Cmc11g0297011 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0297011
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 15800086 .. 15801541 (+)
RNA-Seq Expression	Cmc11g0297011
Synteny	Cmc11g0297011

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACAGCGAAGATGGCTTGAGTTAGTAAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATACAGTTAGCCCAGTTGACGGTACAGCCAACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCAGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCATCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAGTGGAAATGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCATTTGATGGAATTTACTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACAAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGTGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGATCTTGAGTTTGAGGTGGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGGTTCGAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCAAAAGTTCATGATGTGTTTCATGTTTCTATGTCGAGGAAGTACGTGCCAGATCCATCCCATGTAG

mRNA sequence

ATGAGACAGCGAAGATGGCTTGAGTTAGTAAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATACAGTTAGCCCAGTTGACGGTACAGCCAACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCAGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCATCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAGTGGAAATGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCATTTGATGGAATTTACTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACAAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGTGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGATCTTGAGTTTGAGGTGGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGGTTCGAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCTACGTGCCAGATCCATCCCATGTAG

Coding sequence (CDS)

ATGAGACAGCGAAGATGGCTTGAGTTAGTAAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATACAGTTAGCCCAGTTGACGGTACAGCCAACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCAGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCATCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAGTGGAAATGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCATTTGATGGAATTTACTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACAAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGTGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGATCTTGAGTTTGAGGTGGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGGTTCGAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCTACGTGCCAGATCCATCCCATGTAG

Protein sequence

MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLATCQIHPM

Homology

[Close]

BLAST of Cmc11g0297011 vs. NCBI nr
Match: KAA0051368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 915.6 bits (2365), Expect = 1.7e-262
Identity = 447/458 (97.60%), Postives = 454/458 (99.13%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
            MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS
Sbjct: 897  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 956

Query: 61   VGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
            VGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFS+SSDGGLLFERRL
Sbjct: 957  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 1016

Query: 121  CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180
            CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQV
Sbjct: 1017 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 1076

Query: 181  KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1077 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1136

Query: 241  TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
            TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 1137 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 1196

Query: 301  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSP 360
            GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYG+CCRSP
Sbjct: 1197 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSP 1256

Query: 361  VCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLK 420
            VCWGEVGEQRLMGPELVQSTN+AIQKIRSRMHTAQ RQKSYADVRRKDLEFE+GDKVFLK
Sbjct: 1257 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLK 1316

Query: 421  VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA 459
            VAPM+GVLRFERRGKLSPRFVGPFEILERIGPVAYRLA
Sbjct: 1317 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA 1354

[Close]

BLAST of Cmc11g0297011 vs. NCBI nr
Match: KAA0047043.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 914.8 bits (2363), Expect = 2.9e-262
Identity = 450/458 (98.25%), Postives = 452/458 (98.69%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
           MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI VS
Sbjct: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVS 60

Query: 61  VGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
           VGAVTIQLA LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 61  VGAVTIQLAHLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 120

Query: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180
           CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV
Sbjct: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180

Query: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240

Query: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSP 360
           GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360

Query: 361 VCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLK 420
           VCWGEVGEQRLMGPELVQS N+AIQKIRSRMHTAQ RQKSYADVRR DLEFEVGDKVFLK
Sbjct: 361 VCWGEVGEQRLMGPELVQSINEAIQKIRSRMHTAQSRQKSYADVRRIDLEFEVGDKVFLK 420

Query: 421 VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA 459
           VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA
Sbjct: 421 VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA 458

[Close]

BLAST of Cmc11g0297011 vs. NCBI nr
Match: KAA0040699.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 912.1 bits (2356), Expect = 1.9e-261
Identity = 447/458 (97.60%), Postives = 454/458 (99.13%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
            MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS
Sbjct: 1050 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 1109

Query: 61   VGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
            VGA+T+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 1110 VGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 1169

Query: 121  CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180
            CVP DSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR+VAEFVSRCLVCQQV
Sbjct: 1170 CVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQV 1229

Query: 181  KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQKPAGLLQPLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1230 KAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1289

Query: 241  TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
            TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG+RLDFSTAFHPQTD
Sbjct: 1290 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTD 1349

Query: 301  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSP 360
            GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 1350 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 1409

Query: 361  VCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLK 420
            VCWGEVGEQRLMGPELVQSTN+AIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLK
Sbjct: 1410 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 1469

Query: 421  VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA 459
            VAPMRGVLRFERR KLSPRFVGPFEILERIGPVAYRLA
Sbjct: 1470 VAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLA 1507

[Close]

BLAST of Cmc11g0297011 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 912.1 bits (2356), Expect = 1.9e-261
Identity = 447/458 (97.60%), Postives = 453/458 (98.91%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
            MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS
Sbjct: 950  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 1009

Query: 61   VGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
            VGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 1010 VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 1069

Query: 121  CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180
            CVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQV
Sbjct: 1070 CVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEFVSRCLVCQQV 1129

Query: 181  KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1130 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1189

Query: 241  TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
            TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTD
Sbjct: 1190 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLDFSTAFHPQTD 1249

Query: 301  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSP 360
            GQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 1250 GQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATIGMAPFEALYGKCCRSP 1309

Query: 361  VCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLK 420
            VCWGEVGEQRLMGPELVQSTN+AIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLK
Sbjct: 1310 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 1369

Query: 421  VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA 459
            VAPMRGVLRFERRGKLSPRF+GPFEILERIGPVAYRLA
Sbjct: 1370 VAPMRGVLRFERRGKLSPRFIGPFEILERIGPVAYRLA 1407

[Close]

BLAST of Cmc11g0297011 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 910.6 bits (2352), Expect = 5.5e-261
Identity = 444/458 (96.94%), Postives = 453/458 (98.91%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
           MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS
Sbjct: 468 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 527

Query: 61  VGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
           VGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 528 VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 587

Query: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180
           CVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQV
Sbjct: 588 CVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQV 647

Query: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 648 KAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 707

Query: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 708 TYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 767

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSP 360
           GQTERLN+VLEDMLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALY KCCRSP
Sbjct: 768 GQTERLNKVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYDKCCRSP 827

Query: 361 VCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLK 420
           +CWGEVGEQRLMGPELVQSTN+AIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLK
Sbjct: 828 ICWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 887

Query: 421 VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA 459
           VAPMRGV+RFERRGKLSPRFVGPFEILERIGPVAYRLA
Sbjct: 888 VAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLA 925

[Close]

BLAST of Cmc11g0297011 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.2e-62
Identity = 144/460 (31.30%), Postives = 237/460 (51.52%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSV 61
            R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR-- 121
                  + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQ 181
            + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGK 241
             K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 301
             + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYG-KCCR 361
            DGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1159

Query: 362  SPVCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKV 421
            SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Sbjct: 1160 SPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1219

Query: 422  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 458
             +K     G L   +  KL+P F GPF +L++ GP  Y L
Sbjct: 1220 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYEL 1235

[Close]

BLAST of Cmc11g0297011 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.2e-62
Identity = 144/460 (31.30%), Postives = 237/460 (51.52%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSV 61
            R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR-- 121
                  + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQ 181
            + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGK 241
             K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 301
             + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYG-KCCR 361
            DGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1159

Query: 362  SPVCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKV 421
            SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Sbjct: 1160 SPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1219

Query: 422  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 458
             +K     G L   +  KL+P F GPF +L++ GP  Y L
Sbjct: 1220 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYEL 1235

[Close]

BLAST of Cmc11g0297011 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.2e-62
Identity = 144/460 (31.30%), Postives = 237/460 (51.52%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSV 61
            R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR-- 121
                  + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQ 181
            + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGK 241
             K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 301
             + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYG-KCCR 361
            DGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1159

Query: 362  SPVCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKV 421
            SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Sbjct: 1160 SPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1219

Query: 422  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 458
             +K     G L   +  KL+P F GPF +L++ GP  Y L
Sbjct: 1220 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYEL 1235

[Close]

BLAST of Cmc11g0297011 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.2e-62
Identity = 144/460 (31.30%), Postives = 237/460 (51.52%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSV 61
            R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR-- 121
                  + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQ 181
            + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGK 241
             K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 301
             + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYG-KCCR 361
            DGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1159

Query: 362  SPVCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKV 421
            SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Sbjct: 1160 SPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1219

Query: 422  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 458
             +K     G L   +  KL+P F GPF +L++ GP  Y L
Sbjct: 1220 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYEL 1235

[Close]

BLAST of Cmc11g0297011 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.2e-62
Identity = 144/460 (31.30%), Postives = 237/460 (51.52%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSV 61
            R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR-- 121
                  + Q+++    + +++   +ND  L+    L    + VE +I    GLL   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQ 181
            + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGK 241
             K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 301
             + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYG-KCCR 361
            DGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1159

Query: 362  SPVCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKV 421
            SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Sbjct: 1160 SPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1219

Query: 422  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL 458
             +K     G L   +  KL+P F GPF +L++ GP  Y L
Sbjct: 1220 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYEL 1235

[Close]

BLAST of Cmc11g0297011 vs. ExPASy TrEMBL
Match: A0A5A7U7V9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00950 PE=4 SV=1)

HSP 1 Score: 915.6 bits (2365), Expect = 8.3e-263
Identity = 447/458 (97.60%), Postives = 454/458 (99.13%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
            MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS
Sbjct: 897  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 956

Query: 61   VGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
            VGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFS+SSDGGLLFERRL
Sbjct: 957  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 1016

Query: 121  CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180
            CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQV
Sbjct: 1017 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 1076

Query: 181  KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1077 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1136

Query: 241  TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
            TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 1137 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 1196

Query: 301  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSP 360
            GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYG+CCRSP
Sbjct: 1197 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSP 1256

Query: 361  VCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLK 420
            VCWGEVGEQRLMGPELVQSTN+AIQKIRSRMHTAQ RQKSYADVRRKDLEFE+GDKVFLK
Sbjct: 1257 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLK 1316

Query: 421  VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA 459
            VAPM+GVLRFERRGKLSPRFVGPFEILERIGPVAYRLA
Sbjct: 1317 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA 1354

[Close]

BLAST of Cmc11g0297011 vs. ExPASy TrEMBL
Match: A0A5A7TU00 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00280 PE=4 SV=1)

HSP 1 Score: 914.8 bits (2363), Expect = 1.4e-262
Identity = 450/458 (98.25%), Postives = 452/458 (98.69%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
           MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEI VS
Sbjct: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVS 60

Query: 61  VGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
           VGAVTIQLA LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 61  VGAVTIQLAHLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 120

Query: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180
           CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV
Sbjct: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180

Query: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240

Query: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSP 360
           GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360

Query: 361 VCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLK 420
           VCWGEVGEQRLMGPELVQS N+AIQKIRSRMHTAQ RQKSYADVRR DLEFEVGDKVFLK
Sbjct: 361 VCWGEVGEQRLMGPELVQSINEAIQKIRSRMHTAQSRQKSYADVRRIDLEFEVGDKVFLK 420

Query: 421 VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA 459
           VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA
Sbjct: 421 VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA 458

[Close]

BLAST of Cmc11g0297011 vs. ExPASy TrEMBL
Match: A0A5A7THF3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00140 PE=4 SV=1)

HSP 1 Score: 912.1 bits (2356), Expect = 9.2e-262
Identity = 447/458 (97.60%), Postives = 454/458 (99.13%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
            MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS
Sbjct: 1050 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 1109

Query: 61   VGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
            VGA+T+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 1110 VGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 1169

Query: 121  CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180
            CVP DSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR+VAEFVSRCLVCQQV
Sbjct: 1170 CVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQV 1229

Query: 181  KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQKPAGLLQPLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1230 KAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1289

Query: 241  TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
            TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG+RLDFSTAFHPQTD
Sbjct: 1290 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTD 1349

Query: 301  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSP 360
            GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 1350 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 1409

Query: 361  VCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLK 420
            VCWGEVGEQRLMGPELVQSTN+AIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLK
Sbjct: 1410 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 1469

Query: 421  VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA 459
            VAPMRGVLRFERR KLSPRFVGPFEILERIGPVAYRLA
Sbjct: 1470 VAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLA 1507

[Close]

BLAST of Cmc11g0297011 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 912.1 bits (2356), Expect = 9.2e-262
Identity = 447/458 (97.60%), Postives = 453/458 (98.91%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
            MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS
Sbjct: 950  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 1009

Query: 61   VGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
            VGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 1010 VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 1069

Query: 121  CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180
            CVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQV
Sbjct: 1070 CVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEFVSRCLVCQQV 1129

Query: 181  KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1130 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1189

Query: 241  TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
            TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTD
Sbjct: 1190 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLDFSTAFHPQTD 1249

Query: 301  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSP 360
            GQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 1250 GQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATIGMAPFEALYGKCCRSP 1309

Query: 361  VCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLK 420
            VCWGEVGEQRLMGPELVQSTN+AIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLK
Sbjct: 1310 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 1369

Query: 421  VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA 459
            VAPMRGVLRFERRGKLSPRF+GPFEILERIGPVAYRLA
Sbjct: 1370 VAPMRGVLRFERRGKLSPRFIGPFEILERIGPVAYRLA 1407

[Close]

BLAST of Cmc11g0297011 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 910.6 bits (2352), Expect = 2.7e-261
Identity = 444/458 (96.94%), Postives = 453/458 (98.91%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
           MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS
Sbjct: 468 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 527

Query: 61  VGAVTIQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
           VGAVT+QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 528 VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 587

Query: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180
           CVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQV
Sbjct: 588 CVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQV 647

Query: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 648 KAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 707

Query: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 708 TYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 767

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSP 360
           GQTERLN+VLEDMLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALY KCCRSP
Sbjct: 768 GQTERLNKVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYDKCCRSP 827

Query: 361 VCWGEVGEQRLMGPELVQSTNKAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLK 420
           +CWGEVGEQRLMGPELVQSTN+AIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLK
Sbjct: 828 ICWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 887

Query: 421 VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLA 459
           VAPMRGV+RFERRGKLSPRFVGPFEILERIGPVAYRLA
Sbjct: 888 VAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLA 925

The following BLAST results are available for this feature:

BLAST of Cmc11g0297011 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051368.1	1.7e-262	97.60	pol protein [Cucumis melo var. makuwa]	[more]
KAA0047043.1	2.9e-262	98.25	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040699.1	1.9e-261	97.60	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	1.9e-261	97.60	pol protein [Cucumis melo var. makuwa]	[more]
KAA0057672.1	5.5e-261	96.94	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0297011 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	7.2e-62	31.30	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	7.2e-62	31.30	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	7.2e-62	31.30	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	7.2e-62	31.30	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	7.2e-62	31.30	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0297011 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U7V9	8.3e-263	97.60	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7TU00	1.4e-262	98.25	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00280 PE...	[more]
A0A5A7THF3	9.2e-262	97.60	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold52...	[more]
A0A5A7U330	9.2e-262	97.60	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7UP94	2.7e-261	96.94	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]

BLAST of Cmc11g0297011 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 126..182 e-value: 1.8E-17 score: 63.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 190..398 e-value: 1.7E-46 score: 160.0
None	No IPR available	GENE3D	1.10.340.70		coord: 91..181 e-value: 2.0E-18 score: 68.4
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 118..351
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 193..356 score: 18.935028
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 194..353

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0297011.1	Cmc11g0297011.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding