Cmc11g0295861 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0295861
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 13617500 .. 13618818 (+)
RNA-Seq Expression	Cmc11g0295861
Synteny	Cmc11g0295861

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGCCAGCAAACTGCTCAGTCAGGGTACTTGGAGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGTTGATGTATCCCTGTCATCGGAACCAGTGGTAAGGGACTATTTGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGATTGAGTTTGCCATAGAGCTGGAGCCAGGCACGGTTCCTATATCCAGAGCCCCATACAGAATGGCCCCGGCAGAATTGAAAGAGCTAAAAGTGCAGTTACAAGAGTTGCTTGATAAAGGCTTCATTCGACCGAGTGTGTCACCTTTGGGTGCGCCAGTTCTATTTGTTAAGAAGAAGGATGGATCGATGCGCCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAAATATCCCTTGCCCAGGATCGACGACCTGTTTGACCAGTTACAAGGAGCTACAGTGTTCTCTAAGATTAATCTTCAGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCCTTTCGTTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATCTTGATATATTCCAAGACAGAGGCCGAGCATGAGGAGCATTTACGTATGGTTCTGCAAACCCTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAGGTGTCCTTTGTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGGCCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATTGACGGTTTGTTGAGAACTTTTCCCGTATAGCTACTCTTTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTGCATCGATTCTTACTGTACCTGATGGTTCAGGTAGTTTTGTGATTTACAGTGATGCTTCTAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAATTGAAGAGTCATGAGCAGAATTACCCTACACACGATTTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGTAG

mRNA sequence

ATGAGGGCCAGCAAACTGCTCAGTCAGGGTACTTGGAGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGTTGATGTATCCCTGTCATCGGAACCAGTGGTAAGGGACTATTTGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGATTGAGTTTGCCATAGAGCTGGAGCCAGGCACGGTTCCTATATCCAGAGCCCCATACAGAATGGCCCCGGCAGAATTGAAAGAGCTAAAAGTGCAGTTACAAGAGTTGCTTGATAAAGGCTTCATTCGACCGAGTGTGTCACCTTTGGGTGCGCCAGTTCTATTTGTTAAGAAGAAGGATGGATCGATGCGCCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAAATATCCCTTGCCCAGGATCGACGACCTGTTTGACCAGTTACAAGGAGCTACAGTGTTCTCTAAGATTAATCTTCAGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCCTTTCGTTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATCTTGATATATTCCAAGACAGAGGCCGAGCATGAGGAGCATTTACGTATGGTTCTGCAAACCCTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAGGTGTCCTTTGTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGGCCCGACCTTCCACAGTCAGTGAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTGCATCGATTCTTACTGTACCTGATGGTTCAGGTAGTTTTGTGATTTACAGTGATGCTTCTAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAATTGAAGAGTCATGAGCAGAATTACCCTACACACGATTTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGTAG

Coding sequence (CDS)

ATGAGGGCCAGCAAACTGCTCAGTCAGGGTACTTGGAGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGTTGATGTATCCCTGTCATCGGAACCAGTGGTAAGGGACTATTTGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGATTGAGTTTGCCATAGAGCTGGAGCCAGGCACGGTTCCTATATCCAGAGCCCCATACAGAATGGCCCCGGCAGAATTGAAAGAGCTAAAAGTGCAGTTACAAGAGTTGCTTGATAAAGGCTTCATTCGACCGAGTGTGTCACCTTTGGGTGCGCCAGTTCTATTTGTTAAGAAGAAGGATGGATCGATGCGCCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAAATATCCCTTGCCCAGGATCGACGACCTGTTTGACCAGTTACAAGGAGCTACAGTGTTCTCTAAGATTAATCTTCAGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCCTTTCGTTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATCTTGATATATTCCAAGACAGAGGCCGAGCATGAGGAGCATTTACGTATGGTTCTGCAAACCCTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAGGTGTCCTTTGTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGGCCCGACCTTCCACAGTCAGTGAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTGCATCGATTCTTACTGTACCTGATGGTTCAGGTAGTTTTGTGATTTACAGTGATGCTTCTAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAATTGAAGAGTCATGAGCAGAATTACCCTACACACGATTTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGTAG

Protein sequence

MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSELTRKGAPFVWSKACEDSFQNLKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ

Homology

[Close]

BLAST of Cmc11g0295861 vs. NCBI nr
Match: TYK11938.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 788.1 bits (2034), Expect = 3.7e-224
Identity = 398/407 (97.79%), Postives = 399/407 (98.03%), Query Frame = 0


Query: 1   MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIEL 60
           MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIEL
Sbjct: 271 MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIEL 330

Query: 61  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMRLCI 120
           EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMRLCI
Sbjct: 331 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMRLCI 390

Query: 121 DYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRY 180
           DYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRY
Sbjct: 391 DYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRY 450

Query: 181 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
           GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL
Sbjct: 451 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 510

Query: 241 QTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSELTRKG 300
           QTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSELTRKG
Sbjct: 511 QTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSELTRKG 570

Query: 301 APFVWSKACEDSFQNLKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 360
           APFVWSKACEDSFQNLKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Sbjct: 571 APFVWSKACEDSFQNLKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 630

Query: 361 SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLK 408
           SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG K  +  D  S K
Sbjct: 631 SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG-KANVVADALSRK 676

[Close]

BLAST of Cmc11g0295861 vs. NCBI nr
Match: KAA0059069.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 787.7 bits (2033), Expect = 4.8e-224
Identity = 391/412 (94.90%), Postives = 401/412 (97.33%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIEL 60
            +RASKLLSQGTW ILASVVDTREVDVSLSSEPVVRDY DVFPEELPGLPPHRE+EF IEL
Sbjct: 752  IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFGIEL 811

Query: 61   EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMRLCI 120
            EPGTVPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSP GAPVLFVKKKDGSMRLCI
Sbjct: 812  EPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 871

Query: 121  DYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRY 180
            DYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKI+L+SGYHQLRIKDGDVPKT FRSRY
Sbjct: 872  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRY 931

Query: 181  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
            GHYEFIVMSFGLTNAPAVFMDLMNRVFREFL TFVIVFIDDILIYSKTEAEHEEHLR+VL
Sbjct: 932  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLYTFVIVFIDDILIYSKTEAEHEEHLRIVL 991

Query: 241  QTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSELTRKG 300
            QTLRDNKLYAKFSKCEFWLKQVSF+GHVVSKAGVSVDPA IEAVT+W RPSTVSELTRKG
Sbjct: 992  QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAMIEAVTAWTRPSTVSELTRKG 1051

Query: 301  APFVWSKACEDSFQNLKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 360
            APFVWSKACEDSFQNLK KLVTA +LTVPDGSGSFVIYSDASKKGLGCVLMQQ KVVAYA
Sbjct: 1052 APFVWSKACEDSFQNLKHKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQSKVVAYA 1111

Query: 361  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ 413
            SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ
Sbjct: 1112 SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ 1163

[Close]

BLAST of Cmc11g0295861 vs. NCBI nr
Match: KAA0047209.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 786.6 bits (2030), Expect = 1.1e-223
Identity = 391/412 (94.90%), Postives = 402/412 (97.57%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIEL 60
            +RASKLLSQGTW ILASVVDTREVD+SLSSEPVVRDY DVFPEELPGLPPHRE+EFAIEL
Sbjct: 1048 IRASKLLSQGTWGILASVVDTREVDISLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 1107

Query: 61   EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMRLCI 120
            E GTVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVSP GAPVLFVKKKDGSMRLCI
Sbjct: 1108 ELGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKDGSMRLCI 1167

Query: 121  DYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRY 180
            DYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKI+L+SGYHQLRIKDGDVPKTAF SRY
Sbjct: 1168 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFCSRY 1227

Query: 181  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
            GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKT+AEHE+HLR+VL
Sbjct: 1228 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTKAEHEKHLRIVL 1287

Query: 241  QTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSELTRKG 300
            QTLRDNKLYAKFSKCEFWLKQVSF+GHVVSKAGVSVDPAKIE VT W RPSTVSELTRKG
Sbjct: 1288 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEVVTGWTRPSTVSELTRKG 1347

Query: 301  APFVWSKACEDSFQNLKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 360
            APFVWSKACEDSFQNLKQKLVTA +LTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Sbjct: 1348 APFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 1407

Query: 361  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ 413
            SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ
Sbjct: 1408 SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ 1459

[Close]

BLAST of Cmc11g0295861 vs. NCBI nr
Match: KAA0031931.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 785.4 bits (2027), Expect = 2.4e-223
Identity = 397/439 (90.43%), Postives = 406/439 (92.48%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIEL 60
            +RASKLLSQGTW ILASVVDTREVDVSLSSEPVVRDY DVFPEELPGLPPHRE+EFAIEL
Sbjct: 879  IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 938

Query: 61   EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMRLCI 120
            EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SP GAPVLFVKKKDGSMRLCI
Sbjct: 939  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSMSPWGAPVLFVKKKDGSMRLCI 998

Query: 121  DYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRY 180
            DYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKI+L+SGYHQLRIKDGDVPKTAFRSRY
Sbjct: 999  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRY 1058

Query: 181  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
            GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VL
Sbjct: 1059 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVL 1118

Query: 241  QTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSE----- 300
            QTLRDNKLYAKFSKCEFWLKQVSF+GHVVSKAGVSVDPAKIEAVT W RPSTVSE     
Sbjct: 1119 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 1178

Query: 301  ----------------------LTRKGAPFVWSKACEDSFQNLKQKLVTASILTVPDGSG 360
                                  LTRKGAPFVWSKACEDSFQNLKQKLVTA +LTVPDGSG
Sbjct: 1179 GLAGYYRRFVENFSRIAAPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSG 1238

Query: 361  SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 413
            SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 1239 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 1298

[Close]

BLAST of Cmc11g0295861 vs. NCBI nr
Match: KAA0035602.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 785.4 bits (2027), Expect = 2.4e-223
Identity = 390/412 (94.66%), Postives = 400/412 (97.09%), Query Frame = 0


Query: 1   MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIEL 60
           +RASKLLSQGTW ILASVVDTREVDVSLSSEPVVRDY DVFPEELPGLP HRE+EFAIEL
Sbjct: 304 IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPSHREVEFAIEL 363

Query: 61  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMRLCI 120
           EPGT+PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSP GAPVLFVKKKDGSM LCI
Sbjct: 364 EPGTIPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCI 423

Query: 121 DYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRY 180
           DYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKI+L+SGY QLRIKDGDVPK  FRSRY
Sbjct: 424 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYQQLRIKDGDVPKITFRSRY 483

Query: 181 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
           GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTEAEHEEHLR+VL
Sbjct: 484 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEHLRIVL 543

Query: 241 QTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSELTRKG 300
           QTLRDNKLYAKFSKCEFWLKQVSF+GHVVSKAGVSVDPAKIEAVT W RPSTVSELTRKG
Sbjct: 544 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSELTRKG 603

Query: 301 APFVWSKACEDSFQNLKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 360
           APFVWSKACEDSFQNLKQKLVTA +LTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Sbjct: 604 APFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 663

Query: 361 SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ 413
           SRQLKSHEQNYPT DLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ
Sbjct: 664 SRQLKSHEQNYPTDDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ 715

[Close]

BLAST of Cmc11g0295861 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 7.5e-63
Identity = 131/376 (34.84%), Postives = 210/376 (55.85%), Query Frame = 0


Query: 66  PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKD-----GSMRLCI 125
           PI    Y +A     E++ Q+QE+L++G IR S SP  +P   V KK         R+ I
Sbjct: 206 PIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVI 265

Query: 126 DYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRY 185
           DYR+LN++T+ ++YP+P +D++  +L     F+ I+L  G+HQ+ + +  + KTAF ++ 
Sbjct: 266 DYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKS 325

Query: 186 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 245
           GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI+I+S +  EH   +++V 
Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVF 385

Query: 246 QTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSELT--- 305
             L D  L  +  KCEF  K+ +F+GH+V+  G+  +P K++A+ S+  P+   E+    
Sbjct: 386 TKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFL 445

Query: 306 ------RKGAP-----------------FVWSKACE--DSFQNLKQKLVTASILTVPDGS 365
                 RK  P                  + ++  E  ++F+ LK  ++   IL +PD  
Sbjct: 446 GLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFE 505

Query: 366 GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL 409
             FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL
Sbjct: 506 KKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYL 565

[Close]

BLAST of Cmc11g0295861 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.4e-61
Identity = 132/398 (33.17%), Postives = 219/398 (55.03%), Query Frame = 0


Query: 43  EELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPL 102
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 103 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYH 162
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K++L+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 163 QLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 222
            +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 223 LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIE 282
           LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 283 AVTSWARPST---------------------------VSELTRKGAPFVWSKACEDSFQN 342
            V  W +P                             ++ L +K   + W+     + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 343 LKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 402
           +KQ LV+  +L   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 403 YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSL 407
           Y   D E+ A++ +LK WRHYL    E  +I TDH++L
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

[Close]

BLAST of Cmc11g0295861 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.4e-61
Identity = 132/398 (33.17%), Postives = 219/398 (55.03%), Query Frame = 0


Query: 43  EELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPL 102
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 103 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYH 162
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K++L+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 163 QLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 222
            +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 223 LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIE 282
           LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 283 AVTSWARPST---------------------------VSELTRKGAPFVWSKACEDSFQN 342
            V  W +P                             ++ L +K   + W+     + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 343 LKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 402
           +KQ LV+  +L   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 403 YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSL 407
           Y   D E+ A++ +LK WRHYL    E  +I TDH++L
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

[Close]

BLAST of Cmc11g0295861 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.4e-61
Identity = 132/398 (33.17%), Postives = 219/398 (55.03%), Query Frame = 0


Query: 43  EELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPL 102
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 103 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYH 162
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K++L+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 163 QLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 222
            +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 223 LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIE 282
           LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 283 AVTSWARPST---------------------------VSELTRKGAPFVWSKACEDSFQN 342
            V  W +P                             ++ L +K   + W+     + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 343 LKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 402
           +KQ LV+  +L   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 403 YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSL 407
           Y   D E+ A++ +LK WRHYL    E  +I TDH++L
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

[Close]

BLAST of Cmc11g0295861 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.4e-61
Identity = 132/398 (33.17%), Postives = 219/398 (55.03%), Query Frame = 0


Query: 43  EELPGLPPHREIEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPL 102
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 103 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYH 162
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K++L+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 163 QLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 222
            +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 223 LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIE 282
           LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 283 AVTSWARPST---------------------------VSELTRKGAPFVWSKACEDSFQN 342
            V  W +P                             ++ L +K   + W+     + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 343 LKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 402
           +KQ LV+  +L   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 403 YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSL 407
           Y   D E+ A++ +LK WRHYL    E  +I TDH++L
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

[Close]

BLAST of Cmc11g0295861 vs. ExPASy TrEMBL
Match: A0A5D3CLB5 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001180 PE=4 SV=1)

HSP 1 Score: 788.1 bits (2034), Expect = 1.8e-224
Identity = 398/407 (97.79%), Postives = 399/407 (98.03%), Query Frame = 0


Query: 1   MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIEL 60
           MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIEL
Sbjct: 271 MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIEL 330

Query: 61  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMRLCI 120
           EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMRLCI
Sbjct: 331 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMRLCI 390

Query: 121 DYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRY 180
           DYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRY
Sbjct: 391 DYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRY 450

Query: 181 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
           GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL
Sbjct: 451 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 510

Query: 241 QTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSELTRKG 300
           QTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSELTRKG
Sbjct: 511 QTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSELTRKG 570

Query: 301 APFVWSKACEDSFQNLKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 360
           APFVWSKACEDSFQNLKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Sbjct: 571 APFVWSKACEDSFQNLKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 630

Query: 361 SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLK 408
           SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG K  +  D  S K
Sbjct: 631 SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG-KANVVADALSRK 676

[Close]

BLAST of Cmc11g0295861 vs. ExPASy TrEMBL
Match: A0A5A7UZV8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1186G00110 PE=4 SV=1)

HSP 1 Score: 787.7 bits (2033), Expect = 2.3e-224
Identity = 391/412 (94.90%), Postives = 401/412 (97.33%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIEL 60
            +RASKLLSQGTW ILASVVDTREVDVSLSSEPVVRDY DVFPEELPGLPPHRE+EF IEL
Sbjct: 752  IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFGIEL 811

Query: 61   EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMRLCI 120
            EPGTVPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSP GAPVLFVKKKDGSMRLCI
Sbjct: 812  EPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 871

Query: 121  DYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRY 180
            DYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKI+L+SGYHQLRIKDGDVPKT FRSRY
Sbjct: 872  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRY 931

Query: 181  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
            GHYEFIVMSFGLTNAPAVFMDLMNRVFREFL TFVIVFIDDILIYSKTEAEHEEHLR+VL
Sbjct: 932  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLYTFVIVFIDDILIYSKTEAEHEEHLRIVL 991

Query: 241  QTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSELTRKG 300
            QTLRDNKLYAKFSKCEFWLKQVSF+GHVVSKAGVSVDPA IEAVT+W RPSTVSELTRKG
Sbjct: 992  QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAMIEAVTAWTRPSTVSELTRKG 1051

Query: 301  APFVWSKACEDSFQNLKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 360
            APFVWSKACEDSFQNLK KLVTA +LTVPDGSGSFVIYSDASKKGLGCVLMQQ KVVAYA
Sbjct: 1052 APFVWSKACEDSFQNLKHKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQSKVVAYA 1111

Query: 361  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ 413
            SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ
Sbjct: 1112 SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ 1163

[Close]

BLAST of Cmc11g0295861 vs. ExPASy TrEMBL
Match: A0A5A7U149 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold83G00930 PE=4 SV=1)

HSP 1 Score: 786.6 bits (2030), Expect = 5.2e-224
Identity = 391/412 (94.90%), Postives = 402/412 (97.57%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIEL 60
            +RASKLLSQGTW ILASVVDTREVD+SLSSEPVVRDY DVFPEELPGLPPHRE+EFAIEL
Sbjct: 1048 IRASKLLSQGTWGILASVVDTREVDISLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 1107

Query: 61   EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMRLCI 120
            E GTVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVSP GAPVLFVKKKDGSMRLCI
Sbjct: 1108 ELGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKDGSMRLCI 1167

Query: 121  DYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRY 180
            DYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKI+L+SGYHQLRIKDGDVPKTAF SRY
Sbjct: 1168 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFCSRY 1227

Query: 181  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
            GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKT+AEHE+HLR+VL
Sbjct: 1228 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTKAEHEKHLRIVL 1287

Query: 241  QTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSELTRKG 300
            QTLRDNKLYAKFSKCEFWLKQVSF+GHVVSKAGVSVDPAKIE VT W RPSTVSELTRKG
Sbjct: 1288 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEVVTGWTRPSTVSELTRKG 1347

Query: 301  APFVWSKACEDSFQNLKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 360
            APFVWSKACEDSFQNLKQKLVTA +LTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Sbjct: 1348 APFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 1407

Query: 361  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ 413
            SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ
Sbjct: 1408 SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ 1459

[Close]

BLAST of Cmc11g0295861 vs. ExPASy TrEMBL
Match: A0A5A7SQU8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00040 PE=4 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 1.1e-223
Identity = 397/439 (90.43%), Postives = 406/439 (92.48%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIEL 60
            +RASKLLSQGTW ILASVVDTREVDVSLSSEPVVRDY DVFPEELPGLPPHRE+EFAIEL
Sbjct: 879  IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 938

Query: 61   EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMRLCI 120
            EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SP GAPVLFVKKKDGSMRLCI
Sbjct: 939  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSMSPWGAPVLFVKKKDGSMRLCI 998

Query: 121  DYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRY 180
            DYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKI+L+SGYHQLRIKDGDVPKTAFRSRY
Sbjct: 999  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRY 1058

Query: 181  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
            GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VL
Sbjct: 1059 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVL 1118

Query: 241  QTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSE----- 300
            QTLRDNKLYAKFSKCEFWLKQVSF+GHVVSKAGVSVDPAKIEAVT W RPSTVSE     
Sbjct: 1119 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 1178

Query: 301  ----------------------LTRKGAPFVWSKACEDSFQNLKQKLVTASILTVPDGSG 360
                                  LTRKGAPFVWSKACEDSFQNLKQKLVTA +LTVPDGSG
Sbjct: 1179 GLAGYYRRFVENFSRIAAPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSG 1238

Query: 361  SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 413
            SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 1239 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 1298

[Close]

BLAST of Cmc11g0295861 vs. ExPASy TrEMBL
Match: A0A5A7SWF6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G002790 PE=4 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 1.1e-223
Identity = 390/412 (94.66%), Postives = 400/412 (97.09%), Query Frame = 0


Query: 1   MRASKLLSQGTWSILASVVDTREVDVSLSSEPVVRDYLDVFPEELPGLPPHREIEFAIEL 60
           +RASKLLSQGTW ILASVVDTREVDVSLSSEPVVRDY DVFPEELPGLP HRE+EFAIEL
Sbjct: 304 IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPSHREVEFAIEL 363

Query: 61  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMRLCI 120
           EPGT+PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSP GAPVLFVKKKDGSM LCI
Sbjct: 364 EPGTIPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCI 423

Query: 121 DYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKINLQSGYHQLRIKDGDVPKTAFRSRY 180
           DYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKI+L+SGY QLRIKDGDVPK  FRSRY
Sbjct: 424 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYQQLRIKDGDVPKITFRSRY 483

Query: 181 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
           GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTEAEHEEHLR+VL
Sbjct: 484 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEHLRIVL 543

Query: 241 QTLRDNKLYAKFSKCEFWLKQVSFVGHVVSKAGVSVDPAKIEAVTSWARPSTVSELTRKG 300
           QTLRDNKLYAKFSKCEFWLKQVSF+GHVVSKAGVSVDPAKIEAVT W RPSTVSELTRKG
Sbjct: 544 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSELTRKG 603

Query: 301 APFVWSKACEDSFQNLKQKLVTASILTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 360
           APFVWSKACEDSFQNLKQKLVTA +LTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Sbjct: 604 APFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 663

Query: 361 SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ 413
           SRQLKSHEQNYPT DLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ
Sbjct: 664 SRQLKSHEQNYPTDDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQ 715

[Close]

BLAST of Cmc11g0295861 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 2.2e-09
Identity = 39/130 (30.00%), Postives = 57/130 (43.85%), Query Frame = 0


Query: 235 HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFVG--HVVSKAGVSVDPAKIEAVTSWARPST 294
           HL MVLQ    ++ YA   KC F   Q++++G  H++S  GVS DPAK+EA+  W  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 295 VSEL--------------------------TRKGAPFVWSKACEDSFQNLKQKLVTASIL 337
            +EL                            K     W++    +F+ LK  + T  +L
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVL 122

The following BLAST results are available for this feature:

BLAST of Cmc11g0295861 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11938.1	3.7e-224	97.79	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0059069.1	4.8e-224	94.90	pol protein [Cucumis melo var. makuwa]	[more]
KAA0047209.1	1.1e-223	94.90	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0031931.1	2.4e-223	90.43	pol protein [Cucumis melo var. makuwa]	[more]
KAA0035602.1	2.4e-223	94.66	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0295861 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	7.5e-63	34.84	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P0CT41	1.4e-61	33.17	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.4e-61	33.17	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.4e-61	33.17	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.4e-61	33.17	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0295861 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLB5	1.8e-224	97.79	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7UZV8	2.3e-224	94.90	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11...	[more]
A0A5A7U149	5.2e-224	94.90	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold83...	[more]
A0A5A7SQU8	1.1e-223	90.43	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7SWF6	1.1e-223	94.66	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold28...	[more]

BLAST of Cmc11g0295861 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.2e-09	30.00	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.370		coord: 330..400 e-value: 5.9E-9 score: 37.8
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 54..194 e-value: 1.4E-91 score: 307.6
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 300..409 coord: 66..296
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 300..409 coord: 66..296
None	No IPR available	CDD	cd01647	RT_LTR	coord: 93..269 e-value: 1.46032E-94 score: 279.48
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 336..412 e-value: 1.88244E-37 score: 130.305
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 109..268 e-value: 6.0E-27 score: 94.6
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 90..269 score: 10.023561
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 134..269 e-value: 1.4E-91 score: 307.6
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 305..399 e-value: 1.4E-31 score: 108.4
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 33..412

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0295861.1	Cmc11g0295861.1	mRNA