Homology
BLAST of Cmc11g0301281 vs. NCBI nr
Match:
KAA0037650.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK22795.1 gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 492.3 bits (1266), Expect = 2.7e-135
Identity = 247/272 (90.81%), Postives = 259/272 (95.22%), Query Frame = 0
Query: 1 METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMSKGDSQPDSAKTDSNITDEVI 60
METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEM KG+SQ DSAKTDS+ITDEVI
Sbjct: 1 METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGESQLDSAKTDSSITDEVI 60
Query: 61 NNETVLVPSAHVKKNHPSSFIIGDPSAGITTRRKEKVDYMKLIADLCYVSAIEPTSVENA 120
NNETVLVPSA+VKKNHPSS IIGDPSAGITT+RKEKVDY K+IADLCYVSAIEPTSVENA
Sbjct: 61 NNETVLVPSAYVKKNHPSSSIIGDPSAGITTKRKEKVDYTKMIADLCYVSAIEPTSVENA 120
Query: 121 LKDEYWINAMQEELLQFKRNNVWTLVPKPNGANVIGTKWIFKNKTDEYGSVIRNKARLVA 180
KDEYWINAMQEELLQFKRNNVWT+VPKP+GANVIGTKWIFKNKTDE GS+IRNKARL+A
Sbjct: 121 FKDEYWINAMQEELLQFKRNNVWTMVPKPDGANVIGTKWIFKNKTDESGSIIRNKARLIA 180
Query: 181 QDYAQVEGVDFDETFAPVARLKAICLLLCISCFQKFKLFQMDVKSTFLNGYLNEEVYEAQ 240
Q YAQVEGVDFDETFA VARL+AI LLL ISCF+KFKLF+MDVKS FLNGYLNEEVY AQ
Sbjct: 181 QGYAQVEGVDFDETFALVARLEAIRLLLSISCFRKFKLFRMDVKSAFLNGYLNEEVYVAQ 240
Query: 241 PKGFVDSEFPQYVYKLNKALYGLKQAPRALYE 273
PKGFVDSEFPQYVYKLNKALYGLKQAPRA YE
Sbjct: 241 PKGFVDSEFPQYVYKLNKALYGLKQAPRAWYE 272
BLAST of Cmc11g0301281 vs. NCBI nr
Match:
TYK21443.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 453.4 bits (1165), Expect = 1.4e-123
Identity = 234/288 (81.25%), Postives = 247/288 (85.76%), Query Frame = 0
Query: 1 METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMSKGDSQPDSAKTDSNITDEVI 60
METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEM KG+SQ SAKTDS+ITDEVI
Sbjct: 695 METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGESQLHSAKTDSSITDEVI 754
Query: 61 NNETVLVPSAHVKKNHPSSFIIGDPSAGITTRRKEKVDYMKLIA---------------- 120
NNET+LVPSAHVKKNHPSS II DPSAGITTRRKE ++ I+
Sbjct: 755 NNETMLVPSAHVKKNHPSSSIISDPSAGITTRRKEMLNIAGPISLPFQGKRKFWIKEEVQ 814
Query: 121 ---DLCYVSAIEPTSVENALKDEYWINAMQEELLQFKRNNVWTLVPKPNGANVIGTKWIF 180
DLCYVSAIEPTSVEN+LKDEYWI MQEE LQFKRNNVWTLVPKP+GAN+IGTKWIF
Sbjct: 815 NYKDLCYVSAIEPTSVENSLKDEYWIKVMQEEFLQFKRNNVWTLVPKPDGANIIGTKWIF 874
Query: 181 KNKTDEYGSVIRNKARLVAQDYAQVEGVDFDETFAPVARLKAICLLLCISCFQKFKLFQM 240
KNKTDE GS+IRNKARLVAQ Y QVEGVD DETFAPVARL+AI LLL ISCFQKFKLFQM
Sbjct: 875 KNKTDESGSIIRNKARLVAQGYTQVEGVDCDETFAPVARLEAIRLLLSISCFQKFKLFQM 934
Query: 241 DVKSTFLNGYLNEEVYEAQPKGFVDSEFPQYVYKLNKALYGLKQAPRA 270
DVKS FLNGYLNEEV A+PKGF+DSEFPQYVYKLNKALYGLKQAPRA
Sbjct: 935 DVKSAFLNGYLNEEVNVAEPKGFIDSEFPQYVYKLNKALYGLKQAPRA 982
BLAST of Cmc11g0301281 vs. NCBI nr
Match:
KAA0067336.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK08980.1 gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 449.5 bits (1155), Expect = 2.0e-122
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0
Query: 25 THVTPEVTSTPLDEMSKGDSQPDSAKTDSNITDEVINNETVLVPSAHVKKNHPSSFIIGD 84
THVTPEVTSTPLDEMSKGDSQPDSAKTDSNITDEVINNETVLVPSAHVKKNHPSSFIIGD
Sbjct: 307 THVTPEVTSTPLDEMSKGDSQPDSAKTDSNITDEVINNETVLVPSAHVKKNHPSSFIIGD 366
Query: 85 PSAGITTRRKEKVDYMKLIADLCYVSAIEPTSVENALKDEYWINAMQEELLQFKRNNVWT 144
PSAGITTRRKEKVDYMKLIADLCYVSAIEPTSVENALKDEYWINAMQEELLQFKRNNVWT
Sbjct: 367 PSAGITTRRKEKVDYMKLIADLCYVSAIEPTSVENALKDEYWINAMQEELLQFKRNNVWT 426
Query: 145 LVPKPNGANVIGTKWIFKNKTDEYGSVIRNKARLVAQDYAQVEGVDFDETFAPVARLKAI 204
LVPKPNGANVIGTKWIFKNKTDEYGSVIRNKARLVAQDYAQVEGVDFDETFAPVARLKAI
Sbjct: 427 LVPKPNGANVIGTKWIFKNKTDEYGSVIRNKARLVAQDYAQVEGVDFDETFAPVARLKAI 486
Query: 205 CLLLCISCFQKFKLFQMDVKSTFLNGYLNEEVYEAQPKGFVDS 248
CLLLCISCFQKF LFQMDVKSTFLNGYLNEEVYEAQPKGFVDS
Sbjct: 487 CLLLCISCFQKFNLFQMDVKSTFLNGYLNEEVYEAQPKGFVDS 529
BLAST of Cmc11g0301281 vs. NCBI nr
Match:
KAA0051798.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 443.4 bits (1139), Expect = 1.5e-120
Identity = 234/315 (74.29%), Postives = 247/315 (78.41%), Query Frame = 0
Query: 1 METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMSKGDSQPDSAKTDSNITDEVI 60
METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEM KG+SQ SAKTDS+ITDEVI
Sbjct: 695 METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGESQLHSAKTDSSITDEVI 754
Query: 61 NNETVLVPSAHVKKNHPSSFIIGDPSAGITTRRKEKV----------------------- 120
NNET+LVPSAHVKKNHPSS II DPSAGITTRRKE V
Sbjct: 755 NNETMLVPSAHVKKNHPSSSIISDPSAGITTRRKEMVRAAQHRWPDKPPISGSHNSVLGP 814
Query: 121 -----------------------DYMKLIADLCYVSAIEPTSVENALKDEYWINAMQEEL 180
+ ++ DLCYVSAIEPTSVEN+LKDEYWI MQEE
Sbjct: 815 KYSRSAWWLSLLVIFRKRKFWIKEEVQNYKDLCYVSAIEPTSVENSLKDEYWIKVMQEEF 874
Query: 181 LQFKRNNVWTLVPKPNGANVIGTKWIFKNKTDEYGSVIRNKARLVAQDYAQVEGVDFDET 240
LQFKRNNVWTLVPKP+GAN+IGTKWIFKNKTDE GS+IRNKARLVAQ Y QVEGVD DET
Sbjct: 875 LQFKRNNVWTLVPKPDGANIIGTKWIFKNKTDESGSIIRNKARLVAQGYTQVEGVDCDET 934
Query: 241 FAPVARLKAICLLLCISCFQKFKLFQMDVKSTFLNGYLNEEVYEAQPKGFVDSEFPQYVY 270
FAPVARL+AI LLL ISCFQKFKLFQMDVKS FLNGYLNEEV A+PKGF+DSEFPQYVY
Sbjct: 935 FAPVARLEAIRLLLSISCFQKFKLFQMDVKSAFLNGYLNEEVNVAEPKGFIDSEFPQYVY 994
BLAST of Cmc11g0301281 vs. NCBI nr
Match:
KAA0060315.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK22065.1 gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 430.6 bits (1106), Expect = 9.8e-117
Identity = 223/273 (81.68%), Postives = 239/273 (87.55%), Query Frame = 0
Query: 1 METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMSKGDSQPDSAKTD-SNITDEV 60
METINVVVNDFESN NQFNIEDDET V +V +TPL EM K DSQPDS KT+ ITDE
Sbjct: 265 METINVVVNDFESNDNQFNIEDDETFVMTDVIATPLKEMPKADSQPDSTKTNLEKITDET 324
Query: 61 INNETVLVPSAHVKKNHPSSFIIGDPSAGITTRRKEKVDYMKLIADLCYVSAIEPTSVEN 120
+N+ETVLVPSAHVKKNHP S IIGD SAGITTRRKEKVDY K+IADLCYVS IEPTSVEN
Sbjct: 325 LNDETVLVPSAHVKKNHPLSSIIGDTSAGITTRRKEKVDYSKMIADLCYVSVIEPTSVEN 384
Query: 121 ALKDEYWINAMQEELLQFKRNNVWTLVPKPNGANVIGTKWIFKNKTDEYGSVIRNKARLV 180
ALK+EYWINAMQEELLQFKRN+VWTLVPKP+ NVIGTKWIFKNKTDE +V +NKARLV
Sbjct: 385 ALKNEYWINAMQEELLQFKRNSVWTLVPKPDRVNVIGTKWIFKNKTDESRNVTKNKARLV 444
Query: 181 AQDYAQVEGVDFDETFAPVARLKAICLLLCISCFQKFKLFQMDVKSTFLNGYLNEEVYEA 240
AQ YAQVEGVDFDETFAPVA+L+AI LLL FQKFK++QMDVKS FLNGYLNEEVY A
Sbjct: 445 AQGYAQVEGVDFDETFAPVAKLEAIRLLLIY--FQKFKMYQMDVKSAFLNGYLNEEVYVA 504
Query: 241 QPKGFVDSEFPQYVYKLNKALYGLKQAPRALYE 273
QPK F+DSEFPQYVYKLNKALYGLKQA RA YE
Sbjct: 505 QPKRFIDSEFPQYVYKLNKALYGLKQALRAWYE 535
BLAST of Cmc11g0301281 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 143.3 bits (360), Expect = 4.1e-33
Identity = 89/265 (33.58%), Postives = 143/265 (53.96%), Query Frame = 0
Query: 12 ESNVNQFNIEDDETHVTPEVTSTPLDEMSKGDSQPDSAKTDSNITDEVINNETVLV---- 71
+++ +Q +++ T+ +P + L ++ S S T ++ + ++L+
Sbjct: 851 QTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPP 910
Query: 72 PSAHVKKNHPSSFIIGDPSAGITTRRKEKVDYMKLIADLCYVSAIEPTSVENALKDEYWI 131
P A + N+ + + S G + K + + EP + ALKDE W
Sbjct: 911 PLAQIVNNN-NQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWR 970
Query: 132 NAMQEELLQFKRNNVWTLV-PKPNGANVIGTKWIFKNKTDEYGSVIRNKARLVAQDYAQV 191
NAM E+ N+ W LV P P+ ++G +WIF K + GS+ R KARLVA+ Y Q
Sbjct: 971 NAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQR 1030
Query: 192 EGVDFDETFAPVARLKAICLLLCISCFQKFKLFQMDVKSTFLNGYLNEEVYEAQPKGFVD 251
G+D+ ETF+PV + +I ++L ++ + + + Q+DV + FL G L ++VY +QP GF+D
Sbjct: 1031 PGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFID 1090
Query: 252 SEFPQYVYKLNKALYGLKQAPRALY 272
+ P YV KL KALYGLKQAPRA Y
Sbjct: 1091 KDRPNYVCKLRKALYGLKQAPRAWY 1114
BLAST of Cmc11g0301281 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 141.7 bits (356), Expect = 1.2e-32
Identity = 72/160 (45.00%), Postives = 102/160 (63.75%), Query Frame = 0
Query: 113 EPTSVENALKDEYWINAMQEELLQFKRNNVWTLV-PKPNGANVIGTKWIFKNKTDEYGSV 172
EP + A+KD+ W AM E+ N+ W LV P P ++G +WIF K + GS+
Sbjct: 938 EPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSL 997
Query: 173 IRNKARLVAQDYAQVEGVDFDETFAPVARLKAICLLLCISCFQKFKLFQMDVKSTFLNGY 232
R KARLVA+ Y Q G+D+ ETF+PV + +I ++L ++ + + + Q+DV + FL G
Sbjct: 998 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGT 1057
Query: 233 LNEEVYEAQPKGFVDSEFPQYVYKLNKALYGLKQAPRALY 272
L +EVY +QP GFVD + P YV +L KA+YGLKQAPRA Y
Sbjct: 1058 LTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWY 1097
BLAST of Cmc11g0301281 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 131.0 bits (328), Expect = 2.1e-29
Identity = 84/250 (33.60%), Postives = 130/250 (52.00%), Query Frame = 0
Query: 25 THVTPEVTSTPLDEMSKGDSQPDSAKTDSNITDEVINNETVLVPSAHVKKNHPSSFIIGD 84
T P + DE+S+ QP DE + E V P+ +++ P +
Sbjct: 733 TSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGV--EEVEHPTQGEEQHQP---LRRS 792
Query: 85 PSAGITTRRKEKVDYMKLIADLCYVSAIEPTSVENAL---KDEYWINAMQEELLQFKRNN 144
+ +RR +Y+ + D EP S++ L + + AMQEE+ ++N
Sbjct: 793 ERPRVESRRYPSTEYVLISDDR------EPESLKEVLSHPEKNQLMKAMQEEMESLQKNG 852
Query: 145 VWTLVPKPNGANVIGTKWIFKNKTDEYGSVIRNKARLVAQDYAQVEGVDFDETFAPVARL 204
+ LV P G + KW+FK K D ++R KARLV + + Q +G+DFDE F+PV ++
Sbjct: 853 TYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKM 912
Query: 205 KAICLLLCISCFQKFKLFQMDVKSTFLNGYLNEEVYEAQPKGFVDSEFPQYVYKLNKALY 264
+I +L ++ ++ Q+DVK+ FL+G L EE+Y QP+GF + V KLNK+LY
Sbjct: 913 TSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLY 971
Query: 265 GLKQAPRALY 272
GLKQAPR Y
Sbjct: 973 GLKQAPRQWY 971
BLAST of Cmc11g0301281 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 129.4 bits (324), Expect = 6.1e-29
Identity = 66/147 (44.90%), Postives = 91/147 (61.90%), Query Frame = 0
Query: 126 WINAMQEELLQFKRNNVWTLVPKPNGANVIGTKWIFKNKTDEYGSVIRNKARLVAQDYAQ 185
W A+ EL K NN WT+ +P N++ ++W+F K +E G+ IR KARLVA+ + Q
Sbjct: 906 WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965
Query: 186 VEGVDFDETFAPVARLKAICLLLCISCFQKFKLFQMDVKSTFLNGYLNEEVYEAQPKGFV 245
+D++ETFAPVAR+ + +L + K+ QMDVK+ FLNG L EE+Y P+G
Sbjct: 966 KYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI- 1025
Query: 246 DSEFPQYVYKLNKALYGLKQAPRALYE 273
S V KLNKA+YGLKQA R +E
Sbjct: 1026 -SCNSDNVCKLNKAIYGLKQAARCWFE 1050
BLAST of Cmc11g0301281 vs. ExPASy Swiss-Prot
Match:
P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)
HSP 1 Score: 95.9 bits (237), Expect = 7.5e-19
Identity = 53/123 (43.09%), Postives = 70/123 (56.91%), Query Frame = 0
Query: 91 TRRKEKVDYMKLIADLCYVSAI--EPTSVENALKDEYWINAMQEELLQFKRNNVWTLVPK 150
TR K ++ + L + I EP SV ALKD W AMQEEL RN W LVP
Sbjct: 3 TRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPP 62
Query: 151 PNGANVIGTKWIFKNKTDEYGSVIRNKARLVAQDYAQVEGVDFDETFAPVARLKAICLLL 210
P N++G KW+FK K G++ R KARLVA+ + Q EG+ F ET++PV R I +L
Sbjct: 63 PVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTIL 122
Query: 211 CIS 212
++
Sbjct: 123 NVA 125
BLAST of Cmc11g0301281 vs. ExPASy TrEMBL
Match:
A0A5A7T2Q0 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00330 PE=4 SV=1)
HSP 1 Score: 492.3 bits (1266), Expect = 1.3e-135
Identity = 247/272 (90.81%), Postives = 259/272 (95.22%), Query Frame = 0
Query: 1 METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMSKGDSQPDSAKTDSNITDEVI 60
METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEM KG+SQ DSAKTDS+ITDEVI
Sbjct: 1 METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGESQLDSAKTDSSITDEVI 60
Query: 61 NNETVLVPSAHVKKNHPSSFIIGDPSAGITTRRKEKVDYMKLIADLCYVSAIEPTSVENA 120
NNETVLVPSA+VKKNHPSS IIGDPSAGITT+RKEKVDY K+IADLCYVSAIEPTSVENA
Sbjct: 61 NNETVLVPSAYVKKNHPSSSIIGDPSAGITTKRKEKVDYTKMIADLCYVSAIEPTSVENA 120
Query: 121 LKDEYWINAMQEELLQFKRNNVWTLVPKPNGANVIGTKWIFKNKTDEYGSVIRNKARLVA 180
KDEYWINAMQEELLQFKRNNVWT+VPKP+GANVIGTKWIFKNKTDE GS+IRNKARL+A
Sbjct: 121 FKDEYWINAMQEELLQFKRNNVWTMVPKPDGANVIGTKWIFKNKTDESGSIIRNKARLIA 180
Query: 181 QDYAQVEGVDFDETFAPVARLKAICLLLCISCFQKFKLFQMDVKSTFLNGYLNEEVYEAQ 240
Q YAQVEGVDFDETFA VARL+AI LLL ISCF+KFKLF+MDVKS FLNGYLNEEVY AQ
Sbjct: 181 QGYAQVEGVDFDETFALVARLEAIRLLLSISCFRKFKLFRMDVKSAFLNGYLNEEVYVAQ 240
Query: 241 PKGFVDSEFPQYVYKLNKALYGLKQAPRALYE 273
PKGFVDSEFPQYVYKLNKALYGLKQAPRA YE
Sbjct: 241 PKGFVDSEFPQYVYKLNKALYGLKQAPRAWYE 272
BLAST of Cmc11g0301281 vs. ExPASy TrEMBL
Match:
A0A5D3DCZ8 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G001130 PE=4 SV=1)
HSP 1 Score: 453.4 bits (1165), Expect = 6.8e-124
Identity = 234/288 (81.25%), Postives = 247/288 (85.76%), Query Frame = 0
Query: 1 METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMSKGDSQPDSAKTDSNITDEVI 60
METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEM KG+SQ SAKTDS+ITDEVI
Sbjct: 695 METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGESQLHSAKTDSSITDEVI 754
Query: 61 NNETVLVPSAHVKKNHPSSFIIGDPSAGITTRRKEKVDYMKLIA---------------- 120
NNET+LVPSAHVKKNHPSS II DPSAGITTRRKE ++ I+
Sbjct: 755 NNETMLVPSAHVKKNHPSSSIISDPSAGITTRRKEMLNIAGPISLPFQGKRKFWIKEEVQ 814
Query: 121 ---DLCYVSAIEPTSVENALKDEYWINAMQEELLQFKRNNVWTLVPKPNGANVIGTKWIF 180
DLCYVSAIEPTSVEN+LKDEYWI MQEE LQFKRNNVWTLVPKP+GAN+IGTKWIF
Sbjct: 815 NYKDLCYVSAIEPTSVENSLKDEYWIKVMQEEFLQFKRNNVWTLVPKPDGANIIGTKWIF 874
Query: 181 KNKTDEYGSVIRNKARLVAQDYAQVEGVDFDETFAPVARLKAICLLLCISCFQKFKLFQM 240
KNKTDE GS+IRNKARLVAQ Y QVEGVD DETFAPVARL+AI LLL ISCFQKFKLFQM
Sbjct: 875 KNKTDESGSIIRNKARLVAQGYTQVEGVDCDETFAPVARLEAIRLLLSISCFQKFKLFQM 934
Query: 241 DVKSTFLNGYLNEEVYEAQPKGFVDSEFPQYVYKLNKALYGLKQAPRA 270
DVKS FLNGYLNEEV A+PKGF+DSEFPQYVYKLNKALYGLKQAPRA
Sbjct: 935 DVKSAFLNGYLNEEVNVAEPKGFIDSEFPQYVYKLNKALYGLKQAPRA 982
BLAST of Cmc11g0301281 vs. ExPASy TrEMBL
Match:
A0A5A7VLJ5 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold615G00030 PE=4 SV=1)
HSP 1 Score: 449.5 bits (1155), Expect = 9.9e-123
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0
Query: 25 THVTPEVTSTPLDEMSKGDSQPDSAKTDSNITDEVINNETVLVPSAHVKKNHPSSFIIGD 84
THVTPEVTSTPLDEMSKGDSQPDSAKTDSNITDEVINNETVLVPSAHVKKNHPSSFIIGD
Sbjct: 307 THVTPEVTSTPLDEMSKGDSQPDSAKTDSNITDEVINNETVLVPSAHVKKNHPSSFIIGD 366
Query: 85 PSAGITTRRKEKVDYMKLIADLCYVSAIEPTSVENALKDEYWINAMQEELLQFKRNNVWT 144
PSAGITTRRKEKVDYMKLIADLCYVSAIEPTSVENALKDEYWINAMQEELLQFKRNNVWT
Sbjct: 367 PSAGITTRRKEKVDYMKLIADLCYVSAIEPTSVENALKDEYWINAMQEELLQFKRNNVWT 426
Query: 145 LVPKPNGANVIGTKWIFKNKTDEYGSVIRNKARLVAQDYAQVEGVDFDETFAPVARLKAI 204
LVPKPNGANVIGTKWIFKNKTDEYGSVIRNKARLVAQDYAQVEGVDFDETFAPVARLKAI
Sbjct: 427 LVPKPNGANVIGTKWIFKNKTDEYGSVIRNKARLVAQDYAQVEGVDFDETFAPVARLKAI 486
Query: 205 CLLLCISCFQKFKLFQMDVKSTFLNGYLNEEVYEAQPKGFVDS 248
CLLLCISCFQKF LFQMDVKSTFLNGYLNEEVYEAQPKGFVDS
Sbjct: 487 CLLLCISCFQKFNLFQMDVKSTFLNGYLNEEVYEAQPKGFVDS 529
BLAST of Cmc11g0301281 vs. ExPASy TrEMBL
Match:
A0A5A7U931 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G002070 PE=4 SV=1)
HSP 1 Score: 443.4 bits (1139), Expect = 7.1e-121
Identity = 234/315 (74.29%), Postives = 247/315 (78.41%), Query Frame = 0
Query: 1 METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMSKGDSQPDSAKTDSNITDEVI 60
METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEM KG+SQ SAKTDS+ITDEVI
Sbjct: 695 METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMPKGESQLHSAKTDSSITDEVI 754
Query: 61 NNETVLVPSAHVKKNHPSSFIIGDPSAGITTRRKEKV----------------------- 120
NNET+LVPSAHVKKNHPSS II DPSAGITTRRKE V
Sbjct: 755 NNETMLVPSAHVKKNHPSSSIISDPSAGITTRRKEMVRAAQHRWPDKPPISGSHNSVLGP 814
Query: 121 -----------------------DYMKLIADLCYVSAIEPTSVENALKDEYWINAMQEEL 180
+ ++ DLCYVSAIEPTSVEN+LKDEYWI MQEE
Sbjct: 815 KYSRSAWWLSLLVIFRKRKFWIKEEVQNYKDLCYVSAIEPTSVENSLKDEYWIKVMQEEF 874
Query: 181 LQFKRNNVWTLVPKPNGANVIGTKWIFKNKTDEYGSVIRNKARLVAQDYAQVEGVDFDET 240
LQFKRNNVWTLVPKP+GAN+IGTKWIFKNKTDE GS+IRNKARLVAQ Y QVEGVD DET
Sbjct: 875 LQFKRNNVWTLVPKPDGANIIGTKWIFKNKTDESGSIIRNKARLVAQGYTQVEGVDCDET 934
Query: 241 FAPVARLKAICLLLCISCFQKFKLFQMDVKSTFLNGYLNEEVYEAQPKGFVDSEFPQYVY 270
FAPVARL+AI LLL ISCFQKFKLFQMDVKS FLNGYLNEEV A+PKGF+DSEFPQYVY
Sbjct: 935 FAPVARLEAIRLLLSISCFQKFKLFQMDVKSAFLNGYLNEEVNVAEPKGFIDSEFPQYVY 994
BLAST of Cmc11g0301281 vs. ExPASy TrEMBL
Match:
A0A5A7V365 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00460 PE=4 SV=1)
HSP 1 Score: 430.6 bits (1106), Expect = 4.7e-117
Identity = 223/273 (81.68%), Postives = 239/273 (87.55%), Query Frame = 0
Query: 1 METINVVVNDFESNVNQFNIEDDETHVTPEVTSTPLDEMSKGDSQPDSAKTD-SNITDEV 60
METINVVVNDFESN NQFNIEDDET V +V +TPL EM K DSQPDS KT+ ITDE
Sbjct: 265 METINVVVNDFESNDNQFNIEDDETFVMTDVIATPLKEMPKADSQPDSTKTNLEKITDET 324
Query: 61 INNETVLVPSAHVKKNHPSSFIIGDPSAGITTRRKEKVDYMKLIADLCYVSAIEPTSVEN 120
+N+ETVLVPSAHVKKNHP S IIGD SAGITTRRKEKVDY K+IADLCYVS IEPTSVEN
Sbjct: 325 LNDETVLVPSAHVKKNHPLSSIIGDTSAGITTRRKEKVDYSKMIADLCYVSVIEPTSVEN 384
Query: 121 ALKDEYWINAMQEELLQFKRNNVWTLVPKPNGANVIGTKWIFKNKTDEYGSVIRNKARLV 180
ALK+EYWINAMQEELLQFKRN+VWTLVPKP+ NVIGTKWIFKNKTDE +V +NKARLV
Sbjct: 385 ALKNEYWINAMQEELLQFKRNSVWTLVPKPDRVNVIGTKWIFKNKTDESRNVTKNKARLV 444
Query: 181 AQDYAQVEGVDFDETFAPVARLKAICLLLCISCFQKFKLFQMDVKSTFLNGYLNEEVYEA 240
AQ YAQVEGVDFDETFAPVA+L+AI LLL FQKFK++QMDVKS FLNGYLNEEVY A
Sbjct: 445 AQGYAQVEGVDFDETFAPVAKLEAIRLLLIY--FQKFKMYQMDVKSAFLNGYLNEEVYVA 504
Query: 241 QPKGFVDSEFPQYVYKLNKALYGLKQAPRALYE 273
QPK F+DSEFPQYVYKLNKALYGLKQA RA YE
Sbjct: 505 QPKRFIDSEFPQYVYKLNKALYGLKQALRAWYE 535
BLAST of Cmc11g0301281 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 131.7 bits (330), Expect = 8.8e-31
Identity = 68/167 (40.72%), Postives = 97/167 (58.08%), Query Frame = 0
Query: 106 LCYVSAIEPTSVENALKDEYWINAMQEELLQFKRNNVWTLVPKPNGANVIGTKWIFKNKT 165
+C A EP++ A + W AM +E+ + + W + P IG KW++K K
Sbjct: 78 VCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKY 137
Query: 166 DEYGSVIRNKARLVAQDYAQVEGVDFDETFAPVARLKAICLLLCISCFQKFKLFQMDVKS 225
+ G++ R KARLVA+ Y Q EG+DF ETF+PV +L ++ L+L IS F L Q+D+ +
Sbjct: 138 NSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISN 197
Query: 226 TFLNGYLNEEVYEAQPKGFV----DSEFPQYVYKLNKALYGLKQAPR 269
FLNG L+EE+Y P G+ DS P V L K++YGLKQA R
Sbjct: 198 AFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASR 244
BLAST of Cmc11g0301281 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 95.9 bits (237), Expect = 5.3e-20
Identity = 53/123 (43.09%), Postives = 70/123 (56.91%), Query Frame = 0
Query: 91 TRRKEKVDYMKLIADLCYVSAI--EPTSVENALKDEYWINAMQEELLQFKRNNVWTLVPK 150
TR K ++ + L + I EP SV ALKD W AMQEEL RN W LVP
Sbjct: 3 TRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPP 62
Query: 151 PNGANVIGTKWIFKNKTDEYGSVIRNKARLVAQDYAQVEGVDFDETFAPVARLKAICLLL 210
P N++G KW+FK K G++ R KARLVA+ + Q EG+ F ET++PV R I +L
Sbjct: 63 PVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTIL 122
Query: 211 CIS 212
++
Sbjct: 123 NVA 125
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0037650.1 | 2.7e-135 | 90.81 | gag-pol polyprotein [Cucumis melo var. makuwa] >TYK22795.1 gag-pol polyprotein [... | [more] |
TYK21443.1 | 1.4e-123 | 81.25 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0067336.1 | 2.0e-122 | 99.55 | gag-pol polyprotein [Cucumis melo var. makuwa] >TYK08980.1 gag-pol polyprotein [... | [more] |
KAA0051798.1 | 1.5e-120 | 74.29 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0060315.1 | 9.8e-117 | 81.68 | gag-pol polyprotein [Cucumis melo var. makuwa] >TYK22065.1 gag-pol polyprotein [... | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 4.1e-33 | 33.58 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.2e-32 | 45.00 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P10978 | 2.1e-29 | 33.60 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 6.1e-29 | 44.90 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
P92520 | 7.5e-19 | 43.09 | Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7T2Q0 | 1.3e-135 | 90.81 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G... | [more] |
A0A5D3DCZ8 | 6.8e-124 | 81.25 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G... | [more] |
A0A5A7VLJ5 | 9.9e-123 | 99.55 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold615G... | [more] |
A0A5A7U931 | 7.1e-121 | 74.29 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G0... | [more] |
A0A5A7V365 | 4.7e-117 | 81.68 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 8.8e-31 | 40.72 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00820.1 | 5.3e-20 | 43.09 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |