Cmc11g0299881 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0299881
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr11: 20258266 .. 20259045 (+)
RNA-Seq ExpressionCmc11g0299881
SyntenyCmc11g0299881
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTAATTAATTTTGTTGTATTAAAATTCTTTTGAAAAATTATTATAAGCTAGCTTAATTACTACTACTTCTGACAATGTGGTTGTTGCAATGAAACAAGAACTCTCGTCCCAGAATCAATTACTATATATTATTTATCTTGTAGCTGTTATGATTATAAATTCTAAAATTTTAGTTTTGGAACATTCATAGCATTAAAAGATTTTCTTTCTTTTTTGATATGGTAAGAGTGGGGCATTGTTCAAAATCAACGCATGCAAAACAAAACAAAAAAGACTAGAAAGGTACAAGAAAGTGAAAATAATAATGTATACACACGACACTAATTGAAAGAAGTTGGTGATGGGGTGGGATCACGAACTTGAAAGAAATGGCGATTCTTGACAACAATGTCATACATATGCATGGGCTTAAATTTGGCGAAGCTTTTAGGGAGGGAAATCAAGTGAGCCGATTCATGAGAGCGGTGAAATTGGAGGAGATCCGGTTCGGCTATATTTGGGTACCGAGTCCACCCGAGTTCGGCCAGCCGTTGCTCGAGTTCGGCATAGGACCGTATGACTTGGTTGGTTGGAAGGTAGACGAGGACTCTGGGGCGAGCCCCCGGGGCGGTGGCAGTGCCTGGATGGGGCGGGTCCTTGCACTCGAAGGACTCCCTGGTTGGGTTGGATATGAGACGAGCCACGCCATTTTTGTCGAACACCCAAACGCCGGACATGGTTCGAGAGAGAGAGACCGGGGAGGTGGGGAAAGAAAGAGAGAAAAGGTTTTAGATTTATAG

mRNA sequence

GTTAATTAATTTTGTTGTATTAAAATTCTTTTGAAAAATTATTATAAGCTAGCTTAATTACTACTACTTCTGACAATGTGGTTGTTGCAATGAAACAAGAACTCTCGTCCCAGAATCAATTACTATATATTATTTATCTTGTAGCTGTTATGATTATAAATTCTAAAATTTTAGTTTTGGAACATTCATAGCATTAAAAGATTTTCTTTCTTTTTTGATATGGTAAGAGTGGGGCATTGTTCAAAATCAACGCATGCAAAACAAAACAAAAAAGACTAGAAAGGTACAAGAAAGTGAAAATAATAATGTATACACACGACACTAATTGAAAGAAGTTGGTGATGGGGTGGGATCACGAACTTGAAAGAAATGGCGATTCTTGACAACAATGTCATACATATGCATGGGCTTAAATTTGGCGAAGCTTTTAGGGAGGGAAATCAAGTGAGCCGATTCATGAGAGCGGTGAAATTGGAGGAGATCCGGTTCGGCTATATTTGGGTACCGAGTCCACCCGAGTTCGGCCAGCCGTTGCTCGAGTTCGGCATAGGACCGTATGACTTGGTTGGTTGGAAGGTAGACGAGGACTCTGGGGCGAGCCCCCGGGGCGGTGGCAGTGCCTGGATGGGGCGGGTCCTTGCACTCGAAGGACTCCCTGGTTGGGTTGGATATGAGACGAGCCACGCCATTTTTGTCGAACACCCAAACGCCGGACATGGTTCGAGAGAGAGAGACCGGGGAGGTGGGGAAAGAAAGAGAGAAAAGGTTTTAGATTTATAG

Coding sequence (CDS)

ATGGCGATTCTTGACAACAATGTCATACATATGCATGGGCTTAAATTTGGCGAAGCTTTTAGGGAGGGAAATCAAGTGAGCCGATTCATGAGAGCGGTGAAATTGGAGGAGATCCGGTTCGGCTATATTTGGGTACCGAGTCCACCCGAGTTCGGCCAGCCGTTGCTCGAGTTCGGCATAGGACCGTATGACTTGGTTGGTTGGAAGGTAGACGAGGACTCTGGGGCGAGCCCCCGGGGCGGTGGCAGTGCCTGGATGGGGCGGGTCCTTGCACTCGAAGGACTCCCTGGTTGGGTTGGATATGAGACGAGCCACGCCATTTTTGTCGAACACCCAAACGCCGGACATGGTTCGAGAGAGAGAGACCGGGGAGGTGGGGAAAGAAAGAGAGAAAAGGTTTTAGATTTATAG

Protein sequence

MAILDNNVIHMHGLKFGEAFREGNQVSRFMRAVKLEEIRFGYIWVPSPPEFGQPLLEFGIGPYDLVGWKVDEDSGASPRGGGSAWMGRVLALEGLPGWVGYETSHAIFVEHPNAGHGSRERDRGGGERKREKVLDL
Homology
BLAST of Cmc11g0299881 vs. NCBI nr
Match: KAE8646966.1 (hypothetical protein Csa_020846 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 6.5e-37
Identity = 76/99 (76.77%), Postives = 82/99 (82.83%), Query Frame = 0

Query: 37  EIRFGYIWVPSPPEFGQPLLEFGIGPYDLVGWKVDEDSGASPRGGGSAWMGRVLALEGLP 96
           ++ FG IWVPSP EFG+PLLEFG+GPYDLVGWKVDED G SP GGG AWMGRVLALE  P
Sbjct: 27  KMSFGQIWVPSPAEFGEPLLEFGVGPYDLVGWKVDEDPGTSPWGGGGAWMGRVLALERFP 86

Query: 97  GWVGYETSHAIFVEHPNAGHGSRERD-RGGGERKREKVL 135
           GWVGY+TSH IFVEHPNAGH S ERD R GGE KR K +
Sbjct: 87  GWVGYQTSHTIFVEHPNAGHDSGERDRRSGGEIKRAKAV 125

BLAST of Cmc11g0299881 vs. NCBI nr
Match: KAA8543870.1 (hypothetical protein F0562_021953 [Nyssa sinensis])

HSP 1 Score: 92.8 bits (229), Expect = 2.4e-15
Identity = 44/95 (46.32%), Postives = 65/95 (68.42%), Query Frame = 0

Query: 1   MAILDNNVIHMHGLKFGEAFREGNQVSRFMRAVKLEEIRFGYIWVPSPPEFGQPLLEFGI 60
           +A+LD++++H+ GL+ GE FRE N++  F  +V+LE++R   + V  P E G+ LLE G+
Sbjct: 23  IAVLDDDIVHVDGLEVGEVFRERNEMVGFFGSVELEKVRPVGVVVAGPAELGESLLELGV 82

Query: 61  GPYDLVGWKVDEDSGASPRGGGSAWMGRVLALEGL 96
           G YD+V  +VD+DSG   R  G AW+G  L LEGL
Sbjct: 83  GSYDVVRREVDQDSGTCARCCGCAWVGWFLMLEGL 117

BLAST of Cmc11g0299881 vs. NCBI nr
Match: MBA0679042.1 (hypothetical protein [Gossypium aridum])

HSP 1 Score: 70.9 bits (172), Expect = 9.8e-09
Identity = 40/99 (40.40%), Postives = 52/99 (52.53%), Query Frame = 0

Query: 3   ILDNNVIHMHGLKFGEAFREGNQVSRFMRAVKLEEIRFGYIWVPSPPEFGQPLLEFGIGP 62
           +LD+NV+H+   + G                  EE+R G + V  P EF Q +LE GIG 
Sbjct: 324 VLDDNVVHVQSPEVG------------------EEVRLGEVVVTGPTEFAQAVLELGIGV 383

Query: 63  YDLVGWKVDEDSGASPRGGGSAWMGRVLALEGLPGWVGY 102
            DLVG +VDED  +SP  GG A + RV  LEG    +GY
Sbjct: 384 DDLVGREVDEDPWSSPGCGGGAGINRVFMLEGFSSGIGY 404

BLAST of Cmc11g0299881 vs. NCBI nr
Match: MBA0852939.1 (hypothetical protein [Gossypium schwendimanii])

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-08
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 0

Query: 35  LEEIRFGYIWVPSPPEFGQPLLEFGIGPYDLVGWKVDEDSGASPRGGGSAWMGRVLALEG 94
           L+E+R G + V  P EFGQ +LE GIG  DLVG +VDED+ +SP  GG A + RV  LEG
Sbjct: 278 LKEVRLGEVVVTGPTEFGQAVLELGIGVDDLVGREVDEDTWSSPGCGGGAGINRVFMLEG 337

Query: 95  LPGWVGY 102
               +GY
Sbjct: 338 FSSGIGY 344

BLAST of Cmc11g0299881 vs. NCBI nr
Match: KAF7823644.1 (Flowering-promoting factor 1-like protein 1 [Senna tora])

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-07
Identity = 39/99 (39.39%), Postives = 58/99 (58.59%), Query Frame = 0

Query: 3   ILDNNVIHMHGLKFGEAFREGNQVSRFMRAVKLEEIRFGYIWVPSPPEFGQPLLEFGIGP 62
           ++ +N++ M  L+  E  REGN+V   + A++L E+R   + VPSPPE  + +L+   GP
Sbjct: 40  VVKDNLVEMEVLEVVEVGREGNEVRGGVGAMELNELR--RVVVPSPPELDEAVLQLVEGP 99

Query: 63  YDLVGWKVDED--SGASPRGGGSAWMGRVLALEGLPGWV 100
             ++G +VDE   S A  RGG  A   R + LEG  GWV
Sbjct: 100 NHVIGREVDEHPRSCAGGRGGAGAGERRRVLLEGFSGWV 136

BLAST of Cmc11g0299881 vs. ExPASy TrEMBL
Match: A0A5J5BP01 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_021953 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15
Identity = 44/95 (46.32%), Postives = 65/95 (68.42%), Query Frame = 0

Query: 1   MAILDNNVIHMHGLKFGEAFREGNQVSRFMRAVKLEEIRFGYIWVPSPPEFGQPLLEFGI 60
           +A+LD++++H+ GL+ GE FRE N++  F  +V+LE++R   + V  P E G+ LLE G+
Sbjct: 23  IAVLDDDIVHVDGLEVGEVFRERNEMVGFFGSVELEKVRPVGVVVAGPAELGESLLELGV 82

Query: 61  GPYDLVGWKVDEDSGASPRGGGSAWMGRVLALEGL 96
           G YD+V  +VD+DSG   R  G AW+G  L LEGL
Sbjct: 83  GSYDVVRREVDQDSGTCARCCGCAWVGWFLMLEGL 117

BLAST of Cmc11g0299881 vs. ExPASy TrEMBL
Match: A0A7J8WVU2 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_010840 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.8e-09
Identity = 40/99 (40.40%), Postives = 52/99 (52.53%), Query Frame = 0

Query: 3   ILDNNVIHMHGLKFGEAFREGNQVSRFMRAVKLEEIRFGYIWVPSPPEFGQPLLEFGIGP 62
           +LD+NV+H+   + G                  EE+R G + V  P EF Q +LE GIG 
Sbjct: 324 VLDDNVVHVQSPEVG------------------EEVRLGEVVVTGPTEFAQAVLELGIGV 383

Query: 63  YDLVGWKVDEDSGASPRGGGSAWMGRVLALEGLPGWVGY 102
            DLVG +VDED  +SP  GG A + RV  LEG    +GY
Sbjct: 384 DDLVGREVDEDPWSSPGCGGGAGINRVFMLEGFSSGIGY 404

BLAST of Cmc11g0299881 vs. ExPASy TrEMBL
Match: A0A7J9L3G6 (Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_011564 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 8.1e-09
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 0

Query: 35  LEEIRFGYIWVPSPPEFGQPLLEFGIGPYDLVGWKVDEDSGASPRGGGSAWMGRVLALEG 94
           L+E+R G + V  P EFGQ +LE GIG  DLVG +VDED+ +SP  GG A + RV  LEG
Sbjct: 278 LKEVRLGEVVVTGPTEFGQAVLELGIGVDDLVGREVDEDTWSSPGCGGGAGINRVFMLEG 337

Query: 95  LPGWVGY 102
               +GY
Sbjct: 338 FSSGIGY 344

BLAST of Cmc11g0299881 vs. ExPASy TrEMBL
Match: A0A7J9DNI5 (Uncharacterized protein (Fragment) OS=Gossypium trilobum OX=34281 GN=Gotri_011927 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.2e-05
Identity = 33/80 (41.25%), Postives = 43/80 (53.75%), Query Frame = 0

Query: 3   ILDNNVIHMHGLKFGEAFREGNQVSRFMRAVKLEEIRFGYIWVPSPPEFGQPLLEFGIGP 62
           +LD+NV+H+   + G                  EE+R G + V  P EFGQ +LE GIG 
Sbjct: 245 VLDDNVVHVQSPEVG------------------EEVRLGEVVVTGPTEFGQAVLELGIGV 304

Query: 63  YDLVGWKVDEDSGASPRGGG 83
            DLVG +VDED  +SP  GG
Sbjct: 305 DDLVGREVDEDPWSSPGCGG 306

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8646966.16.5e-3776.77hypothetical protein Csa_020846 [Cucumis sativus][more]
KAA8543870.12.4e-1546.32hypothetical protein F0562_021953 [Nyssa sinensis][more]
MBA0679042.19.8e-0940.40hypothetical protein [Gossypium aridum][more]
MBA0852939.11.7e-0852.24hypothetical protein [Gossypium schwendimanii][more]
KAF7823644.11.9e-0739.39Flowering-promoting factor 1-like protein 1 [Senna tora][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5J5BP011.2e-1546.32Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_021953 PE=4 SV=1[more]
A0A7J8WVU24.8e-0940.40Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_010840 PE=3 SV=1[more]
A0A7J9L3G68.1e-0952.24Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_011564 PE=3... [more]
A0A7J9DNI53.2e-0541.25Uncharacterized protein (Fragment) OS=Gossypium trilobum OX=34281 GN=Gotri_01192... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..136

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0299881.1Cmc11g0299881.1mRNA