Cmc11g0301011 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0301011
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 21270477 .. 21270782 (+)
RNA-Seq Expression	Cmc11g0301011
Synteny	Cmc11g0301011

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTTTGATTTGACTAATGCTCCCGCAGTATTCATGGACTTGATGACCAGAGTGTTTAAGGACTTCTTAGACAAGTTTGTTATAGTTTTCATTGACGATATCTTGGTTTACTCCAAGATAGAGGTCGAGCATGAGGATCACTTGCATCAAGTTTTGGGGACTCTTGGAGCTAATAAGTTGTATGCCAAGCTTTTCAAGTGTGAGTTCTGGTTGAAGAAGGTATCTTTTCTTGGACATGTGGTGTCCAGTGACGGAGTTTCTCTAGACCCAGCAAAGATTGAAGCTGTTACTAGTTGGCCTTGA

mRNA sequence

ATGTCCTTTGATTTGACTAATGCTCCCGCAGTATTCATGGACTTGATGACCAGAGTGTTTAAGGACTTCTTAGACAAGTTTGTTATAGTTTTCATTGACGATATCTTGGTTTACTCCAAGATAGAGGTCGAGCATGAGGATCACTTGCATCAAGTTTTGGGGACTCTTGGAGCTAATAAGTTGTATGCCAAGCTTTTCAAGTGTGAGTTCTGGTTGAAGAAGGTATCTTTTCTTGGACATGTGGTGTCCAGTGACGGAGTTTCTCTAGACCCAGCAAAGATTGAAGCTGTTACTAGTTGGCCTTGA

Coding sequence (CDS)

ATGTCCTTTGATTTGACTAATGCTCCCGCAGTATTCATGGACTTGATGACCAGAGTGTTTAAGGACTTCTTAGACAAGTTTGTTATAGTTTTCATTGACGATATCTTGGTTTACTCCAAGATAGAGGTCGAGCATGAGGATCACTTGCATCAAGTTTTGGGGACTCTTGGAGCTAATAAGTTGTATGCCAAGCTTTTCAAGTGTGAGTTCTGGTTGAAGAAGGTATCTTTTCTTGGACATGTGGTGTCCAGTGACGGAGTTTCTCTAGACCCAGCAAAGATTGAAGCTGTTACTAGTTGGCCTTGA

Protein sequence

MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANKLYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAVTSWP

Homology

[Close]

BLAST of Cmc11g0301011 vs. NCBI nr
Match: KAA0061789.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 92/101 (91.09%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANK 60
           MSFDLTNAPAVFMDLM +VFKDFLD+FVIVFIDDILVYSKIEVE+EDHLHQVLGTL ANK
Sbjct: 474 MSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANK 533

Query: 61  LYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAVTSWP 102
           LYAK FKCEFWLKKVSFLGHVVSS GVS+DPAKIE VTSWP
Sbjct: 534 LYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTSWP 574

[Close]

BLAST of Cmc11g0301011 vs. NCBI nr
Match: KAA0061810.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 186.8 bits (473), Expect = 9.1e-44
Identity = 90/101 (89.11%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANK 60
           MSFDLTNAPAVFMDLM +VFKDFLD+FVIVFIDDILVYSKIEVE+EDHLHQVLGTL ANK
Sbjct: 260 MSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANK 319

Query: 61  LYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAVTSWP 102
           LYAK FKCEFWLKKVSFLGHVVSS GVS+DP+KI+ VTSWP
Sbjct: 320 LYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPSKIKVVTSWP 360

[Close]

BLAST of Cmc11g0301011 vs. NCBI nr
Match: KAA0035443.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK31081.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 182.6 bits (462), Expect = 1.7e-42
Identity = 89/101 (88.12%), Postives = 93/101 (92.08%), Query Frame = 0


Query: 1   MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANK 60
           MSF LTNAPAVFMDLM RVFKDFLD FVIVFIDDILVYSK EVEHEDHLHQVLGTL ANK
Sbjct: 395 MSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILVYSKTEVEHEDHLHQVLGTLRANK 454

Query: 61  LYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAVTSWP 102
           LYAK  KCEFWLKKVSFLGHV+ S+GVS+DPAKIEA+TSWP
Sbjct: 455 LYAKFSKCEFWLKKVSFLGHVMFSEGVSVDPAKIEAITSWP 495

[Close]

BLAST of Cmc11g0301011 vs. NCBI nr
Match: KAA0048739.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK31596.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 8.6e-42
Identity = 89/101 (88.12%), Postives = 91/101 (90.10%), Query Frame = 0


Query: 1   MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANK 60
           MSF LTNAPAVFMDLM RVFKDFLD FVIVFIDDILVYSK EVEHED LHQVLGT  ANK
Sbjct: 554 MSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILVYSKTEVEHEDQLHQVLGTFRANK 613

Query: 61  LYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAVTSWP 102
           LYAK  KCEFWLKKVSFLGHVVSS+GVS+DPAKIE VTSWP
Sbjct: 614 LYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEVVTSWP 654

[Close]

BLAST of Cmc11g0301011 vs. NCBI nr
Match: KAA0061802.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 1.9e-41
Identity = 88/97 (90.72%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1   MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANK 60
           MSFDL NAPA+FMDLM RVFKDFLD FVIVFIDDILVYSK EVEHEDHLHQVLGTL ANK
Sbjct: 343 MSFDLINAPAIFMDLMNRVFKDFLDTFVIVFIDDILVYSKTEVEHEDHLHQVLGTLRANK 402

Query: 61  LYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAV 98
           LYAK FKCEFWLKKVSFLGHVVSS+GVS+DPAKIEAV
Sbjct: 403 LYAKFFKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAV 439

[Close]

BLAST of Cmc11g0301011 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.9e-15
Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 1   MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANK 60
           M F L NAPA F   M  + +  L+K  +V++DDI+++S    EH + +  V   L    
Sbjct: 333 MPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADAN 392

Query: 61  LYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAVTSWP 102
           L  +L KCEF  K+ +FLGH+V+ DG+  +P K++A+ S+P
Sbjct: 393 LKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYP 433

[Close]

BLAST of Cmc11g0301011 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.7e-14
Identity = 41/101 (40.59%), Postives = 59/101 (58.42%), Query Frame = 0


Query: 1   MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANK 60
           M F L NAPA F   M  + +  L+K  +V++DDI+V+S    EH   L  V   L    
Sbjct: 334 MPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKAN 393

Query: 61  LYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAVTSWP 102
           L  +L KCEF  ++ +FLGHV++ DG+  +P KIEA+  +P
Sbjct: 394 LKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYP 434

[Close]

BLAST of Cmc11g0301011 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12
Identity = 36/101 (35.64%), Postives = 59/101 (58.42%), Query Frame = 0


Query: 1   MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANK 60
           + F L NAPA+F  ++  + ++ + K   V+IDDI+V+S+    H  +L  VL +L    
Sbjct: 250 LPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKAN 309

Query: 61  LYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAVTSWP 102
           L   L K  F   +V FLG++V++DG+  DP K+ A++  P
Sbjct: 310 LQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMP 350

[Close]

BLAST of Cmc11g0301011 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-10
Identity = 31/101 (30.69%), Postives = 56/101 (55.45%), Query Frame = 0


Query: 1   MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANK 60
           + F L NA ++F   +  V ++ + K   V++DD++++S+ E +H  H+  VL  L    
Sbjct: 309 LPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCLIDAN 368

Query: 61  LYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAVTSWP 102
           +     K  F+ + V +LG +VS DG   DP K++A+  +P
Sbjct: 369 MRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYP 409

[Close]

BLAST of Cmc11g0301011 vs. ExPASy Swiss-Prot
Match: Q89703 (Putative enzymatic polyprotein OS=Cassava vein mosaic virus OX=38062 GN=ORF 3 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 9.0e-10
Identity = 35/97 (36.08%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 1   MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANK 60
           + F   N+P++F   M R+F+ + D F+IV+IDDILV+SK   EH+ H+ +      AN 
Sbjct: 333 LPFGYHNSPSIFQQFMDRIFRPYYD-FIIVYIDDILVFSKTIEEHKIHIAKFRDITLANG 392

Query: 61  LYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAV 98
           L     K E   +K+ FLG  +   G+ L P  I  +
Sbjct: 393 LIISKKKTELCKEKIDFLGVQIEQGGIELQPHIINKI 428

[Close]

BLAST of Cmc11g0301011 vs. ExPASy TrEMBL
Match: A0A5A7V7Y9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G00020 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.8e-45
Identity = 92/101 (91.09%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANK 60
           MSFDLTNAPAVFMDLM +VFKDFLD+FVIVFIDDILVYSKIEVE+EDHLHQVLGTL ANK
Sbjct: 474 MSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANK 533

Query: 61  LYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAVTSWP 102
           LYAK FKCEFWLKKVSFLGHVVSS GVS+DPAKIE VTSWP
Sbjct: 534 LYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTSWP 574

[Close]

BLAST of Cmc11g0301011 vs. ExPASy TrEMBL
Match: A0A5A7V3F7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G00320 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.4e-44
Identity = 90/101 (89.11%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANK 60
           MSFDLTNAPAVFMDLM +VFKDFLD+FVIVFIDDILVYSKIEVE+EDHLHQVLGTL ANK
Sbjct: 260 MSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANK 319

Query: 61  LYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAVTSWP 102
           LYAK FKCEFWLKKVSFLGHVVSS GVS+DP+KI+ VTSWP
Sbjct: 320 LYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPSKIKVVTSWP 360

[Close]

BLAST of Cmc11g0301011 vs. ExPASy TrEMBL
Match: A0A5A7SXZ8 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003560 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 8.4e-43
Identity = 89/101 (88.12%), Postives = 93/101 (92.08%), Query Frame = 0


Query: 1   MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANK 60
           MSF LTNAPAVFMDLM RVFKDFLD FVIVFIDDILVYSK EVEHEDHLHQVLGTL ANK
Sbjct: 395 MSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILVYSKTEVEHEDHLHQVLGTLRANK 454

Query: 61  LYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAVTSWP 102
           LYAK  KCEFWLKKVSFLGHV+ S+GVS+DPAKIEA+TSWP
Sbjct: 455 LYAKFSKCEFWLKKVSFLGHVMFSEGVSVDPAKIEAITSWP 495

[Close]

BLAST of Cmc11g0301011 vs. ExPASy TrEMBL
Match: A0A5D3E7D9 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G001000 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.1e-42
Identity = 89/101 (88.12%), Postives = 91/101 (90.10%), Query Frame = 0


Query: 1   MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANK 60
           MSF LTNAPAVFMDLM RVFKDFLD FVIVFIDDILVYSK EVEHED LHQVLGT  ANK
Sbjct: 554 MSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILVYSKTEVEHEDQLHQVLGTFRANK 613

Query: 61  LYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAVTSWP 102
           LYAK  KCEFWLKKVSFLGHVVSS+GVS+DPAKIE VTSWP
Sbjct: 614 LYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEVVTSWP 654

[Close]

BLAST of Cmc11g0301011 vs. ExPASy TrEMBL
Match: A0A5D3CU13 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00910 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 9.2e-42
Identity = 89/101 (88.12%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 1   MSFDLTNAPAVFMDLMTRVFKDFLDKFVIVFIDDILVYSKIEVEHEDHLHQVLGTLGANK 60
           M F+LTNAPAVFMDLM RVFKDFL+KFVI+FIDDILVYSKIEVE+EDHL QVL TL ANK
Sbjct: 79  MFFNLTNAPAVFMDLMNRVFKDFLNKFVIIFIDDILVYSKIEVEYEDHLLQVLRTLRANK 138

Query: 61  LYAKLFKCEFWLKKVSFLGHVVSSDGVSLDPAKIEAVTSWP 102
           LYAK FKCEFWLKKVSFLGHVVSSD VS+DPAKIEAVTSWP
Sbjct: 139 LYAKFFKCEFWLKKVSFLGHVVSSDEVSIDPAKIEAVTSWP 179

[Close]

BLAST of Cmc11g0301011 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 8.6e-08
Identity = 24/57 (42.11%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 47  DHLHQVLGTLGANKLYAKLFKCEFWLKKVSFLG--HVVSSDGVSLDPAKIEAVTSWP 102
           +HL  VL     ++ YA   KC F   ++++LG  H++S +GVS DPAK+EA+  WP
Sbjct: 2   NHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWP 58

The following BLAST results are available for this feature:

BLAST of Cmc11g0301011 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061789.1	1.4e-44	91.09	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0061810.1	9.1e-44	89.11	pol protein [Cucumis melo var. makuwa]	[more]
KAA0035443.1	1.7e-42	88.12	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK31081.1 ty3-gyp...	[more]
KAA0048739.1	8.6e-42	88.12	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK31596.1 D...	[more]
KAA0061802.1	1.9e-41	90.72	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0301011 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	1.9e-15	38.61	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	2.7e-14	40.59	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	1.5e-12	35.64	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P10401	1.8e-10	30.69	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]
Q89703	9.0e-10	36.08	Putative enzymatic polyprotein OS=Cassava vein mosaic virus OX=38062 GN=ORF 3 PE...	[more]

BLAST of Cmc11g0301011 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V7Y9	6.8e-45	91.09	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89...	[more]
A0A5A7V3F7	4.4e-44	89.11	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89...	[more]
A0A5A7SXZ8	8.4e-43	88.12	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3E7D9	4.1e-42	88.12	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CU13	9.2e-42	88.12	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00910 PE...	[more]

BLAST of Cmc11g0301011 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	8.6e-08	42.11	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..89 e-value: 2.4E-30 score: 107.1
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 5..81 e-value: 3.5E-11 score: 43.1
None	No IPR available	PANTHER	PTHR24559:SF345	SUBFAMILY NOT NAMED	coord: 17..101
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 17..101
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..82 e-value: 5.25493E-32 score: 108.452
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0301011.1	Cmc11g0301011.1	mRNA