Homology
BLAST of Cmc11g0298371 vs. NCBI nr
Match:
KAA0062105.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 445.7 bits (1145), Expect = 2.4e-121
Identity = 218/222 (98.20%), Postives = 218/222 (98.20%), Query Frame = 0
Query: 1 MHLSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPMTA 60
MHLSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIP TA
Sbjct: 323 MHLSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPKTA 382
Query: 61 FNSRYGHYKFIVMSFGLTNAPVVFMNLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 120
FNSRYGHYKFIVMSFGLTNAPVVFMNLMN VFKDFLDSFVIVFIDDILIYSKTEAEHEEH
Sbjct: 383 FNSRYGHYKFIVMSFGLTNAPVVFMNLMNNVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 442
Query: 121 LHQVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWPRPSTVSE 180
LHQVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNW RPSTVSE
Sbjct: 443 LHQVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWSRPSTVSE 502
Query: 181 IRSLLGLAGYYRRFVEDFSHIASLDPVDQEGNPFCLEPSLRG 223
IRS LGLAGYYRRFVEDFSHIASLDPVDQEGNPFCLEPSLRG
Sbjct: 503 IRSFLGLAGYYRRFVEDFSHIASLDPVDQEGNPFCLEPSLRG 544
BLAST of Cmc11g0298371 vs. NCBI nr
Match:
TYK05193.1 (pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 381.3 bits (978), Expect = 5.6e-102
Identity = 188/220 (85.45%), Postives = 200/220 (90.91%), Query Frame = 0
Query: 1 MHLSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPMTA 60
M L IDYRELNKVTVKN YPLPRIDDLF QLQGATVFSKIDLRSGYHQLRIRD DIP TA
Sbjct: 684 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 743
Query: 61 FNSRYGHYKFIVMSFGLTNAPVVFMNLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 120
F SRYGHY+F+VMSFGLTNAP VFM+LMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEH
Sbjct: 744 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 803
Query: 121 LHQVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWPRPSTVSE 180
LHQVLETLRAN+LYAKFSKCEFWL+KV+FL HVVSSEG+SVDPTKI AVTNWPRPSTVSE
Sbjct: 804 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPTKIEAVTNWPRPSTVSE 863
Query: 181 IRSLLGLAGYYRRFVEDFSHIAS-LDPVDQEGNPFCLEPS 220
IRS LGLAGYYRRFVEDFS IAS L + ++G PF P+
Sbjct: 864 IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 903
BLAST of Cmc11g0298371 vs. NCBI nr
Match:
KAA0032541.1 (pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 380.9 bits (977), Expect = 7.3e-102
Identity = 188/220 (85.45%), Postives = 199/220 (90.45%), Query Frame = 0
Query: 1 MHLSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPMTA 60
M L IDYRELNKVTVKN YPLPRIDDLF QLQGATVFSKIDLRSGYHQLRIRD DIP TA
Sbjct: 613 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 672
Query: 61 FNSRYGHYKFIVMSFGLTNAPVVFMNLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 120
F SRYGHYKF+VMSFGLTNAP VFM+LMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEH
Sbjct: 673 FRSRYGHYKFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 732
Query: 121 LHQVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWPRPSTVSE 180
LHQVLETLRAN+LYAKFSKCEFWL+KV+FL HVVSSEG+SVDP KI AVTNWPRPSTVSE
Sbjct: 733 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 792
Query: 181 IRSLLGLAGYYRRFVEDFSHIAS-LDPVDQEGNPFCLEPS 220
IRS LGLAGYYRRFVEDFS IAS L + ++G PF P+
Sbjct: 793 IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 832
BLAST of Cmc11g0298371 vs. NCBI nr
Match:
KAA0055932.1 (pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 380.6 bits (976), Expect = 9.5e-102
Identity = 187/220 (85.00%), Postives = 198/220 (90.00%), Query Frame = 0
Query: 1 MHLSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPMTA 60
M L IDYRELNKVTVKNHYPLPRIDDLF QLQGATVFSKIDLRSGYHQLRIRD DIP TA
Sbjct: 641 MRLCIDYRELNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 700
Query: 61 FNSRYGHYKFIVMSFGLTNAPVVFMNLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 120
F SRYGHY+F+VMSFGLTNAP VFM+LMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEH
Sbjct: 701 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 760
Query: 121 LHQVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWPRPSTVSE 180
LHQVLETLRAN+LYAKFSKCEFWL+KV+FL HVVSSEG SVDP KI AVTNWPRPSTVSE
Sbjct: 761 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGFSVDPAKIEAVTNWPRPSTVSE 820
Query: 181 IRSLLGLAGYYRRFVEDFSHIAS-LDPVDQEGNPFCLEPS 220
IRS LGLAGYYRRFVEDFS I S L + ++G PF P+
Sbjct: 821 IRSFLGLAGYYRRFVEDFSRIVSPLTQLTRKGTPFVWSPA 860
BLAST of Cmc11g0298371 vs. NCBI nr
Match:
TYK01306.1 (pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 380.6 bits (976), Expect = 9.5e-102
Identity = 189/220 (85.91%), Postives = 199/220 (90.45%), Query Frame = 0
Query: 1 MHLSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPMTA 60
M L IDYRELNKVTVKN YPLPRIDDLF QLQGATVFSKIDLRSGYHQLRIRDSDIP TA
Sbjct: 601 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTA 660
Query: 61 FNSRYGHYKFIVMSFGLTNAPVVFMNLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 120
F RYGHY+FIVMSFGLTNAP VFM+LMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEH
Sbjct: 661 FRLRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 720
Query: 121 LHQVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWPRPSTVSE 180
LHQVLETLRAN+LYAKFSKCEFWL+KV+FL HVVSSEG+SVDP KI AVTNWPRPSTVSE
Sbjct: 721 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 780
Query: 181 IRSLLGLAGYYRRFVEDFSHIAS-LDPVDQEGNPFCLEPS 220
IRS LGLAGYYRRFVEDFS IAS L + +EG PF P+
Sbjct: 781 IRSFLGLAGYYRRFVEDFSRIASPLTQLTREGTPFVWSPT 820
BLAST of Cmc11g0298371 vs. ExPASy Swiss-Prot
Match:
P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)
HSP 1 Score: 174.9 bits (442), Expect = 1.0e-42
Identity = 76/198 (38.38%), Postives = 127/198 (64.14%), Query Frame = 0
Query: 5 IDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPMTAFNSR 64
IDYR+LN++T+ + YP+P +D++ +L F+ IDL G+HQ+ + + I TAF+++
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324
Query: 65 YGHYKFIVMSFGLTNAPVVFMNLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQV 124
GHY+++ M FGL NAP F MN + + L+ +V++DDI+I+S + EH + V
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLV 384
Query: 125 LETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWPRPSTVSEIRSL 184
L L + KCEF K+ +FL H+V+ +G+ +P K++A+ ++P P+ EIR+
Sbjct: 385 FTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAF 444
Query: 185 LGLAGYYRRFVEDFSHIA 203
LGL GYYR+F+ +++ IA
Sbjct: 445 LGLTGYYRKFIPNYADIA 462
BLAST of Cmc11g0298371 vs. ExPASy Swiss-Prot
Match:
P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)
HSP 1 Score: 172.2 bits (435), Expect = 6.7e-42
Identity = 76/198 (38.38%), Postives = 127/198 (64.14%), Query Frame = 0
Query: 5 IDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPMTAFNSR 64
IDYR+LN++TV + +P+P +D++ +L F+ IDL G+HQ+ + + TAF+++
Sbjct: 266 IDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTK 325
Query: 65 YGHYKFIVMSFGLTNAPVVFMNLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQV 124
+GHY+++ M FGL NAP F MN + + L+ +V++DDI+++S + EH + L V
Sbjct: 326 HGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLV 385
Query: 125 LETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWPRPSTVSEIRSL 184
E L L + KCEF ++ +FL HV++ +G+ +P KI A+ +P P+ EI++
Sbjct: 386 FEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAF 445
Query: 185 LGLAGYYRRFVEDFSHIA 203
LGL GYYR+F+ +F+ IA
Sbjct: 446 LGLTGYYRKFIPNFADIA 463
BLAST of Cmc11g0298371 vs. ExPASy Swiss-Prot
Match:
Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 6.3e-40
Identity = 71/198 (35.86%), Postives = 127/198 (64.14%), Query Frame = 0
Query: 5 IDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPMTAFNSR 64
+D++ LN VT+ + YP+P I+ L A F+ +DL SG+HQ+ +++SDIP TAF++
Sbjct: 182 VDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTL 241
Query: 65 YGHYKFIVMSFGLTNAPVVFMNLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQV 124
G Y+F+ + FGL NAP +F +++ + ++ + V+IDDI+++S+ H ++L V
Sbjct: 242 NGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLV 301
Query: 125 LETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWPRPSTVSEIRSL 184
L +L L K F +V FL ++V+++G+ DP K+RA++ P P++V E++
Sbjct: 302 LASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRF 361
Query: 185 LGLAGYYRRFVEDFSHIA 203
LG+ YYR+F++D++ +A
Sbjct: 362 LGMTSYYRKFIQDYAKVA 379
BLAST of Cmc11g0298371 vs. ExPASy Swiss-Prot
Match:
Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)
HSP 1 Score: 161.4 bits (407), Expect = 1.2e-38
Identity = 82/200 (41.00%), Postives = 121/200 (60.50%), Query Frame = 0
Query: 3 LSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPMTAFN 62
L +DYR LNK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ + D TAF
Sbjct: 648 LCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFV 707
Query: 63 SRYGHYKFIVMSFGLTNAPVVFMNLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 122
+ G Y++ VM FGL NAP F M F+D FV V++DDILI+S++ EH +HL
Sbjct: 708 TPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLD 767
Query: 123 QVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWPRPSTVSEIR 182
VLE L+ L K KC+F ++ FL + + + ++ K A+ ++P P TV + +
Sbjct: 768 TVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQ 827
Query: 183 SLLGLAGYYRRFVEDFSHIA 203
LG+ YYRRF+ + S IA
Sbjct: 828 RFLGMINYYRRFIPNCSKIA 845
BLAST of Cmc11g0298371 vs. ExPASy Swiss-Prot
Match:
Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)
HSP 1 Score: 161.4 bits (407), Expect = 1.2e-38
Identity = 82/200 (41.00%), Postives = 121/200 (60.50%), Query Frame = 0
Query: 3 LSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPMTAFN 62
L +DYR LNK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ + D TAF
Sbjct: 674 LCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFV 733
Query: 63 SRYGHYKFIVMSFGLTNAPVVFMNLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 122
+ G Y++ VM FGL NAP F M F+D FV V++DDILI+S++ EH +HL
Sbjct: 734 TPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLD 793
Query: 123 QVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWPRPSTVSEIR 182
VLE L+ L K KC+F ++ FL + + + ++ K A+ ++P P TV + +
Sbjct: 794 TVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQ 853
Query: 183 SLLGLAGYYRRFVEDFSHIA 203
LG+ YYRRF+ + S IA
Sbjct: 854 RFLGMINYYRRFIPNCSKIA 871
BLAST of Cmc11g0298371 vs. ExPASy TrEMBL
Match:
A0A5A7V874 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004590 PE=4 SV=1)
HSP 1 Score: 445.7 bits (1145), Expect = 1.2e-121
Identity = 218/222 (98.20%), Postives = 218/222 (98.20%), Query Frame = 0
Query: 1 MHLSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPMTA 60
MHLSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIP TA
Sbjct: 323 MHLSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPKTA 382
Query: 61 FNSRYGHYKFIVMSFGLTNAPVVFMNLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 120
FNSRYGHYKFIVMSFGLTNAPVVFMNLMN VFKDFLDSFVIVFIDDILIYSKTEAEHEEH
Sbjct: 383 FNSRYGHYKFIVMSFGLTNAPVVFMNLMNNVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 442
Query: 121 LHQVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWPRPSTVSE 180
LHQVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNW RPSTVSE
Sbjct: 443 LHQVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWSRPSTVSE 502
Query: 181 IRSLLGLAGYYRRFVEDFSHIASLDPVDQEGNPFCLEPSLRG 223
IRS LGLAGYYRRFVEDFSHIASLDPVDQEGNPFCLEPSLRG
Sbjct: 503 IRSFLGLAGYYRRFVEDFSHIASLDPVDQEGNPFCLEPSLRG 544
BLAST of Cmc11g0298371 vs. ExPASy TrEMBL
Match:
A0A5D3BZN1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00670 PE=4 SV=1)
HSP 1 Score: 381.3 bits (978), Expect = 2.7e-102
Identity = 188/220 (85.45%), Postives = 200/220 (90.91%), Query Frame = 0
Query: 1 MHLSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPMTA 60
M L IDYRELNKVTVKN YPLPRIDDLF QLQGATVFSKIDLRSGYHQLRIRD DIP TA
Sbjct: 684 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 743
Query: 61 FNSRYGHYKFIVMSFGLTNAPVVFMNLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 120
F SRYGHY+F+VMSFGLTNAP VFM+LMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEH
Sbjct: 744 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 803
Query: 121 LHQVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWPRPSTVSE 180
LHQVLETLRAN+LYAKFSKCEFWL+KV+FL HVVSSEG+SVDPTKI AVTNWPRPSTVSE
Sbjct: 804 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPTKIEAVTNWPRPSTVSE 863
Query: 181 IRSLLGLAGYYRRFVEDFSHIAS-LDPVDQEGNPFCLEPS 220
IRS LGLAGYYRRFVEDFS IAS L + ++G PF P+
Sbjct: 864 IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 903
BLAST of Cmc11g0298371 vs. ExPASy TrEMBL
Match:
A0A5A7SSL3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00540 PE=4 SV=1)
HSP 1 Score: 380.9 bits (977), Expect = 3.5e-102
Identity = 188/220 (85.45%), Postives = 199/220 (90.45%), Query Frame = 0
Query: 1 MHLSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPMTA 60
M L IDYRELNKVTVKN YPLPRIDDLF QLQGATVFSKIDLRSGYHQLRIRD DIP TA
Sbjct: 613 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 672
Query: 61 FNSRYGHYKFIVMSFGLTNAPVVFMNLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 120
F SRYGHYKF+VMSFGLTNAP VFM+LMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEH
Sbjct: 673 FRSRYGHYKFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 732
Query: 121 LHQVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWPRPSTVSE 180
LHQVLETLRAN+LYAKFSKCEFWL+KV+FL HVVSSEG+SVDP KI AVTNWPRPSTVSE
Sbjct: 733 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 792
Query: 181 IRSLLGLAGYYRRFVEDFSHIAS-LDPVDQEGNPFCLEPS 220
IRS LGLAGYYRRFVEDFS IAS L + ++G PF P+
Sbjct: 793 IRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 832
BLAST of Cmc11g0298371 vs. ExPASy TrEMBL
Match:
A0A5A7UJ81 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00550 PE=4 SV=1)
HSP 1 Score: 380.6 bits (976), Expect = 4.6e-102
Identity = 187/220 (85.00%), Postives = 198/220 (90.00%), Query Frame = 0
Query: 1 MHLSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPMTA 60
M L IDYRELNKVTVKNHYPLPRIDDLF QLQGATVFSKIDLRSGYHQLRIRD DIP TA
Sbjct: 641 MRLCIDYRELNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 700
Query: 61 FNSRYGHYKFIVMSFGLTNAPVVFMNLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 120
F SRYGHY+F+VMSFGLTNAP VFM+LMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEH
Sbjct: 701 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 760
Query: 121 LHQVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWPRPSTVSE 180
LHQVLETLRAN+LYAKFSKCEFWL+KV+FL HVVSSEG SVDP KI AVTNWPRPSTVSE
Sbjct: 761 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGFSVDPAKIEAVTNWPRPSTVSE 820
Query: 181 IRSLLGLAGYYRRFVEDFSHIAS-LDPVDQEGNPFCLEPS 220
IRS LGLAGYYRRFVEDFS I S L + ++G PF P+
Sbjct: 821 IRSFLGLAGYYRRFVEDFSRIVSPLTQLTRKGTPFVWSPA 860
BLAST of Cmc11g0298371 vs. ExPASy TrEMBL
Match:
A0A5D3BSV9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold827G00060 PE=4 SV=1)
HSP 1 Score: 380.6 bits (976), Expect = 4.6e-102
Identity = 189/220 (85.91%), Postives = 199/220 (90.45%), Query Frame = 0
Query: 1 MHLSIDYRELNKVTVKNHYPLPRIDDLFHQLQGATVFSKIDLRSGYHQLRIRDSDIPMTA 60
M L IDYRELNKVTVKN YPLPRIDDLF QLQGATVFSKIDLRSGYHQLRIRDSDIP TA
Sbjct: 601 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTA 660
Query: 61 FNSRYGHYKFIVMSFGLTNAPVVFMNLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 120
F RYGHY+FIVMSFGLTNAP VFM+LMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEH
Sbjct: 661 FRLRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 720
Query: 121 LHQVLETLRANRLYAKFSKCEFWLKKVSFLEHVVSSEGLSVDPTKIRAVTNWPRPSTVSE 180
LHQVLETLRAN+LYAKFSKCEFWL+KV+FL HVVSSEG+SVDP KI AVTNWPRPSTVSE
Sbjct: 721 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSE 780
Query: 181 IRSLLGLAGYYRRFVEDFSHIAS-LDPVDQEGNPFCLEPS 220
IRS LGLAGYYRRFVEDFS IAS L + +EG PF P+
Sbjct: 781 IRSFLGLAGYYRRFVEDFSRIASPLTQLTREGTPFVWSPT 820
BLAST of Cmc11g0298371 vs. TAIR 10
Match:
ATMG00860.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 81.6 bits (200), Expect = 8.5e-16
Identity = 35/84 (41.67%), Postives = 52/84 (61.90%), Query Frame = 0
Query: 120 HLHQVLETLRANRLYAKFSKCEFWLKKVSFL--EHVVSSEGLSVDPTKIRAVTNWPRPST 179
HL VL+ ++ YA KC F ++++L H++S EG+S DP K+ A+ WP P
Sbjct: 3 HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62
Query: 180 VSEIRSLLGLAGYYRRFVEDFSHI 202
+E+R LGL GYYRRFV+++ I
Sbjct: 63 TTELRGFLGLTGYYRRFVKNYGKI 86
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P20825 | 1.0e-42 | 38.38 | Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... | [more] |
P04323 | 6.7e-42 | 38.38 | Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... | [more] |
Q8I7P9 | 6.3e-40 | 35.86 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... | [more] |
Q99315 | 1.2e-38 | 41.00 | Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
Q7LHG5 | 1.2e-38 | 41.00 | Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7V874 | 1.2e-121 | 98.20 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5D3BZN1 | 2.7e-102 | 85.45 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14... | [more] |
A0A5A7SSL3 | 3.5e-102 | 85.45 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46... | [more] |
A0A5A7UJ81 | 4.6e-102 | 85.00 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31... | [more] |
A0A5D3BSV9 | 4.6e-102 | 85.91 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold82... | [more] |
Match Name | E-value | Identity | Description | |
ATMG00860.1 | 8.5e-16 | 41.67 | DNA/RNA polymerases superfamily protein | [more] |