Cmc11g0295131 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0295131
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 12309011 .. 12309532 (+)
RNA-Seq Expression	Cmc11g0295131
Synteny	Cmc11g0295131

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCAAGCGAGCTTAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAAGGATACATCAGGCCTAGTGTTTCGCCGTGGGGAGCACCAGTGGTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCATTTACCATGCATCGATGACTTATTTGATCAACTAAGGGGAGCAGCATTGTTCTCTAAGATTGACTTAAGGTCAGAATACCACCAGGTGAAGGTTAGAGAATCAGATATTGCTAAGACAGCATTTAGAATGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAATGAATGCGTCAGCGGCTTTCATGGATATCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCGATTGACAGAGAATCCCATGAGGAACATCTGAGGATTGTTCTACAAACTCTGCGTGATAAATAG

mRNA sequence

ATGGCTCCAAGCGAGCTTAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAAGGATACATCAGGCCTAGTGTTTCGCCGTGGGGAGCACCAGTGGTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCATTTACCATGCATCGATGACTTATTTGATCAACTAAGGGGAGCAGCATTGTTCTCTAAGATTGACTTAAGGTCAGAATACCACCAGGTGAAGGTTAGAGAATCAGATATTGCTAAGACAGCATTTAGAATGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAATGAATGCGTCAGCGGCTTTCATGGATATCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCGATTGACAGAGAATCCCATGAGGAACATCTGAGGATTGTTCTACAAACTCTGCGTGATAAATAG

Coding sequence (CDS)

ATGGCTCCAAGCGAGCTTAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAAGGATACATCAGGCCTAGTGTTTCGCCGTGGGGAGCACCAGTGGTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCATTTACCATGCATCGATGACTTATTTGATCAACTAAGGGGAGCAGCATTGTTCTCTAAGATTGACTTAAGGTCAGAATACCACCAGGTGAAGGTTAGAGAATCAGATATTGCTAAGACAGCATTTAGAATGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAATGAATGCGTCAGCGGCTTTCATGGATATCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCGATTGACAGAGAATCCCATGAGGAACATCTGAGGATTGTTCTACAAACTCTGCGTGATAAATAG

Protein sequence

MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNKYHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMPFGLMNASAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLRDK

Homology

[Close]

BLAST of Cmc11g0295131 vs. NCBI nr
Match: KAA0053247.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 339.7 bits (870), Expect = 1.4e-89
Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 573 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK 632

Query: 61  YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMPFGLM 120
           YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVM FGLM
Sbjct: 633 YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMSFGLM 692

Query: 121 NASAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTL 171
           NA AAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTL
Sbjct: 693 NAPAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTL 742

[Close]

BLAST of Cmc11g0295131 vs. NCBI nr
Match: TYK09834.1 (Retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 332.4 bits (851), Expect = 2.3e-87
Identity = 162/173 (93.64%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAP+VFVKKKDGTLRLCIDYRQLNKV IRNK
Sbjct: 212 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPMVFVKKKDGTLRLCIDYRQLNKVIIRNK 271

Query: 61  YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMPFGLM 120
           YHLPCIDDLFDQLRGAALFSKID RS+YHQ+KVRESDIAKTAFR+RY HYEFRVMPFGL 
Sbjct: 272 YHLPCIDDLFDQLRGAALFSKIDFRSKYHQLKVRESDIAKTAFRIRYRHYEFRVMPFGLT 331

Query: 121 NASAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLRDK 174
           NA AAFMDIMNRIFHQYLDQF+IVFIDDILVYSIDRESHEEHLRI+LQTLRDK
Sbjct: 332 NAPAAFMDIMNRIFHQYLDQFLIVFIDDILVYSIDRESHEEHLRIILQTLRDK 384

[Close]

BLAST of Cmc11g0295131 vs. NCBI nr
Match: KAA0033652.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 324.7 bits (831), Expect = 4.8e-85
Identity = 160/173 (92.49%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAPV+FVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 417 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 476

Query: 61  YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMPFGLM 120
           Y LP IDDLFDQLRGAALFSKIDLRS YHQ+KVRESDIAKT F+ RYGHYEFRVMPFGL 
Sbjct: 477 YPLPHIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFKTRYGHYEFRVMPFGLT 536

Query: 121 NASAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLRDK 174
           NA A FMD+MNRIFHQYLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLRDK
Sbjct: 537 NAPAIFMDLMNRIFHQYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLRDK 589

[Close]

BLAST of Cmc11g0295131 vs. NCBI nr
Match: TYK27290.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 324.7 bits (831), Expect = 4.8e-85
Identity = 160/173 (92.49%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAPV+FVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 594 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 653

Query: 61  YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMPFGLM 120
           Y LP IDDLFDQLRGAALFSKIDLRS YHQ+KVRESDIAKTAFR RYGHYEFRVMPFGL 
Sbjct: 654 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 713

Query: 121 NASAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLRDK 174
           NA A FMD+MNRIFH+YLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLR+K
Sbjct: 714 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREK 766

[Close]

BLAST of Cmc11g0295131 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 324.7 bits (831), Expect = 4.8e-85
Identity = 160/173 (92.49%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAPV+FVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 665 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61  YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMPFGLM 120
           Y LP IDDLFDQLRGAALFSKIDLRS YHQ+KVRESDIAKTAFR RYGHYEFRVMPFGL 
Sbjct: 725 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121 NASAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLRDK 174
           NA A FMD+MNRIFH+YLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLR+K
Sbjct: 785 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREK 837

[Close]

BLAST of Cmc11g0295131 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-34
Identity = 70/131 (53.44%), Postives = 97/131 (74.05%), Query Frame = 0


Query: 42  TLRLCIDYRQLNKVTIRNKYHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKT 101
           +LR+CIDYR L KVTI+NKY +P +DDLFD+L  A  F+K+DLRS Y QV++ + D  KT
Sbjct: 5   SLRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKT 64

Query: 102 AFRMRYGHYEFRVMPFGLMNASAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRES--- 161
               RYG +EFRVMPFGL NA A F ++MN + ++YLD FV+V++DD++VY+I   S   
Sbjct: 65  TCVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDLVVYTIYSNSLHE 124

Query: 162 HEEHLRIVLQT 170
           H +HLR+V ++
Sbjct: 125 HIKHLRVVRES 135

[Close]

BLAST of Cmc11g0295131 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 147.1 bits (370), Expect = 1.8e-34
Identity = 76/167 (45.51%), Postives = 107/167 (64.07%), Query Frame = 0


Query: 7   KELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNKYHLPCI 66
           +E+   +Q+L+D  +I PS SP  +PVV V KKDGT RLC+DYR LNK TI + + LP I
Sbjct: 610 QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 669

Query: 67  DDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMPFGLMNASAAF 126
           D+L  ++  A +F+ +DL S YHQ+ +   D  KTAF    G YE+ VMPFGL+NA + F
Sbjct: 670 DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 729

Query: 127 MDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLRDK 174
              M   F     +FV V++DDIL++S   E H +HL  VL+ L+++
Sbjct: 730 ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNE 774

[Close]

BLAST of Cmc11g0295131 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 1.8e-34
Identity = 76/167 (45.51%), Postives = 107/167 (64.07%), Query Frame = 0


Query: 7   KELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNKYHLPCI 66
           +E+   +Q+L+D  +I PS SP  +PVV V KKDGT RLC+DYR LNK TI + + LP I
Sbjct: 636 QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 695

Query: 67  DDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMPFGLMNASAAF 126
           D+L  ++  A +F+ +DL S YHQ+ +   D  KTAF    G YE+ VMPFGL+NA + F
Sbjct: 696 DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 755

Query: 127 MDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLRDK 174
              M   F     +FV V++DDIL++S   E H +HL  VL+ L+++
Sbjct: 756 ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNE 800

[Close]

BLAST of Cmc11g0295131 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-30
Identity = 64/172 (37.21%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMPFGLM 120
           Y LP I+ L  +++G+ +F+K+DL+S YH ++VR+ D  K AFR   G +E+ VMP+G+ 
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NASAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLRD 173
            A A F   +N I  +  +  V+ ++DDIL++S     H +H++ VLQ L++
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKN 591

[Close]

BLAST of Cmc11g0295131 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-30
Identity = 64/172 (37.21%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMPFGLM 120
           Y LP I+ L  +++G+ +F+K+DL+S YH ++VR+ D  K AFR   G +E+ VMP+G+ 
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NASAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLRD 173
            A A F   +N I  +  +  V+ ++DDIL++S     H +H++ VLQ L++
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKN 591

[Close]

BLAST of Cmc11g0295131 vs. ExPASy TrEMBL
Match: A0A5A7UFH6 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00370 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 7.0e-90
Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 573 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK 632

Query: 61  YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMPFGLM 120
           YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVM FGLM
Sbjct: 633 YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMSFGLM 692

Query: 121 NASAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTL 171
           NA AAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTL
Sbjct: 693 NAPAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTL 742

[Close]

BLAST of Cmc11g0295131 vs. ExPASy TrEMBL
Match: A0A5D3CF61 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4388G00010 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.1e-87
Identity = 162/173 (93.64%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAP+VFVKKKDGTLRLCIDYRQLNKV IRNK
Sbjct: 212 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPMVFVKKKDGTLRLCIDYRQLNKVIIRNK 271

Query: 61  YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMPFGLM 120
           YHLPCIDDLFDQLRGAALFSKID RS+YHQ+KVRESDIAKTAFR+RY HYEFRVMPFGL 
Sbjct: 272 YHLPCIDDLFDQLRGAALFSKIDFRSKYHQLKVRESDIAKTAFRIRYRHYEFRVMPFGLT 331

Query: 121 NASAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLRDK 174
           NA AAFMDIMNRIFHQYLDQF+IVFIDDILVYSIDRESHEEHLRI+LQTLRDK
Sbjct: 332 NAPAAFMDIMNRIFHQYLDQFLIVFIDDILVYSIDRESHEEHLRIILQTLRDK 384

[Close]

BLAST of Cmc11g0295131 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.3e-85
Identity = 160/173 (92.49%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAPV+FVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 627 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 686

Query: 61  YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMPFGLM 120
           Y LP IDDLFDQLRGAALFSKIDLRS YHQ+KVRESDIAKTAFR RYGHYEFRVMPFGL 
Sbjct: 687 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 746

Query: 121 NASAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLRDK 174
           NA A FMD+MNRIFH+YLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLR+K
Sbjct: 747 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREK 799

[Close]

BLAST of Cmc11g0295131 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.3e-85
Identity = 160/173 (92.49%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAPV+FVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 665 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61  YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMPFGLM 120
           Y LP IDDLFDQLRGAALFSKIDLRS YHQ+KVRESDIAKTAFR RYGHYEFRVMPFGL 
Sbjct: 725 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121 NASAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLRDK 174
           NA A FMD+MNRIFH+YLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLR+K
Sbjct: 785 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREK 837

[Close]

BLAST of Cmc11g0295131 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.3e-85
Identity = 160/173 (92.49%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVVFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAPV+FVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 665 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61  YHLPCIDDLFDQLRGAALFSKIDLRSEYHQVKVRESDIAKTAFRMRYGHYEFRVMPFGLM 120
           Y LP IDDLFDQLRGAALFSKIDLRS YHQ+KVRESDIAKTAFR RYGHYEFRVMPFGL 
Sbjct: 725 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121 NASAAFMDIMNRIFHQYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLRDK 174
           NA A FMD+MNRIFH+YLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLR+K
Sbjct: 785 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREK 837

The following BLAST results are available for this feature:

BLAST of Cmc11g0295131 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053247.1	1.4e-89	98.82	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK09834.1	2.3e-87	93.64	Retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0033652.1	4.8e-85	92.49	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK27290.1	4.8e-85	92.49	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0035455.1	4.8e-85	92.49	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1...	[more]

BLAST of Cmc11g0295131 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31843	1.4e-34	53.44	RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1	[more]
Q99315	1.8e-34	45.51	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.8e-34	45.51	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P0CT41	1.6e-30	37.21	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.6e-30	37.21	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0295131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UFH6	7.0e-90	98.82	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CF61	1.1e-87	93.64	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U2V7	2.3e-85	92.49	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BS67	2.3e-85	92.49	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50...	[more]
A0A5D3BHI1	2.3e-85	92.49	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

BLAST of Cmc11g0295131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..172 e-value: 4.5E-21 score: 75.4
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..173 score: 11.253501
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 9.2E-71 score: 239.5
None	No IPR available	PANTHER	PTHR15503:SF11	RETROTRANSPOSON GAG-LIKE PROTEIN 6	coord: 4..172
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..172 e-value: 3.18772E-76 score: 223.626
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..172 e-value: 9.2E-71 score: 239.5
IPR032567	LDOC1-related	PANTHER	PTHR15503	LDOC1 RELATED	coord: 4..172
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0295131.1	Cmc11g0295131.1	mRNA