Cmc11g0295271 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0295271
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr11: 12552161 .. 12558676 (+)
RNA-Seq Expression	Cmc11g0295271
Synteny	Cmc11g0295271

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTATGCTTATTAGTTATGTTCGCTTTAGCTATATTAATTATTATATGATTTGGATAAGGATGCGTTTAAAATTATATATATGTGTGTGGAGTTGTGCCCCTACATATGAAATCGTAATACATGTACAATTAATCCTCAACTTTTCTTCGGAAGGGAAAATGAAGTCCAAGTATTCTCTGTTTTTATGTCTTCTACTTTTGTCCTTTTTAGTTATCTCATGCACTATACAAATCCACACAACTGAAGATGAGAAACAAGGTATTTGATTTAACACACACCTATTCCTATTTCCTTTCATTTTTTAGCGTTGAAGCTTTGTTAACCTAACTTACGAACACTACAAGAAATTTGGTCTTTAATGTCGGTTTAAAACCGACATTAAAGGCCTTTAATGTCACTTGGCGACCGACATCTTTGCGAGCGTTATTAAAGGTCTTTAATGTCGGTTGGGCTTTGATGTCGGTTTATAACCGACATTCAAGACATCTTTAATGTCAGTTACAAACTGACATTAAAGGCCTTCAATGTCGGTTATAAACCGACATCTTTGAAGGTTTTATTGAAGACCTTTAATGTCGGTTGATCTTTAATGTCGTTTATGAGATATCTTTAATGTCGTTTTTCCACCGACATTAAAGATGTCTTTAATTTTTTTAACCGACATTAAAGATGTCTTTAATGTCGTTTTTAAACCGACATTAAAGACACATTTAATGTCGTATTTACACTAGTTTTTATGATGGCAAAACCAACATTATTTGGCTTGAATTATATATAATAAAATACAATTAAATAAACAACCAACAACTGTAAGTGAAAACTCAAAAATATTAAGATAATATATAAGATCGTGATTAATAACCAATGTATATGTACAACAGAAAGTTCCTCCACTAAATACATATTCATATTTGTGAATGTAGCAACCTCAAATTCAAGGACTAACAATTAAATACAGAACATCATTCACAAAAATGAATAAACATACAAAAGTACTCATCAAGCTGTTTCCATTCACGAAGCCTGCAATACAAGAATGGGTCAAATAATCAGACAACAGCTTACAGAGTTCATCTTCAAAACTACCAAAAAAGCCATGTTTGAACAGTTTTATTCTCATATTTCTTTAGAATCTACAAACTCAATTCAATAATAAAATAAAAAAATCAAAATAAACACAAGCCAAAGGATATTCTCCTCCACAGATAAAGAAATATCACCACTCCACCGTCTCACAACAACAACAATAACAAACATGAGTCTTCTTTGAAAGCATACATATGTGAAAGGAAATGCAGGGATTCTCACAAATGAAACAACAAATAAATAACAAAAGAATCATCCATATTAGTAATAATTAAGGAGTTGGATCATCTAAAACAAAGTATTACAAAACAGTTCACAACAAAATATATATTTATGTACTAAGACTTCTTGCAACAGACTAAGGGACTCTGAAAATGCTAAACAGCAGTGGAACGAGAGACCAAAAGATCCAGAATATTTTGAGAATTACAAAAAAACATGGGCAAAGGAAAGATATTTCTAGAACAAAGAAATTTTAATTCAACTCTAGTTCAACTACCAAATCTGGAAGCATCAATGGAAGAAATAGAGTTGATGGATTTATGGAACAAAATACATAACAAGGATTGAGAAGATGACTTGCATTCATATAAGTAAACGCAAACGCAATGTGTAAAAACATGAAAGGAGGCAGATAGCTAGCAAAACAACCCATCTAAGACAATCGAGATTCAAAAAAGAGGAGGCACCTAAGGTTTCCAATAATTGATTACAGCATGAACTTCTCTGCACGATTCCTGCATCCATACAAGCAATCTACTTTAGTTCTAACTCAAATTCCCCAGTCAAATGAATTCCAAAAGGGTTAAAAGCTCTCGTTGTAATCGATACTTTTAGCCCAATATCCTCCAAAATTTCAAGAACCAAATGCCACAAATACAAGACAATTAATCACAATTGAAAATCAAGAAGTTACTTGATAAACTATTCATCCTCTTGAGTTTCTCACTTGTACATCCAATGATTATTCAAAATTGTTAACCACATTAAGACGACCCCTTCAAAGAATTTTTCCATATGGAACAACCAAAATCAACTTATTATTGATGCATTTCCAATGCATAGCATACCAATCTTTTTTTAGCAACATCTTTTGAAAAACCAATTCTAATCACATGGTTGGATTGTTTCATTTTTGTGGAATCAAATAAATGAAAATACAACAGAGGGAACTCACCCTCATAATCACCAAATCAACGCATAGGCTTCCTTTGGGCCAAAATACAATAAGGTTTAAAGCATCTACTCCTCTCATAATAACTAGGAAACTAGTATTCACTTACCTCATTCTTCATAAGAAATATAAAGGTTTGAGTTGTAACAATTTGAATTATTACGATATCCTTCTAAAATTTTTGTTCAGTCAGAAGTTAGTGTTGGTAAAGATGTCTATCTTAGTTTCATCTCTCTTTTTAGTGAAGGAAATACACATAAGCAGCAATATCTGTACACTATCTAATACAAAAGCAGACTAGTTATCTAAAAAACGATTAGGCTTAATAAATACACTCTGAGATATGGATGGAAGAAATACTCTCAAGAGACCAAAGTATACCAGAATTCCTTAAAAAATATTTACCTTCTTATAACGGGGGAACAAAGTTAAAATGTACACCCCAAATTGAAGCATCCATGGATCCTATATGCCTAAATTCAAAACTTGACAACAAGGGAGATGGATATGTTTAACTTCTAGAAAAGAGTTGTAGCAGGGTTAATATATATATTAGATATGGTCATGAAGGATTGTCTAAAGGGTTATCCCTTTCCCTTTGCCATCAAATCATCACCATGATGTACCTCCAAATGAGTTAAATAGTATCAACAATTTCTGAAATTGAATTTCCTGGAAAAATCCTCCCCCCAAATCCATAAACATTAATACAAAAGCACCTTTGATCCACGTTTAACATAATAAATTTTATCCTTTCCATTTGAAACAAATAATAAAGGGTTGATGCATTCAACAGAGGAGGAGACAAAATAAAGAAGAAAGAAGAAAAGAAGAAAAGAAGAAAGAAGAACCAGAAAGCGAGAGAGATGAAAGAGAGAAGATACAGTTTATACAATAAAATGATGGACCTACACAATCACATTCAAATATATGCAAATTGAACTATGAGAAAGCTAGTGAACGAGACAGAATAACTATTCTTCCAATTGCAACTCATGACTTACGTGGACGTTGAAGTCATAAGGCATGGACATGGGAAGGAGCTTCCTAAGTTGAAAGACCTGGTAATGTGACACGACACAAGGAAGAACTTTTAAATGTCTAAGCTGATATAAGAACATATCTAACAAGGTGTTTAGAATTACCATTGGTTCCAAAGATAGTTTATTAAATTCGTTAAGTTCAAATACTTTTTATCAATTTTTGCTGAGTTTTTGTATTCAGGTTTTCATATTATCCATGAAAAGTTGTGTTATTTCTTCAAAAAAGAAGGAAACATAAAAAGCAACATTACCTTAAAAGAAACTTTTAACCTTTCAGTAGCAAGGATAGTAGTTGTTGCTTACCTCACTAGGAGTTTCAAGGAGGGGTTGCTTGTCTATTGAACCAACAATCTTGCTTAGTGTGATTATCCACTAGAGAAGCATACCTGATTTAATGAGTACATCTTAAGTCACAAAAGGTGAACAGTTTATAAGCCAATTATTAACAATGTGTGGTGAAGTATTTCTCAAATCCACACGTTGATGTAAATGATATATGTGAATGTGACATTAGATACAGTGGGCAATTTCATAATTGTCTCTTAGAACTTTGGTTTCAGGTGAAAGTACGTTTACATACATGATGCAAGTAGTTAAATACTTATAATGGACTTCGGTGAAAATTAACGGTGCAAAAATGTGAAGCCATTCATGTACGTTATAAGTATCATGCAGAAACGAACCTTCTCTCAAATACCACAAGTGTAGCGGAAGAGTCGGACATGACGGAATGATCAAAATTTGGAGGTAGATAAGCAAATGAATCGACCTGCATTTCACATATTGAATTTTAAAAAATATATTTATTTATTTATATTTCCTCTTCCTTTTTTTTAGATAAGAAACAGAGACCAGATAATGAAAATAAAGGCATATAAAAATGCATATCAATCAATATAATTCGGTGGGCTGCAGTTATCTGTGAACTTCTCACTAGCAACAAATCCTCACCCTTCATGCAACCAAGCATTCAAACAGGCCAATAAAGAATGTCGAAGGAATAGTATTGTAATACACCCCAATGGACCTACACAACCACCAGCACTGCAAGACAATTTGGGACAATTGTTTTTTTTTTAGATTTAAGATGGCAAGATCAACGTAAGTAAGCAACACCTTAGATTTTCAGATTTTCACCCAATTCAAACTTCGATACACATGTGAAAAACAAATCACCAAAACAAACAGGATAATAAATTTAAAGACACCTTTTGGTAAGCAAGAGAATCAACAATCGAAAGACAAAATTATAACCTGTTCCCATTTCTCCTTCACTCAATAACATAGACAAAATGATAAAAAAAAAAAGAACACCAATCATAGAAATAATCGGCAAAGAATAGAGAGAGAGAGAGAGTTTACAGGGTGATCAAAGAGCGAGCGAGATTAAAAATTGAAATAAGCGAGTATGAGGAAACATTGGAAATCCCACTTACCTTCTTCACCACCGCCAACAGCCGCTACGTAGTAACTAGCGGGATGAGATGGAACTATTTTGTTGTCGGTGACGAAAATGTCTGCATCAGTGGATTGATGTGGAAGATCTTCATATTGTGAAGGTTGGTGTTTGGATTTGAGAGAAGTTGAAGGGAACCAAGCCGCAGAGACATCATTTTCTGTAAATCACTACTCACAAATCGCATCCTGTCACCTTCAACACCAACTCTACTTCAAGCTGGTTCCATAACCCTAACCTCCGAAGCTACAATGGTGGCGTCAATGCCAAAATTTCCCAAACCATCTTCCTCTTCATGTGAATCAATCTCTCGATCATCCTCCTCATCATCTTCCTCTATCCTATCTTTAGAACTGTAGAAGAAAAATGAGAGAATAGTATGGAGAATAGAGTGTTTGGTATTTGGAATTGATAGAATGAAGAGAAAATGAAATCCAAGAGAGGATTGGAGAGATCTCACCGAAAGTTAAGAAAATGAAAAGGGGAATTTGGGGGGAAGCTCACGCGAGCAAATCCAAAAACGTGAGAAGATTCGAAGACGTCCACGACGACGGCGACGGTGTAAGAAGGGCGACGGTGACGGCGACGGAGTGAGAAGATTGGAATGCATTCACCGGTGAGAATGTGAGAAGAAATGGACAGATTCCATTTGGAGAAGAAAGGGTTTGCGAGCGGGAGCGGGAGAAGATTGAAAGAGTAAAGTAAGAGAGAGAATTTGTTATTTTTTTACAAAATGAAATTATTAAAATAAAAATTTAAATGGACCTTTAATGTCAGTTTAAAACCGACATTAAAGCTTGTTATTTTTTAAAAAAATAAAATTATTAAAATTTAAATTTAAATGAACCTTTAATGTCGGTTTTCAAAATGGCGGACCTTTAATGTCGGTTTAAAACCGACATTAAACATCCGCCTTTTCAAAACCGACATTAATGCTCATTTTGCATTTTTTCCAACCGACATTAAAGCCTATATTTCTTCTAGTGGAAATTTCCATGCACATGTTTTGCATGAAAGTAAGTTTAAGATTATAATTAGAACAAGACCTTGTTCCACTTCCGTATAATTTTCTGAACACATCAAACTTTAGTAAAAGTTTTCGAGCCCTTTTGGGATAATTAATTGATCAACCCAATAATTTTTTTTTTCCTTTCATCATTTTTAAAATATCTTTTAAATTTTCGTATGTGTGATTATAATGAAAAGAAAACTATTCAGTGTTTACACCTATTTTTTACCAACAGAGGGAGGTATCCAAATGAAAAACCTATCACATACAAAAGGGAGAGTAAAAAACAGTAACATGGCAGTTTTTGTTCTTTTCTAAAAATGATGTTTTAAAATTTTCAATTTTTGAAATTTTTTTTTGTATTTTTAAAATCGAGAGAAAGTGGTGTAAATGAAATATTTGTGTATTTAGTTTCAGAAAAGAATGTAGCACATATCGATAACGATGGGAGTTATGAAGATAGGAAGTATGAAACAGAATTGCCAGGGTCTGGCTGGACAGGAGGCAGTGGCTTATGGAGAAAAAGCCGTAAAAGAAGAGGCGGCGGTGGAAATTAAGGAGGAGGCAGAAACTGAGATCCATCATAACACATATGTAATATATGATGAATGTTTGAAGGAATAGAAGTATGTGTGTATAAGATAAGTATAACTATCGATGTTTGATCAATTCACGAAACAGAGTTATTCCAATAAGGTTTGAAGCTGTGGATTTCCCTCGTGAAGTATGTTTGTCATTGCCAAC

mRNA sequence

ATGTGTATGCTTATTAGTTATGTTCGCTTTAGCTATATTAATTATTATATGATTTGGATAAGGATGCGTTTAAAATTATATATATGTGTGTGGAGTTGTGCCCCTACATATGAAATCGTAATACATGTACAATTAATCCTCAACTTTTCTTCGGAAGGGAAAATGAAGTCCAAGTATTCTCTGTTTTTATGTCTTCTACTTTTGTCCTTTTTAGTTATCTCATGCACTATACAAATCCACACAACTGAAGATGAGAAACAAGTTTCAGAAAAGAATGTAGCACATATCGATAACGATGGGAGTTATGAAGATAGGAAGTATGAAACAGAATTGCCAGGGTCTGGCTGGACAGGAGGCAGTGGCTTATGGAGAAAAAGCCGTAAAAGAAGAGGCGGCGGTGGAAATTAAGGAGGAGGCAGAAACTGAGATCCATCATAACACATATGTAATATATGATGAATGTTTGAAGGAATAGAAGTATGTGTGTATAAGATAAGTATAACTATCGATGTTTGATCAATTCACGAAACAGAGTTATTCCAATAAGGTTTGAAGCTGTGGATTTCCCTCGTGAAGTATGTTTGTCATTGCCAAC

Coding sequence (CDS)

ATGTGTATGCTTATTAGTTATGTTCGCTTTAGCTATATTAATTATTATATGATTTGGATAAGGATGCGTTTAAAATTATATATATGTGTGTGGAGTTGTGCCCCTACATATGAAATCGTAATACATGTACAATTAATCCTCAACTTTTCTTCGGAAGGGAAAATGAAGTCCAAGTATTCTCTGTTTTTATGTCTTCTACTTTTGTCCTTTTTAGTTATCTCATGCACTATACAAATCCACACAACTGAAGATGAGAAACAAGTTTCAGAAAAGAATGTAGCACATATCGATAACGATGGGAGTTATGAAGATAGGAAGTATGAAACAGAATTGCCAGGGTCTGGCTGGACAGGAGGCAGTGGCTTATGGAGAAAAAGCCGTAAAAGAAGAGGCGGCGGTGGAAATTAA

Protein sequence

MCMLISYVRFSYINYYMIWIRMRLKLYICVWSCAPTYEIVIHVQLILNFSSEGKMKSKYSLFLCLLLLSFLVISCTIQIHTTEDEKQVSEKNVAHIDNDGSYEDRKYETELPGSGWTGGSGLWRKSRKRRGGGGN

Homology

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BLAST of Cmc11g0295271 vs. NCBI nr
Match: XP_031740553.1 (acanthoscurrin-1-like [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 2.8e-16
Identity = 55/83 (66.27%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 55  MKSKYSLFLCLLLLSFLVISCTIQIHTTEDEKQVSEKNVAHIDNDGSYEDRKYETELP-- 114
           MKSKYSLF CLLLLS LVIS   QIHTT+DEKQVS K+VAH+DNDGSYED KY T  P  
Sbjct: 1   MKSKYSLFFCLLLLSVLVISWATQIHTTQDEKQVSAKDVAHVDNDGSYEDGKYATGPPPG 60

Query: 115 --GSGWTGGSGLWRKSRKRRGGG 134
             G G  GG G+WR    + GGG
Sbjct: 61  WGGFGGGGGGGVWRGGGGKGGGG 83

The following BLAST results are available for this feature:

BLAST of Cmc11g0295271 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740553.1	2.8e-16	66.27	acanthoscurrin-1-like [Cucumis sativus]	[more]

BLAST of Cmc11g0295271 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0295271 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0295271 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0295271.1	Cmc11g0295271.1	mRNA