Cmc11g0295761 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0295761
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	DUF4219 domain-containing protein/UBN2 domain-containing protein
Location	CMiso1.1chr11: 13356759 .. 13357720 (+)
RNA-Seq Expression	Cmc11g0295761
Synteny	Cmc11g0295761

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTAGGATCAAGTTAATTGGAGAATTTTACTGTCAACTAGGGAGTACCTTTGTTTGGCTAAAATCTTCAGGTAAGAGATTCTCCTACTAGACCTTCGAACTGAATTCAAGAGACCGCATGTAATTATGATTATGCATTGATGGTAGCTAAAATGCATAATTTGATGATAATGATTATACTGAGATTATGATGATAGTTGATGTTGATGATGATGACTGAGATTATTATGTTGATGATTGATGATGATGACTGATGTTATGTTAATGACCGGTAGTATGTTGTTGATGACTGTTGATGATTGTTAATGCATGATATATTAATCACATGATTAAGGACGTTAAGATTAATACTCATGCCATGTTATGATGTTATGTTATGCTACATGCTATGGATAGGGTGTTCTGTTAACTTTGTCTATTAGAGTCGTACCTACATGGGTGTCCTTCGGGATCACCACCTATTTAGGACTGAGTGGTCCGACGGGACGCCAGTCTAGCATGGATAAAGATATGATTCGAGTGATTCGACGGGGTTCTCGCATCCCGATTGTCTTAGTGTTACCCCCGGGTTCACTACAGACCAGCATGTCCTAGGTGCTCCCTCGGGACACCGAAGACCAGATTTTCGTTCCTATGGGAGCGCATGTTGCACGTGTTCGGGAACGTGCCAGAGATTGGGTACCATTTTCAGGACTCTAATGGGAAGTTAACAGACACCTAGCGGGACTAGTAGTAGGTCCCTTACTGAGTATATGTTTATACTCACTCTTTCTATGTTTAACATTTCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAAAGAAGGATCCGTGACATGCCATATGGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTGTTAATATTCCGTTTTTAATGAAAATTTATTCTTCCCTCGTTTCAAAAAGTGTCTCTTGTCATTGTTTTTTT

mRNA sequence

ATGATTAGGATCAAGTTAATTGGAGAATTTTACTGTCAACTAGGGAGTACCTTTGTTTGGCTAAAATCTTCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAAAGAAGGATCCGTGACATGCCATATGGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTGTTAATATTCCGTTTTTAATGAAAATTTATTCTTCCCTCGTTTCAAAAAGTGTCTCTTGTCATTGTTTTTTT

Coding sequence (CDS)

ATGATTAGGATCAAGTTAATTGGAGAATTTTACTGTCAACTAGGGAGTACCTTTGTTTGGCTAAAATCTTCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAAAGAAGGATCCGTGACATGCCATATGGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTGTTAA

Protein sequence

MIRIKLIGEFYCQLGSTFVWLKSSGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVC

Homology

[Close]

BLAST of Cmc11g0295761 vs. NCBI nr
Match: TYJ99939.1 (hypothetical protein E5676_scaffold701G00700 [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 8.5e-10
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 25 GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV 58
          GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV
Sbjct: 51 GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV 83

[Close]

BLAST of Cmc11g0295761 vs. NCBI nr
Match: KAA0045385.1 (hypothetical protein E6C27_scaffold442G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 1.1e-09
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0


Query: 16 STFVWLKSSGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV 58
          S  V +   GEGKGRGKLASDKEGSVTCHMGTQFCFRVYV+V
Sbjct: 15 SLIVLVFPPGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVAV 56

[Close]

BLAST of Cmc11g0295761 vs. NCBI nr
Match: KAA0038098.1 (uncharacterized protein E6C27_scaffold36G003180 [Cucumis melo var. makuwa] >TYK20509.1 uncharacterized protein E5676_scaffold237G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 1.4e-09
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 13 QLGSTFVWLKSSGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV 58
          +LG+ +  L  S EGKGRGKLASD+EGSVTCHMGTQFCFRVYVSV
Sbjct: 10 ELGTIYRTLMGS-EGKGRGKLASDREGSVTCHMGTQFCFRVYVSV 53

[Close]

BLAST of Cmc11g0295761 vs. NCBI nr
Match: TYK09576.1 (hypothetical protein E5676_scaffold458G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 1.9e-09
Identity = 36/55 (65.45%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 3  RIKLIGEFYCQLGSTFVWLKSSGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV 58
          R +  G   C    T  +L   GEGKGRGKLA+DKE SVTCHMGTQFCFRVYVSV
Sbjct: 41 RFRSYGSACCTCSGTCQFL---GEGKGRGKLANDKEESVTCHMGTQFCFRVYVSV 92

[Close]

BLAST of Cmc11g0295761 vs. NCBI nr
Match: KAA0063966.1 (hypothetical protein E6C27_scaffold616G001210 [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 1.9e-09
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 25 GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV 58
          GEGKGRGKLASD+EGSVTCHMGTQFCFRVYVSV
Sbjct: 24 GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSV 56

[Close]

BLAST of Cmc11g0295761 vs. ExPASy TrEMBL
Match: A0A5D3BLS1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00700 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.1e-10
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 25 GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV 58
          GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV
Sbjct: 51 GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV 83

[Close]

BLAST of Cmc11g0295761 vs. ExPASy TrEMBL
Match: A0A5A7TVG7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold442G00010 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.4e-10
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0


Query: 16 STFVWLKSSGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV 58
          S  V +   GEGKGRGKLASDKEGSVTCHMGTQFCFRVYV+V
Sbjct: 15 SLIVLVFPPGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVAV 56

[Close]

BLAST of Cmc11g0295761 vs. ExPASy TrEMBL
Match: A0A5D3DAI2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00830 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.0e-10
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 13 QLGSTFVWLKSSGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV 58
          +LG+ +  L  S EGKGRGKLASD+EGSVTCHMGTQFCFRVYVSV
Sbjct: 10 ELGTIYRTLMGS-EGKGRGKLASDREGSVTCHMGTQFCFRVYVSV 53

[Close]

BLAST of Cmc11g0295761 vs. ExPASy TrEMBL
Match: A0A5A7VJ46 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00510 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.1e-10
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 25 GEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV 58
          GEGKGRGKLASD+EGSVTCHMGTQFCFRVYVSV
Sbjct: 61 GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSV 93

[Close]

BLAST of Cmc11g0295761 vs. ExPASy TrEMBL
Match: A0A5D3C0E4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00160 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.1e-10
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0


Query: 16 STFVWLKSSGEGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV 58
          S  V +  SGEGK RGKLASD+EGSVTCHMGTQFCFRVYVSV
Sbjct: 32 SPIVLVFPSGEGKDRGKLASDREGSVTCHMGTQFCFRVYVSV 73

The following BLAST results are available for this feature:

BLAST of Cmc11g0295761 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ99939.1	8.5e-10	100.00	hypothetical protein E5676_scaffold701G00700 [Cucumis melo var. makuwa]	[more]
KAA0045385.1	1.1e-09	80.95	hypothetical protein E6C27_scaffold442G00010 [Cucumis melo var. makuwa]	[more]
KAA0038098.1	1.4e-09	77.78	uncharacterized protein E6C27_scaffold36G003180 [Cucumis melo var. makuwa] >TYK2...	[more]
TYK09576.1	1.9e-09	65.45	hypothetical protein E5676_scaffold458G00020 [Cucumis melo var. makuwa]	[more]
KAA0063966.1	1.9e-09	96.97	hypothetical protein E6C27_scaffold616G001210 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0295761 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0295761 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BLS1	4.1e-10	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TVG7	5.4e-10	80.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DAI2	7.0e-10	77.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VJ46	9.1e-10	96.97	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C0E4	9.1e-10	80.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Cmc11g0295761 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0295761.1	Cmc11g0295761.1	mRNA