGTTTGTTCCAAATTCAAGCATGGTGTTCGGGGTCAGGTCCACCCGGGACGATCCTCTCAGAACCGACGAGAGATCGTTGGGTACGGTGAGGGTGGATGTTGTGGAGGTGAAAGGCCAACAATTCATGAAGAAGAAGTTGGTTTGTTTGTGGTGGAATTATTTGTGCTGCAATGAGATGGTTTTTTTGCAGAACTCTGGCCTGAGTGGAGTTAAGGCTGAGGAAGAAGAAAGCACAGAAGAAAAGCAGGGACAACATGGTTGAAAAGCCAGGAGCTTTAGCCATTTATGCACAAGTTACACGTTGAAGAAGATGAAAGTGCAAGAAGAAAAAGTAGAAGAAAAAGTAGAAGAAAAGAAGGTGGTGGTGA

Coding sequence (CDS)

ATGTTTGTTCCAAATTCAAGCATGGTGTTCGGGGTCAGGTCCACCCGGGACGATCCTCTCAGAACCGACGAGAGATCGTTGGGTACGGTGAGGGTGGATGTTGTGGAGGTGAAAGGCCAACAATTCATGAAGAAGAAGTTGGTTTGTTTGTGGTGGAATTATTTGTGCTGCAATGAGATGGTTTTTTTGCAGAACTCTGGCCTGAGTGGAGTTAAGGCTGAGGAAGAAGAAAGCACAGAAGAAAAGCAGGGACAACATGGTTGA

Protein sequence

MFVPNSSMVFGVRSTRDDPLRTDERSLGTVRVDVVEVKGQQFMKKKLVCLWWNYLCCNEMVFLQNSGLSGVKAEEEESTEEKQGQHG
Homology
BLAST of Cmc11g0301701 vs. NCBI nr
Match: TYK14597.1 (hypothetical protein E5676_scaffold552G001000 [Cucumis melo var. makuwa])

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-17
Identity = 58/87 (66.67%), Postives = 59/87 (67.82%), Query Frame = 0

Query: 1  MFVPNSSMVFGVRSTRDDPLRTDERSLGTVRVDVVEVKGQQFMKKKLVCLWWNYLCCNEM 60
          MFVPNSSMVFGVRSTRD+PLRTDERSLGTVRVDVVE                        
Sbjct: 1  MFVPNSSMVFGVRSTRDNPLRTDERSLGTVRVDVVE------------------------ 59

Query: 61 VFLQNSGLSGVKAEEEESTEEKQGQHG 88
              NSGLSGVKAEEEESTEEKQGQHG
Sbjct: 61 ----NSGLSGVKAEEEESTEEKQGQHG 59

BLAST of Cmc11g0301701 vs. ExPASy TrEMBL
Match: A0A5D3CRR2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G001000 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.1e-18
Identity = 58/87 (66.67%), Postives = 59/87 (67.82%), Query Frame = 0

Query: 1  MFVPNSSMVFGVRSTRDDPLRTDERSLGTVRVDVVEVKGQQFMKKKLVCLWWNYLCCNEM 60
          MFVPNSSMVFGVRSTRD+PLRTDERSLGTVRVDVVE                        
Sbjct: 1  MFVPNSSMVFGVRSTRDNPLRTDERSLGTVRVDVVE------------------------ 59

Query: 61 VFLQNSGLSGVKAEEEESTEEKQGQHG 88
              NSGLSGVKAEEEESTEEKQGQHG
Sbjct: 61 ----NSGLSGVKAEEEESTEEKQGQHG 59

BLAST of Cmc11g0301701 vs. ExPASy TrEMBL
Match: A0A0A0KHI9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G235540 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 8.6e-12
Identity = 51/87 (58.62%), Postives = 52/87 (59.77%), Query Frame = 0

Query: 1  MFVPNSSMVFGVRSTRDDPLRTDERSLGTVRVDVVEVKGQQFMKKKLVCLWWNYLCCNEM 60
          MFVPNSSMVFGVRST DDPLR DERSLG V VDVVE                        
Sbjct: 1  MFVPNSSMVFGVRSTGDDPLRADERSLGPV-VDVVE------------------------ 58

Query: 61 VFLQNSGLSGVKAEEEESTEEKQGQHG 88
              NSGLSGV  +EEESTEEKQ QHG
Sbjct: 61 ----NSGLSGVMDKEEESTEEKQEQHG 58

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK14597.11.3e-1766.67hypothetical protein E5676_scaffold552G001000 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CRR26.1e-1866.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KHI98.6e-1258.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G235540 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0301701.1Cmc11g0301701.1mRNA