Cmc11g0299181 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0299181
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr11: 19620584 .. 19620958 (-)
RNA-Seq Expression	Cmc11g0299181
Synteny	Cmc11g0299181

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGTGCCTTGTAGGTAAATTAATTTACTTATCCCATACACGTCATGATATTTCCATTGTTGTGAGTGTTGTCAGCCAGTTTATGCAAGTTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATTCTGAGATACTTGAAAAATTCACCTGGTAAAGAGTTGATGTTTAGAAAAACAAATAGAAAAACCATTAAGGCATATACTGACTCGGATTGGGCAGGATCTGTTGTTGACAGAAAGTCTACCTTCGGTTATTGTACCTTTGTTTGGGTAATCATGTAA

mRNA sequence

ATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGTGCCTTGTAGGTAAATTAATTTACTTATCCCATACACGTCATGATATTTCCATTGTTGTGAGTGTTGTCAGCCAGTTTATGCAAGTTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATTCTGAGATACTTGAAAAATTCACCTGGTAAAGAGTTGATGTTTAGAAAAACAAATAGAAAAACCATTAAGGCATATACTGACTCGGATTGGGCAGGATCTGTTGTTGACAGAAAGTCTACCTTCGGTTATTGTACCTTTGTTTGGGTAATCATGTAA

Coding sequence (CDS)

ATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGTGCCTTGTAGGTAAATTAATTTACTTATCCCATACACGTCATGATATTTCCATTGTTGTGAGTGTTGTCAGCCAGTTTATGCAAGTTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATTCTGAGATACTTGAAAAATTCACCTGGTAAAGAGTTGATGTTTAGAAAAACAAATAGAAAAACCATTAAGGCATATACTGACTCGGATTGGGCAGGATCTGTTGTTGACAGAAAGTCTACCTTCGGTTATTGTACCTTTGTTTGGGTAATCATGTAA

Protein sequence

MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFMQVPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTFVWVIM

Homology

[Close]

BLAST of Cmc11g0299181 vs. NCBI nr
Match: KAA0057585.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 234.2 bits (596), Expect = 6.1e-58
Identity = 112/121 (92.56%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFMQ 60
           MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTR DIS VVSVVSQFMQ
Sbjct: 766 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFVVSVVSQFMQ 825

Query: 61  VPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTFV 120
           V YEKHMEAVNRILRYLKN+PGK LMFRKTNRKTI+AYTDSDWA SV+DRKST GYCTFV
Sbjct: 826 VSYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWARSVIDRKSTSGYCTFV 885

Query: 121 W 122
           W
Sbjct: 886 W 886

[Close]

BLAST of Cmc11g0299181 vs. NCBI nr
Match: TYK03082.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 234.2 bits (596), Expect = 6.1e-58
Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTR DIS  VSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   VPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTFV 120
             PYEKHMEAVNRILRYLKN+PG+ LMFRKTNRKTI+AYTDSDWAGSV+DRKSTFGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGQGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTFGYCTFV 1472

Query: 121  W 122
            W
Sbjct: 1473 W 1473

[Close]

BLAST of Cmc11g0299181 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 232.6 bits (592), Expect = 1.8e-57
Identity = 111/121 (91.74%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTR DIS  VSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   VPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTFV 120
             PYEKHMEAVNRILRYLKN+PGK LMFRKTNRKTI+AYTDSDWAGSV+DRKST GYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  W 122
            W
Sbjct: 1473 W 1473

[Close]

BLAST of Cmc11g0299181 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 232.6 bits (592), Expect = 1.8e-57
Identity = 111/121 (91.74%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTR DIS  VSVVSQFMQ
Sbjct: 1327 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1386

Query: 61   VPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTFV 120
             PYEKHMEAVNRILRYLKN+PGK LMFRKTNRKTI+AYTDSDWAGSV+DRKST GYCTFV
Sbjct: 1387 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1446

Query: 121  W 122
            W
Sbjct: 1447 W 1447

[Close]

BLAST of Cmc11g0299181 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 232.6 bits (592), Expect = 1.8e-57
Identity = 111/121 (91.74%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTR DIS  VSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   VPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTFV 120
             PYEKHMEAVNRILRYLKN+PGK LMFRKTNRKTI+AYTDSDWAGSV+DRKST GYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  W 122
            W
Sbjct: 1473 W 1473

[Close]

BLAST of Cmc11g0299181 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.8e-19
Identity = 48/120 (40.00%), Postives = 72/120 (60.00%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFMQ 60
            M+  +P  TP+  + KL         D  +Y+ +VG L YL+ TR DIS  V+ +SQFM 
Sbjct: 1215 MITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMH 1274

Query: 61   VPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTFV 120
            +P E+H++A+ RILRYL  +P   +  +K N  ++ AY+D+DWAG   D  ST GY  ++
Sbjct: 1275 MPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYL 1334

[Close]

BLAST of Cmc11g0299181 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.2e-17
Identity = 47/121 (38.84%), Postives = 74/121 (61.16%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLG-NSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFM 60
            ML  +P  TP+  + KL  +S  ++P D  +Y+ +VG L YL+ TR D+S  V+ +SQ+M
Sbjct: 1198 MLTAKPVATPMATSPKLTLHSGTKLP-DPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYM 1257

Query: 61   QVPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTF 120
             +P + H  A+ R+LRYL  +P   +  +K N  ++ AY+D+DWAG   D  ST GY  +
Sbjct: 1258 HMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVY 1317

[Close]

BLAST of Cmc11g0299181 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-16
Identity = 45/120 (37.50%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 1   MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFMQ 60
           ML C+P  TP+        S  + P D   ++ +VG L YL+ TR DIS  V++V Q M 
Sbjct: 71  MLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 130

Query: 61  VPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTFV 120
            P     + + R+LRY+K +    L   K ++  ++A+ DSDWAG    R+ST G+CTF+
Sbjct: 131 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 189

[Close]

BLAST of Cmc11g0299181 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-12
Identity = 46/123 (37.40%), Postives = 70/123 (56.91%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNS------DDQVPVDKEQYQCLVGKLIY-LSHTRHDISIVVS 60
            M   +P  TP+  + KL         +++  + K  Y   VG L+Y +  TR DI+  V 
Sbjct: 1075 MKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVG 1134

Query: 61   VVSQFMQVPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKST 117
            VVS+F++ P ++H EAV  ILRYL+ + G  L F  ++   +K YTD+D AG + +RKS+
Sbjct: 1135 VVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSD-PILKGYTDADMAGDIDNRKSS 1194

[Close]

BLAST of Cmc11g0299181 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 68.6 bits (166), Expect = 5.8e-11
Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 1    MLGCRPADTPI--EFNCKLGNSDDQVPVDKEQYQCLVGKLIYLS-HTRHDISIVVSVVSQ 60
            M  C    TP+  + N +L NSD+         + L+G L+Y+   TR D++  V+++S+
Sbjct: 1152 MENCNAVSTPLPSKINYELLNSDEDC---NTPCRSLIGCLMYIMLCTRPDLTTAVNILSR 1211

Query: 61   FMQVPYEKHMEAVNRILRYLKNSPGKELMFRK--TNRKTIKAYTDSDWAGSVVDRKSTFG 117
            +      +  + + R+LRYLK +   +L+F+K       I  Y DSDWAGS +DRKST G
Sbjct: 1212 YSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTG 1269

[Close]

BLAST of Cmc11g0299181 vs. ExPASy TrEMBL
Match: A0A5A7UVJ5 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00580 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.0e-58
Identity = 112/121 (92.56%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFMQ 60
           MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTR DIS VVSVVSQFMQ
Sbjct: 766 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFVVSVVSQFMQ 825

Query: 61  VPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTFV 120
           V YEKHMEAVNRILRYLKN+PGK LMFRKTNRKTI+AYTDSDWA SV+DRKST GYCTFV
Sbjct: 826 VSYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWARSVIDRKSTSGYCTFV 885

Query: 121 W 122
           W
Sbjct: 886 W 886

[Close]

BLAST of Cmc11g0299181 vs. ExPASy TrEMBL
Match: A0A5D3BW68 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001890 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.0e-58
Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTR DIS  VSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   VPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTFV 120
             PYEKHMEAVNRILRYLKN+PG+ LMFRKTNRKTI+AYTDSDWAGSV+DRKSTFGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGQGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTFGYCTFV 1472

Query: 121  W 122
            W
Sbjct: 1473 W 1473

[Close]

BLAST of Cmc11g0299181 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 8.6e-58
Identity = 111/121 (91.74%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTR DIS  VSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   VPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTFV 120
             PYEKHMEAVNRILRYLKN+PGK LMFRKTNRKTI+AYTDSDWAGSV+DRKST GYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  W 122
            W
Sbjct: 1473 W 1473

[Close]

BLAST of Cmc11g0299181 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 8.6e-58
Identity = 111/121 (91.74%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTR DIS  VSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   VPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTFV 120
             PYEKHMEAVNRILRYLKN+PGK LMFRKTNRKTI+AYTDSDWAGSV+DRKST GYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  W 122
            W
Sbjct: 1473 W 1473

[Close]

BLAST of Cmc11g0299181 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 8.6e-58
Identity = 111/121 (91.74%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTR DIS  VSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   VPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTFV 120
             PYEKHMEAVNRILRYLKN+PGK LMFRKTNRKTI+AYTDSDWAGSV+DRKST GYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  W 122
            W
Sbjct: 1473 W 1473

[Close]

BLAST of Cmc11g0299181 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17
Identity = 45/120 (37.50%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 1   MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFMQ 60
           ML C+P  TP+        S  + P D   ++ +VG L YL+ TR DIS  V++V Q M 
Sbjct: 71  MLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 130

Query: 61  VPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTFV 120
            P     + + R+LRY+K +    L   K ++  ++A+ DSDWAG    R+ST G+CTF+
Sbjct: 131 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 189

[Close]

BLAST of Cmc11g0299181 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 82.0 bits (201), Expect = 3.6e-16
Identity = 40/120 (33.33%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 1   MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRHDISIVVSVVSQFMQ 60
           +LGC+P+  P++ +           VD + Y+ L+G+L+YL  TR DIS  V+ +SQF +
Sbjct: 348 LLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSE 407

Query: 61  VPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAYTDSDWAGSVVDRKSTFGYCTFV 120
            P   H +AV +IL Y+K + G+ L +       ++ ++D+ +      R+ST GYC F+
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467

[Close]

BLAST of Cmc11g0299181 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.0e-10
Identity = 30/82 (36.59%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 39  IYLSHTRHDISIVVSVVSQFMQVPYEKHMEAVNRILRYLKNSPGKELMFRKTNRKTIKAY 98
           +YL+ TR D++  V+ +SQF        M+AV ++L Y+K + G+ L +  T+   +KA+
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 99  TDSDWAGSVVDRKSTFGYCTFV 121
            DSDWA     R+S  G+C+ V
Sbjct: 61  ADSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of Cmc11g0299181 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0057585.1	6.1e-58	92.56	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK03082.1	6.1e-58	91.74	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYJ99952.1	1.8e-57	91.74	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
KAA0031941.1	1.8e-57	91.74	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK08054.1	1.8e-57	91.74	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0299181 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	5.8e-19	40.00	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	3.2e-17	38.84	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92519	1.6e-16	37.50	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P10978	1.4e-12	37.40	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	5.8e-11	35.54	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cmc11g0299181 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UVJ5	3.0e-58	92.56	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G0...	[more]
A0A5D3BW68	3.0e-58	91.74	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00...	[more]
A0A5D3BJK7	8.6e-58	91.74	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	8.6e-58	91.74	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	8.6e-58	91.74	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]

BLAST of Cmc11g0299181 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00810.1	1.1e-17	37.50	DNA/RNA polymerases superfamily protein	[more]
AT4G23160.1	3.6e-16	33.33	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00240.1	3.0e-10	36.59	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF308	SUBFAMILY NOT NAMED	coord: 26..119
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 26..119
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 22..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0299181.1	Cmc11g0299181.1	mRNA