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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. GTCAAAAGTGATGCCCTTATTTCCCCCATGCTTGATTGAAAGTGTCGTAGAGAAGGTTTATGATGTTGTGTCAGGAAATATCTTTTCCTGATGCCTAAAGAGGACATCAACGGTGTACTATTGCCGACGTATAGGCGTGACATCAGGGATCATGTTTTTTTGACATTGTATCAACGTTGGCCACAGAGACGACAGGAGAAGTGTATTCTCGACGTCATGCTGGTTGCACGTCGTGAATAGTTCTCCCTACATTCTTCTTGACGTTAGTTTGTACGTCAGAGAAGCCTTCCCCGATGTCGTTTCCAATCTTCGTTGACGCATGACAGCATCGGGAGTCCCCTGACTTGTTGTAGTGACGGTAAGTTTACGGTTAAGAGTGCTTATCATCTAACTTTGAATCTGAGTGAGTCTAAGATGGTCTCCTCTTCGAACCCTCATTTGTTGAAGGATTGGTGGAAAGCTTTGTGGAAGGCTAGGGTACTTCCAAATTAATCAAAATTTACATTTGGAGAATGCTAAAAAATATTATTCCATCAAAATCGGAGGAGACTTTGAGGCATTTATGTGGAATTGCAGGTTTGCTAAAAAAACTTTGCTCATTCTTTTTCCCTCATTTACTTTCATTTCCTTTTTTAGGGGAGAATCTCGTACTCTTGTGGGATTGGATCTGGACAAGTTCAAAGATGAAGAGATTGATATGATTATTCTGATGTGGTGGGAAATTTAGGCCTGCAAGAATTATTGGGTACTAAAACTTGTGTCCTCAACCTATCCATAAGTGTTTCTCAAGCTTGCAAGTTGATTTGTCGATATGTAAATTAAGCTATTTTAGTTTTGTGTTGGTGCATTGGTCCCAAAAATTAAGAATGTATCGAGTCATGAGATTTGACAACCTCCTTCTGTGGGAGGGAAATTAAATTCTGATATTCGTTGAATGAGAAGATTGCTGTTAGAGGATTAGTTGGATTATTCGTGATTCTACTAAATCTTTGATTGACTGGGGATGTTTTCAAATCTGAAGGCTATTGAGAAGAGTTTGAAGTCTTTAAGCTCTTTGTTTGGGTACTCTATTTTTCTTATTTTAGTTGAATCTGAC mRNA sequence GTCAAAAGTGATGCCCTTATTTCCCCCATGCTTGATTGAAAGTGTCGTAGAGAAGGTTTATGATGTTGTGTCAGGAAATATCTTTTCCTGATGCCTAAAGAGGACATCAACGGTGTACTATTGCCGACGTATAGGCGTGACATCAGGGATCATGTTTTTTTGACATTGTATCAACGTTGGCCACAGAGACGACAGGAGAAGTGTATTCTCGACGTCATGCTGGTTGCACGTCGTGAATAGTTCTCCCTACATTCTTCTTGACGTTAGTTTGTACGTCAGAGAAGCCTTCCCCGATGTCGTTTCCAATCTTCGTTGACGCATGACAGCATCGGGAGTCCCCTGACTTGTTGTAGTGACGGGGAGAATCTCGTACTCTTGTGGGATTGGATCTGGACAAGTTCAAAGATGAAGAGATTGATATGATTATTCTGATGTGGTGGGAAATTTAGGCCTGCAAGAATTATTGGGTACTAAAACTTGTGTCCTCAACCTATCCATAAGTGTTTCTCAAGCTTGCAAGTTGATTTGTCGATATGTAAATTAAGCTATTTTAGTTTTGTGTTGGTGCATTGGTCCCAAAAATTAAGAATGTATCGAGTCATGAGATTTGACAACCTCCTTCTGTGGGAGGGAAATTAAATTCTGATATTCGTTGAATGAGAAGATTGCTGTTAGAGGATTAGTTGGATTATTCGTGATTCTACTAAATCTTTGATTGACTGGGGATGTTTTCAAATCTGAAGGCTATTGAGAAGAGTTTGAAGTCTTTAAGCTCTTTGTTTGGGTACTCTATTTTTCTTATTTTAGTTGAATCTGAC Coding sequence (CDS) ATGCCTAAAGAGGACATCAACGGTGTACTATTGCCGACGTATAGGCGTGACATCAGGGATCATGTTTTTTTGACATTGTATCAACGTTGGCCACAGAGACGACAGGAGAAGTGTATTCTCGACGTCATGCTGGTTGCACGTCGTGAATAG Protein sequence MPKEDINGVLLPTYRRDIRDHVFLTLYQRWPQRRQEKCILDVMLVARRE
Homology
BLAST of Cmc11g0295641 vs. NCBI nr
Match: KAA0040670.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 69.3 bits (168), Expect = 1.0e-08 Identity = 34/49 (69.39%), Postives = 36/49 (73.47%), Query Frame = 0
Query: 1 MPKEDINGVLLPTYRRDIRDHVFLTLYQRWPQRRQEKCILDVMLVARRE 50
MPKED L P YRR + DHV TLYQ PQRRQEKCIL V+LVARRE
Sbjct: 274 MPKEDSGNALFPMYRRHVGDHVCSTLYQHRPQRRQEKCILVVVLVARRE 322
BLAST of Cmc11g0295641 vs. ExPASy TrEMBL
Match: A0A5A7TBH6 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold540G00050 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 5.0e-09 Identity = 34/49 (69.39%), Postives = 36/49 (73.47%), Query Frame = 0
Query: 1 MPKEDINGVLLPTYRRDIRDHVFLTLYQRWPQRRQEKCILDVMLVARRE 50
MPKED L P YRR + DHV TLYQ PQRRQEKCIL V+LVARRE
Sbjct: 274 MPKEDSGNALFPMYRRHVGDHVCSTLYQHRPQRRQEKCILVVVLVARRE 322
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0040670.1 | 1.0e-08 | 69.39 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TBH6 | 5.0e-09 | 69.39 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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