Cmc11g0297651 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0297651
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPeroxisomal membrane protein 2
LocationCMiso1.1chr11: 17057297 .. 17059695 (+)
RNA-Seq ExpressionCmc11g0297651
SyntenyCmc11g0297651
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACAAGATGTGGGAAATGGGATCCATTTGAAATGTGTTCGTAAAGCTGGATGATATGATGACAAGAGATCCTTCTTGTCTAGGGACGAATTTTCCAACATCCCACACCGTCCTCAGCCTCAGATCTACTTCATTCTATTCTATTTCCTGTTCCTGCACCTCTAAGCTTCGTTAATGGCGAAACTGGAGTCGCTTGACGGGGTAGCCAAAGATAACAATGTGTCTACAAAGAAGCAGAAGAGAAATCATGGGTCTACTTCATTTTTCGTCTTCGTGGACTACCTTTTCCTATTCATCTTTTTTGGGTTCCTCTGCTTCATCCTCTTCAAGATGTTCGGTGTCTGAGATTCCCCAAATACACAGAGTTTCACATTCCATTTTGAAGATTAGGTTTTAATTTTCTTTCTTTCGATTTTACTTTATCATGCCCATGTGATTCTTGATACACGTATGGTGGGGTGGGGGTGCAATTGTTTGTGGGCTACTTATGTTTATGATATTTGGGAGCTCAGCGTTGCATTTTGATTGAAAACCAAACCCCAATACCCATCCTTCTAGTGTTAATTTTCCAACCCTTCAAAACTTTGGGAGGACGAAATTATTTCTTTGACCTGTTTCACTCCAATTCTGTTAACGTTTTTTCCGAATGTTATCTTTTTGGGGTTCCCCAAATGTTGACCTCCAGTGTCTTACCCTGCTGTTCGTTCCCATCAAAGTAGCTGTAAATTTATTGCTGCAATCTTAATTGACTTCTTTACGATTCTTAAATTCAACATGATAGCCAAATGCAGGAAATTCAGTTCCGTTGAAAGTACAGATTTGATTCTTACACTTACAAGGAGGAATGATCTAGATTAGGCTGTATCATTTTCTCTTTGTAAGTGCTTGATTTTCTTTTCTTTCTTGATCTAGTTTGGTTCTCTGAATTCCCTTGTTTCAATTGTACCTGTTTTTTTACACGATTAATTAACATCATCATAAAGATTCACGTTTGGTGAATAATTGCATTAAAGTATTGAATTAGACTTTGTCCCCCTAGTGGTCCGAAAGACTATCAATTTTATCAGGATGTCAATTTTCACGTGTTTCTTGATCTTGATTGTTCTAAATGCACCGGATGGGATAATCATTAAACAAATACCTGGATCTAGTCCATGTTTCATATATATTATGCCATACATTTGCTGAGAAATAGGCATCAACATTGTTTTCTCAACTAGATTGATTCTACTTTTAGCGAAAAAGAACATTTTAAATTTGGAATAAGCTCTTTTTATTAAATGAAGCATTAATTATCATACAACTGCAGGTTCATTACTAGACCTCTGCCCCATTAGGACACTAACTCATCAAAGCCAGCTACTTATTTCTCCCTAGATACTTGTATATTCGTAATTCCGTAAAATCGGACTGGATAGAAGAACCATTCAAGTGGCAGATGAACACTGCCGACTTGTTCTGATGATTATTGCTAGATGAACTCAAGGATAGGATGTTTCTTTAACACCACCAATATTGGCAGGGATTGGCACCTCATATCCAGGATTTGGAATGAAATTATCATCCCCACCTGGAATATATTGACGTTTTGGAGCTGGGTTACTGCCATATGAACTCGAATGCCCTCCTCCATGGCTGCCTTTGTCGTATGGTGACAATGTGATGCGTCCAATGCCAGGAATTAGCACACTGACCCTATCATATCCAATCAGCCATTAAGGCTGTTTCTTATCATCATCACTGCTCGACCTTTCAGGAAAATCACGTGCTGCAACTGCTTCTCCAGTCATTGCGAGGATCACAAGGAAGATAGGGAACAGAGAAGGTGTGATTCTGTGAGCCATTTATCTGATATTGTGAGTAATGCCAGAGAAGTTTTGTTTGGTGATGAAGAAACAAGAAGAATAGAGGTGTTCTTATAGATACGAGGAAGATGAACTGAGAAGGAGAGTGGTAGATGAAGTTTTGGCGGTGAGTTAAAACGAGATAGTTGCTCCATTTATTGGATTTAGAATGGTAGGTTGAAAAATATAACTGGTAAAGTATGAACGGATGGAGAGAACAAATGGAAGAAAGGGTTGGAATCTTTTCATATGAACAATAACTTGAAGTAATGAAACAAGGTGTCTGGCATTCCTTGTAAACACTTAAAACCAGGCTACAAAGAGTTTGGTAACTCCTCAACAGCTATTACGGCTTATAAATGTAATGAGACGTTTCGTCAGAATGTTAAAAACATGAAGCAACTTTCTGTTAATGGATGAAGGATAAGTCCCTGTAAAACAGACAGTTCACTATATCGAAGTGTAATTAAAACAGTATTGAGGATAAACAAAATTGTTCAAAATATAGCAAGCTATACTTCAAAAATGAGTTTTATTTTGAACATTTTAATCTTGA

mRNA sequence

TACAAGATGTGGGAAATGGGATCCATTTGAAATGTGTTCGTAAAGCTGGATGATATGATGACAAGAGATCCTTCTTGTCTAGGGACGAATTTTCCAACATCCCACACCGTCCTCAGCCTCAGATCTACTTCATTCTATTCTATTTCCTGTTCCTGCACCTCTAAGCTTCGTTAATGGCGAAACTGGAGTCGCTTGACGGGGTAGCCAAAGATAACAATGTGTCTACAAAGAAGCAGAAGAGAAATCATGGGTCTACTTCATTTTTCGTCTTCGTGGACTACCTTTTCCTATTCATCTTTTTTGGGTTCCTCTGCTTCATCCTCTTCAAGATGTTCGGTGTCTGAGATTCCCCAAATACACAGAGTTTCACATTCCATTTTGAAGATTAGGTTCATTACTAGACCTCTGCCCCATTAGGACACTAACTCATCAAAGCCAGCTACTTATTTCTCCCTAGATACTTGTATATTCGTAATTCCGTAAAATCGGACTGGATAGAAGAACCATTCAAGTGGCAGATGAACACTGCCGACTTGTTCTGATGATTATTGCTAGATGAACTCAAGGATAGGATGTTTCTTTAACACCACCAATATTGGCAGGGATTGGCACCTCATATCCAGGATTTGGAATGAAATTATCATCCCCACCTGGAATATATTGACGTTTTGGAGCTGGGTTACTGCCATATGAACTCGAATGCCCTCCTCCATGGCTGCCTTTGTCGTATGGTGACAATGTGATGCGTCCAATGCCAGGAATTAGCACACTGACCCTATCATATCCAATCAGCCATTAAGGCTGTTTCTTATCATCATCACTGCTCGACCTTTCAGGAAAATCACGTGCTGCAACTGCTTCTCCAGTCATTGCGAGGATCACAAGGAAGATAGGGAACAGAGAAGGTGTGATTCTGTGAGCCATTTATCTGATATTGTGAGTAATGCCAGAGAAGTTTTGTTTGGTGATGAAGAAACAAGAAGAATAGAGGTGTTCTTATAGATACGAGGAAGATGAACTGAGAAGGAGAGTGGTAGATGAAGTTTTGGCGGTGAGTTAAAACGAGATAGTTGCTCCATTTATTGGATTTAGAATGGTAGGTTGAAAAATATAACTGGTAAAGTATGAACGGATGGAGAGAACAAATGGAAGAAAGGGTTGGAATCTTTTCATATGAACAATAACTTGAAGTAATGAAACAAGGTGTCTGGCATTCCTTGTAAACACTTAAAACCAGGCTACAAAGAGTTTGGTAACTCCTCAACAGCTATTACGGCTTATAAATGTAATGAGACGTTTCGTCAGAATGTTAAAAACATGAAGCAACTTTCTGTTAATGGATGAAGGATAAGTCCCTGTAAAACAGACAGTTCACTATATCGAAGTGTAATTAAAACAGTATTGAGGATAAACAAAATTGTTCAAAATATAGCAAGCTATACTTCAAAAATGAGTTTTATTTTGAACATTTTAATCTTGA

Coding sequence (CDS)

ATGGCGAAACTGGAGTCGCTTGACGGGGTAGCCAAAGATAACAATGTGTCTACAAAGAAGCAGAAGAGAAATCATGGGTCTACTTCATTTTTCGTCTTCGTGGACTACCTTTTCCTATTCATCTTTTTTGGGTTCCTCTGCTTCATCCTCTTCAAGATGTTCGGTGTCTGA

Protein sequence

MAKLESLDGVAKDNNVSTKKQKRNHGSTSFFVFVDYLFLFIFFGFLCFILFKMFGV
Homology
[Close]
BLAST of Cmc11g0297651 vs. NCBI nr
Match: KAG8641474.1 (hypothetical protein MANES_13G149401v8 [Manihot esculenta])

HSP 1 Score: 80.1 bits (196), Expect = 6.7e-12
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 1  MAKLESLDGVAKDNNVSTKKQKRNHGSTSFFVFVDYLFLFIFFGFLCFILFKMFGV 57
          MAKLE LD   K  N++ KK+KRNHGST+FFVFVDYLFLFIF GFLCFILFKM G+
Sbjct: 1  MAKLEQLDDEPKQLNINIKKKKRNHGSTTFFVFVDYLFLFIFLGFLCFILFKMVGI 56

[Close]
BLAST of Cmc11g0297651 vs. NCBI nr
Match: KAG5020934.1 (hypothetical protein JHK87_016789 [Glycine soja] >KAG5033284.1 hypothetical protein JHK85_017266 [Glycine max] >KAG5047487.1 hypothetical protein JHK86_016893 [Glycine max] >KAG5149968.1 hypothetical protein JHK82_016849 [Glycine max] >KHN31947.1 hypothetical protein glysoja_025781 [Glycine soja])

HSP 1 Score: 67.4 bits (163), Expect = 4.5e-08
Identity = 37/56 (66.07%), Postives = 44/56 (78.57%), Query Frame = 0 

Query: 1  MAKLESLDGVAKDNNVSTKKQKRNHGSTSFFVFVDYLFLFIFFGFLCFILFKMFGV 57
          MAKLE +     DN+VS  K+KRNHGST FFVFVDYL+L IF GFLCFI+FK+ G+
Sbjct: 1  MAKLEEI-----DNSVSKTKKKRNHGSTGFFVFVDYLYLLIFLGFLCFIIFKIVGI 51

[Close]
BLAST of Cmc11g0297651 vs. NCBI nr
Match: KAB1210041.1 (hypothetical protein CJ030_MR6G019427 [Morella rubra])

HSP 1 Score: 67.4 bits (163), Expect = 4.5e-08
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 0 

Query: 1   MAKLESLDGVAKDNNVSTKKQK---RNHGSTSFFVFVDYLFLFIFFGFLCFILFKM 54
           MAKLE+LD    + N +  + K   RNHGST FFVFVDYLFLFIFFGFLCFILF+M
Sbjct: 62  MAKLEALDEPKDEKNTAHNRNKYKNRNHGSTKFFVFVDYLFLFIFFGFLCFILFQM 117

[Close]
BLAST of Cmc11g0297651 vs. NCBI nr
Match: XP_007132650.1 (hypothetical protein PHAVU_011G113100g [Phaseolus vulgaris] >ESW04644.1 hypothetical protein PHAVU_011G113100g [Phaseolus vulgaris])

HSP 1 Score: 66.6 bits (161), Expect = 7.6e-08
Identity = 37/56 (66.07%), Postives = 44/56 (78.57%), Query Frame = 0 

Query: 1  MAKLESLDGVAKDNNVSTKKQKRNHGSTSFFVFVDYLFLFIFFGFLCFILFKMFGV 57
          MAKLE +     DN+V+  K+KRNHGST FFVFVDYLFLFIF GFLCFI+FK+  +
Sbjct: 1  MAKLEEM-----DNSVAKIKKKRNHGSTRFFVFVDYLFLFIFLGFLCFIIFKIMNI 51

[Close]
BLAST of Cmc11g0297651 vs. NCBI nr
Match: TQD93856.1 (hypothetical protein C1H46_020544 [Malus baccata])

HSP 1 Score: 64.7 bits (156), Expect = 2.9e-07
Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 0 

Query: 1   MAKLESLDGVAKDNNVSTKKQKRNHGSTSFFVFVDYLFLFIFFGFLCFILFKM 54
           MAK+E L   +KD +V+  K+KR+HGST FFVFVDYLFL IFF FLCF++FK+
Sbjct: 406 MAKVEELRQESKDASVAKNKKKRSHGSTEFFVFVDYLFLSIFFAFLCFLIFKI 458

[Close]
BLAST of Cmc11g0297651 vs. ExPASy TrEMBL
Match: A0A0B2RJE1 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_016173 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-08
Identity = 37/56 (66.07%), Postives = 44/56 (78.57%), Query Frame = 0 

Query: 1  MAKLESLDGVAKDNNVSTKKQKRNHGSTSFFVFVDYLFLFIFFGFLCFILFKMFGV 57
          MAKLE +     DN+VS  K+KRNHGST FFVFVDYL+L IF GFLCFI+FK+ G+
Sbjct: 1  MAKLEEI-----DNSVSKTKKKRNHGSTGFFVFVDYLYLLIFLGFLCFIIFKIVGI 51

[Close]
BLAST of Cmc11g0297651 vs. ExPASy TrEMBL
Match: K7KY59 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_06G296400 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-08
Identity = 37/56 (66.07%), Postives = 44/56 (78.57%), Query Frame = 0 

Query: 1  MAKLESLDGVAKDNNVSTKKQKRNHGSTSFFVFVDYLFLFIFFGFLCFILFKMFGV 57
          MAKLE +     DN+VS  K+KRNHGST FFVFVDYL+L IF GFLCFI+FK+ G+
Sbjct: 1  MAKLEEI-----DNSVSKTKKKRNHGSTGFFVFVDYLYLLIFLGFLCFIIFKIVGI 51

[Close]
BLAST of Cmc11g0297651 vs. ExPASy TrEMBL
Match: A0A6A1VBI3 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G019427 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-08
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 0 

Query: 1   MAKLESLDGVAKDNNVSTKKQK---RNHGSTSFFVFVDYLFLFIFFGFLCFILFKM 54
           MAKLE+LD    + N +  + K   RNHGST FFVFVDYLFLFIFFGFLCFILF+M
Sbjct: 62  MAKLEALDEPKDEKNTAHNRNKYKNRNHGSTKFFVFVDYLFLFIFFGFLCFILFQM 117

[Close]
BLAST of Cmc11g0297651 vs. ExPASy TrEMBL
Match: A0A2P2P083 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-08
Identity = 40/56 (71.43%), Postives = 41/56 (73.21%), Query Frame = 0 

Query: 1  MAKLESLDGVAKDNNVSTKKQKRNHGSTSFFVFVDYLFLFIFFGFLCFILFKMFGV 57
          MAKLE LD   K      KK KRNHGST FFVFVDYLFL IF GFLCFILFK+ GV
Sbjct: 1  MAKLELLDNEPKQQKTEDKK-KRNHGSTKFFVFVDYLFLCIFLGFLCFILFKIVGV 55

[Close]
BLAST of Cmc11g0297651 vs. ExPASy TrEMBL
Match: V7AGI2 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G113100g PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.7e-08
Identity = 37/56 (66.07%), Postives = 44/56 (78.57%), Query Frame = 0 

Query: 1  MAKLESLDGVAKDNNVSTKKQKRNHGSTSFFVFVDYLFLFIFFGFLCFILFKMFGV 57
          MAKLE +     DN+V+  K+KRNHGST FFVFVDYLFLFIF GFLCFI+FK+  +
Sbjct: 1  MAKLEEM-----DNSVAKIKKKRNHGSTRFFVFVDYLFLFIFLGFLCFIIFKIMNI 51

The following BLAST results are available for this feature:
BLAST of Cmc11g0297651 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG8641474.16.7e-1275.00hypothetical protein MANES_13G149401v8 [Manihot esculenta][more]
KAG5020934.14.5e-0866.07hypothetical protein JHK87_016789 [Glycine soja] >KAG5033284.1 hypothetical prot... [more]
KAB1210041.14.5e-0867.86hypothetical protein CJ030_MR6G019427 [Morella rubra][more]
XP_007132650.17.6e-0866.07hypothetical protein PHAVU_011G113100g [Phaseolus vulgaris] >ESW04644.1 hypothet... [more]
TQD93856.12.9e-0764.15hypothetical protein C1H46_020544 [Malus baccata][more]
BLAST of Cmc11g0297651 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc11g0297651 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0B2RJE12.2e-0866.07Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_016173 PE=4 SV=1[more]
K7KY592.2e-0866.07Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_06G296400 PE=4 SV=1[more]
A0A6A1VBI32.2e-0867.86Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G019427 PE=4 SV=1[more]
A0A2P2P0832.2e-0871.43Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
V7AGI23.7e-0866.07Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G113100g PE=4 ... [more]
BLAST of Cmc11g0297651 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0297651.1Cmc11g0297651.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane