Cmc11g0296251 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0296251
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 14343045 .. 14344578 (+)
RNA-Seq Expression	Cmc11g0296251
Synteny	Cmc11g0296251

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACAGCGGAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGACAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGTGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACCTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTATGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACTTAAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTATCGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGCTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAGAGGTTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAAAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAAGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTGCGTTTTGAAAAGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCCTATCGCTTGGCGTTGCCTCCATCACTCACGACAGCCCATGATGTGTTTCACGTTTCTATGTTGAGAAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACATGAGCTATACCGAACAGCCCGTTGAGATACTGGCTAGAGAGGTGA

mRNA sequence

ATGAGACAGCGGAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGACAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGTGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACCTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTATGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACTTAAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTATCGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGCTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAGAGGTTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAAAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAAGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTGCGTTTTGAAAAGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCCTATCGCTTGGCGTTGCCTCCATCACTCACGACAGCCCATGATGTGTTTCACGTTTCTATGTTGAGAAACCCGTTGAGATACTGGCTAGAGAGGTGA

Coding sequence (CDS)

ATGAGACAGCGGAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGACAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGTGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACCTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTATGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACTTAAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTATCGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGCTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAGAGGTTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAAAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAAGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTGCGTTTTGAAAAGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCCTATCGCTTGGCGTTGCCTCCATCACTCACGACAGCCCATGATGTGTTTCACGTTTCTATGTTGAGAAACCCGTTGAGATACTGGCTAGAGAGGTGA

Protein sequence

MRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLYVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLTTAHDVFHVSMLRNPLRYWLER

Homology

[Close]

BLAST of Cmc11g0296251 vs. NCBI nr
Match: KAA0060848.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 963.0 bits (2488), Expect = 9.8e-277
Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
           MRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS
Sbjct: 1   MRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60

Query: 61  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120
           VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL
Sbjct: 61  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120

Query: 121 YVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180
           YVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV
Sbjct: 121 YVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180

Query: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240

Query: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
           GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360

Query: 361 VCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420
           VCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK
Sbjct: 361 VCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420

Query: 421 VAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLTTAHDVFHVSMLR 477
           VAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLTTAHDVFHVSMLR
Sbjct: 421 VAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLTTAHDVFHVSMLR 476

[Close]

BLAST of Cmc11g0296251 vs. NCBI nr
Match: KAA0051368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 945.3 bits (2442), Expect = 2.1e-271
Identity = 466/476 (97.90%), Postives = 471/476 (98.95%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
            MRQRRWLELVKDYDCEILYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS
Sbjct: 897  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 956

Query: 61   VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120
            VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL
Sbjct: 957  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 1016

Query: 121  YVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180
             VPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV
Sbjct: 1017 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 1076

Query: 181  KAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1077 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1136

Query: 241  TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
            TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 1137 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 1196

Query: 301  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
            GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSP
Sbjct: 1197 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSP 1256

Query: 361  VCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420
            VCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLK
Sbjct: 1257 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLK 1316

Query: 421  VAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLTTAHDVFHVSMLR 477
            VAPM+GVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSL+T HDVFHVSMLR
Sbjct: 1317 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 1372

[Close]

BLAST of Cmc11g0296251 vs. NCBI nr
Match: KAA0043669.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 940.6 bits (2430), Expect = 5.2e-270
Identity = 463/476 (97.27%), Postives = 469/476 (98.53%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
           MRQRRWLELVKDYDCEILYHP KANVVADALSRKVSHSAALITRQAPLHRD+ERAEI VS
Sbjct: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDIERAEIVVS 60

Query: 61  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120
           VGAVT QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL
Sbjct: 61  VGAVTTQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120

Query: 121 YVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180
            VPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV
Sbjct: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180

Query: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240

Query: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
           GQTERLNQVLEDMLRACALEFP SWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSP
Sbjct: 301 GQTERLNQVLEDMLRACALEFPDSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSP 360

Query: 361 VCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420
           VCWDEVGEQRLMGPELVQSTNEA+QKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK
Sbjct: 361 VCWDEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420

Query: 421 VAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLTTAHDVFHVSMLR 477
           VAPM+GVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSL+T HDVFHVSMLR
Sbjct: 421 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 476

[Close]

BLAST of Cmc11g0296251 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 935.6 bits (2417), Expect = 1.7e-268
Identity = 460/476 (96.64%), Postives = 467/476 (98.11%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
           MRQRRWLELVKDYDCEILYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS
Sbjct: 468 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 527

Query: 61  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120
           VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRL
Sbjct: 528 VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 587

Query: 121 YVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180
            VPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQV
Sbjct: 588 CVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQV 647

Query: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 648 KAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 707

Query: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 708 TYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 767

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
           GQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP
Sbjct: 768 GQTERLNKVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYDKCCRSP 827

Query: 361 VCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420
           +CW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK
Sbjct: 828 ICWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 887

Query: 421 VAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLTTAHDVFHVSMLR 477
           VAPMRGV+RFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSL+T HDVFHVSMLR
Sbjct: 888 VAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 943

[Close]

BLAST of Cmc11g0296251 vs. NCBI nr
Match: KAA0047043.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 932.9 bits (2410), Expect = 1.1e-267
Identity = 461/476 (96.85%), Postives = 465/476 (97.69%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
           MRQRRWLELVKDYDCEILYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEI VS
Sbjct: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVS 60

Query: 61  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120
           VGAVT+QLA LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRL
Sbjct: 61  VGAVTIQLAHLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 120

Query: 121 YVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180
            VPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQV
Sbjct: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180

Query: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240

Query: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
           GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360

Query: 361 VCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420
           VCW EVGEQRLMGPELVQS NEAIQKIRSRMHTAQSRQKSYADVRR DLEFEVGDKVFLK
Sbjct: 361 VCWGEVGEQRLMGPELVQSINEAIQKIRSRMHTAQSRQKSYADVRRIDLEFEVGDKVFLK 420

Query: 421 VAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLTTAHDVFHVSMLR 477
           VAPMRGVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSL+T HDVFHVSMLR
Sbjct: 421 VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 476

[Close]

BLAST of Cmc11g0296251 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.8e-62
Identity = 148/479 (30.90%), Postives = 243/479 (50.73%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSV 61
            R  RW   ++D++ EI Y P  AN +ADALSR       ++    P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR-- 121
                  + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LYVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQ 181
            + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGK 241
             K+   KP G LQP+   E  WE++SMDFI  LP +  G+  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 301
             + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCR 361
            DGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1159

Query: 362  SPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV 421
            SP+      ++     E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Sbjct: 1160 SPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1219

Query: 422  FLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLT-TAHDVFHVSML 476
             +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+       FHVS L
Sbjct: 1220 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1254

[Close]

BLAST of Cmc11g0296251 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.8e-62
Identity = 148/479 (30.90%), Postives = 243/479 (50.73%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSV 61
            R  RW   ++D++ EI Y P  AN +ADALSR       ++    P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR-- 121
                  + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LYVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQ 181
            + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGK 241
             K+   KP G LQP+   E  WE++SMDFI  LP +  G+  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 301
             + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCR 361
            DGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1159

Query: 362  SPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV 421
            SP+      ++     E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Sbjct: 1160 SPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1219

Query: 422  FLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLT-TAHDVFHVSML 476
             +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+       FHVS L
Sbjct: 1220 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1254

[Close]

BLAST of Cmc11g0296251 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.8e-62
Identity = 148/479 (30.90%), Postives = 243/479 (50.73%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSV 61
            R  RW   ++D++ EI Y P  AN +ADALSR       ++    P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR-- 121
                  + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LYVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQ 181
            + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGK 241
             K+   KP G LQP+   E  WE++SMDFI  LP +  G+  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 301
             + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCR 361
            DGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1159

Query: 362  SPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV 421
            SP+      ++     E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Sbjct: 1160 SPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1219

Query: 422  FLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLT-TAHDVFHVSML 476
             +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+       FHVS L
Sbjct: 1220 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1254

[Close]

BLAST of Cmc11g0296251 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.8e-62
Identity = 148/479 (30.90%), Postives = 243/479 (50.73%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSV 61
            R  RW   ++D++ EI Y P  AN +ADALSR       ++    P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR-- 121
                  + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LYVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQ 181
            + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGK 241
             K+   KP G LQP+   E  WE++SMDFI  LP +  G+  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 301
             + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCR 361
            DGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1159

Query: 362  SPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV 421
            SP+      ++     E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Sbjct: 1160 SPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1219

Query: 422  FLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLT-TAHDVFHVSML 476
             +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+       FHVS L
Sbjct: 1220 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1254

[Close]

BLAST of Cmc11g0296251 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.8e-62
Identity = 148/479 (30.90%), Postives = 243/479 (50.73%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSV 61
            R  RW   ++D++ EI Y P  AN +ADALSR       ++    P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR-- 121
                  + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LYVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQ 181
            + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGK 241
             K+   KP G LQP+   E  WE++SMDFI  LP +  G+  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 301
             + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCR 361
            DGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1159

Query: 362  SPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV 421
            SP+      ++     E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Sbjct: 1160 SPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1219

Query: 422  FLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLT-TAHDVFHVSML 476
             +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+       FHVS L
Sbjct: 1220 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1254

[Close]

BLAST of Cmc11g0296251 vs. ExPASy TrEMBL
Match: A0A5A7UZZ4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00810 PE=4 SV=1)

HSP 1 Score: 963.0 bits (2488), Expect = 4.7e-277
Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
           MRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS
Sbjct: 1   MRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60

Query: 61  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120
           VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL
Sbjct: 61  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120

Query: 121 YVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180
           YVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV
Sbjct: 121 YVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180

Query: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240

Query: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
           GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360

Query: 361 VCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420
           VCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK
Sbjct: 361 VCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420

Query: 421 VAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLTTAHDVFHVSMLR 477
           VAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLTTAHDVFHVSMLR
Sbjct: 421 VAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLTTAHDVFHVSMLR 476

[Close]

BLAST of Cmc11g0296251 vs. ExPASy TrEMBL
Match: A0A5A7U7V9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00950 PE=4 SV=1)

HSP 1 Score: 945.3 bits (2442), Expect = 1.0e-271
Identity = 466/476 (97.90%), Postives = 471/476 (98.95%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
            MRQRRWLELVKDYDCEILYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS
Sbjct: 897  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 956

Query: 61   VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120
            VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL
Sbjct: 957  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 1016

Query: 121  YVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180
             VPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV
Sbjct: 1017 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 1076

Query: 181  KAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1077 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1136

Query: 241  TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
            TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 1137 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 1196

Query: 301  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
            GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSP
Sbjct: 1197 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSP 1256

Query: 361  VCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420
            VCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLK
Sbjct: 1257 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLK 1316

Query: 421  VAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLTTAHDVFHVSMLR 477
            VAPM+GVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSL+T HDVFHVSMLR
Sbjct: 1317 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 1372

[Close]

BLAST of Cmc11g0296251 vs. ExPASy TrEMBL
Match: A0A5A7TR61 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19461G00010 PE=4 SV=1)

HSP 1 Score: 940.6 bits (2430), Expect = 2.5e-270
Identity = 463/476 (97.27%), Postives = 469/476 (98.53%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
           MRQRRWLELVKDYDCEILYHP KANVVADALSRKVSHSAALITRQAPLHRD+ERAEI VS
Sbjct: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDIERAEIVVS 60

Query: 61  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120
           VGAVT QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL
Sbjct: 61  VGAVTTQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120

Query: 121 YVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180
            VPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV
Sbjct: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180

Query: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240

Query: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
           GQTERLNQVLEDMLRACALEFP SWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSP
Sbjct: 301 GQTERLNQVLEDMLRACALEFPDSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSP 360

Query: 361 VCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420
           VCWDEVGEQRLMGPELVQSTNEA+QKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK
Sbjct: 361 VCWDEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420

Query: 421 VAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLTTAHDVFHVSMLR 477
           VAPM+GVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSL+T HDVFHVSMLR
Sbjct: 421 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 476

[Close]

BLAST of Cmc11g0296251 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 935.6 bits (2417), Expect = 8.1e-269
Identity = 460/476 (96.64%), Postives = 467/476 (98.11%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
           MRQRRWLELVKDYDCEILYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS
Sbjct: 468 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 527

Query: 61  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120
           VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRL
Sbjct: 528 VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 587

Query: 121 YVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180
            VPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQV
Sbjct: 588 CVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQV 647

Query: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 648 KAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 707

Query: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 708 TYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 767

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
           GQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP
Sbjct: 768 GQTERLNKVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYDKCCRSP 827

Query: 361 VCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420
           +CW EVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK
Sbjct: 828 ICWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 887

Query: 421 VAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLTTAHDVFHVSMLR 477
           VAPMRGV+RFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSL+T HDVFHVSMLR
Sbjct: 888 VAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 943

[Close]

BLAST of Cmc11g0296251 vs. ExPASy TrEMBL
Match: A0A5A7TU00 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00280 PE=4 SV=1)

HSP 1 Score: 932.9 bits (2410), Expect = 5.2e-268
Identity = 461/476 (96.85%), Postives = 465/476 (97.69%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 60
           MRQRRWLELVKDYDCEILYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEI VS
Sbjct: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVS 60

Query: 61  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120
           VGAVT+QLA LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRL
Sbjct: 61  VGAVTIQLAHLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 120

Query: 121 YVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180
            VPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQV
Sbjct: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180

Query: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240

Query: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
           GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360

Query: 361 VCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420
           VCW EVGEQRLMGPELVQS NEAIQKIRSRMHTAQSRQKSYADVRR DLEFEVGDKVFLK
Sbjct: 361 VCWGEVGEQRLMGPELVQSINEAIQKIRSRMHTAQSRQKSYADVRRIDLEFEVGDKVFLK 420

Query: 421 VAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLTTAHDVFHVSMLR 477
           VAPMRGVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSL+T HDVFHVSMLR
Sbjct: 421 VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLR 476

The following BLAST results are available for this feature:

BLAST of Cmc11g0296251 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060848.1	9.8e-277	100.00	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051368.1	2.1e-271	97.90	pol protein [Cucumis melo var. makuwa]	[more]
KAA0043669.1	5.2e-270	97.27	pol protein [Cucumis melo var. makuwa]	[more]
KAA0057672.1	1.7e-268	96.64	pol protein [Cucumis melo var. makuwa]	[more]
KAA0047043.1	1.1e-267	96.85	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0296251 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	9.8e-62	30.90	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	9.8e-62	30.90	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	9.8e-62	30.90	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	9.8e-62	30.90	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	9.8e-62	30.90	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0296251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZZ4	4.7e-277	100.00	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00810 PE...	[more]
A0A5A7U7V9	1.0e-271	97.90	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7TR61	2.5e-270	97.27	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19461G00010 ...	[more]
A0A5A7UP94	8.1e-269	96.64	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]
A0A5A7TU00	5.2e-268	96.85	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00280 PE...	[more]

BLAST of Cmc11g0296251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 91..181 e-value: 1.0E-17 score: 66.1
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 119..351
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 126..182 e-value: 1.9E-17 score: 63.0
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 190..398 e-value: 1.4E-46 score: 160.3
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 193..356 score: 18.902935
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 194..353

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0296251.1	Cmc11g0296251.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding