Cmc11g0296811 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0296811
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr11: 15255818 .. 15258796 (-)
RNA-Seq Expression	Cmc11g0296811
Synteny	Cmc11g0296811

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACTCAAGGTTGGAACGGGAGATGTCATTTCAGCTCGTGCAGTGGGAGATGCTAAGTTGTTTTTCGAAAATAAATTCATGTTTTTGGAAAACTTGTACATAGTTCCTAAAATTAAAAGGAACTTAGTTTCCGTTTCTTGTCTTATTGAACATATGTACTCAATTAATTTTTCTATGAATGAAGCGTTCATTTATAAGAATGGTGTACATATTTGTTCAGCTAAGCTTGAAAACAACTTGTATGTATTAAGACCTAATGAAGCAAAAGCAGTTTTAAATCATGAGATGTTTAGAACTGCTAATACTCAAAATAAAAGGCAAAGAATTTCTCCAAATAACAATACCTATCTTTGGCATTTAAGATTAGGTCACATAAATCTCGATTGGATCGGGAGATTGGTAAAGAATGGACTTCTAAACAAGTTAAAAGATGTTTCATTACCTCCATGTGAATCTTGTCTTGAAGGTAAAATGACAAAGAGACCTTTTACTGGAAAAGGTTATAGAGCCAAAGAGCCTTTAGAACTTATACATTCAGACCTCTGTGGTCCGATGAATGTAAAAGCTAGAGGGGGTTTTGAATACTTCATCTCTTTTATAGATGATTATTCTAGGTATGGTTATTTATACTTAATGGAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGAGAGTACATGGATTTGAGATTTCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAGAGAGGAGAAATAGAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATAAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACAATTGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACATTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAAAAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGTCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGACGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTAGACCGCTTCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

mRNA sequence

ATGACACTCAAGGTTGGAACGGGAGATGTCATTTCAGCTCGTGCAGTGGGAGATGCTAAGTTGTTTTTCGAAAATAAATTCATGTTTTTGGAAAACTTGTACATAGTTCCTAAAATTAAAAGGAACTTAGTTTCCGTTTCTTGTCTTATTGAACATATGTACTCAATTAATTTTTCTATGAATGAAGCGTTCATTTATAAGAATGGTGTACATATTTGTTCAGCTAAGCTTGAAAACAACTTGTATGTATTAAGACCTAATGAAGCAAAAGCAGTTTTAAATCATGAGATGTTTAGAACTGCTAATACTCAAAATAAAAGGCAAAGAATTTCTCCAAATAACAATACCTATCTTTGGCATTTAAGATTAGGTCACATAAATCTCGATTGGATCGGGAGATTGGTAAAGAATGGACTTCTAAACAAGTTAAAAGATGTTTCATTACCTCCATGTGAATCTTGTCTTGAAGGTAAAATGACAAAGAGACCTTTTACTGGAAAAGGTTATAGAGCCAAAGAGCCTTTAGAACTTATACATTCAGACCTCTGTGGTCCGATGAATGTAAAAGCTAGAGGGGGTTTTGAATACTTCATCTCTTTTATAGATGATTATTCTAGGTATGGTTATTTATACTTAATGGAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGAGAGTACATGGATTTGAGATTTCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAGAGAGGAGAAATAGAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATAAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACAATTGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACATTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAAAAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGTCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGACGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTAGACCGCTTCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

Coding sequence (CDS)

ATGACACTCAAGGTTGGAACGGGAGATGTCATTTCAGCTCGTGCAGTGGGAGATGCTAAGTTGTTTTTCGAAAATAAATTCATGTTTTTGGAAAACTTGTACATAGTTCCTAAAATTAAAAGGAACTTAGTTTCCGTTTCTTGTCTTATTGAACATATGTACTCAATTAATTTTTCTATGAATGAAGCGTTCATTTATAAGAATGGTGTACATATTTGTTCAGCTAAGCTTGAAAACAACTTGTATGTATTAAGACCTAATGAAGCAAAAGCAGTTTTAAATCATGAGATGTTTAGAACTGCTAATACTCAAAATAAAAGGCAAAGAATTTCTCCAAATAACAATACCTATCTTTGGCATTTAAGATTAGGTCACATAAATCTCGATTGGATCGGGAGATTGGTAAAGAATGGACTTCTAAACAAGTTAAAAGATGTTTCATTACCTCCATGTGAATCTTGTCTTGAAGGTAAAATGACAAAGAGACCTTTTACTGGAAAAGGTTATAGAGCCAAAGAGCCTTTAGAACTTATACATTCAGACCTCTGTGGTCCGATGAATGTAAAAGCTAGAGGGGGTTTTGAATACTTCATCTCTTTTATAGATGATTATTCTAGGTATGGTTATTTATACTTAATGGAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGAGAGTACATGGATTTGAGATTTCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAGAGAGGAGAAATAGAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATAAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACAATTGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACATTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAAAAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGTCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGACGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTAGACCGCTTCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

Protein sequence

MTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDWIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDNWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKTPQEVEDMRRIPYVSAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRPLLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

Homology

[Close]

BLAST of Cmc11g0296811 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1976.4 bits (5119), Expect = 0.0e+00
Identity = 982/1003 (97.91%), Postives = 985/1003 (98.21%), Query Frame = 0


Query: 1    MTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
            MTLKVGTGDVISARAVGDAKLFF NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM
Sbjct: 233  MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 292

Query: 61   NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
            NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH
Sbjct: 293  NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 352

Query: 121  LRLGHINLDWIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
            LRLGHINLD IGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS
Sbjct: 353  LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 412

Query: 181  DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
            DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI
Sbjct: 413  DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 472

Query: 241  LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
            LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP
Sbjct: 473  LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 532

Query: 301  SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
            SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP
Sbjct: 533  SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 592

Query: 361  RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKST 420
            RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATD+ST
Sbjct: 593  RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST 652

Query: 421  RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 480
            RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED
Sbjct: 653  RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 712

Query: 481  PLSYKQAMNDVDKDNWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 540
            PLSYKQAMNDVDKD WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK
Sbjct: 713  PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 772

Query: 541  VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG 600
            VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG
Sbjct: 773  VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG 832

Query: 601  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 660
            NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP
Sbjct: 833  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 892

Query: 661  CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEAQYVLGIQIIR 720
            CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTD+KAWLAAQFQMKDLGEAQYVLGIQIIR
Sbjct: 893  CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIR 952

Query: 721  DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKTPQEVEDMRRIPY 780
            DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE+SPKTPQEVEDMRRIPY
Sbjct: 953  DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY 1012

Query: 781  VSAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRTRDYMLVYGAK 840
             SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT VKIVLKYLRRTRDYMLVYGAK
Sbjct: 1013 ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAK 1072

Query: 841  DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 900
            DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
Sbjct: 1073 DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 1132

Query: 901  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRP-----------LLIREIVQ 960
            KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPR             LIREIVQ
Sbjct: 1133 KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ 1192

Query: 961  RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 993
            RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1193 RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc11g0296811 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1949.9 bits (5050), Expect = 0.0e+00
Identity = 968/1003 (96.51%), Postives = 978/1003 (97.51%), Query Frame = 0


Query: 1    MTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
            MTLKVGTGDVISARAVGDAKLFF NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM
Sbjct: 233  MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 292

Query: 61   NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
            NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH
Sbjct: 293  NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 352

Query: 121  LRLGHINLDWIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
            LRLGHINLD IGRLVK+GLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS
Sbjct: 353  LRLGHINLDRIGRLVKDGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 412

Query: 181  DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
            DLCGPMNVKARG FEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI
Sbjct: 413  DLCGPMNVKARGSFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 472

Query: 241  LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
             RSDRGGEYMDL FQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP
Sbjct: 473  FRSDRGGEYMDLIFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 532

Query: 301  SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
            SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP
Sbjct: 533  SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 592

Query: 361  RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKST 420
            RSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATD+ST
Sbjct: 593  RSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST 652

Query: 421  RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 480
            RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED
Sbjct: 653  RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 712

Query: 481  PLSYKQAMNDVDKDNWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 540
            PLSYKQAMNDVDKD WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK
Sbjct: 713  PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 772

Query: 541  VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG 600
            VQTFKARLVAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEIWQMDVKTAFLNG
Sbjct: 773  VQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEIWQMDVKTAFLNG 832

Query: 601  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 660
            NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP
Sbjct: 833  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 892

Query: 661  CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEAQYVLGIQIIR 720
            CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTD+KAWLAAQFQMKDLGE QYVLGIQIIR
Sbjct: 893  CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIR 952

Query: 721  DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKTPQEVEDMRRIPY 780
            DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE+SPKTPQEVEDMRRIPY
Sbjct: 953  DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY 1012

Query: 781  VSAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRTRDYMLVYGAK 840
             SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT VKI+LKYLRRTRDYMLVYGAK
Sbjct: 1013 ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAK 1072

Query: 841  DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 900
            DLILTGYT+SDFQTDKDSRKSTS SVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
Sbjct: 1073 DLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 1132

Query: 901  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRP-----------LLIREIVQ 960
            KEAVWL+KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPR             LIREIVQ
Sbjct: 1133 KEAVWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ 1192

Query: 961  RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 993
            RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1193 RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc11g0296811 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1738.0 bits (4500), Expect = 0.0e+00
Identity = 861/882 (97.62%), Postives = 865/882 (98.07%), Query Frame = 0


Query: 122  RLGHINLDWIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 181
            +LGHINLD IGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD
Sbjct: 228  KLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 287

Query: 182  LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL 241
            LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL
Sbjct: 288  LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL 347

Query: 242  RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 301
            RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS
Sbjct: 348  RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 407

Query: 302  SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 361
            SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR
Sbjct: 408  SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 467

Query: 362  SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKSTR 421
            SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATD+STR
Sbjct: 468  SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 527

Query: 422  VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 481
            VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP
Sbjct: 528  VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 587

Query: 482  LSYKQAMNDVDKDNWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV 541
            LSYKQAMNDVDKD WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV
Sbjct: 588  LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV 647

Query: 542  QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 601
            QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN
Sbjct: 648  QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 707

Query: 602  LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC 661
            LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC
Sbjct: 708  LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC 767

Query: 662  VYKKINKGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEAQYVLGIQIIRD 721
            VYKKINKGKVAFLVLYVDDILLIGNDVGYLTD+KAWLAAQFQMKDLGEAQYVLGIQIIRD
Sbjct: 768  VYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRD 827

Query: 722  RKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKTPQEVEDMRRIPYV 781
            RKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE+SPKTPQEVEDMRRIPY 
Sbjct: 828  RKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYA 887

Query: 782  SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRTRDYMLVYGAKD 841
            SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT VKIVLKYLRRTRDYMLVYGAKD
Sbjct: 888  SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKD 947

Query: 842  LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAK 901
            LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAK
Sbjct: 948  LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAK 1007

Query: 902  EAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRP-----------LLIREIVQR 961
            EAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPR             LIREIVQR
Sbjct: 1008 EAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQR 1067

Query: 962  GDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 993
            GDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1068 GDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1109

[Close]

BLAST of Cmc11g0296811 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1613.2 bits (4176), Expect = 0.0e+00
Identity = 794/1004 (79.08%), Postives = 881/1004 (87.75%), Query Frame = 0


Query: 1    MTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
            MT++VGTG V+SA AVG  +L  +  F+ LEN+Y+VP +KRNL+SV CL+E  YS+ F++
Sbjct: 335  MTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNV 394

Query: 61   NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
            N+ FIYKNGV ICSAKLENNLYVLR   +KA+LN EMF+TA TQNKR +ISP  N +LWH
Sbjct: 395  NKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWH 454

Query: 121  LRLGHINLDWIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
            LRLGHINL+ I RLVKNGLL++L++ SLP CESCLEGKMTKRPFTGKG+RAKEPLEL+HS
Sbjct: 455  LRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHS 514

Query: 181  DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
            DLCGPMNVKARGGFEYFI+F DDYSRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK 
Sbjct: 515  DLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKT 574

Query: 241  LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
             RSDRGGEYMDL+FQ+Y++E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP
Sbjct: 575  FRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLP 634

Query: 301  SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
            +SFWGYAV+TAV+ILN VPSKSVSETP +LW GRK SL HFRIWGCPAHVL  NPKKLEP
Sbjct: 635  NSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEP 694

Query: 361  RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLS----EAT 420
            RS+LC FVGYPK TRGG F+DP++N+VFVSTNATFLEEDH+R HKPRSK+VL+    E T
Sbjct: 695  RSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETT 754

Query: 421  DKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDD 480
            + STRVV+E    +RV    +S ++H  QSLR PRRSGRV + P RY+ LTET  VI D 
Sbjct: 755  EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDG 814

Query: 481  GVEDPLSYKQAMNDVDKDNWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRD 540
             +EDPL++K+AM DVDKD W+KAM+LE+ESMYFNSVW+LVD P+GVKPIGCKWIYKRKR 
Sbjct: 815  DIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRG 874

Query: 541  SAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTA 600
            + GKVQTFKARLVAKGYTQ EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTA
Sbjct: 875  ADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTA 934

Query: 601  FLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQN 660
            FLNGNLEE+I+M QPEGFI  GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ 
Sbjct: 935  FLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQI 994

Query: 661  VDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEAQYVLGI 720
            VDEPCVYK+I    VAFLVLYVDDILLIGND+G LTDIK WLA QFQMKDLGEAQ+VLGI
Sbjct: 995  VDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGI 1054

Query: 721  QIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKTPQEVEDMR 780
            QI RDRKNK LALSQA+YIDK++V+YSMQNSK+GLLPFRHGV LSKE+ PKTPQ+VE+MR
Sbjct: 1055 QIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMR 1114

Query: 781  RIPYVSAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRTRDYMLV 840
             IPY SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL HWT VK +LKYLRRTRDY LV
Sbjct: 1115 HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLV 1174

Query: 841  YGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 900
            YG+KDLILTGYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA
Sbjct: 1175 YGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 1234

Query: 901  CEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRP-----------LLIR 960
            CEAAKEAVWLR FL DLEVVPNM+ PITLYCDNSGAVANS+EPR             LIR
Sbjct: 1235 CEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIR 1294

Query: 961  EIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM 990
            EIV RGDVIVT+IAS HN+ADPFTK LTAKVFEGHLESLGLRDM
Sbjct: 1295 EIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDM 1338

[Close]

BLAST of Cmc11g0296811 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1613.2 bits (4176), Expect = 0.0e+00
Identity = 794/1004 (79.08%), Postives = 881/1004 (87.75%), Query Frame = 0


Query: 1    MTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
            MT++VGTG V+SA AVG  +L  +  F+ LEN+Y+VP +KRNL+SV CL+E  YS+ F++
Sbjct: 336  MTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNV 395

Query: 61   NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
            N+ FIYKNGV ICSAKLENNLYVLR   +KA+LN EMF+TA TQNKR +ISP  N +LWH
Sbjct: 396  NKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWH 455

Query: 121  LRLGHINLDWIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
            LRLGHINL+ I RLVKNGLL++L++ SLP CESCLEGKMTKRPFTGKG+RAKEPLEL+HS
Sbjct: 456  LRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHS 515

Query: 181  DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
            DLCGPMNVKARGGFEYFI+F DDYSRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK 
Sbjct: 516  DLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKT 575

Query: 241  LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
             RSDRGGEYMDL+FQ+Y++E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP
Sbjct: 576  FRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLP 635

Query: 301  SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
            +SFWGYAV+TAV+ILN VPSKSVSETP +LW GRK SL HFRIWGCPAHVL  NPKKLEP
Sbjct: 636  NSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEP 695

Query: 361  RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLS----EAT 420
            RS+LC FVGYPK TRGG F+DP++N+VFVSTNATFLEEDH+R HKPRSK+VL+    E T
Sbjct: 696  RSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETT 755

Query: 421  DKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDD 480
            + STRVV+E    +RV    +S ++H  QSLR PRRSGRV + P RY+ LTET  VI D 
Sbjct: 756  EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDG 815

Query: 481  GVEDPLSYKQAMNDVDKDNWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRD 540
             +EDPL++K+AM DVDKD W+KAM+LE+ESMYFNSVW+LVD P+GVKPIGCKWIYKRKR 
Sbjct: 816  DIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRG 875

Query: 541  SAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTA 600
            + GKVQTFKARLVAKGYTQ EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTA
Sbjct: 876  ADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTA 935

Query: 601  FLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQN 660
            FLNGNLEE+I+M QPEGFI  GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ 
Sbjct: 936  FLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQI 995

Query: 661  VDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEAQYVLGI 720
            VDEPCVYK+I    VAFLVLYVDDILLIGND+G LTDIK WLA QFQMKDLGEAQ+VLGI
Sbjct: 996  VDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGI 1055

Query: 721  QIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKTPQEVEDMR 780
            QI RDRKNK LALSQA+YIDK++V+YSMQNSK+GLLPFRHGV LSKE+ PKTPQ+VE+MR
Sbjct: 1056 QIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMR 1115

Query: 781  RIPYVSAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRTRDYMLV 840
             IPY SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL HWT VK +LKYLRRTRDY LV
Sbjct: 1116 HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLV 1175

Query: 841  YGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 900
            YG+KDLILTGYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA
Sbjct: 1176 YGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 1235

Query: 901  CEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRP-----------LLIR 960
            CEAAKEAVWLR FL DLEVVPNM+ PITLYCDNSGAVANS+EPR             LIR
Sbjct: 1236 CEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIR 1295

Query: 961  EIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM 990
            EIV RGDVIVT+IAS HN+ADPFTK LTAKVFEGHLESLGLRDM
Sbjct: 1296 EIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDM 1339

[Close]

BLAST of Cmc11g0296811 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 3.9e-198
Identity = 392/1027 (38.17%), Postives = 594/1027 (57.84%), Query Frame = 0


Query: 2    TLKVGTGDVISARAVGDAKLFFE-NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 61
            T+K+G         +GD  +       + L+++  VP ++ NL+S   L    Y   F+ 
Sbjct: 321  TVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFAN 380

Query: 62   NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 121
             +  + K  + I        LY       +  LN            +  IS +    LWH
Sbjct: 381  QKWRLTKGSLVIAKGVARGTLYRTNAEICQGELN----------AAQDEISVD----LWH 440

Query: 122  LRLGHINLDWIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 181
             R+GH++   +  L K  L++  K  ++ PC+ CL GK  +  F     R    L+L++S
Sbjct: 441  KRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYS 500

Query: 182  DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 241
            D+CGPM +++ GG +YF++FIDD SR  ++Y+++ K +  + F+++   VE    +K+K 
Sbjct: 501  DVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKR 560

Query: 242  LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 301
            LRSD GGEY    F++Y   HGI+ + + PGTPQ NGV+ER NRT+++ VRSM+  A+LP
Sbjct: 561  LRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLP 620

Query: 302  SSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCP--AHVLVTNPKK 361
             SFWG AV+TA +++N  PS  ++ E P  +W  ++ S SH +++GC   AHV      K
Sbjct: 621  KSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTK 680

Query: 362  LEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHM----RNHKPRSKLVLS 421
            L+ +S  C F+GY  E  G   +DP + +V  S +  F E +       + K ++ ++ +
Sbjct: 681  LDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPN 740

Query: 422  EATDKSTRVVDEVGPSSRVDETTTSGQ-------------------SHPSQSLRMP---R 481
              T  ST   +     S  DE +  G+                    HP+Q        R
Sbjct: 741  FVTIPSTS-NNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLR 800

Query: 482  RSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDNWVKAMDLEMESMYFNS 541
            RS R   +  RY   +   V+I DD   +P S K+ ++  +K+  +KAM  EMES+  N 
Sbjct: 801  RSERPRVESRRY--PSTEYVLISDD--REPESLKEVLSHPEKNQLMKAMQEEMESLQKNG 860

Query: 542  VWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAML 601
             ++LV+LP+G +P+ CKW++K K+D   K+  +KARLV KG+ Q++G+D++E FSPV  +
Sbjct: 861  TYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKM 920

Query: 602  KSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIY 661
             SIR +LS+A   D E+ Q+DVKTAFL+G+LEE I+M QPEGF   G++  VCKLN+S+Y
Sbjct: 921  TSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLY 980

Query: 662  GLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KKINKGKVAFLVLYVDDILLIGNDVGY 721
            GLKQA R W ++FD+ +KS  + +   +PCVY K+ ++     L+LYVDD+L++G D G 
Sbjct: 981  GLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGL 1040

Query: 722  LTDIKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKG 781
            +  +K  L+  F MKDLG AQ +LG++I+R+R ++ L LSQ  YI+++L R++M+N+K  
Sbjct: 1041 IAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPV 1100

Query: 782  LLPFRHGVHLSKEKSPKTPQEVEDMRRIPYVSAVGSLMYAMLCTRPDICYAVGIVSRYQS 841
              P    + LSK+  P T +E  +M ++PY SAVGSLMYAM+CTRPDI +AVG+VSR+  
Sbjct: 1101 STPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLE 1160

Query: 842  NPGLDHWTTVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLN 901
            NPG +HW  VK +L+YLR T    L +G  D IL GYTD+D   D D+RKS++G +FT +
Sbjct: 1161 NPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFS 1220

Query: 902  GGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNS 961
            GGA+ W+S  Q C+A ST EAEY+AA E  KE +WL++FL +L +         +YCD+ 
Sbjct: 1221 GGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL---HQKEYVVYCDSQ 1280

Query: 962  GAVANSK-----------EPRPLLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEG 987
             A+  SK           + R   IRE+V    + V KI++  N AD  TK +    FE 
Sbjct: 1281 SAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFEL 1325

[Close]

BLAST of Cmc11g0296811 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 478.0 bits (1229), Expect = 2.6e-133
Identity = 334/1114 (29.98%), Postives = 548/1114 (49.19%), Query Frame = 0


Query: 8    GDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYK 67
            G+ I A   G  +L  +++ + LE++    +   NL+SV  L E   SI F  +   I K
Sbjct: 324  GEFIYATKRGIVRLRNDHE-ITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISK 383

Query: 68   NGVHIC-SAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHI 127
            NG+ +  ++ + NN+          V+N + + + N ++K       NN  LWH R GHI
Sbjct: 384  NGLMVVKNSGMLNNV---------PVINFQAY-SINAKHK-------NNFRLWHERFGHI 443

Query: 128  NLDWIGRLVK---------NGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRA--KEPL 187
            +    G+L++           LLN L ++S   CE CL GK  + PF     +   K PL
Sbjct: 444  S---DGKLLEIKRKNMFSDQSLLNNL-ELSCEICEPCLNGKQARLPFKQLKDKTHIKRPL 503

Query: 188  ELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLS 247
             ++HSD+CGP+         YF+ F+D ++ Y   YL+++KS+    F+++  + E   +
Sbjct: 504  FVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFN 563

Query: 248  KKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMS 307
             K+  L  D G EY+    + + ++ GI   L+ P TPQ NGVSER  RT+ +  R+M+S
Sbjct: 564  LKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVS 623

Query: 308  YAQLPSSFWGYAVETAVHILNNVPSKSV---SETPFELWRGRKPSLSHFRIWGCPAHVLV 367
             A+L  SFWG AV TA +++N +PS+++   S+TP+E+W  +KP L H R++G   +V +
Sbjct: 624  GAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHI 683

Query: 368  TNPK-KLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLV 427
             N + K + +S    FVGY  E  G   +D    +  V+ +    E + + +   + + V
Sbjct: 684  KNKQGKFDDKSFKSIFVGY--EPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETV 743

Query: 428  L----SEATDK-----STRVVDEVGP--SSRVDETTTSGQSHPSQSLRMPRRSGRVV--- 487
                  E+ +K     S +++    P  S   D       S  S++   P  S +++   
Sbjct: 744  FLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTE 803

Query: 488  -----------------SQPNRYL-------------------------GLTETQVVIPD 547
                              + N+Y                            +ET   + +
Sbjct: 804  FPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKE 863

Query: 548  DGVEDP---------------------LSYKQ--------------AMNDV--------- 607
             G+++P                     +SY +                NDV         
Sbjct: 864  IGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQY 923

Query: 608  --DKDNWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 667
              DK +W +A++ E+ +   N+ W +   PE    +  +W++  K +  G    +KARLV
Sbjct: 924  RDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLV 983

Query: 668  AKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMS 727
            A+G+TQ+  +DYEETF+PVA + S R +LS+   Y+ ++ QMDVKTAFLNG L+E I+M 
Sbjct: 984  ARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMR 1043

Query: 728  QPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY--KKIN 787
             P+G         VCKLN++IYGLKQA+R W   F+ A+K   F  +  + C+Y   K N
Sbjct: 1044 LPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGN 1103

Query: 788  KGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTL 847
              +  +++LYVDD+++   D+  + + K +L  +F+M DL E ++ +GI+I  + +   +
Sbjct: 1104 INENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKI 1163

Query: 848  ALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKTPQEVEDMRRIPYVSAVGSL 907
             LSQ+ Y+ K+L +++M+N      P    ++     S       ++    P  S +G L
Sbjct: 1164 YLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNS-------DEDCNTPCRSLIGCL 1223

Query: 908  MYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRTRDYMLVYG---AKDLIL 967
            MY MLCTRPD+  AV I+SRY S    + W  +K VL+YL+ T D  L++    A +  +
Sbjct: 1224 MYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKI 1283

Query: 968  TGYTDSDFQTDKDSRKSTSGSVFTL-NGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA 987
             GY DSD+   +  RKST+G +F + +   + W + +Q  +A S+ EAEY+A  EA +EA
Sbjct: 1284 IGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREA 1343

[Close]

BLAST of Cmc11g0296811 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.5e-120
Identity = 328/1130 (29.03%), Postives = 518/1130 (45.84%), Query Frame = 0


Query: 5    VGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIE-HMYSINFSMNEA 64
            +  G  I     G A L   ++ + L  +  VP I +NL+SV  L   +  S+ F    +
Sbjct: 341  IADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEF-FPAS 400

Query: 65   FIYKN---GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 124
            F  K+   GV +   K ++ LY      ++AV    MF  A+  +K    S       WH
Sbjct: 401  FQVKDLNTGVPLLQGKTKDELYEWPIASSQAV---SMF--ASPCSKATHSS-------WH 460

Query: 125  LRLGHINLDWIGRLVKNGLLNKLK-DVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIH 184
             RLGH +L  +  ++ N  L  L     L  C  C   K  K PF+     + +PLE I+
Sbjct: 461  SRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIY 520

Query: 185  SDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIK 244
            SD+     + +   + Y++ F+D ++RY +LY ++ KS+  + F  +K+ VEN    +I 
Sbjct: 521  SDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIG 580

Query: 245  ILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQL 304
             L SD GGE++ LR  DY+ +HGI    S P TP+ NG+SER++R +++M  +++S+A +
Sbjct: 581  TLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 640

Query: 305  PSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVT--NPK 364
            P ++W YA   AV+++N +P+  +  ++PF+   G+ P+    +++GC  +  +   N  
Sbjct: 641  PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 700

Query: 365  KLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE------------------ 424
            KLE +S+ C F+GY       L       R++ S +  F E                   
Sbjct: 701  KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQR 760

Query: 425  ----DHMRNHK--PRSKLVL------------------SEATDKSTRVVDEVGPSSRVDE 484
                 +  +H   P + LVL                  S +   +T+V     PSS +  
Sbjct: 761  SDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISS 820

Query: 485  TTTSGQSHPSQS--------------------LRMPRRSGRVVSQPNRYLGLTETQVVIP 544
             ++S  + PS +                    L  P  +    + PN+   L ++ +  P
Sbjct: 821  PSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSP 880

Query: 545  ----------------------------------------------------DDGVEDP- 604
                                                                 DG+  P 
Sbjct: 881  HIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPN 940

Query: 605  --LSY----------KQAMNDVDKDNWVKAMDLEMESMYFNSVWELV-DLPEGVKPIGCK 664
               SY          + A+  +  D W +AM  E+ +   N  W+LV   P  V  +GC+
Sbjct: 941  QKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCR 1000

Query: 665  WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 724
            WI+ +K +S G +  +KARLVAKGY QR G+DY ETFSPV    SIRI+L +A    + I
Sbjct: 1001 WIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPI 1060

Query: 725  WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 784
             Q+DV  AFL G L + ++MSQP GF+ + +   VC+L ++IYGLKQA R+W +   T +
Sbjct: 1061 RQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYL 1120

Query: 785  KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLG 844
             + GF  ++ +  ++       + ++++YVDDIL+ GND   L      L+ +F +K+  
Sbjct: 1121 LTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHE 1180

Query: 845  EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKT 904
            +  Y LGI+    R  + L LSQ  Y   LL R +M  +K    P      L+     K 
Sbjct: 1181 DLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKL 1240

Query: 905  PQEVEDMRRIPYVSAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLR 964
            P   E      Y   VGSL Y +  TRPD+ YAV  +S+Y   P  DHW  +K VL+YL 
Sbjct: 1241 PDPTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLA 1300

Query: 965  RTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADS 987
             T D+ + +     L L  Y+D+D+  D D   ST+G +  L    + W S KQ  +  S
Sbjct: 1301 GTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRS 1360

[Close]

BLAST of Cmc11g0296811 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 5.2e-118
Identity = 318/1128 (28.19%), Postives = 493/1128 (43.71%), Query Frame = 0


Query: 5    VGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIE------HMYSINF 64
            V  G  I     G   L  +++ + L N+  VP I +NL+SV  L          +  +F
Sbjct: 362  VADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASF 421

Query: 65   SMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYL 124
             + +      GV +   K ++ LY     E     +  +   A+  +K    S       
Sbjct: 422  QVKD---LNTGVPLLQGKTKDELY-----EWPIASSQPVSLFASPSSKATHSS------- 481

Query: 125  WHLRLGHINLDWIGRLVKNGLLNKLK-DVSLPPCESCLEGKMTKRPFTGKGYRAKEPLEL 184
            WH RLGH     +  ++ N  L+ L        C  CL  K  K PF+     +  PLE 
Sbjct: 482  WHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEY 541

Query: 185  IHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKK 244
            I+SD+     + +   + Y++ F+D ++RY +LY ++ KS+  E F  +K  +EN    +
Sbjct: 542  IYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTR 601

Query: 245  IKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA 304
            I    SD GGE++ L   +Y  +HGI    S P TP+ NG+SER++R +++   +++S+A
Sbjct: 602  IGTFYSDNGGEFVAL--WEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHA 661

Query: 305  QLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVT--N 364
             +P ++W YA   AV+++N +P+  +  E+PF+   G  P+    R++GC  +  +   N
Sbjct: 662  SIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYN 721

Query: 365  PKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE-----------DHMRN 424
              KL+ +SR C F+GY       L    Q +R+++S +  F E              ++ 
Sbjct: 722  QHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQE 781

Query: 425  HKPRSKLVLSEATDKSTR------------------------------------------ 484
             +  S  V S  T   TR                                          
Sbjct: 782  QRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSS 841

Query: 485  ---------VVDEVGPSSRVDETTTSGQSHPS-----------------QSLRMPRRSGR 544
                        + GP      T T  Q+H S                 QSL  P +S  
Sbjct: 842  SFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSS 901

Query: 545  VVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMND------------------------- 604
                P      + T    P   +  P    Q +N+                         
Sbjct: 902  SSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPK 961

Query: 605  -------------------VDKDNWVKAMDLEMESMYFNSVWELVDLPEG-VKPIGCKWI 664
                               +  + W  AM  E+ +   N  W+LV  P   V  +GC+WI
Sbjct: 962  YSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWI 1021

Query: 665  YKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQ 724
            + +K +S G +  +KARLVAKGY QR G+DY ETFSPV    SIRI+L +A    + I Q
Sbjct: 1022 FTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQ 1081

Query: 725  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 784
            +DV  AFL G L + ++MSQP GFI + +   VCKL +++YGLKQA R+W +     + +
Sbjct: 1082 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLT 1141

Query: 785  YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEA 844
             GF  +V +  ++       + ++++YVDDIL+ GND   L +    L+ +F +KD  E 
Sbjct: 1142 IGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1201

Query: 845  QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKTPQ 904
             Y LGI+    R    L LSQ  YI  LL R +M  +K    P      LS     K   
Sbjct: 1202 HYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTD 1261

Query: 905  EVEDMRRIPYVSAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRT 964
              E      Y   VGSL Y +  TRPDI YAV  +S++   P  +H   +K +L+YL  T
Sbjct: 1262 PTE------YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGT 1321

Query: 965  RDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTM 987
             ++ + +     L L  Y+D+D+  DKD   ST+G +  L    + W S KQ  +  S+ 
Sbjct: 1322 PNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSST 1381

[Close]

BLAST of Cmc11g0296811 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 3.8e-36
Identity = 105/314 (33.44%), Postives = 147/314 (46.82%), Query Frame = 0


Query: 591 MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 650
           MDV TAFLN  ++E I++ QP GF+ +     V +L   +YGLKQA   WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 651 YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEA 710
            GF ++  E  +Y +       ++ +YVDD+L+          +K  L   + MKDLG+ 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 711 QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKTPQ 770
              LG+  I    N  + LS   YI K      +   K    P  +   L +  SP    
Sbjct: 121 DKFLGLN-IHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSP---- 180

Query: 771 EVEDMRRIPYVSAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRT 830
            ++D+   PY S VG L++     RPDI Y V ++SR+   P   H  + + VL+YL  T
Sbjct: 181 HLKDI--TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 831 RDYMLVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIK-QGCIADST 890
           R   L Y     L LT Y D+      D   ST G V  L G  V W S K +G I   +
Sbjct: 241 RSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPS 300

Query: 891 MEAEYVAACEAAKE 903
            EAEY+ A E   E
Sbjct: 301 TEAEYITASETVME 307

[Close]

BLAST of Cmc11g0296811 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 1976.4 bits (5119), Expect = 0.0e+00
Identity = 982/1003 (97.91%), Postives = 985/1003 (98.21%), Query Frame = 0


Query: 1    MTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
            MTLKVGTGDVISARAVGDAKLFF NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM
Sbjct: 233  MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 292

Query: 61   NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
            NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH
Sbjct: 293  NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 352

Query: 121  LRLGHINLDWIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
            LRLGHINLD IGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS
Sbjct: 353  LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 412

Query: 181  DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
            DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI
Sbjct: 413  DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 472

Query: 241  LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
            LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP
Sbjct: 473  LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 532

Query: 301  SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
            SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP
Sbjct: 533  SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 592

Query: 361  RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKST 420
            RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATD+ST
Sbjct: 593  RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST 652

Query: 421  RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 480
            RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED
Sbjct: 653  RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 712

Query: 481  PLSYKQAMNDVDKDNWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 540
            PLSYKQAMNDVDKD WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK
Sbjct: 713  PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 772

Query: 541  VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG 600
            VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG
Sbjct: 773  VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG 832

Query: 601  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 660
            NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP
Sbjct: 833  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 892

Query: 661  CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEAQYVLGIQIIR 720
            CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTD+KAWLAAQFQMKDLGEAQYVLGIQIIR
Sbjct: 893  CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIR 952

Query: 721  DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKTPQEVEDMRRIPY 780
            DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE+SPKTPQEVEDMRRIPY
Sbjct: 953  DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY 1012

Query: 781  VSAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRTRDYMLVYGAK 840
             SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT VKIVLKYLRRTRDYMLVYGAK
Sbjct: 1013 ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAK 1072

Query: 841  DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 900
            DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
Sbjct: 1073 DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 1132

Query: 901  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRP-----------LLIREIVQ 960
            KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPR             LIREIVQ
Sbjct: 1133 KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ 1192

Query: 961  RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 993
            RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1193 RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc11g0296811 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 1949.9 bits (5050), Expect = 0.0e+00
Identity = 968/1003 (96.51%), Postives = 978/1003 (97.51%), Query Frame = 0


Query: 1    MTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
            MTLKVGTGDVISARAVGDAKLFF NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM
Sbjct: 233  MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 292

Query: 61   NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
            NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH
Sbjct: 293  NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 352

Query: 121  LRLGHINLDWIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
            LRLGHINLD IGRLVK+GLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS
Sbjct: 353  LRLGHINLDRIGRLVKDGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 412

Query: 181  DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
            DLCGPMNVKARG FEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI
Sbjct: 413  DLCGPMNVKARGSFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 472

Query: 241  LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
             RSDRGGEYMDL FQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP
Sbjct: 473  FRSDRGGEYMDLIFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 532

Query: 301  SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
            SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP
Sbjct: 533  SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 592

Query: 361  RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKST 420
            RSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATD+ST
Sbjct: 593  RSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST 652

Query: 421  RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 480
            RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED
Sbjct: 653  RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 712

Query: 481  PLSYKQAMNDVDKDNWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 540
            PLSYKQAMNDVDKD WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK
Sbjct: 713  PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 772

Query: 541  VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG 600
            VQTFKARLVAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEIWQMDVKTAFLNG
Sbjct: 773  VQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEIWQMDVKTAFLNG 832

Query: 601  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 660
            NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP
Sbjct: 833  NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 892

Query: 661  CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEAQYVLGIQIIR 720
            CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTD+KAWLAAQFQMKDLGE QYVLGIQIIR
Sbjct: 893  CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIR 952

Query: 721  DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKTPQEVEDMRRIPY 780
            DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE+SPKTPQEVEDMRRIPY
Sbjct: 953  DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY 1012

Query: 781  VSAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRTRDYMLVYGAK 840
             SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT VKI+LKYLRRTRDYMLVYGAK
Sbjct: 1013 ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAK 1072

Query: 841  DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 900
            DLILTGYT+SDFQTDKDSRKSTS SVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
Sbjct: 1073 DLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 1132

Query: 901  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRP-----------LLIREIVQ 960
            KEAVWL+KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPR             LIREIVQ
Sbjct: 1133 KEAVWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ 1192

Query: 961  RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 993
            RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1193 RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc11g0296811 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 1738.0 bits (4500), Expect = 0.0e+00
Identity = 861/882 (97.62%), Postives = 865/882 (98.07%), Query Frame = 0


Query: 122  RLGHINLDWIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 181
            +LGHINLD IGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD
Sbjct: 228  KLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 287

Query: 182  LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL 241
            LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL
Sbjct: 288  LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL 347

Query: 242  RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 301
            RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS
Sbjct: 348  RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 407

Query: 302  SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 361
            SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR
Sbjct: 408  SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 467

Query: 362  SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKSTR 421
            SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATD+STR
Sbjct: 468  SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 527

Query: 422  VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 481
            VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP
Sbjct: 528  VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 587

Query: 482  LSYKQAMNDVDKDNWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV 541
            LSYKQAMNDVDKD WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV
Sbjct: 588  LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV 647

Query: 542  QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 601
            QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN
Sbjct: 648  QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 707

Query: 602  LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC 661
            LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC
Sbjct: 708  LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC 767

Query: 662  VYKKINKGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEAQYVLGIQIIRD 721
            VYKKINKGKVAFLVLYVDDILLIGNDVGYLTD+KAWLAAQFQMKDLGEAQYVLGIQIIRD
Sbjct: 768  VYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRD 827

Query: 722  RKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKTPQEVEDMRRIPYV 781
            RKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE+SPKTPQEVEDMRRIPY 
Sbjct: 828  RKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYA 887

Query: 782  SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRTRDYMLVYGAKD 841
            SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT VKIVLKYLRRTRDYMLVYGAKD
Sbjct: 888  SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKD 947

Query: 842  LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAK 901
            LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAK
Sbjct: 948  LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAK 1007

Query: 902  EAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRP-----------LLIREIVQR 961
            EAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPR             LIREIVQR
Sbjct: 1008 EAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQR 1067

Query: 962  GDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 993
            GDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1068 GDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1109

[Close]

BLAST of Cmc11g0296811 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 1613.2 bits (4176), Expect = 0.0e+00
Identity = 794/1004 (79.08%), Postives = 881/1004 (87.75%), Query Frame = 0


Query: 1    MTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
            MT++VGTG V+SA AVG  +L  +  F+ LEN+Y+VP +KRNL+SV CL+E  YS+ F++
Sbjct: 336  MTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNV 395

Query: 61   NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
            N+ FIYKNGV ICSAKLENNLYVLR   +KA+LN EMF+TA TQNKR +ISP  N +LWH
Sbjct: 396  NKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWH 455

Query: 121  LRLGHINLDWIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
            LRLGHINL+ I RLVKNGLL++L++ SLP CESCLEGKMTKRPFTGKG+RAKEPLEL+HS
Sbjct: 456  LRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHS 515

Query: 181  DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
            DLCGPMNVKARGGFEYFI+F DDYSRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK 
Sbjct: 516  DLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKT 575

Query: 241  LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
             RSDRGGEYMDL+FQ+Y++E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP
Sbjct: 576  FRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLP 635

Query: 301  SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
            +SFWGYAV+TAV+ILN VPSKSVSETP +LW GRK SL HFRIWGCPAHVL  NPKKLEP
Sbjct: 636  NSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEP 695

Query: 361  RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLS----EAT 420
            RS+LC FVGYPK TRGG F+DP++N+VFVSTNATFLEEDH+R HKPRSK+VL+    E T
Sbjct: 696  RSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETT 755

Query: 421  DKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDD 480
            + STRVV+E    +RV    +S ++H  QSLR PRRSGRV + P RY+ LTET  VI D 
Sbjct: 756  EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDG 815

Query: 481  GVEDPLSYKQAMNDVDKDNWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRD 540
             +EDPL++K+AM DVDKD W+KAM+LE+ESMYFNSVW+LVD P+GVKPIGCKWIYKRKR 
Sbjct: 816  DIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRG 875

Query: 541  SAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTA 600
            + GKVQTFKARLVAKGYTQ EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTA
Sbjct: 876  ADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTA 935

Query: 601  FLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQN 660
            FLNGNLEE+I+M QPEGFI  GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ 
Sbjct: 936  FLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQI 995

Query: 661  VDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEAQYVLGI 720
            VDEPCVYK+I    VAFLVLYVDDILLIGND+G LTDIK WLA QFQMKDLGEAQ+VLGI
Sbjct: 996  VDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGI 1055

Query: 721  QIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKTPQEVEDMR 780
            QI RDRKNK LALSQA+YIDK++V+YSMQNSK+GLLPFRHGV LSKE+ PKTPQ+VE+MR
Sbjct: 1056 QIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMR 1115

Query: 781  RIPYVSAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRTRDYMLV 840
             IPY SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL HWT VK +LKYLRRTRDY LV
Sbjct: 1116 HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLV 1175

Query: 841  YGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 900
            YG+KDLILTGYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA
Sbjct: 1176 YGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 1235

Query: 901  CEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRP-----------LLIR 960
            CEAAKEAVWLR FL DLEVVPNM+ PITLYCDNSGAVANS+EPR             LIR
Sbjct: 1236 CEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIR 1295

Query: 961  EIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM 990
            EIV RGDVIVT+IAS HN+ADPFTK LTAKVFEGHLESLGLRDM
Sbjct: 1296 EIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDM 1339

[Close]

BLAST of Cmc11g0296811 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 1613.2 bits (4176), Expect = 0.0e+00
Identity = 794/1004 (79.08%), Postives = 881/1004 (87.75%), Query Frame = 0


Query: 1    MTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
            MT++VGTG V+SA AVG  +L  +  F+ LEN+Y+VP +KRNL+SV CL+E  YS+ F++
Sbjct: 336  MTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNV 395

Query: 61   NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
            N+ FIYKNGV ICSAKLENNLYVLR   +KA+LN EMF+TA TQNKR +ISP  N +LWH
Sbjct: 396  NKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWH 455

Query: 121  LRLGHINLDWIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
            LRLGHINL+ I RLVKNGLL++L++ SLP CESCLEGKMTKRPFTGKG+RAKEPLEL+HS
Sbjct: 456  LRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHS 515

Query: 181  DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
            DLCGPMNVKARGGFEYFI+F DDYSRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK 
Sbjct: 516  DLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKT 575

Query: 241  LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
             RSDRGGEYMDL+FQ+Y++E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP
Sbjct: 576  FRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLP 635

Query: 301  SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
            +SFWGYAV+TAV+ILN VPSKSVSETP +LW GRK SL HFRIWGCPAHVL  NPKKLEP
Sbjct: 636  NSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEP 695

Query: 361  RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLS----EAT 420
            RS+LC FVGYPK TRGG F+DP++N+VFVSTNATFLEEDH+R HKPRSK+VL+    E T
Sbjct: 696  RSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETT 755

Query: 421  DKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDD 480
            + STRVV+E    +RV    +S ++H  QSLR PRRSGRV + P RY+ LTET  VI D 
Sbjct: 756  EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDG 815

Query: 481  GVEDPLSYKQAMNDVDKDNWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRD 540
             +EDPL++K+AM DVDKD W+KAM+LE+ESMYFNSVW+LVD P+GVKPIGCKWIYKRKR 
Sbjct: 816  DIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRG 875

Query: 541  SAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTA 600
            + GKVQTFKARLVAKGYTQ EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTA
Sbjct: 876  ADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTA 935

Query: 601  FLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQN 660
            FLNGNLEE+I+M QPEGFI  GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ 
Sbjct: 936  FLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQI 995

Query: 661  VDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEAQYVLGI 720
            VDEPCVYK+I    VAFLVLYVDDILLIGND+G LTDIK WLA QFQMKDLGEAQ+VLGI
Sbjct: 996  VDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGI 1055

Query: 721  QIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKTPQEVEDMR 780
            QI RDRKNK LALSQA+YIDK++V+YSMQNSK+GLLPFRHGV LSKE+ PKTPQ+VE+MR
Sbjct: 1056 QIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMR 1115

Query: 781  RIPYVSAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRTRDYMLV 840
             IPY SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL HWT VK +LKYLRRTRDY LV
Sbjct: 1116 HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLV 1175

Query: 841  YGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 900
            YG+KDLILTGYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA
Sbjct: 1176 YGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 1235

Query: 901  CEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRP-----------LLIR 960
            CEAAKEAVWLR FL DLEVVPNM+ PITLYCDNSGAVANS+EPR             LIR
Sbjct: 1236 CEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIR 1295

Query: 961  EIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM 990
            EIV RGDVIVT+IAS HN+ADPFTK LTAKVFEGHLESLGLRDM
Sbjct: 1296 EIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDM 1339

[Close]

BLAST of Cmc11g0296811 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 292.0 bits (746), Expect = 1.8e-78
Identity = 165/460 (35.87%), Postives = 262/460 (56.96%), Query Frame = 0


Query: 479 EDPLSYKQAMNDVDKDNWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSA 538
           ++P +Y +A   +    W  AMD E+ +M     WE+  LP   KPIGCKW+YK K +S 
Sbjct: 84  KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 539 GKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 598
           G ++ +KARLVAKGYTQ+EG+D+ ETFSPV  L S++++L+I+  Y++ + Q+D+  AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 599 NGNLEESIFMSQPEGFIT-QGQE---QKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 658
           NG+L+E I+M  P G+   QG       VC L +SIYGLKQASR W ++F   +  +GF 
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 659 QNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEAQYVL 718
           Q+  +   + KI       +++YVDDI++  N+   + ++K+ L + F+++DLG  +Y L
Sbjct: 264 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 719 GIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEKSPKTPQEVED 778
           G++I R      + + Q  Y   LL    +   K   +P    V  S         +  D
Sbjct: 324 GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG----GDFVD 383

Query: 779 MRRIPYVSAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRTRDYM 838
            +   Y   +G LMY  + TR DI +AV  +S++   P L H   V  +L Y++ T    
Sbjct: 384 AK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 443

Query: 839 LVYGAK-DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 898
           L Y ++ ++ L  ++D+ FQ+ KD+R+ST+G    L    + W+S KQ  ++ S+ EAEY
Sbjct: 444 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 503

Query: 899 VAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAV 934
            A   A  E +WL +F  +L++   ++ P  L+CDN+ A+
Sbjct: 504 RALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAI 529

[Close]

BLAST of Cmc11g0296811 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 5.5e-22
Identity = 81/236 (34.32%), Postives = 117/236 (49.58%), Query Frame = 0


Query: 673 FLVLYVDDILLIGNDVGYLTDIKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQA 732
           +L+LYVDDILL G+    L  +   L++ F MKDLG   Y LGIQI        L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQT 61

Query: 733 TYIDKLLVRYSMQNSK--KGLLPFRHGVHLSKEKSPKTPQEVEDMRRIPYVSAVGSLMYA 792
            Y +++L    M + K     LP +    +S  K P    +  D R     S VG+L Y 
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP----DPSDFR-----SIVGALQYL 121

Query: 793 MLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIVLKYLRRTRDY-MLVYGAKDLILTGYTD 852
            L TRPDI YAV IV +    P L  +  +K VL+Y++ T  + + ++    L +  + D
Sbjct: 122 TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 853 SDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 906
           SD+     +R+ST+G    L    + W + +Q  ++ S+ E EY A    A E  W
Sbjct: 182 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc11g0296811 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 83.2 bits (204), Expect = 1.3e-15
Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 0


Query: 449 MPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDNWVKAMDLEMESMY 508
           M  RS   +++ N    LT T  +      ++P S   A+ D     W +AM  E++++ 
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTI-----KKEPKSVIFALKD---PGWCQAMQEELDALS 60

Query: 509 FNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPV 568
            N  W LV  P     +GCKW++K K  S G +   KARLVAKG+ Q EG+ + ET+SPV
Sbjct: 61  RNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPV 120

Query: 569 AMLKSIRILLSIA 582
               +IR +L++A
Sbjct: 121 VRTATIRTILNVA 125

[Close]

BLAST of Cmc11g0296811 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 8.2e-10
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 283 NRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHF 342
           NRT+++ VRSM+    LP +F   A  TAVHI+N  PS +++   P E+W    P+ S+ 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 343 RIWGCPAHVLVTNPKKLEPRSR 364
           R +GC A++   +  KL+PR++
Sbjct: 62  RRFGCVAYI-HCDEGKLKPRAK 82

[Close]

BLAST of Cmc11g0296811 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 60.5 bits (145), Expect = 9.0e-09
Identity = 30/75 (40.00%), Postives = 42/75 (56.00%), Query Frame = 0


Query: 114 NNTYLWHLRLGHINLDWIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKE 173
           + T LWH RL H++   +  LVK G L+  K  SL  CE C+ GK  +  F+   +  K 
Sbjct: 67  DETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKN 126

Query: 174 PLELIHSDLCGPMNV 189
           PL+ +HSDL G  +V
Sbjct: 127 PLDYVHSDLWGAPSV 141

The following BLAST results are available for this feature:

BLAST of Cmc11g0296811 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025945.1	0.0e+00	97.91	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0035907.1	0.0e+00	96.51	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0059226.1	0.0e+00	97.62	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0048404.1	0.0e+00	79.08	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	0.0e+00	79.08	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]

BLAST of Cmc11g0296811 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	3.9e-198	38.17	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.6e-133	29.98	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	1.5e-120	29.03	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	5.2e-118	28.19	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	3.8e-36	33.44	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc11g0296811 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZD0	0.0e+00	97.91	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7T2V9	0.0e+00	96.51	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]
A0A5A7UYE8	0.0e+00	97.62	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7SMH8	0.0e+00	79.08	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	0.0e+00	79.08	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]

BLAST of Cmc11g0296811 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.8e-78	35.87	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	5.5e-22	34.32	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	1.3e-15	36.09	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00710.1	8.2e-10	39.02	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
ATMG00300.1	9.0e-09	40.00	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 216..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 430..452
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 414..454
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 114..837
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 845..975 e-value: 3.2493E-53 score: 179.972
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 106..159 e-value: 1.2E-11 score: 44.3
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 510..753 e-value: 1.7E-74 score: 250.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 167..343 e-value: 8.0E-42 score: 144.8
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 172..273 e-value: 5.9E-12 score: 45.8
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 170..335 score: 24.711876
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 169..333
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 510..933

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0296811.1	Cmc11g0296811.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding