Cmc11g0296661 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTAAAGAATATACATACATCTTCCTTGGTTCGTTTTTTTGTTGTTCAAAATTTATCAAAACCATTTTGGCCCACAGAACTCAAGACTCCTTCTTCAACCTATACTCCCAATTATTATATTATATACATATATATAATGGCGATCTAAATCCACTTCTGATCTTTTCGTATCAATAACCTTCTAAACTCTCTCTCTTTGTGTTTGTGTCTTAAATTCCAGACTTCAGTCCAATCGCCAATATGTTAGGTTTGTTTTACCTCGTTTCACCTATGCGATTCCCCATCCTTTTCTTCAGCACTTTTCTGTGGATTCCTCTTTTTCGTATGAAGCAAGCCATTCTGGGCGTTGTGGCTACTGTTTTTGGCCTGCCCTCCTCCCCACAACATGGAACTGACCTTGTGGTGGTCAGGTCATACGATGAGGATCATGGAGGATCGTCGGAGGAGATTTGCTCCATCTGTTTGACGGAGTTTGGAAGATCAGAAGATTCGGTGTGTAAATTACCGAATTGTGAGCATTTATTTCATTTCAATTGCATCCAGGAATGGATTGACAGGAATCGCTTCACTTGTCCCCTATGTAGATGCTTCTTCTTGGAAGACAACCACAAGATGGACACCAAGTGGAGATTCCTCGTTCCTGATAATCCTTCCTCTCTCTATTACTTCCTGCAATGATTTGATCCTCTGTACATTTTGCTTTTTGATTTGGAAATTTGTAGTTCTTCAATTTCCATTTATTTCTCTGTA TTTTAAAGAATATACATACATCTTCCTTGGTTCGTTTTTTTGTTGTTCAAAATTTATCAAAACCATTTTGGCCCACAGAACTCAAGACTCCTTCTTCAACCTATACTCCCAATTATTATATTATATACATATATATAATGGCGATCTAAATCCACTTCTGATCTTTTCGTATCAATAACCTTCTAAACTCTCTCTCTTTGTGTTTGTGTCTTAAATTCCAGACTTCAGTCCAATCGCCAATATGTTAGGTTTGTTTTACCTCGTTTCACCTATGCGATTCCCCATCCTTTTCTTCAGCACTTTTCTGTGGATTCCTCTTTTTCGTATGAAGCAAGCCATTCTGGGCGTTGTGGCTACTGTTTTTGGCCTGCCCTCCTCCCCACAACATGGAACTGACCTTGTGGTGGTCAGGTCATACGATGAGGATCATGGAGGATCGTCGGAGGAGATTTGCTCCATCTGTTTGACGGAGTTTGGAAGATCAGAAGATTCGATGCTTCTTCTTGGAAGACAACCACAAGATGGACACCAAGTGGAGATTCCTCGTTCCTGATAATCCTTCCTCTCTCTATTACTTCCTGCAATGATTTGATCCTCTGTACATTTTGCTTTTTGATTTGGAAATTTGTAGTTCTTCAATTTCCATTTATTTCTCTGTA ATGTTAGGTTTGTTTTACCTCGTTTCACCTATGCGATTCCCCATCCTTTTCTTCAGCACTTTTCTGTGGATTCCTCTTTTTCGTATGAAGCAAGCCATTCTGGGCGTTGTGGCTACTGTTTTTGGCCTGCCCTCCTCCCCACAACATGGAACTGACCTTGTGGTGGTCAGGTCATACGATGAGGATCATGGAGGATCGTCGGAGGAGATTTGCTCCATCTGTTTGACGGAGTTTGGAAGATCAGAAGATTCGATGCTTCTTCTTGGAAGACAACCACAAGATGGACACCAAGTGGAGATTCCTCGTTCCTGA MLGLFYLVSPMRFPILFFSTFLWIPLFRMKQAILGVVATVFGLPSSPQHGTDLVVVRSYDEDHGGSSEEICSICLTEFGRSEDSMLLLGRQPQDGHQVEIPRS Homology
BLAST of Cmc11g0296661 vs. NCBI nr
Match: KAA0047798.1 (RING-H2 finger protein ATL18-like [Cucumis melo var. makuwa]) HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38 Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0
BLAST of Cmc11g0296661 vs. NCBI nr
Match: TYK01060.1 (RING-H2 finger protein ATL18-like [Cucumis melo var. makuwa]) HSP 1 Score: 167.5 bits (423), Expect = 5.9e-38 Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of Cmc11g0296661 vs. NCBI nr
Match: KAE8646816.1 (hypothetical protein Csa_004847 [Cucumis sativus]) HSP 1 Score: 162.5 bits (410), Expect = 1.9e-36 Identity = 83/93 (89.25%), Postives = 88/93 (94.62%), Query Frame = 0
BLAST of Cmc11g0296661 vs. NCBI nr
Match: XP_022944066.1 (RING-H2 finger protein ATL18-like [Cucurbita moschata] >KAG6570951.1 RING-H2 finger protein ATL18, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 76.3 bits (186), Expect = 1.8e-10 Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 0
BLAST of Cmc11g0296661 vs. NCBI nr
Match: XP_023512248.1 (RING-H2 finger protein ATL18-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 75.9 bits (185), Expect = 2.3e-10 Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 0
BLAST of Cmc11g0296661 vs. ExPASy TrEMBL
Match: A0A5A7TXY0 (RING-H2 finger protein ATL18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00410 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 5.7e-39 Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0
BLAST of Cmc11g0296661 vs. ExPASy TrEMBL
Match: A0A5D3BPT9 (RING-H2 finger protein ATL18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00740 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.8e-38 Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of Cmc11g0296661 vs. ExPASy TrEMBL
Match: A0A0A0KFW5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G117180 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 2.0e-28 Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 0
BLAST of Cmc11g0296661 vs. ExPASy TrEMBL
Match: A0A6J1FTE6 (RING-H2 finger protein ATL18-like OS=Cucurbita moschata OX=3662 GN=LOC111448616 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 8.6e-11 Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 0
BLAST of Cmc11g0296661 vs. ExPASy TrEMBL
Match: A0A6J1I5X8 (RING-H2 finger protein ATL18 OS=Cucurbita maxima OX=3661 GN=LOC111469894 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.4e-05 Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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