Cmc11g0296591 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0296591
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr11: 14905103 .. 14908329 (-)
RNA-Seq Expression	Cmc11g0296591
Synteny	Cmc11g0296591

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTATCTTATTCTCTAAGATAACCCTCTGCTGTCGCCGCCTCAGTTGAAGTTAAGATTGGTCTCTTTGGAAGCTTGAGGATTTAAAGTGATGAATTTTTTCATCAAGGATAAGAGGATTTTCCAACCTTCATCTGATTAACCTTGGTAAGCCAATAAAATTAAATTAATATTTTATTAATTTAATTTTGGATCTATTTGGGTTTTCTGTAAAAGGTTCAATTGGCTAAACCTTTTAAGATCTAAATCTTGGATTTTTCCCAATCAAGGTTGAATTGGTTTCAACCCCAATTTTTAGAAAGTTAATTAATTTGGGAGGATTTTTGGATGTTAGCCAATTGCTAATTTCATTAATTAAGATACTAAGTGTTCCTTTTATGATTAGGATCAAGTTAATTGGAGAATTTTACTGTCAACTAGTGAGTACCTTTGTTTGGCTAAAATCTCCAGGTAAGAGATTCTCCTACTAGACCTTCGAACTGAATTCAAGAGACCGCATGTAATTATGATTATGCATTGATGGTAGCTAAAATGCATAATTTGATGATAATGATTATACTGAGATTATGATGATAGTTGATGTTGATGATGATGACTGGGATTATTATGTTGATGATTGATGATGATGACTGATGTTATGTTAATGACCGGTAGTATGTTGTTGATGACTGTTGATGATTGTTAATGCATGATATATTAATCACATGATTAAGGACGTTAAGATTAATACTCATGCCATGTTATGATGTTATGTTATGCTACATGCTATGGATAGGGTGTTCTGTTAACTTTGTCTATTAGAGTCGTACCTGCATGGGTGTCCTTCAGGATCACCACCTATTTAGGACTGTGTGGTCCGACGGGACGCCAGTCTAGCATGGATATAGATATGATTCGAGTGATTCGACGGGGTCCTCGCATCCCGATTGTCTTAGTGTTTCCCCCGGGTTCACTACAGACCAGCATGTCCTAGGTGCTCCCTCGGGACACCGAAGACCAGATTTTCGTTCCTACGGGAGCGCATGTTGCACGTGTTCGGGAACGTGCCAGAGATTGGGTACCATTTTCAGGACTCTAATGGGAAGTTAACAGACACCTAGCGGGACTAGTAGTAGGTCCCTTACTGAGTATATGTTTATACTCACTCTTTCTATGTTTAACATTTCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAAAGAAGGATCCGTGACATGCCATATAGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAATATTCCGTTTTTAATGAAAATTTATTCTTCCCTCGTTTCAAAAGTGTCTCTTGTCATTGTTTCTTTTTAGTAACGACCTCAGCTTAGTATAAAGAGTTGGGTCGTTACAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTATAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCACATAAATCTCAATAGGATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGGCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGAAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAAGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAATTGTAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCGTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATTGTAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATATGA

mRNA sequence

CTTTATCTTATTCTCTAAGATAACCCTCTGCTGTCGCCGCCTCAGTTGAAGTTAAGATTGGTCTCTTTGGAAGCTTGAGGATTTAAAGTGATGAATTTTTTCATCAAGGATAAGAGGATTTTCCAACCTTCATCTGATTAACCTTGGATCAAGTTAATTGGAGAATTTTACTGTCAACTAGTGAGTACCTTTGTTTGGCTAAAATCTCCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAAAGAAGGATCCGTGACATGCCATATAGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAATATTCCGTTTTTAATGAAAATTTATTCTTCCCTCGTTTCAAAAGTGTCTCTTGTCATTGTTTCTTTTTAGTAACGACCTCAGCTTAGTATAAAGAGTTGGGTCGTTACAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTATAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCACATAAATCTCAATAGGATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGGCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGAAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAAGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAATTGTAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCGTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATTGTAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATATGA

Coding sequence (CDS)

ATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCACATAAATCTCAATAGGATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGGCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGAAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAAGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAATTGTAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCGTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATTGTAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATATGA

Protein sequence

MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESWLEGKMTKRPFTEKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQIVVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNCNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI

Homology

[Close]

BLAST of Cmc11g0296591 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1115.1 bits (2883), Expect = 0.0e+00
Identity = 545/550 (99.09%), Postives = 545/550 (99.09%), Query Frame = 0


Query: 1   MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESWLE 60
           MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCES LE
Sbjct: 431 MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLE 490

Query: 61  GKMTKRPFTEKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 120
           GKMTKRPFT KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK
Sbjct: 491 GKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 550

Query: 121 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 180
           SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN
Sbjct: 551 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 610

Query: 181 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQIVVYILNCVPSKSVSETPLKLWNGRKG 240
           GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ  VYILNCVPSKSVSETPLKLWNGRKG
Sbjct: 611 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG 670

Query: 241 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 300
           SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Sbjct: 671 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 730

Query: 301 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 360
           EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR
Sbjct: 731 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 790

Query: 361 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 420
           SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV
Sbjct: 791 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 850

Query: 421 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 480
           WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK
Sbjct: 851 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 910

Query: 481 SIRILLSIAAYFDYEIWQMDVKTAFLNCNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 540
           SIRILLSIAAYFDYEIWQMDVKTAFLN NLEETIYMQQPEGFIIPGQEQKICKLNRSIYG
Sbjct: 911 SIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 970

Query: 541 LKQASRSWNI 551
           LKQASRSWNI
Sbjct: 971 LKQASRSWNI 980

[Close]

BLAST of Cmc11g0296591 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1115.1 bits (2883), Expect = 0.0e+00
Identity = 545/550 (99.09%), Postives = 545/550 (99.09%), Query Frame = 0


Query: 1   MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESWLE 60
           MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCES LE
Sbjct: 432 MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLE 491

Query: 61  GKMTKRPFTEKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 120
           GKMTKRPFT KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK
Sbjct: 492 GKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 551

Query: 121 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 180
           SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN
Sbjct: 552 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 611

Query: 181 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQIVVYILNCVPSKSVSETPLKLWNGRKG 240
           GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ  VYILNCVPSKSVSETPLKLWNGRKG
Sbjct: 612 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG 671

Query: 241 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 300
           SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Sbjct: 672 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 731

Query: 301 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 360
           EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR
Sbjct: 732 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 791

Query: 361 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 420
           SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV
Sbjct: 792 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 851

Query: 421 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 480
           WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK
Sbjct: 852 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 911

Query: 481 SIRILLSIAAYFDYEIWQMDVKTAFLNCNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 540
           SIRILLSIAAYFDYEIWQMDVKTAFLN NLEETIYMQQPEGFIIPGQEQKICKLNRSIYG
Sbjct: 912 SIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 971

Query: 541 LKQASRSWNI 551
           LKQASRSWNI
Sbjct: 972 LKQASRSWNI 981

[Close]

BLAST of Cmc11g0296591 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1115.1 bits (2883), Expect = 0.0e+00
Identity = 545/550 (99.09%), Postives = 545/550 (99.09%), Query Frame = 0


Query: 1   MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESWLE 60
           MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCES LE
Sbjct: 432 MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLE 491

Query: 61  GKMTKRPFTEKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 120
           GKMTKRPFT KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK
Sbjct: 492 GKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 551

Query: 121 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 180
           SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN
Sbjct: 552 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 611

Query: 181 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQIVVYILNCVPSKSVSETPLKLWNGRKG 240
           GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ  VYILNCVPSKSVSETPLKLWNGRKG
Sbjct: 612 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG 671

Query: 241 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 300
           SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Sbjct: 672 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 731

Query: 301 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 360
           EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR
Sbjct: 732 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 791

Query: 361 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 420
           SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV
Sbjct: 792 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 851

Query: 421 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 480
           WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK
Sbjct: 852 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 911

Query: 481 SIRILLSIAAYFDYEIWQMDVKTAFLNCNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 540
           SIRILLSIAAYFDYEIWQMDVKTAFLN NLEETIYMQQPEGFIIPGQEQKICKLNRSIYG
Sbjct: 912 SIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 971

Query: 541 LKQASRSWNI 551
           LKQASRSWNI
Sbjct: 972 LKQASRSWNI 981

[Close]

BLAST of Cmc11g0296591 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1115.1 bits (2883), Expect = 0.0e+00
Identity = 545/550 (99.09%), Postives = 545/550 (99.09%), Query Frame = 0


Query: 1   MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESWLE 60
           MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCES LE
Sbjct: 432 MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLE 491

Query: 61  GKMTKRPFTEKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 120
           GKMTKRPFT KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK
Sbjct: 492 GKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 551

Query: 121 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 180
           SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN
Sbjct: 552 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 611

Query: 181 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQIVVYILNCVPSKSVSETPLKLWNGRKG 240
           GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ  VYILNCVPSKSVSETPLKLWNGRKG
Sbjct: 612 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG 671

Query: 241 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 300
           SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Sbjct: 672 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 731

Query: 301 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 360
           EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR
Sbjct: 732 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 791

Query: 361 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 420
           SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV
Sbjct: 792 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 851

Query: 421 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 480
           WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK
Sbjct: 852 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 911

Query: 481 SIRILLSIAAYFDYEIWQMDVKTAFLNCNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 540
           SIRILLSIAAYFDYEIWQMDVKTAFLN NLEETIYMQQPEGFIIPGQEQKICKLNRSIYG
Sbjct: 912 SIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 971

Query: 541 LKQASRSWNI 551
           LKQASRSWNI
Sbjct: 972 LKQASRSWNI 981

[Close]

BLAST of Cmc11g0296591 vs. NCBI nr
Match: TYK26319.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1115.1 bits (2883), Expect = 0.0e+00
Identity = 545/550 (99.09%), Postives = 545/550 (99.09%), Query Frame = 0


Query: 1   MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESWLE 60
           MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCES LE
Sbjct: 432 MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLE 491

Query: 61  GKMTKRPFTEKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 120
           GKMTKRPFT KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK
Sbjct: 492 GKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 551

Query: 121 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 180
           SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN
Sbjct: 552 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 611

Query: 181 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQIVVYILNCVPSKSVSETPLKLWNGRKG 240
           GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ  VYILNCVPSKSVSETPLKLWNGRKG
Sbjct: 612 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG 671

Query: 241 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 300
           SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Sbjct: 672 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 731

Query: 301 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 360
           EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR
Sbjct: 732 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 791

Query: 361 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 420
           SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV
Sbjct: 792 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 851

Query: 421 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 480
           WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK
Sbjct: 852 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 911

Query: 481 SIRILLSIAAYFDYEIWQMDVKTAFLNCNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 540
           SIRILLSIAAYFDYEIWQMDVKTAFLN NLEETIYMQQPEGFIIPGQEQKICKLNRSIYG
Sbjct: 912 SIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 971

Query: 541 LKQASRSWNI 551
           LKQASRSWNI
Sbjct: 972 LKQASRSWNI 981

[Close]

BLAST of Cmc11g0296591 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 9.6e-106
Identity = 212/557 (38.06%), Postives = 318/557 (57.09%), Query Frame = 0


Query: 22  LWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESWLEGKMTKRPFTEKGHRAKEPLEL 81
           LWH R+GH++   ++ L K  L+S  +  ++  C+  L GK  +  F     R    L+L
Sbjct: 424 LWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDL 483

Query: 82  VHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKT 141
           V+SD+CGPM +++ GG +YF+TF DD SR  +VY+++ K +  + F+++ A VE    + 
Sbjct: 484 VYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRK 543

Query: 142 IKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA 201
           +K  RSD GGEY   +F+ Y    GI  + + PGTPQ NGV+ER NRT+++ VRSM+  A
Sbjct: 544 LKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMA 603

Query: 202 HLPNSFWGYAVQIVVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCP--AHVLENN 261
            LP SFWG AVQ   Y++N  PS  ++ E P ++W  ++ S  H +++GC   AHV +  
Sbjct: 604 KLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQ 663

Query: 262 PKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNE 321
             KL+ +S  C+F+GY     G   +DP   KV  S +  F  E  +R     S+ V N 
Sbjct: 664 RTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVF-RESEVRTAADMSEKVKNG 723

Query: 322 L----------------SKETTEPSTRVVEEP-----------SALTRVVHVGSSTRTHQ 381
           +                ++ TT+  +   E+P             +  V H       HQ
Sbjct: 724 IIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQ 783

Query: 382 PQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLE 441
           P      RRS R      RY S TE + +  D    +P + K+ +   +K++ +KAM  E
Sbjct: 784 PL-----RRSERPRVESRRYPS-TEYVLISDD---REPESLKEVLSHPEKNQLMKAMQEE 843

Query: 442 LESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEE 501
           +ES+  N  + LV+ P G +P+ CKW++K K+  D K+  +KARLV KG+ Q +G+D++E
Sbjct: 844 MESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDE 903

Query: 502 TFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNCNLEETIYMQQPEGFIIPGQEQKI 549
            FSPV  + SIR +LS+AA  D E+ Q+DVKTAFL+ +LEE IYM+QPEGF + G++  +
Sbjct: 904 IFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMV 963

[Close]

BLAST of Cmc11g0296591 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 289.7 bits (740), Expect = 7.2e-77
Identity = 196/640 (30.63%), Postives = 304/640 (47.50%), Query Frame = 0


Query: 17   KENAHLWHLRLGHINLNRIERLVKNGLLSELE-----ENSLPVCESWLEGKMTKRPF--- 76
            K N  LWH R GHI+  ++  + +  + S+       E S  +CE  L GK  + PF   
Sbjct: 412  KNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQL 471

Query: 77   TEKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFK 136
             +K H  K PL +VHSD+CGP+         YF+ F D ++ Y   YL+++KS+    F+
Sbjct: 472  KDKTH-IKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQ 531

Query: 137  EYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNR 196
            ++ A+ E   +  +     D G EY+  + + + ++ GI   L+ P TPQ NGVSER  R
Sbjct: 532  DFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIR 591

Query: 197  TLLDMVRSMMSYAHLPNSFWGYAVQIVVYILNCVPSKSV---SETPLKLWNGRKGSLRHF 256
            T+ +  R+M+S A L  SFWG AV    Y++N +PS+++   S+TP ++W+ +K  L+H 
Sbjct: 592  TITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHL 651

Query: 257  RIWGCPAHV-LENNPKKLEPRSKLCLFVGY-PKG-------------------------- 316
            R++G   +V ++N   K + +S   +FVGY P G                          
Sbjct: 652  RVFGATVYVHIKNKQGKFDDKSFKSIFVGYEPNGFKLWDAVNEKFIVARDVVVDETNMVN 711

Query: 317  TRGGYFYD--------------PKDNKVFVST----------NATFLEEDHIREHK---- 376
            +R   F                P D++  + T          N  FL++    E+K    
Sbjct: 712  SRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPN 771

Query: 377  PRSKIVLNELS------------KETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRE 436
               KI+  E              K++ E +   + E     R  H+  S  +  P   RE
Sbjct: 772  DSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRE 831

Query: 437  P------------------------RRSGRVTNLP-IRYMSLTETL--TVISDGDI--ED 496
                                     RRS R+   P I Y     +L   V++   I  + 
Sbjct: 832  SETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDV 891

Query: 497  PLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGK 549
            P +F +     DK  W +A+N EL +   N+ W +  +P+    +  +W++  K    G 
Sbjct: 892  PNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGN 951

[Close]

BLAST of Cmc11g0296591 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.5e-66
Identity = 185/663 (27.90%), Postives = 291/663 (43.89%), Query Frame = 0


Query: 15   SPKENAHLWHLRLGHINLNRIERLVKNGLLSELE-ENSLPVCESWLEGKMTKRPFTEKGH 74
            S K     WH RLGH   + +  ++ N  LS L   +    C   L  K  K PF++   
Sbjct: 459  SSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTI 518

Query: 75   RAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAE 134
             +  PLE ++SD+     + +   + Y++ F D ++RY ++Y ++ KS+  E F  +K  
Sbjct: 519  NSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNL 578

Query: 135  VENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDM 194
            +EN     I TF SD GGE++ L    Y  + GI    S P TP+ NG+SER++R +++ 
Sbjct: 579  LENRFQTRIGTFYSDNGGEFVAL--WEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVET 638

Query: 195  VRSMMSYAHLPNSFWGYAVQIVVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPA 254
              +++S+A +P ++W YA  + VY++N +P+  +  E+P +   G   +    R++GC  
Sbjct: 639  GLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCAC 698

Query: 255  H--VLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE-------- 314
            +  +   N  KL+ +S+ C+F+GY            + +++++S +  F E         
Sbjct: 699  YPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYL 758

Query: 315  ---DHIREHKPRSKIVLNELSKETTEPSTRVV----------------EEPSALTRVVHV 374
                 ++E +  S  V    S  TT P+   V                  PSA  R   V
Sbjct: 759  ATLSPVQEQRRESSCV---WSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQV 818

Query: 375  GSS----------------------------------TRTHQ-----------------P 434
             SS                                  T+TH                   
Sbjct: 819  SSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLA 878

Query: 435  QSLREPRRSGRVTNLPIRYMSLTET--------------LTVISDGDIEDPLTF------ 494
            QSL  P +S   +  P    S + T              L  I + + + PL        
Sbjct: 879  QSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTR 938

Query: 495  ------------------------KKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPD 551
                                    + A++ +  + W  AM  E+ +   N  WDLV  P 
Sbjct: 939  AKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPP 998

[Close]

BLAST of Cmc11g0296591 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-63
Identity = 183/660 (27.73%), Postives = 289/660 (43.79%), Query Frame = 0


Query: 23   WHLRLGHINLNRIERLVKNGLLSELE-ENSLPVCESWLEGKMTKRPFTEKGHRAKEPLEL 82
            WH RLGH +L  +  ++ N  L  L   + L  C      K  K PF+     + +PLE 
Sbjct: 446  WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEY 505

Query: 83   VHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKT 142
            ++SD+     + +   + Y++ F D ++RY ++Y ++ KS+  + F  +K+ VEN     
Sbjct: 506  IYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 565

Query: 143  IKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA 202
            I T  SD GGE++ L+  +YL + GI    S P TP+ NG+SER++R +++M  +++S+A
Sbjct: 566  IGTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHA 625

Query: 203  HLPNSFWGYAVQIVVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENN 262
             +P ++W YA  + VY++N +P+  +  ++P +   G+  +    +++GC  +  +   N
Sbjct: 626  SVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYN 685

Query: 263  PKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE---------DHIREHK 322
              KLE +SK C F+GY               +++ S +  F E                +
Sbjct: 686  RHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQE 745

Query: 323  PRSKIVLNELSKETTEPSTRVV------------------EEPSAL-------------- 382
             RS    N  S  TT P+T +V                    PS L              
Sbjct: 746  QRSDSAPNWPS-HTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSS 805

Query: 383  ---------TRVVHVG--SSTRTHQPQ-----------------SLREPRRSGRVTNLPI 442
                     T   H G   + + HQ Q                 S   P ++  +   PI
Sbjct: 806  ISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPI 865

Query: 443  RYMSLTETLTVISDGDI------------------------------------------- 502
                +    T IS+ +                                            
Sbjct: 866  SSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIR 925

Query: 503  ---------------EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLV-DQPDGV 551
                            +P T  +AM+D   D W +AM  E+ +   N  WDLV   P  V
Sbjct: 926  KPNQKYSYATSLAANSEPRTAIQAMKD---DRWRQAMGSEINAQIGNHTWDLVPPPPPSV 985

[Close]

BLAST of Cmc11g0296591 vs. ExPASy Swiss-Prot
Match: Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-24
Identity = 87/317 (27.44%), Postives = 143/317 (45.11%), Query Frame = 0


Query: 3   KTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLP-------VC 62
           K  I    + K   K    L H  LGH N   I++ +K   ++ L+E+ +         C
Sbjct: 574 KLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQC 633

Query: 63  ESWLEGKMTKRPFTEKGHRAK-----EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSR 122
              L GK TK     KG R K     EP + +H+D+ GP++   +    YFI+FTD+ +R
Sbjct: 634 PDCLIGKSTKHRHV-KGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTR 693

Query: 123 YGYVYLMQHKSE--ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIV 182
           + +VY +  + E   L  F    A ++N  +  +   + DRG EY +     +    GI 
Sbjct: 694 FQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGIT 753

Query: 183 SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQIVVYILNCVPSKSVS 242
           +  +     + +GV+ER NRTLL+  R+++  + LPN  W  AV+    I N + S   +
Sbjct: 754 ACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPK-N 813

Query: 243 ETPLKLWNGRKG-SLRHFRIWGCPAHVLENNP-KKLEPRSKLCLFVGYPKGTRGGYFYDP 302
           +   +   G  G  +     +G P  V  +NP  K+ PR      +   + + G   Y P
Sbjct: 814 DKSARQHAGLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLP 873

Query: 303 KDNKVFVSTNATFLEED 304
              K   +TN   L+++
Sbjct: 874 SLKKTVDTTNYVILQDN 888

[Close]

BLAST of Cmc11g0296591 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 1115.1 bits (2883), Expect = 0.0e+00
Identity = 545/550 (99.09%), Postives = 545/550 (99.09%), Query Frame = 0


Query: 1   MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESWLE 60
           MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCES LE
Sbjct: 432 MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLE 491

Query: 61  GKMTKRPFTEKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 120
           GKMTKRPFT KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK
Sbjct: 492 GKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 551

Query: 121 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 180
           SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN
Sbjct: 552 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 611

Query: 181 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQIVVYILNCVPSKSVSETPLKLWNGRKG 240
           GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ  VYILNCVPSKSVSETPLKLWNGRKG
Sbjct: 612 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG 671

Query: 241 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 300
           SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Sbjct: 672 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 731

Query: 301 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 360
           EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR
Sbjct: 732 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 791

Query: 361 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 420
           SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV
Sbjct: 792 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 851

Query: 421 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 480
           WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK
Sbjct: 852 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 911

Query: 481 SIRILLSIAAYFDYEIWQMDVKTAFLNCNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 540
           SIRILLSIAAYFDYEIWQMDVKTAFLN NLEETIYMQQPEGFIIPGQEQKICKLNRSIYG
Sbjct: 912 SIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 971

Query: 541 LKQASRSWNI 551
           LKQASRSWNI
Sbjct: 972 LKQASRSWNI 981

[Close]

BLAST of Cmc11g0296591 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 1115.1 bits (2883), Expect = 0.0e+00
Identity = 545/550 (99.09%), Postives = 545/550 (99.09%), Query Frame = 0


Query: 1   MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESWLE 60
           MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCES LE
Sbjct: 432 MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLE 491

Query: 61  GKMTKRPFTEKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 120
           GKMTKRPFT KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK
Sbjct: 492 GKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 551

Query: 121 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 180
           SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN
Sbjct: 552 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 611

Query: 181 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQIVVYILNCVPSKSVSETPLKLWNGRKG 240
           GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ  VYILNCVPSKSVSETPLKLWNGRKG
Sbjct: 612 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG 671

Query: 241 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 300
           SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Sbjct: 672 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 731

Query: 301 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 360
           EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR
Sbjct: 732 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 791

Query: 361 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 420
           SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV
Sbjct: 792 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 851

Query: 421 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 480
           WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK
Sbjct: 852 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 911

Query: 481 SIRILLSIAAYFDYEIWQMDVKTAFLNCNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 540
           SIRILLSIAAYFDYEIWQMDVKTAFLN NLEETIYMQQPEGFIIPGQEQKICKLNRSIYG
Sbjct: 912 SIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 971

Query: 541 LKQASRSWNI 551
           LKQASRSWNI
Sbjct: 972 LKQASRSWNI 981

[Close]

BLAST of Cmc11g0296591 vs. ExPASy TrEMBL
Match: A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1)

HSP 1 Score: 1115.1 bits (2883), Expect = 0.0e+00
Identity = 545/550 (99.09%), Postives = 545/550 (99.09%), Query Frame = 0


Query: 1    MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESWLE 60
            MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCES LE
Sbjct: 549  MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLE 608

Query: 61   GKMTKRPFTEKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 120
            GKMTKRPFT KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK
Sbjct: 609  GKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 668

Query: 121  SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 180
            SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN
Sbjct: 669  SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 728

Query: 181  GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQIVVYILNCVPSKSVSETPLKLWNGRKG 240
            GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ  VYILNCVPSKSVSETPLKLWNGRKG
Sbjct: 729  GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG 788

Query: 241  SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 300
            SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Sbjct: 789  SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 848

Query: 301  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 360
            EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR
Sbjct: 849  EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 908

Query: 361  SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 420
            SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV
Sbjct: 909  SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 968

Query: 421  WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 480
            WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK
Sbjct: 969  WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 1028

Query: 481  SIRILLSIAAYFDYEIWQMDVKTAFLNCNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 540
            SIRILLSIAAYFDYEIWQMDVKTAFLN NLEETIYMQQPEGFIIPGQEQKICKLNRSIYG
Sbjct: 1029 SIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 1088

Query: 541  LKQASRSWNI 551
            LKQASRSWNI
Sbjct: 1089 LKQASRSWNI 1098

[Close]

BLAST of Cmc11g0296591 vs. ExPASy TrEMBL
Match: A0A5D3DS88 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G001000 PE=4 SV=1)

HSP 1 Score: 1115.1 bits (2883), Expect = 0.0e+00
Identity = 545/550 (99.09%), Postives = 545/550 (99.09%), Query Frame = 0


Query: 1   MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESWLE 60
           MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCES LE
Sbjct: 432 MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLE 491

Query: 61  GKMTKRPFTEKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 120
           GKMTKRPFT KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK
Sbjct: 492 GKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 551

Query: 121 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 180
           SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN
Sbjct: 552 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 611

Query: 181 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQIVVYILNCVPSKSVSETPLKLWNGRKG 240
           GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ  VYILNCVPSKSVSETPLKLWNGRKG
Sbjct: 612 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG 671

Query: 241 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 300
           SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Sbjct: 672 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 731

Query: 301 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 360
           EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR
Sbjct: 732 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 791

Query: 361 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 420
           SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV
Sbjct: 792 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 851

Query: 421 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 480
           WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK
Sbjct: 852 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 911

Query: 481 SIRILLSIAAYFDYEIWQMDVKTAFLNCNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 540
           SIRILLSIAAYFDYEIWQMDVKTAFLN NLEETIYMQQPEGFIIPGQEQKICKLNRSIYG
Sbjct: 912 SIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 971

Query: 541 LKQASRSWNI 551
           LKQASRSWNI
Sbjct: 972 LKQASRSWNI 981

[Close]

BLAST of Cmc11g0296591 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 1115.1 bits (2883), Expect = 0.0e+00
Identity = 545/550 (99.09%), Postives = 545/550 (99.09%), Query Frame = 0


Query: 1   MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESWLE 60
           MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCES LE
Sbjct: 432 MFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLE 491

Query: 61  GKMTKRPFTEKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 120
           GKMTKRPFT KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK
Sbjct: 492 GKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK 551

Query: 121 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 180
           SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN
Sbjct: 552 SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQN 611

Query: 181 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQIVVYILNCVPSKSVSETPLKLWNGRKG 240
           GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ  VYILNCVPSKSVSETPLKLWNGRKG
Sbjct: 612 GVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG 671

Query: 241 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 300
           SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL
Sbjct: 672 SLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 731

Query: 301 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 360
           EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR
Sbjct: 732 EEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRR 791

Query: 361 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 420
           SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV
Sbjct: 792 SGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 851

Query: 421 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 480
           WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK
Sbjct: 852 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 911

Query: 481 SIRILLSIAAYFDYEIWQMDVKTAFLNCNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 540
           SIRILLSIAAYFDYEIWQMDVKTAFLN NLEETIYMQQPEGFIIPGQEQKICKLNRSIYG
Sbjct: 912 SIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 971

Query: 541 LKQASRSWNI 551
           LKQASRSWNI
Sbjct: 972 LKQASRSWNI 981

[Close]

BLAST of Cmc11g0296591 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 156.8 bits (395), Expect = 5.1e-38
Identity = 74/166 (44.58%), Postives = 110/166 (66.27%), Query Frame = 0


Query: 387 EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGAD 446
           ++P T+ +A E +    W  AM+ E+ +M     W++   P   KPIGCKW+YK K  +D
Sbjct: 84  KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 447 GKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFL 506
           G ++ +KARLVAKGYTQ EG+D+ ETFSPV  L S++++L+I+A +++ + Q+D+  AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 507 NCNLEETIYMQQPEGFIIPGQE----QKICKLNRSIYGLKQASRSW 549
           N +L+E IYM+ P G+     +      +C L +SIYGLKQASR W
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQW 246

[Close]

BLAST of Cmc11g0296591 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 84.0 bits (206), Expect = 4.2e-16
Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = 0


Query: 359 RRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFN 418
           R    +  L  +Y SLT T T+      ++P +   A++D     W +AM  EL+++  N
Sbjct: 4   RSKAGINKLNPKY-SLTITTTI-----KKEPKSVIFALKD---PGWCQAMQEELDALSRN 63

Query: 419 SVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAM 478
             W LV  P     +GCKW++K K  +DG +   KARLVAKG+ Q EG+ + ET+SPV  
Sbjct: 64  KTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVR 123

Query: 479 LKSIRILLSIA 490
             +IR +L++A
Sbjct: 124 TATIRTILNVA 125

[Close]

BLAST of Cmc11g0296591 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 64.7 bits (156), Expect = 2.7e-10
Identity = 33/86 (38.37%), Postives = 45/86 (52.33%), Query Frame = 0


Query: 7   TQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESWLEGKMTKR 66
           T    L  + K+   LWH RL H++   +E LVK G L   + +SL  CE  + GK  + 
Sbjct: 56  TGESNLAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRV 115

Query: 67  PFTEKGHRAKEPLELVHSDLCGPMNV 93
            F+   H  K PL+ VHSDL G  +V
Sbjct: 116 NFSTGQHTTKNPLDYVHSDLWGAPSV 141

[Close]

BLAST of Cmc11g0296591 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 4.0e-06
Identity = 27/82 (32.93%), Postives = 47/82 (57.32%), Query Frame = 0


Query: 187 NRTLLDMVRSMMSYAHLPNSFWGYAVQIVVYILNCVPSKSVS-ETPLKLWNGRKGSLRHF 246
           NRT+++ VRSM+    LP +F   A    V+I+N  PS +++   P ++W     +  + 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 247 RIWGCPAHVLENNPKKLEPRSK 268
           R +GC A++   +  KL+PR+K
Sbjct: 62  RRFGCVAYI-HCDEGKLKPRAK 82

The following BLAST results are available for this feature:

BLAST of Cmc11g0296591 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048404.1	0.0e+00	99.09	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	0.0e+00	99.09	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	0.0e+00	99.09	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	0.0e+00	99.09	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]
TYK26319.1	0.0e+00	99.09	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0296591 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	9.6e-106	38.06	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	7.2e-77	30.63	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	1.5e-66	27.90	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.2e-63	27.73	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q12491	1.1e-24	27.44	Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc11g0296591 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	0.0e+00	99.09	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	0.0e+00	99.09	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7V4M1	0.0e+00	99.09	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0093...	[more]
A0A5D3DS88	0.0e+00	99.09	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00100...	[more]
A0A5A7TWB9	0.0e+00	99.09	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]

BLAST of Cmc11g0296591 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	5.1e-38	44.58	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	4.2e-16	37.40	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00300.1	2.7e-10	38.37	Gag-Pol-related retrotransposon family protein	[more]
ATMG00710.1	4.0e-06	32.93	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 120..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..361
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 24..549
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 16..63 e-value: 5.5E-12 score: 45.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 69..248 e-value: 4.6E-39 score: 135.8
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 418..549 e-value: 4.1E-50 score: 170.7
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 76..177 e-value: 3.2E-11 score: 43.4
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 74..239 score: 23.492319
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 418..549
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 74..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0296591.1	Cmc11g0296591.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding