Cmc11g0296581 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0296581
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr11: 14904017 .. 14904922 (-)
RNA-Seq Expression	Cmc11g0296581
Synteny	Cmc11g0296581

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGACCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATCTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACATGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCATTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAACTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCACTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

mRNA sequence

ATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGACCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATCTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACATGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCATTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAACTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCACTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

Coding sequence (CDS)

ATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGACCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATCTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACATGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCATTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAACTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCACTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

Protein sequence

MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT

Homology

[Close]

BLAST of Cmc11g0296581 vs. NCBI nr
Match: TYJ97618.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 605.9 bits (1561), Expect = 1.9e-169
Identity = 299/301 (99.34%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 828  MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 887

Query: 61   QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120
            QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI
Sbjct: 888  QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 947

Query: 121  LKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVF LNGGAVVWRSIKQGC
Sbjct: 948  LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1007

Query: 181  IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK
Sbjct: 1008 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1067

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 300
            RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1068 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1127

Query: 301  T 302
            T
Sbjct: 1128 T 1128

[Close]

BLAST of Cmc11g0296581 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 605.9 bits (1561), Expect = 1.9e-169
Identity = 299/301 (99.34%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 1042 MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 1101

Query: 61   QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120
            QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI
Sbjct: 1102 QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 1161

Query: 121  LKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVF LNGGAVVWRSIKQGC
Sbjct: 1162 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1221

Query: 181  IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK
Sbjct: 1222 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1281

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 300
            RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1282 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1341

Query: 301  T 302
            T
Sbjct: 1342 T 1342

[Close]

BLAST of Cmc11g0296581 vs. NCBI nr
Match: TYK19524.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 605.9 bits (1561), Expect = 1.9e-169
Identity = 299/301 (99.34%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1   MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
           MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 1   MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60

Query: 61  QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120
           QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI
Sbjct: 61  QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120

Query: 121 LKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQGC 180
           LKYLRRTRDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVF LNGGAVVWRSIKQGC
Sbjct: 121 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 180

Query: 181 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 240
           IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK
Sbjct: 181 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 240

Query: 241 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 300
           RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 241 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 300

Query: 301 T 302
           T
Sbjct: 301 T 301

[Close]

BLAST of Cmc11g0296581 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 605.9 bits (1561), Expect = 1.9e-169
Identity = 299/301 (99.34%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 1043 MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 1102

Query: 61   QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120
            QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI
Sbjct: 1103 QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 1162

Query: 121  LKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVF LNGGAVVWRSIKQGC
Sbjct: 1163 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1222

Query: 181  IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK
Sbjct: 1223 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1282

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 300
            RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1283 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1342

Query: 301  T 302
            T
Sbjct: 1343 T 1343

[Close]

BLAST of Cmc11g0296581 vs. NCBI nr
Match: KAA0026233.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 605.9 bits (1561), Expect = 1.9e-169
Identity = 299/301 (99.34%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 902  MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 961

Query: 61   QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120
            QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI
Sbjct: 962  QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 1021

Query: 121  LKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVF LNGGAVVWRSIKQGC
Sbjct: 1022 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1081

Query: 181  IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK
Sbjct: 1082 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1141

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 300
            RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1142 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1201

Query: 301  T 302
            T
Sbjct: 1202 T 1202

[Close]

BLAST of Cmc11g0296581 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 7.9e-70
Identity = 136/294 (46.26%), Postives = 191/294 (64.97%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLG AQ +LG++I R+R ++ L LSQ  YI++++ +++M+N+K    P    + LSK+
Sbjct: 1035 MKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKK 1094

Query: 61   QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120
             CP T ++   M  +PY+SAVGSLMYAM+CTRPDI +AVG+VSR+  NPG  HW AVK I
Sbjct: 1095 MCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWI 1154

Query: 121  LKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQGC 180
            L+YLR T    L +G  D IL GYTD+D   D D+RKS++G +F  +GGA+ W+S  Q C
Sbjct: 1155 LRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKC 1214

Query: 181  IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 240
            +A ST EAEY+AA E  KE +WL+ FL +L +     K   +YCD+  A+  S+    H 
Sbjct: 1215 VALSTTEAEYIAATETGKEMIWLKRFLQELGL---HQKEYVVYCDSQSAIDLSKNSMYHA 1274

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGL 295
            R KHI+ +YH IRE+V    + V +I++  N AD  TK +    FE   E +G+
Sbjct: 1275 RTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325

[Close]

BLAST of Cmc11g0296581 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 180.6 bits (457), Expect = 2.6e-44
Identity = 109/303 (35.97%), Postives = 164/303 (54.13%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLP----FRHGVT 60
            M DL E +  +GI+I  + +   + LSQ++Y+ KI+ K++M+N      P      + + 
Sbjct: 1114 MTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELL 1173

Query: 61   LSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTA 120
             S E C           + P  S +G LMY MLCTRPD+  AV I+SRY S      W  
Sbjct: 1174 NSDEDC-----------NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQN 1233

Query: 121  VKTILKYLRRTRDYMLVYGSKDLI----LTGYTDSDFQTDRDSRKSTSGSVF-ILNGGAV 180
            +K +L+YL+ T D  L++  K+L     + GY DSD+      RKST+G +F + +   +
Sbjct: 1234 LKRVLRYLKGTIDMKLIF-KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLI 1293

Query: 181  VWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVA 240
             W + +Q  +A S+ EAEY+A  EA +EA+WL+  L  + +   +  PI +Y DN G ++
Sbjct: 1294 CWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI--KLENPIKIYEDNQGCIS 1353

Query: 241  NSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLES 295
             +  P  HKR KHI+ KYH  RE V    + +  I + + +AD FTKPL A  F    + 
Sbjct: 1354 IANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDK 1400

[Close]

BLAST of Cmc11g0296581 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.4e-34
Identity = 96/299 (32.11%), Postives = 144/299 (48.16%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            +K+  +  + LGI+    R  + L LSQ  Y   ++ + +M  +K    P      L+  
Sbjct: 1160 VKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLH 1219

Query: 61   QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120
               K P   E      Y   VGSL Y +  TRPD+ YAV  +S+Y   P   HW A+K +
Sbjct: 1220 SGTKLPDPTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRV 1279

Query: 121  LKYLRRTRDY-MLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQG 180
            L+YL  T D+ + +     L L  Y+D+D+  D D   ST+G +  L    + W S KQ 
Sbjct: 1280 LRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQK 1339

Query: 181  CIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSH 240
             +  S+ EAEY +    + E  W+ + L +L +   +S P  +YCDN GA      P  H
Sbjct: 1340 GVVRSSTEAEYRSVANTSSELQWICSLLTELGI--QLSHPPVIYCDNVGATYLCANPVFH 1399

Query: 241  KRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMP 299
             R KHI   YH IR  V  G + V  +++   +AD  TKPL+   F+     +G+  +P
Sbjct: 1400 SRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVP 1447

[Close]

BLAST of Cmc11g0296581 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.7e-33
Identity = 97/299 (32.44%), Postives = 144/299 (48.16%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            +KD  E  + LGI+    R    L LSQ  YI  ++ + +M  +K    P      LS  
Sbjct: 1177 VKDHEELHYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLY 1236

Query: 61   QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120
               K     E      Y   VGSL Y +  TRPDI YAV  +S++   P   H  A+K I
Sbjct: 1237 SGTKLTDPTE------YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRI 1296

Query: 121  LKYLRRTRDY-MLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQG 180
            L+YL  T ++ + +     L L  Y+D+D+  D+D   ST+G +  L    + W S KQ 
Sbjct: 1297 LRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQK 1356

Query: 181  CIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSH 240
             +  S+ EAEY +    + E  W+ + L +L +   +++P  +YCDN GA      P  H
Sbjct: 1357 GVVRSSTEAEYRSVANTSSEMQWICSLLTELGI--RLTRPPVIYCDNVGATYLCANPVFH 1416

Query: 241  KRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMP 299
             R KHI   YH IR  V  G + V  +++   +AD  TKPL+   F+     +G+  +P
Sbjct: 1417 SRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGVTRVP 1464

[Close]

BLAST of Cmc11g0296581 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.7e-30
Identity = 66/133 (49.62%), Postives = 94/133 (70.68%), Query Frame = 0


Query: 72  MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYM 131
           M+++PY SAVG++MY M+ TRPD+  AVG++S++ S+P   HW A+K +L+YL+ T+ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 132 LVYGSKDLI-LTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQGCIADSTMEAEY 191
           L +       L GY+D+D+  D +SR+STSG +F LNGG V WRS KQ  +A S+ E EY
Sbjct: 61  LEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEY 120

Query: 192 VAACEAAKEAVWL 204
           +A  EA +EAVWL
Sbjct: 121 MALSEATQEAVWL 133

[Close]

BLAST of Cmc11g0296581 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 9.1e-170
Identity = 299/301 (99.34%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 1043 MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 1102

Query: 61   QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120
            QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI
Sbjct: 1103 QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 1162

Query: 121  LKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVF LNGGAVVWRSIKQGC
Sbjct: 1163 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1222

Query: 181  IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK
Sbjct: 1223 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1282

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 300
            RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1283 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1342

Query: 301  T 302
            T
Sbjct: 1343 T 1343

[Close]

BLAST of Cmc11g0296581 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 9.1e-170
Identity = 299/301 (99.34%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 1043 MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 1102

Query: 61   QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120
            QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI
Sbjct: 1103 QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 1162

Query: 121  LKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVF LNGGAVVWRSIKQGC
Sbjct: 1163 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1222

Query: 181  IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK
Sbjct: 1223 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1282

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 300
            RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1283 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1342

Query: 301  T 302
            T
Sbjct: 1343 T 1343

[Close]

BLAST of Cmc11g0296581 vs. ExPASy TrEMBL
Match: A0A5D3BHG7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold639G00150 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 9.1e-170
Identity = 299/301 (99.34%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 828  MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 887

Query: 61   QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120
            QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI
Sbjct: 888  QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 947

Query: 121  LKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVF LNGGAVVWRSIKQGC
Sbjct: 948  LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1007

Query: 181  IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK
Sbjct: 1008 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1067

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 300
            RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1068 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1127

Query: 301  T 302
            T
Sbjct: 1128 T 1128

[Close]

BLAST of Cmc11g0296581 vs. ExPASy TrEMBL
Match: A0A5A7TZD7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001300 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 9.1e-170
Identity = 299/301 (99.34%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 1042 MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 1101

Query: 61   QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120
            QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI
Sbjct: 1102 QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 1161

Query: 121  LKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVF LNGGAVVWRSIKQGC
Sbjct: 1162 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1221

Query: 181  IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK
Sbjct: 1222 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1281

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 300
            RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1282 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1341

Query: 301  T 302
            T
Sbjct: 1342 T 1342

[Close]

BLAST of Cmc11g0296581 vs. ExPASy TrEMBL
Match: A0A5A7SNP8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002160 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 9.1e-170
Identity = 299/301 (99.34%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 902  MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 961

Query: 61   QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120
            QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI
Sbjct: 962  QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 1021

Query: 121  LKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVF LNGGAVVWRSIKQGC
Sbjct: 1022 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1081

Query: 181  IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK
Sbjct: 1082 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1141

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 300
            RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1142 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1201

Query: 301  T 302
            T
Sbjct: 1202 T 1202

[Close]

BLAST of Cmc11g0296581 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 127.5 bits (319), Expect = 1.8e-29
Identity = 83/255 (32.55%), Postives = 134/255 (52.55%), Query Frame = 0


Query: 1   MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
           ++DLG  ++ LG++I R      + + Q  Y   ++ +  +   K   +P    VT S  
Sbjct: 310 LRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 369

Query: 61  QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120
               +  D  + +   Y   +G LMY  + TR DI +AV  +S++   P LAH  AV  I
Sbjct: 370 ----SGGDFVDAK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKI 429

Query: 121 LKYLRRTRDYMLVYGSK-DLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQG 180
           L Y++ T    L Y S+ ++ L  ++D+ FQ+ +D+R+ST+G    L    + W+S KQ 
Sbjct: 430 LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 489

Query: 181 CIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSH 240
            ++ S+ EAEY A   A  E +WL  F  +L++   +SKP  L+CDN+ A+  +     H
Sbjct: 490 VVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFH 549

Query: 241 KRGKHIERKYHLIRE 255
           +R KHIE   H +RE
Sbjct: 550 ERTKHIESDCHSVRE 553

[Close]

BLAST of Cmc11g0296581 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 9.4e-18
Identity = 66/205 (32.20%), Postives = 101/205 (49.27%), Query Frame = 0


Query: 1   MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK--RGLLPFRHGVTLS 60
           MKDLG   + LGIQI        L LSQ  Y ++I+    M + K     LP +   ++S
Sbjct: 33  MKDLGPVHYFLGIQIKTHPSG--LFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVS 92

Query: 61  KEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVK 120
             + P  P D        + S VG+L Y  L TRPDI YAV IV +    P LA +  +K
Sbjct: 93  TAKYP-DPSD--------FRSIVGALQYLTL-TRPDISYAVNIVCQRMHEPTLADFDLLK 152

Query: 121 TILKYLRRTRDY-MLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIK 180
            +L+Y++ T  + + ++ +  L +  + DSD+     +R+ST+G    L    + W + +
Sbjct: 153 RVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKR 212

Query: 181 QGCIADSTMEAEYVAACEAAKEAVW 203
           Q  ++ S+ E EY A    A E  W
Sbjct: 213 QPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc11g0296581 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 45.4 bits (106), Expect = 9.1e-05
Identity = 26/72 (36.11%), Postives = 41/72 (56.94%), Query Frame = 0


Query: 91  TRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYMLVY-GSKDLILTGYTDSDF 150
           TRPD+ +AV  +S++ S    A   AV  +L Y++ T    L Y  + DL L  + DSD+
Sbjct: 6   TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDW 65

Query: 151 QTDRDSRKSTSG 162
            +  D+R+S +G
Sbjct: 66  ASCPDTRRSVTG 77

The following BLAST results are available for this feature:

BLAST of Cmc11g0296581 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97618.1	1.9e-169	99.34	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0048404.1	1.9e-169	99.34	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK19524.1	1.9e-169	99.34	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	1.9e-169	99.34	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]
KAA0026233.1	1.9e-169	99.34	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0296581 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	7.9e-70	46.26	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.6e-44	35.97	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	1.4e-34	32.11	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	2.7e-33	32.44	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P0CV72	4.7e-30	49.62	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Cmc11g0296581 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	9.1e-170	99.34	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	9.1e-170	99.34	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5D3BHG7	9.1e-170	99.34	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold639G0015...	[more]
A0A5A7TZD7	9.1e-170	99.34	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G0013...	[more]
A0A5A7SNP8	9.1e-170	99.34	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00216...	[more]

BLAST of Cmc11g0296581 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.8e-29	32.55	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	9.4e-18	32.20	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	9.1e-05	36.11	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF273	RIBOSOME BIOGENESIS PROTEIN BOP1 HOMOLOG	coord: 155..257
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 155..257
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 142..283 e-value: 2.76677E-68 score: 207.321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0296581.1	Cmc11g0296581.1	mRNA