Cmc11g0299061 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0299061
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 19294506 .. 19295375 (+)
RNA-Seq Expression	Cmc11g0299061
Synteny	Cmc11g0299061

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACACTGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCTAGTAGTGTTTATGGATTTGATGAACAGAGTGTTCAGGGAGTTCCTACACACTTTTATGATCGTGTTCATTGACGATATTTTGATATATTCCAAGACAGAGGCAGAGCATGAGGAGCATTTACGCATGGTTCTAGAAACCCTTCGAGCTAATAAATTGTATGCAAAGTTCTCAAAATGTGAGTTTTGGTTGAAGCAGGTATCCTTTCTAGGCCATGTGGTTTCTAAAGCTTGTGTTTCTGTGCATCTCGCTAAGATAGAGGCAGTCACCAGTTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGATTTAGCAAGTTATTACCGACGGTTTGTGGAGAACTTTTCCCATATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTCTGTTTGGAGCAAGGCCTGTGAGGACAGTTTTCAGAACCTTAAACAGAAACTTGTTACTGCATTGGTTCTTACTGTACCTGATGGTTCAGGGAGTTTTGTGATTTACGGTGATGCTTCTAAGAAAGGTTTGAGTTGTGTTCTGATGCAACAAGGTAAGGTAGTCGGTTATGCTTCTCGTCAGCTGAAGAGTCATGAGCAGAATTACCTTACCCATGATTTAGAGTTGGCAGCAGTAGTTTTTGCACTGAAGATATGGAGATCTTACTTGTATGGTGAAAAGATACAGATCTTTACGGATCATAAAAGCTTGAAATACTTCTTCACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAATTAGTAAAGGATTACGATTGTGAGATATTGTATCATCCAGCAGGGCGAATGTGGTAG

mRNA sequence

ATGGACACTGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCTAGTAGTGTTTATGGATTTGATGAACAGAGTGTTCAGGGAGTTCCTACACACTTTTATGATCGTGTTCATTGACGATATTTTGATATATTCCAAGACAGAGGCAGAGCATGAGGAGCATTTACGCATGGTTCTAGAAACCCTTCGAGCTAATAAATTGTATGCAAAGTTCTCAAAATGTGAGTTTTGGTTGAAGCAGGTATCCTTTCTAGGCCATGTGGTTTCTAAAGCTTGTGTTTCTGTGCATCTCGCTAAGATAGAGGCAGTCACCAGTTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGATTTAGCAAGTTATTACCGACGGTTTGTGGAGAACTTTTCCCATATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTCTGTTTGGAGCAAGGCCTGTGAGGACAGTTTTCAGAACCTTAAACAGAAACTTGTTACTGCATTGGTTCTTACTGTACCTGATGGTTCAGGGAGTTTTGTGATTTACGGTGATGCTTCTAAGAAAGGTTTGAGTTGTGTTCTGATGCAACAAGGTAAGGTAGTCGGTTATGCTTCTCGTCAGCTGAAGAGTCATGAGCAGAATTACCTTACCCATGATTTAGAGTTGGCAGCAGTAGTTTTTGCACTGAAGATATGGAGATCTTACTTGTATGGTGAAAAGATACAGATCTTTACGGATCATAAAAGCTTGAAATACTTCTTCACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAATTAGTAAAGGATTACGATTGTGAGATATTGTATCATCCAGCAGGGCGAATGTGGTAG

Coding sequence (CDS)

ATGGACACTGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCTAGTAGTGTTTATGGATTTGATGAACAGAGTGTTCAGGGAGTTCCTACACACTTTTATGATCGTGTTCATTGACGATATTTTGATATATTCCAAGACAGAGGCAGAGCATGAGGAGCATTTACGCATGGTTCTAGAAACCCTTCGAGCTAATAAATTGTATGCAAAGTTCTCAAAATGTGAGTTTTGGTTGAAGCAGGTATCCTTTCTAGGCCATGTGGTTTCTAAAGCTTGTGTTTCTGTGCATCTCGCTAAGATAGAGGCAGTCACCAGTTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGATTTAGCAAGTTATTACCGACGGTTTGTGGAGAACTTTTCCCATATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTCTGTTTGGAGCAAGGCCTGTGAGGACAGTTTTCAGAACCTTAAACAGAAACTTGTTACTGCATTGGTTCTTACTGTACCTGATGGTTCAGGGAGTTTTGTGATTTACGGTGATGCTTCTAAGAAAGGTTTGAGTTGTGTTCTGATGCAACAAGGTAAGGTAGTCGGTTATGCTTCTCGTCAGCTGAAGAGTCATGAGCAGAATTACCTTACCCATGATTTAGAGTTGGCAGCAGTAGTTTTTGCACTGAAGATATGGAGATCTTACTTGTATGGTGAAAAGATACAGATCTTTACGGATCATAAAAGCTTGAAATACTTCTTCACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAATTAGTAAAGGATTACGATTGTGAGATATTGTATCATCCAGCAGGGCGAATGTGGTAG

Protein sequence

MDTEFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLASYYRRFVENFSHIATPLTQLTRKGAPSVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFVIYGDASKKGLSCVLMQQGKVVGYASRQLKSHEQNYLTHDLELAAVVFALKIWRSYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPAGRMW

Homology

[Close]

BLAST of Cmc11g0299061 vs. NCBI nr
Match: KAA0039055.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 513.8 bits (1322), Expect = 9.3e-142
Identity = 259/281 (92.17%), Postives = 265/281 (94.31%), Query Frame = 0


Query: 4   EFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETL 63
           EFIVMSFGLTNA  VFMDLMNRVFREFL TF+IVFIDDILIYSK EAEHEEHL MVL+TL
Sbjct: 184 EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMEAEHEEHLSMVLQTL 243

Query: 64  RANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLA 123
           R NKLYAKFSKCEFWLKQVSFLGHVVSKA VSV  AKIEAVTSWPRPST+SEVRSFL LA
Sbjct: 244 RDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTISEVRSFLGLA 303

Query: 124 SYYRRFVENFSHIATPLTQLTRKGAPSVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFV 183
           SYYRRFV+NFSHIATPLTQLTRKGAP VWSKACED+FQNLKQ+LVTA VLTVPDGSGSFV
Sbjct: 304 SYYRRFVKNFSHIATPLTQLTRKGAPFVWSKACEDNFQNLKQRLVTAPVLTVPDGSGSFV 363

Query: 184 IYGDASKKGLSCVLMQQGKVVGYASRQLKSHEQNYLTHDLELAAVVFALKIWRSYLYGEK 243
           IY DASKKGL CVLMQQGKVV YASRQLKSHEQNYLTHDLELAAVVFALKIWR YLYGEK
Sbjct: 364 IYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEK 423

Query: 244 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 285
           IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP
Sbjct: 424 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 464

[Close]

BLAST of Cmc11g0299061 vs. NCBI nr
Match: KAA0062719.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 513.5 bits (1321), Expect = 1.2e-141
Identity = 261/281 (92.88%), Postives = 264/281 (93.95%), Query Frame = 0


Query: 4   EFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETL 63
           EFIVMSFGLTNAL VFMDLMNRVFREFL TF+IVFIDDILIYSKTEAEHEEHLRMVL+TL
Sbjct: 237 EFIVMSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTL 296

Query: 64  RANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLA 123
           R NKLYAKFSKCEFWLKQVSFLGHVVSKA VSV  AKIEAVTSW RPSTVSEVRSFL LA
Sbjct: 297 RDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLA 356

Query: 124 SYYRRFVENFSHIATPLTQLTRKGAPSVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFV 183
            YYRRFVENFS IATPLTQLTRKGAP VWSKACEDSFQNLKQKLVTA VLTVPDGSGSFV
Sbjct: 357 GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFV 416

Query: 184 IYGDASKKGLSCVLMQQGKVVGYASRQLKSHEQNYLTHDLELAAVVFALKIWRSYLYGEK 243
           IY DASKKGL CVL+QQGKVV YASRQLKSHEQNY THDLELAAVVFALKIWR YLYGEK
Sbjct: 417 IYSDASKKGLGCVLIQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK 476

Query: 244 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 285
           IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP
Sbjct: 477 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 517

[Close]

BLAST of Cmc11g0299061 vs. NCBI nr
Match: KAA0053412.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 511.5 bits (1316), Expect = 4.6e-141
Identity = 260/281 (92.53%), Postives = 264/281 (93.95%), Query Frame = 0


Query: 4   EFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETL 63
           +FIVMSFGLTNAL VFMDLMNRVFREFL TFMIVFIDDILIYSKTEAEHEEHLRMVL+TL
Sbjct: 677 KFIVMSFGLTNALAVFMDLMNRVFREFLDTFMIVFIDDILIYSKTEAEHEEHLRMVLQTL 736

Query: 64  RANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLA 123
           R NKLYAKFSKCEFWLKQVSFLGHVVSKA VSV  AKIEAVTSW RPSTVSEVRSFL LA
Sbjct: 737 RDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLA 796

Query: 124 SYYRRFVENFSHIATPLTQLTRKGAPSVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFV 183
            YYRRFVENFS IATPLTQLTRKGAP VWSKACEDSFQNLKQKLVTA VLTVPDGSGSFV
Sbjct: 797 GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFV 856

Query: 184 IYGDASKKGLSCVLMQQGKVVGYASRQLKSHEQNYLTHDLELAAVVFALKIWRSYLYGEK 243
           IY DASKKGL CVLMQQGKVV YASRQLKSHEQNY THDLELAAVVFALKIWR YLYGEK
Sbjct: 857 IYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK 916

Query: 244 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 285
           IQIFTDHKSLKYFFTQKELNMRQ+RWLELVK+YDCEILYHP
Sbjct: 917 IQIFTDHKSLKYFFTQKELNMRQQRWLELVKNYDCEILYHP 957

[Close]

BLAST of Cmc11g0299061 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 510.8 bits (1314), Expect = 7.9e-141
Identity = 260/281 (92.53%), Postives = 262/281 (93.24%), Query Frame = 0


Query: 4   EFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETL 63
           EFIVMSFGLTNA  VFMDLMNRVFREFL TF+IVFIDDILIYSKTEAEHEEHLRMVL+TL
Sbjct: 690 EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTL 749

Query: 64  RANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLA 123
           R NKLYAKFSKCEFWLKQVSFLGHVVSKA VSV  AKIEAVT W RPSTVSEVRSFL LA
Sbjct: 750 RDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLA 809

Query: 124 SYYRRFVENFSHIATPLTQLTRKGAPSVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFV 183
            YYRRFVENFS IATPLTQLTRKGAP VWSKACEDSFQNLKQKLVTA VLTVPDGSGSFV
Sbjct: 810 GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFV 869

Query: 184 IYGDASKKGLSCVLMQQGKVVGYASRQLKSHEQNYLTHDLELAAVVFALKIWRSYLYGEK 243
           IY DASKKGL CVLMQQGKVV YASRQLKSHEQNY THDLELAAVVFALKIWR YLYGEK
Sbjct: 870 IYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK 929

Query: 244 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 285
           IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP
Sbjct: 930 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 970

[Close]

BLAST of Cmc11g0299061 vs. NCBI nr
Match: KAA0031931.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 510.8 bits (1314), Expect = 7.9e-141
Identity = 259/282 (91.84%), Postives = 263/282 (93.26%), Query Frame = 0


Query: 4    EFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETL 63
            EFIVMSFGLTNA  VFMDLMNRVFREFL TF+IVFIDDILIYSKTEAEHEEHLR+VL+TL
Sbjct: 1062 EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTL 1121

Query: 64   RANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLA 123
            R NKLYAKFSKCEFWLKQVSFLGHVVSKA VSV  AKIEAVT W RPSTVSEVRSFL LA
Sbjct: 1122 RDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLA 1181

Query: 124  SYYRRFVENFSHIATPLTQLTRKGAPSVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFV 183
             YYRRFVENFS IA PLTQLTRKGAP VWSKACEDSFQNLKQKLVTALVLTVPDGSGSFV
Sbjct: 1182 GYYRRFVENFSRIAAPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFV 1241

Query: 184  IYGDASKKGLSCVLMQQGKVVGYASRQLKSHEQNYLTHDLELAAVVFALKIWRSYLYGEK 243
            IY DASKKGL CVLMQQGKVV YASRQLKSHEQNY THDLELAAVVFALKIWR YLYGEK
Sbjct: 1242 IYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK 1301

Query: 244  IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPA 286
            IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP+
Sbjct: 1302 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPS 1343

[Close]

BLAST of Cmc11g0299061 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 5.9e-46
Identity = 100/280 (35.71%), Postives = 157/280 (56.07%), Query Frame = 0


Query: 4   EFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETL 63
           E++ M FGL NA   F   MN + R  L+   +V++DDI+++S +  EH + L +V E L
Sbjct: 330 EYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKL 389

Query: 64  RANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLA 123
               L  +  KCEF  ++ +FLGHV++   +  +  KIEA+  +P P+   E+++FL L 
Sbjct: 390 AKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLT 449

Query: 124 SYYRRFVENFSHIATPLTQLTRKGAP-SVWSKACEDSFQNLKQKLVTALVLTVPDGSGSF 183
            YYR+F+ NF+ IA P+T+  +K       +   + +F+ LK  +    +L VPD +  F
Sbjct: 450 GYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKF 509

Query: 184 VIYGDASKKGLSCVLMQQGKVVGYASRQLKSHEQNYLTHDLELAAVVFALKIWRSYLYGE 243
            +  DAS   L  VL Q G  + Y SR L  HE NY T + EL A+V+A K +R YL G 
Sbjct: 510 TLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGR 569

Query: 244 KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILY 283
             +I +DH+ L + +  K+ N +  RW   + ++D +I Y
Sbjct: 570 HFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKY 609

[Close]

BLAST of Cmc11g0299061 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.5e-44
Identity = 98/280 (35.00%), Postives = 154/280 (55.00%), Query Frame = 0


Query: 4   EFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETL 63
           E++ M FGL NA   F   MN + R  L+   +V++DDI+I+S +  EH   +++V   L
Sbjct: 329 EYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKL 388

Query: 64  RANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLA 123
               L  +  KCEF  K+ +FLGH+V+   +  +  K++A+ S+P P+   E+R+FL L 
Sbjct: 389 ADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLT 448

Query: 124 SYYRRFVENFSHIATPLTQLTRKGAPSVWSK-ACEDSFQNLKQKLVTALVLTVPDGSGSF 183
            YYR+F+ N++ IA P+T   +K       K    ++F+ LK  ++   +L +PD    F
Sbjct: 449 GYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKF 508

Query: 184 VIYGDASKKGLSCVLMQQGKVVGYASRQLKSHEQNYLTHDLELAAVVFALKIWRSYLYGE 243
           V+  DAS   L  VL Q G  + + SR L  HE NY   + EL A+V+A K +R YL G 
Sbjct: 509 VLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGR 568

Query: 244 KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILY 283
           +  I +DH+ L++    KE   +  RW   + +Y  +I Y
Sbjct: 569 QFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDY 608

[Close]

BLAST of Cmc11g0299061 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.7e-43
Identity = 100/294 (34.01%), Postives = 164/294 (55.78%), Query Frame = 0


Query: 4   EFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETL 63
           EF  + FGL NA  +F   ++ V RE +     V++DD++I+S+ E++H  H+  VL+ L
Sbjct: 305 EFCRLPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCL 364

Query: 64  RANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLA 123
               +     K  F+ + V +LG +VSK        K++A+  +P P  V +VRSFL LA
Sbjct: 365 IDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLA 424

Query: 124 SYYRRFVENFSHIATPLTQLTR-----------KGAPSVWSKACEDSFQNLKQKLVTA-L 183
           SYYR F+++F+ IA P+T + +           K  P  +++   ++FQ L+  L +  +
Sbjct: 425 SYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILASEDV 484

Query: 184 VLTVPDGSGSFVIYGDASKKGLSCVLMQQGKVVGYASRQLKSHEQNYLTHDLELAAVVFA 243
           +L  PD    F +  DAS  G+  VL Q+G+ +   SR LK  EQNY T++ EL A+V+A
Sbjct: 485 ILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITMISRTLKQPEQNYATNERELLAIVWA 544

Query: 244 LKIWRSYLYGEK-IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 285
           L   +++LYG + I IFTDH+ L +    +  N + +RW   +  ++ ++ Y P
Sbjct: 545 LGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIKRWKSYIDQHNAKVFYKP 598

[Close]

BLAST of Cmc11g0299061 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.3e-42
Identity = 95/297 (31.99%), Postives = 164/297 (55.22%), Query Frame = 0


Query: 4   EFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETL 63
           EF+ + FGL NA  +F  +++ + RE +     V+IDDI+++S+    H ++LR+VL +L
Sbjct: 246 EFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASL 305

Query: 64  RANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLA 123
               L     K  F   QV FLG++V+   +     K+ A++  P P++V E++ FL + 
Sbjct: 306 SKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMT 365

Query: 124 SYYRRFVENFSHIATPLTQLTR-----------KGAPSVWSKACEDSFQNLKQKLVTALV 183
           SYYR+F+++++ +A PLT LTR              P    +    SF +LK  L ++ +
Sbjct: 366 SYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEI 425

Query: 184 LTVPDGSGSFVIYGDASKKGLSCVLMQ----QGKVVGYASRQLKSHEQNYLTHDLELAAV 243
           L  P  +  F +  DAS   +  VL Q    + + + Y SR L   E+NY T + E+ A+
Sbjct: 426 LAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAI 485

Query: 244 VFALKIWRSYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 285
           +++L   R+YLYG   I+++TDH+ L +    +  N + +RW   +++Y+CE++Y P
Sbjct: 486 IWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKP 542

[Close]

BLAST of Cmc11g0299061 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 8.5e-37
Identity = 95/290 (32.76%), Postives = 153/290 (52.76%), Query Frame = 0


Query: 4   EFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETL 63
           E++VM +G++ A   F   +N +  E   + ++ ++DDILI+SK+E+EH +H++ VL+ L
Sbjct: 530 EYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKL 589

Query: 64  RANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLA 123
           +   L    +KCEF   QV F+G+ +S+   +     I+ V  W +P    E+R FL   
Sbjct: 590 KNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSV 649

Query: 124 SYYRRFVENFSHIATPLTQLTRKGAPSVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFV 183
           +Y R+F+   S +  PL  L +K     W+     + +N+KQ LV+  VL   D S   +
Sbjct: 650 NYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKIL 709

Query: 184 IYGDASKKGLSCVLMQQGK-----VVGYASRQLKSHEQNYLTHDLELAAVVFALKIWRSY 243
           +  DAS   +  VL Q+        VGY S ++   + NY   D E+ A++ +LK WR Y
Sbjct: 710 LETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHY 769

Query: 244 LYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP 285
           L    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Sbjct: 770 LESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRP 819

[Close]

BLAST of Cmc11g0299061 vs. ExPASy TrEMBL
Match: A0A5A7TCC7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001510 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.5e-142
Identity = 259/281 (92.17%), Postives = 265/281 (94.31%), Query Frame = 0


Query: 4   EFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETL 63
           EFIVMSFGLTNA  VFMDLMNRVFREFL TF+IVFIDDILIYSK EAEHEEHL MVL+TL
Sbjct: 184 EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMEAEHEEHLSMVLQTL 243

Query: 64  RANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLA 123
           R NKLYAKFSKCEFWLKQVSFLGHVVSKA VSV  AKIEAVTSWPRPST+SEVRSFL LA
Sbjct: 244 RDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTISEVRSFLGLA 303

Query: 124 SYYRRFVENFSHIATPLTQLTRKGAPSVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFV 183
           SYYRRFV+NFSHIATPLTQLTRKGAP VWSKACED+FQNLKQ+LVTA VLTVPDGSGSFV
Sbjct: 304 SYYRRFVKNFSHIATPLTQLTRKGAPFVWSKACEDNFQNLKQRLVTAPVLTVPDGSGSFV 363

Query: 184 IYGDASKKGLSCVLMQQGKVVGYASRQLKSHEQNYLTHDLELAAVVFALKIWRSYLYGEK 243
           IY DASKKGL CVLMQQGKVV YASRQLKSHEQNYLTHDLELAAVVFALKIWR YLYGEK
Sbjct: 364 IYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYLTHDLELAAVVFALKIWRHYLYGEK 423

Query: 244 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 285
           IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP
Sbjct: 424 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 464

[Close]

BLAST of Cmc11g0299061 vs. ExPASy TrEMBL
Match: A0A5A7VAL8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold382G00460 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 5.9e-142
Identity = 261/281 (92.88%), Postives = 264/281 (93.95%), Query Frame = 0


Query: 4   EFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETL 63
           EFIVMSFGLTNAL VFMDLMNRVFREFL TF+IVFIDDILIYSKTEAEHEEHLRMVL+TL
Sbjct: 237 EFIVMSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTL 296

Query: 64  RANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLA 123
           R NKLYAKFSKCEFWLKQVSFLGHVVSKA VSV  AKIEAVTSW RPSTVSEVRSFL LA
Sbjct: 297 RDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLA 356

Query: 124 SYYRRFVENFSHIATPLTQLTRKGAPSVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFV 183
            YYRRFVENFS IATPLTQLTRKGAP VWSKACEDSFQNLKQKLVTA VLTVPDGSGSFV
Sbjct: 357 GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFV 416

Query: 184 IYGDASKKGLSCVLMQQGKVVGYASRQLKSHEQNYLTHDLELAAVVFALKIWRSYLYGEK 243
           IY DASKKGL CVL+QQGKVV YASRQLKSHEQNY THDLELAAVVFALKIWR YLYGEK
Sbjct: 417 IYSDASKKGLGCVLIQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK 476

Query: 244 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 285
           IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP
Sbjct: 477 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 517

[Close]

BLAST of Cmc11g0299061 vs. ExPASy TrEMBL
Match: A0A5A7UCD5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00810 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.2e-141
Identity = 260/281 (92.53%), Postives = 264/281 (93.95%), Query Frame = 0


Query: 4   EFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETL 63
           +FIVMSFGLTNAL VFMDLMNRVFREFL TFMIVFIDDILIYSKTEAEHEEHLRMVL+TL
Sbjct: 677 KFIVMSFGLTNALAVFMDLMNRVFREFLDTFMIVFIDDILIYSKTEAEHEEHLRMVLQTL 736

Query: 64  RANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLA 123
           R NKLYAKFSKCEFWLKQVSFLGHVVSKA VSV  AKIEAVTSW RPSTVSEVRSFL LA
Sbjct: 737 RDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLA 796

Query: 124 SYYRRFVENFSHIATPLTQLTRKGAPSVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFV 183
            YYRRFVENFS IATPLTQLTRKGAP VWSKACEDSFQNLKQKLVTA VLTVPDGSGSFV
Sbjct: 797 GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFV 856

Query: 184 IYGDASKKGLSCVLMQQGKVVGYASRQLKSHEQNYLTHDLELAAVVFALKIWRSYLYGEK 243
           IY DASKKGL CVLMQQGKVV YASRQLKSHEQNY THDLELAAVVFALKIWR YLYGEK
Sbjct: 857 IYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK 916

Query: 244 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 285
           IQIFTDHKSLKYFFTQKELNMRQ+RWLELVK+YDCEILYHP
Sbjct: 917 IQIFTDHKSLKYFFTQKELNMRQQRWLELVKNYDCEILYHP 957

[Close]

BLAST of Cmc11g0299061 vs. ExPASy TrEMBL
Match: A0A5A7SQU8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00040 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 3.8e-141
Identity = 259/282 (91.84%), Postives = 263/282 (93.26%), Query Frame = 0


Query: 4    EFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETL 63
            EFIVMSFGLTNA  VFMDLMNRVFREFL TF+IVFIDDILIYSKTEAEHEEHLR+VL+TL
Sbjct: 1062 EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTL 1121

Query: 64   RANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLA 123
            R NKLYAKFSKCEFWLKQVSFLGHVVSKA VSV  AKIEAVT W RPSTVSEVRSFL LA
Sbjct: 1122 RDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLA 1181

Query: 124  SYYRRFVENFSHIATPLTQLTRKGAPSVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFV 183
             YYRRFVENFS IA PLTQLTRKGAP VWSKACEDSFQNLKQKLVTALVLTVPDGSGSFV
Sbjct: 1182 GYYRRFVENFSRIAAPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFV 1241

Query: 184  IYGDASKKGLSCVLMQQGKVVGYASRQLKSHEQNYLTHDLELAAVVFALKIWRSYLYGEK 243
            IY DASKKGL CVLMQQGKVV YASRQLKSHEQNY THDLELAAVVFALKIWR YLYGEK
Sbjct: 1242 IYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK 1301

Query: 244  IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPA 286
            IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP+
Sbjct: 1302 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPS 1343

[Close]

BLAST of Cmc11g0299061 vs. ExPASy TrEMBL
Match: A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 3.8e-141
Identity = 260/281 (92.53%), Postives = 262/281 (93.24%), Query Frame = 0


Query: 4   EFIVMSFGLTNALVVFMDLMNRVFREFLHTFMIVFIDDILIYSKTEAEHEEHLRMVLETL 63
           EFIVMSFGLTNA  VFMDLMNRVFREFL TF+IVFIDDILIYSKTEAEHEEHLRMVL+TL
Sbjct: 680 EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTL 739

Query: 64  RANKLYAKFSKCEFWLKQVSFLGHVVSKACVSVHLAKIEAVTSWPRPSTVSEVRSFLDLA 123
           R NKLYAKFSKCEFWLKQVSFLGHVVSKA VSV  AKIEAVT W RPSTVSEVRSFL LA
Sbjct: 740 RDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLA 799

Query: 124 SYYRRFVENFSHIATPLTQLTRKGAPSVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFV 183
            YYRRFVENFS IATPLTQLTRKGAP VWSKACEDSFQNLKQKLVTA VLTVPDGSGSFV
Sbjct: 800 GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFV 859

Query: 184 IYGDASKKGLSCVLMQQGKVVGYASRQLKSHEQNYLTHDLELAAVVFALKIWRSYLYGEK 243
           IY DASKKGL CVLMQQGKVV YASRQLKSHEQNY THDLELAAVVFALKIWR YLYGEK
Sbjct: 860 IYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK 919

Query: 244 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 285
           IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP
Sbjct: 920 IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 960

[Close]

BLAST of Cmc11g0299061 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 6.7e-21
Identity = 53/131 (40.46%), Postives = 76/131 (58.02%), Query Frame = 0


Query: 55  HLRMVLETLRANKLYAKFSKCEFWLKQVSFLG--HVVSKACVSVHLAKIEAVTSWPRPST 114
           HL MVL+    ++ YA   KC F   Q+++LG  H++S   VS   AK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 115 VSEVRSFLDLASYYRRFVENFSHIATPLTQLTRKGAPSVWSKACEDSFQNLKQKLVTALV 174
            +E+R FL L  YYRRFV+N+  I  PLT+L +K +   W++    +F+ LK  + T  V
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLK-WTEMAALAFKALKGAVTTLPV 122

Query: 175 LTVPDGSGSFV 184
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc11g0299061 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039055.1	9.3e-142	92.17	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0062719.1	1.2e-141	92.88	pol protein [Cucumis melo var. makuwa]	[more]
KAA0053412.1	4.6e-141	92.53	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	7.9e-141	92.53	pol protein [Cucumis melo var. makuwa]	[more]
KAA0031931.1	7.9e-141	91.84	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0299061 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	5.9e-46	35.71	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	2.5e-44	35.00	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P10401	2.7e-43	34.01	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]
Q8I7P9	1.3e-42	31.99	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P0CT41	8.5e-37	32.76	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Cmc11g0299061 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TCC7	4.5e-142	92.17	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84...	[more]
A0A5A7VAL8	5.9e-142	92.88	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold382G00460 PE...	[more]
A0A5A7UCD5	2.2e-141	92.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold42...	[more]
A0A5A7SQU8	3.8e-141	91.84	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7UAA8	3.8e-141	92.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]

BLAST of Cmc11g0299061 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	6.7e-21	40.46	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 180..276 e-value: 1.9E-31 score: 108.5
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 7..88 e-value: 2.1E-15 score: 56.9
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 99..180 e-value: 3.4E-29 score: 102.7
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 3..93 e-value: 6.6E-32 score: 112.2
None	No IPR available	GENE3D	3.10.20.370		coord: 181..247 e-value: 3.9E-6 score: 28.8
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 98..285
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 98..285
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 183..284 e-value: 7.69235E-46 score: 148.795
None	No IPR available	CDD	cd01647	RT_LTR	coord: 4..89 e-value: 2.0416E-36 score: 126.171
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 4..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0299061.1	Cmc11g0299061.1	mRNA