Cmc11g0298141 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0298141
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 17799635 .. 17801140 (+)
RNA-Seq Expression	Cmc11g0298141
Synteny	Cmc11g0298141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCCCGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGCAGGAGGGTCAAGGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGTGATGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGTCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGGATGGCCCCCACAGAGCTGAAAGAATTAAAGGTGCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCCCCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCATTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAAACAGCATTTGGTTCCAGATATGGACACTGCGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGAAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCTAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCAGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTTTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGTTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAACGATGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGA

mRNA sequence

ATGCTCGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCCCGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGCAGGAGGGTCAAGGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGTGATGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGTCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGGATGGCCCCCACAGAGCTGAAAGAATTAAAGGTGCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCCCCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCATTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAAACAGCATTTGGTTCCAGATATGGACACTGCGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGAAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCTAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCAGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTTTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGTTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAACGATGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGA

Coding sequence (CDS)

ATGCTCGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCCCGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGCAGGAGGGTCAAGGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGTGATGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGTCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGGATGGCCCCCACAGAGCTGAAAGAATTAAAGGTGCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCCCCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCATTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAAACAGCATTTGGTTCCAGATATGGACACTGCGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGAAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCTAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCAGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTTTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGTTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAACGATGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGA

Protein sequence

MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKAGGSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVMRDYPDVFPEELPGLPPHREVEFAIELESGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFGSRYGHCEFIVMSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATMVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRR

Homology

[Close]

BLAST of Cmc11g0298141 vs. NCBI nr
Match: KAA0031931.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 981.5 bits (2536), Expect = 2.7e-282
Identity = 486/501 (97.01%), Postives = 492/501 (98.20%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKAGGSRSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFK GGSRSLPQVISAIRASKLL
Sbjct: 826  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 885

Query: 61   SQGTWGILASVVDTREVDVSLSSEPVMRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 120
            SQGTWGILASVVDTREVDVSLSSEPV+RDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 886  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 945

Query: 121  SRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAP ELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 946  SRAPYRMAPAELKELKVQLQELLDKGFIRPSMSPWGAPVLFVKKKDGSMRLCIDYRELNK 1005

Query: 181  VTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFGSRYGHCEFIV 240
            VT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAF SRYGH EFIV
Sbjct: 1006 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 1065

Query: 241  MSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 300
            MSFGLTNAPAVFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK
Sbjct: 1066 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 1125

Query: 301  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 1126 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1185

Query: 361  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSD 420
            RFVENFSRIA PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSF+IYSD
Sbjct: 1186 RFVENFSRIAAPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFVIYSD 1245

Query: 421  ASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATMVFALKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVV YASRQLKSHEQNYPTHDLELA +VFALKIWRHYLYGEKIQIF
Sbjct: 1246 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1305

Query: 481  TDHKSLKYFFTQKELNMRQRR 502
            TDHKSLKYFFTQKELNMRQRR
Sbjct: 1306 TDHKSLKYFFTQKELNMRQRR 1326

[Close]

BLAST of Cmc11g0298141 vs. NCBI nr
Match: KAA0040188.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 980.3 bits (2533), Expect = 6.1e-282
Identity = 485/501 (96.81%), Postives = 492/501 (98.20%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKAGGSRSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFK GGSRSLPQVISAIRASKLL
Sbjct: 579  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 638

Query: 61   SQGTWGILASVVDTREVDVSLSSEPVMRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 120
            SQGTWGILASVVDTREVDVSLSSEPV+RDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 639  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 698

Query: 121  SRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 699  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 758

Query: 181  VTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFGSRYGHCEFIV 240
            VT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAF SRYGH EFIV
Sbjct: 759  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 818

Query: 241  MSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 300
            MSFGLTNAPAVFMDLMNRVF++FLDTFVIVFIDDILIYSK EAEHEEHLRIVLQTLRDNK
Sbjct: 819  MSFGLTNAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKMEAEHEEHLRIVLQTLRDNK 878

Query: 301  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 879  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 938

Query: 361  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSD 420
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF+IYSD
Sbjct: 939  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 998

Query: 421  ASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATMVFALKIWRHYLYGEKIQIF 480
            ASKKGLG VLMQQGKVV YASRQLKSHEQNYPTHDLELA ++FALKIWRHYLYGEKIQIF
Sbjct: 999  ASKKGLGFVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVIFALKIWRHYLYGEKIQIF 1058

Query: 481  TDHKSLKYFFTQKELNMRQRR 502
            TDHKSLKYFFTQKELNMRQRR
Sbjct: 1059 TDHKSLKYFFTQKELNMRQRR 1079

[Close]

BLAST of Cmc11g0298141 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 979.2 bits (2530), Expect = 1.4e-281
Identity = 484/501 (96.61%), Postives = 491/501 (98.00%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKAGGSRSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFK GGS+SLPQVISAIRASKLL
Sbjct: 708  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 767

Query: 61   SQGTWGILASVVDTREVDVSLSSEPVMRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 120
            SQGTWGILASVVDTRE DVSLSSEPV+RDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 768  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 827

Query: 121  SRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 828  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 887

Query: 181  VTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFGSRYGHCEFIV 240
            VT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGH EFIV
Sbjct: 888  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 947

Query: 241  MSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 300
            MSFGLTNAPAVFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 948  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 1007

Query: 301  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 1008 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1067

Query: 361  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSD 420
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSF+IYSD
Sbjct: 1068 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 1127

Query: 421  ASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATMVFALKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVV YASRQLKSHEQNYPTHDLELA +VFALKIWRHYLYGEKIQIF
Sbjct: 1128 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1187

Query: 481  TDHKSLKYFFTQKELNMRQRR 502
            TDHKSLKYFFTQKELNMRQRR
Sbjct: 1188 TDHKSLKYFFTQKELNMRQRR 1208

[Close]

BLAST of Cmc11g0298141 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 978.4 bits (2528), Expect = 2.3e-281
Identity = 484/501 (96.61%), Postives = 491/501 (98.00%), Query Frame = 0


Query: 1   MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKAGGSRSLPQVISAIRASKLL 60
           MLDFDVILGMDWLAA+HASIDCSRKEVTFNPPS ASFKFK GGSRSLPQVISAIRASKLL
Sbjct: 454 MLDFDVILGMDWLAAHHASIDCSRKEVTFNPPSRASFKFKGGGSRSLPQVISAIRASKLL 513

Query: 61  SQGTWGILASVVDTREVDVSLSSEPVMRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 120
           SQGTWGILASVVDTRE DVSLSSEPV+RDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 514 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 573

Query: 121 SRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 574 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 633

Query: 181 VTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFGSRYGHCEFIV 240
           VT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGH EFIV
Sbjct: 634 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 693

Query: 241 MSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 300
           MSFGLTNAPAVFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 694 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 753

Query: 301 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
           LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 754 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 813

Query: 361 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSD 420
           RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF+IYSD
Sbjct: 814 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 873

Query: 421 ASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATMVFALKIWRHYLYGEKIQIF 480
           ASKKGLGCVLMQQGKVV YASRQLKSHEQNYPTHDLELA +VFALKIWRHYLYGEKIQIF
Sbjct: 874 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 933

Query: 481 TDHKSLKYFFTQKELNMRQRR 502
           TDHKSLKYFFTQKELNMRQRR
Sbjct: 934 TDHKSLKYFFTQKELNMRQRR 954

[Close]

BLAST of Cmc11g0298141 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 976.9 bits (2524), Expect = 6.8e-281
Identity = 483/501 (96.41%), Postives = 490/501 (97.80%), Query Frame = 0


Query: 1   MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKAGGSRSLPQVISAIRASKLL 60
           MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFK GGS+SLPQVISAIRASKLL
Sbjct: 488 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 547

Query: 61  SQGTWGILASVVDTREVDVSLSSEPVMRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 120
           SQGTWGILASVVDTREVDVSLS EPV+RDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 548 SQGTWGILASVVDTREVDVSLSLEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 607

Query: 121 SRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 608 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 667

Query: 181 VTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFGSRYGHCEFIV 240
           VT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGH EFIV
Sbjct: 668 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 727

Query: 241 MSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 300
           MSFGLTNAPAVFMDLMNRVFR+FLDTFVIVFIDDILIYSKTE EHEEHLR+VLQTLRDNK
Sbjct: 728 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNK 787

Query: 301 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
           LYAKF KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 788 LYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 847

Query: 361 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSD 420
           RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF+IYSD
Sbjct: 848 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 907

Query: 421 ASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATMVFALKIWRHYLYGEKIQIF 480
           ASKKGLGCVLMQQGKVV YASRQLKSHEQNYPTHDLELA +VFALKIWRHYLYGEKIQIF
Sbjct: 908 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 967

Query: 481 TDHKSLKYFFTQKELNMRQRR 502
           TDHKSLKYFFTQKELNMRQRR
Sbjct: 968 TDHKSLKYFFTQKELNMRQRR 988

[Close]

BLAST of Cmc11g0298141 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.1e-79
Identity = 148/389 (38.05%), Postives = 230/389 (59.13%), Query Frame = 0


Query: 119 PISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCI 178
           PI    Y +A T   E++ Q+QE+L++G IR S SP+ +P   V KK         R+ I
Sbjct: 206 PIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVI 265

Query: 179 DYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFGSRY 238
           DYR+LN++TI +RYP+P +D++  +L     F+ IDL  G+HQ+ + +  + KTAF ++ 
Sbjct: 266 DYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKS 325

Query: 239 GHCEFIVMSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEHLRIVL 298
           GH E++ M FGL NAPA F   MN + R  L+   +V++DDI+I+S +  EH   +++V 
Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVF 385

Query: 299 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 358
             L D  L  +  KCEF  K+ +FLGH+V+  G+  +P K++A+  +  P+   E+R+FL
Sbjct: 386 TKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFL 445

Query: 359 GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGS 418
           GL GYYR+F+ N++ IA P+T   +K       K    ++F+ LK  ++  P+L +PD  
Sbjct: 446 GLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFE 505

Query: 419 GSFLIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATMVFALKIWRHYL 478
             F++ +DAS   LG VL Q G  + + SR L  HE NY   + EL  +V+A K +RHYL
Sbjct: 506 KKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYL 565

Query: 479 YGEKIQIFTDHKSLKYFFTQKELNMRQRR 502
            G +  I +DH+ L++    KE   +  R
Sbjct: 566 LGRQFLIASDHQPLRWLHNLKEPGAKLER 594

[Close]

BLAST of Cmc11g0298141 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 4.5e-78
Identity = 176/512 (34.38%), Postives = 282/512 (55.08%), Query Frame = 0


Query: 3   DFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKAGGSRSLPQVISAIRASKLLSQ 62
           ++D++LG   LA   A+I    +EVT         +  A   +S  Q ++ I  + L   
Sbjct: 89  NYDLLLGRKLLAEAKATISYRDQEVTLYNNKYKLIEGIATHEQSHFQNVNMIPDTMLRQP 148

Query: 63  GTWG-ILASVVDTREVDVSLSSE------PVMRDYPDVFPEELPGLPPHREVEFAIELES 122
                IL S +   E    L++E       +++ Y D+   E   L    + +  I  + 
Sbjct: 149 NKISPILESDLYRLE---HLNNEEKQRLCALLQKYHDIQYHEGDKLTFTNQTKHTINTKH 208

Query: 123 GTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MR 182
                S+  Y  A  +  E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R
Sbjct: 209 NLPLYSKYSYPQAYEQ--EVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFR 268

Query: 183 LCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFG 242
           + IDYR+LN++T+ +R+P+P +D++  +L     F+ IDL  G+HQ+ +    V KTAF 
Sbjct: 269 IVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFS 328

Query: 243 SRYGHCEFIVMSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEHLR 302
           +++GH E++ M FGL NAPA F   MN + R  L+   +V++DDI+++S +  EH + L 
Sbjct: 329 TKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLG 388

Query: 303 IVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR 362
           +V + L    L  +  KCEF  ++ +FLGHV++  G+  +P KIEA+  +  P+   E++
Sbjct: 389 LVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIK 448

Query: 363 SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTVP 422
           +FLGL GYYR+F+ NF+ IA P+T+  +K      +    DS F+ LK  +   P+L VP
Sbjct: 449 AFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVP 508

Query: 423 DGSGSFLIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATMVFALKIWR 482
           D +  F + +DAS   LG VL Q G  + Y SR L  HE NY T + EL  +V+A K +R
Sbjct: 509 DFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFR 568

Query: 483 HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRR 502
           HYL G   +I +DH+ L + +  K+ N +  R
Sbjct: 569 HYLLGRHFEISSDHQPLSWLYRMKDPNSKLTR 595

[Close]

BLAST of Cmc11g0298141 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.7e-72
Identity = 144/398 (36.18%), Postives = 231/398 (58.04%), Query Frame = 0


Query: 96  EELPGLPPHREVEFAIELESGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPW 155
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 156 GAPVLFVKKKDGSMRLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 215
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 216 QLRIKDGDVPKTAFGSRYGHCEFIVMSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDI 275
            +R++ GD  K AF    G  E++VM +G++ APA F   +N +  +  ++ V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 276 LIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 335
           LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 336 AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN 395
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 396 LKQKLVTAPVLTVPDGSGSFLIYSDASKKGLGCVLMQQGK-----VVVYASRQLKSHEQN 455
           +KQ LV+ PVL   D S   L+ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 456 YPTHDLELATMVFALKIWRHYLYG--EKIQIFTDHKSL 487
           Y   D E+  ++ +LK WRHYL    E  +I TDH++L
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

[Close]

BLAST of Cmc11g0298141 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.7e-72
Identity = 144/398 (36.18%), Postives = 231/398 (58.04%), Query Frame = 0


Query: 96  EELPGLPPHREVEFAIELESGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPW 155
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 156 GAPVLFVKKKDGSMRLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 215
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 216 QLRIKDGDVPKTAFGSRYGHCEFIVMSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDI 275
            +R++ GD  K AF    G  E++VM +G++ APA F   +N +  +  ++ V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 276 LIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 335
           LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 336 AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN 395
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 396 LKQKLVTAPVLTVPDGSGSFLIYSDASKKGLGCVLMQQGK-----VVVYASRQLKSHEQN 455
           +KQ LV+ PVL   D S   L+ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 456 YPTHDLELATMVFALKIWRHYLYG--EKIQIFTDHKSL 487
           Y   D E+  ++ +LK WRHYL    E  +I TDH++L
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

[Close]

BLAST of Cmc11g0298141 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.7e-72
Identity = 144/398 (36.18%), Postives = 231/398 (58.04%), Query Frame = 0


Query: 96  EELPGLPPHREVEFAIELESGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPW 155
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 156 GAPVLFVKKKDGSMRLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 215
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 216 QLRIKDGDVPKTAFGSRYGHCEFIVMSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDI 275
            +R++ GD  K AF    G  E++VM +G++ APA F   +N +  +  ++ V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 276 LIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 335
           LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 336 AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN 395
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 396 LKQKLVTAPVLTVPDGSGSFLIYSDASKKGLGCVLMQQGK-----VVVYASRQLKSHEQN 455
           +KQ LV+ PVL   D S   L+ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 456 YPTHDLELATMVFALKIWRHYLYG--EKIQIFTDHKSL 487
           Y   D E+  ++ +LK WRHYL    E  +I TDH++L
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

[Close]

BLAST of Cmc11g0298141 vs. ExPASy TrEMBL
Match: A0A5A7SQU8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00040 PE=4 SV=1)

HSP 1 Score: 981.5 bits (2536), Expect = 1.3e-282
Identity = 486/501 (97.01%), Postives = 492/501 (98.20%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKAGGSRSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFK GGSRSLPQVISAIRASKLL
Sbjct: 826  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 885

Query: 61   SQGTWGILASVVDTREVDVSLSSEPVMRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 120
            SQGTWGILASVVDTREVDVSLSSEPV+RDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 886  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 945

Query: 121  SRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAP ELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 946  SRAPYRMAPAELKELKVQLQELLDKGFIRPSMSPWGAPVLFVKKKDGSMRLCIDYRELNK 1005

Query: 181  VTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFGSRYGHCEFIV 240
            VT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAF SRYGH EFIV
Sbjct: 1006 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 1065

Query: 241  MSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 300
            MSFGLTNAPAVFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK
Sbjct: 1066 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 1125

Query: 301  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 1126 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1185

Query: 361  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSD 420
            RFVENFSRIA PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSF+IYSD
Sbjct: 1186 RFVENFSRIAAPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFVIYSD 1245

Query: 421  ASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATMVFALKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVV YASRQLKSHEQNYPTHDLELA +VFALKIWRHYLYGEKIQIF
Sbjct: 1246 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1305

Query: 481  TDHKSLKYFFTQKELNMRQRR 502
            TDHKSLKYFFTQKELNMRQRR
Sbjct: 1306 TDHKSLKYFFTQKELNMRQRR 1326

[Close]

BLAST of Cmc11g0298141 vs. ExPASy TrEMBL
Match: A0A5A7TB42 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold118G00260 PE=4 SV=1)

HSP 1 Score: 980.3 bits (2533), Expect = 3.0e-282
Identity = 485/501 (96.81%), Postives = 492/501 (98.20%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKAGGSRSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFK GGSRSLPQVISAIRASKLL
Sbjct: 579  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 638

Query: 61   SQGTWGILASVVDTREVDVSLSSEPVMRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 120
            SQGTWGILASVVDTREVDVSLSSEPV+RDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 639  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 698

Query: 121  SRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 699  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 758

Query: 181  VTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFGSRYGHCEFIV 240
            VT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAF SRYGH EFIV
Sbjct: 759  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 818

Query: 241  MSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 300
            MSFGLTNAPAVFMDLMNRVF++FLDTFVIVFIDDILIYSK EAEHEEHLRIVLQTLRDNK
Sbjct: 819  MSFGLTNAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKMEAEHEEHLRIVLQTLRDNK 878

Query: 301  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 879  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 938

Query: 361  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSD 420
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF+IYSD
Sbjct: 939  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 998

Query: 421  ASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATMVFALKIWRHYLYGEKIQIF 480
            ASKKGLG VLMQQGKVV YASRQLKSHEQNYPTHDLELA ++FALKIWRHYLYGEKIQIF
Sbjct: 999  ASKKGLGFVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVIFALKIWRHYLYGEKIQIF 1058

Query: 481  TDHKSLKYFFTQKELNMRQRR 502
            TDHKSLKYFFTQKELNMRQRR
Sbjct: 1059 TDHKSLKYFFTQKELNMRQRR 1079

[Close]

BLAST of Cmc11g0298141 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 979.2 bits (2530), Expect = 6.6e-282
Identity = 484/501 (96.61%), Postives = 491/501 (98.00%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKAGGSRSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFK GGS+SLPQVISAIRASKLL
Sbjct: 708  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 767

Query: 61   SQGTWGILASVVDTREVDVSLSSEPVMRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 120
            SQGTWGILASVVDTRE DVSLSSEPV+RDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 768  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 827

Query: 121  SRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 828  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 887

Query: 181  VTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFGSRYGHCEFIV 240
            VT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGH EFIV
Sbjct: 888  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 947

Query: 241  MSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 300
            MSFGLTNAPAVFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 948  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 1007

Query: 301  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 1008 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1067

Query: 361  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSD 420
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSF+IYSD
Sbjct: 1068 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 1127

Query: 421  ASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATMVFALKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVV YASRQLKSHEQNYPTHDLELA +VFALKIWRHYLYGEKIQIF
Sbjct: 1128 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1187

Query: 481  TDHKSLKYFFTQKELNMRQRR 502
            TDHKSLKYFFTQKELNMRQRR
Sbjct: 1188 TDHKSLKYFFTQKELNMRQRR 1208

[Close]

BLAST of Cmc11g0298141 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 978.4 bits (2528), Expect = 1.1e-281
Identity = 484/501 (96.61%), Postives = 491/501 (98.00%), Query Frame = 0


Query: 1   MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKAGGSRSLPQVISAIRASKLL 60
           MLDFDVILGMDWLAA+HASIDCSRKEVTFNPPS ASFKFK GGSRSLPQVISAIRASKLL
Sbjct: 454 MLDFDVILGMDWLAAHHASIDCSRKEVTFNPPSRASFKFKGGGSRSLPQVISAIRASKLL 513

Query: 61  SQGTWGILASVVDTREVDVSLSSEPVMRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 120
           SQGTWGILASVVDTRE DVSLSSEPV+RDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 514 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 573

Query: 121 SRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 574 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 633

Query: 181 VTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFGSRYGHCEFIV 240
           VT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGH EFIV
Sbjct: 634 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 693

Query: 241 MSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 300
           MSFGLTNAPAVFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 694 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 753

Query: 301 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
           LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 754 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 813

Query: 361 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSD 420
           RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF+IYSD
Sbjct: 814 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 873

Query: 421 ASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATMVFALKIWRHYLYGEKIQIF 480
           ASKKGLGCVLMQQGKVV YASRQLKSHEQNYPTHDLELA +VFALKIWRHYLYGEKIQIF
Sbjct: 874 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 933

Query: 481 TDHKSLKYFFTQKELNMRQRR 502
           TDHKSLKYFFTQKELNMRQRR
Sbjct: 934 TDHKSLKYFFTQKELNMRQRR 954

[Close]

BLAST of Cmc11g0298141 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 976.9 bits (2524), Expect = 3.3e-281
Identity = 483/501 (96.41%), Postives = 490/501 (97.80%), Query Frame = 0


Query: 1   MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKAGGSRSLPQVISAIRASKLL 60
           MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFK GGS+SLPQVISAIRASKLL
Sbjct: 488 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 547

Query: 61  SQGTWGILASVVDTREVDVSLSSEPVMRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 120
           SQGTWGILASVVDTREVDVSLS EPV+RDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 548 SQGTWGILASVVDTREVDVSLSLEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 607

Query: 121 SRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 608 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 667

Query: 181 VTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFGSRYGHCEFIV 240
           VT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGH EFIV
Sbjct: 668 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 727

Query: 241 MSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 300
           MSFGLTNAPAVFMDLMNRVFR+FLDTFVIVFIDDILIYSKTE EHEEHLR+VLQTLRDNK
Sbjct: 728 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNK 787

Query: 301 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
           LYAKF KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 788 LYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 847

Query: 361 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSD 420
           RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF+IYSD
Sbjct: 848 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 907

Query: 421 ASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATMVFALKIWRHYLYGEKIQIF 480
           ASKKGLGCVLMQQGKVV YASRQLKSHEQNYPTHDLELA +VFALKIWRHYLYGEKIQIF
Sbjct: 908 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 967

Query: 481 TDHKSLKYFFTQKELNMRQRR 502
           TDHKSLKYFFTQKELNMRQRR
Sbjct: 968 TDHKSLKYFFTQKELNMRQRR 988

[Close]

BLAST of Cmc11g0298141 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 120.6 bits (301), Expect = 3.7e-27
Identity = 57/125 (45.60%), Postives = 81/125 (64.80%), Query Frame = 0


Query: 288 HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPST 347
           HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 348 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV 407
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 408 LTVPD 411
           L +PD
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:

BLAST of Cmc11g0298141 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031931.1	2.7e-282	97.01	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040188.1	6.1e-282	96.81	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	1.4e-281	96.61	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	2.3e-281	96.61	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037244.1	6.8e-281	96.41	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0298141 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	3.1e-79	38.05	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	4.5e-78	34.38	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P0CT41	3.7e-72	36.18	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.7e-72	36.18	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.7e-72	36.18	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0298141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SQU8	1.3e-282	97.01	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7TB42	3.0e-282	96.81	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11...	[more]
A0A5D3BPI1	6.6e-282	96.61	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7U330	1.1e-281	96.61	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7T190	3.3e-281	96.41	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37...	[more]

BLAST of Cmc11g0298141 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	3.7e-27	45.60	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 332..414 e-value: 5.1E-31 score: 108.5
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 187..322 e-value: 5.8E-92 score: 308.8
None	No IPR available	PFAM	PF08284	RVP_2	coord: 2..31 e-value: 7.4E-9 score: 35.5
None	No IPR available	GENE3D	3.10.20.370		coord: 415..480 e-value: 6.2E-7 score: 31.3
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 108..247 e-value: 5.8E-92 score: 308.8
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 119..493
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 119..493
None	No IPR available	CDD	cd01647	RT_LTR	coord: 146..322 e-value: 1.21998E-95 score: 285.258
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 417..501 e-value: 1.13352E-38 score: 134.928
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 162..321 e-value: 1.6E-28 score: 99.7
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 143..322 score: 10.495038
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..38 e-value: 2.7E-6 score: 29.0
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 385..479 e-value: 2.0E-30 score: 104.8
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 86..501

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0298141.1	Cmc11g0298141.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding