Cmc11g0295011 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0295011
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr11: 12011982 .. 12012440 (-)
RNA-Seq Expression	Cmc11g0295011
Synteny	Cmc11g0295011

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGATCATAAACCACGAAGCAAATTAGTATTAAATGAAGCTACTGATGAATCAACAAGGGTTTTTGATGAAGTTGGTCCCTCATCAAGAGTTGATGAAACCACCACATCAAGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGATGCAGTGGGAGGATTGTATCACAACCTAACCGTTATTTGGGTTTAACTGAAACTCAGGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCTTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCATTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTCAAAGCTAGACTTGTTGCAAAAGGGTAA

mRNA sequence

ATGAGAGATCATAAACCACGAAGCAAATTAGTATTAAATGAAGCTACTGATGAATCAACAAGGGTTTTTGATGAAGTTGGTCCCTCATCAAGAGTTGATGAAACCACCACATCAAGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGATGCAGTGGGAGGATTGTATCACAACCTAACCGTTATTTGGGTTTAACTGAAACTCAGGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCTTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCATTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTCAAAGCTAGACTTGTTGCAAAAGGGTAA

Coding sequence (CDS)

ATGAGAGATCATAAACCACGAAGCAAATTAGTATTAAATGAAGCTACTGATGAATCAACAAGGGTTTTTGATGAAGTTGGTCCCTCATCAAGAGTTGATGAAACCACCACATCAAGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGATGCAGTGGGAGGATTGTATCACAACCTAACCGTTATTTGGGTTTAACTGAAACTCAGGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCTTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCATTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTCAAAGCTAGACTTGTTGCAAAAGGGTAA

Protein sequence

MRDHKPRSKLVLNEATDESTRVFDEVGPSSRVDETTTSSQSHPSQSLRMPRCSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSLWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG

Homology

[Close]

BLAST of Cmc11g0295011 vs. NCBI nr
Match: TYK28885.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 294.3 bits (752), Expect = 6.1e-76
Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 2   RDHKPRSKLVLNEATDESTRVFDEVGPSSRVDETTTSSQSHPSQSLRMPRCSGRIVSQPN 61
           RDHKPRSKLVLNEATDESTRV DEVGPSSRVDETTTS QSHPSQSLRMPR SGR+VSQPN
Sbjct: 446 RDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPN 505

Query: 62  RYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSLWELVDLPEG 121
           RYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKA+DLEMESMYFNS+WELVDLPEG
Sbjct: 506 RYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAIDLEMESMYFNSVWELVDLPEG 565

Query: 122 VKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 153
           VKPIGCKWIYKRKRDSAGKVQTFKARLVAKG
Sbjct: 566 VKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 596

[Close]

BLAST of Cmc11g0295011 vs. NCBI nr
Match: TYK15984.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 293.9 bits (751), Expect = 8.0e-76
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MRDHKPRSKLVLNEATDESTRVFDEVGPSSRVDETTTSSQSHPSQSLRMPRCSGRIVSQP 60
           MR+HKPRSKLVL+EATDESTRV DEVGPSSRVDETTTS QSHPSQSLRMPR SGR+VSQP
Sbjct: 243 MRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQP 302

Query: 61  NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSLWELVDLPE 120
           NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNS+WELVDLPE
Sbjct: 303 NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPE 362

Query: 121 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 153
           GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG
Sbjct: 363 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 394

[Close]

BLAST of Cmc11g0295011 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 293.9 bits (751), Expect = 8.0e-76
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MRDHKPRSKLVLNEATDESTRVFDEVGPSSRVDETTTSSQSHPSQSLRMPRCSGRIVSQP 60
           MR+HKPRSKLVL+EATDESTRV DEVGPSSRVDETTTS QSHPSQSLRMPR SGR+VSQP
Sbjct: 633 MRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQP 692

Query: 61  NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSLWELVDLPE 120
           NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNS+WELVDLPE
Sbjct: 693 NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPE 752

Query: 121 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 153
           GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG
Sbjct: 753 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 784

[Close]

BLAST of Cmc11g0295011 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 293.9 bits (751), Expect = 8.0e-76
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MRDHKPRSKLVLNEATDESTRVFDEVGPSSRVDETTTSSQSHPSQSLRMPRCSGRIVSQP 60
           MR+HKPRSKLVL+EATDESTRV DEVGPSSRVDETTTS QSHPSQSLRMPR SGR+VSQP
Sbjct: 633 MRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQP 692

Query: 61  NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSLWELVDLPE 120
           NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNS+WELVDLPE
Sbjct: 693 NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPE 752

Query: 121 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 153
           GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG
Sbjct: 753 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 784

[Close]

BLAST of Cmc11g0295011 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 293.9 bits (751), Expect = 8.0e-76
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MRDHKPRSKLVLNEATDESTRVFDEVGPSSRVDETTTSSQSHPSQSLRMPRCSGRIVSQP 60
           MR+HKPRSKLVL+EATDESTRV DEVGPSSRVDETTTS QSHPSQSLRMPR SGR+VSQP
Sbjct: 507 MRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQP 566

Query: 61  NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSLWELVDLPE 120
           NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNS+WELVDLPE
Sbjct: 567 NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPE 626

Query: 121 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 153
           GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG
Sbjct: 627 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 658

[Close]

BLAST of Cmc11g0295011 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12
Identity = 48/143 (33.57%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 13  NEATDESTRVFDEVGPSSRVDETTTSSQSHPSQSLRMP---RCSGRIVSQPNRYLGLTET 72
           +E +++  +  + +    ++DE     + HP+Q        R S R   +  RY   +  
Sbjct: 745 DEVSEQGEQPGEVIEQGEQLDEGVEEVE-HPTQGEEQHQPLRRSERPRVESRRY--PSTE 804

Query: 73  QVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSLWELVDLPEGVKPIGCKW 132
            V+I DD   +P S K+ ++  +K+Q +KAM  EMES+  N  ++LV+LP+G +P+ CKW
Sbjct: 805 YVLISDD--REPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKW 864

Query: 133 IYKRKRDSAGKVQTFKARLVAKG 153
           ++K K+D   K+  +KARLV KG
Sbjct: 865 VFKLKKDGDCKLVRYKARLVVKG 882

[Close]

BLAST of Cmc11g0295011 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.7e-07
Identity = 42/140 (30.00%), Postives = 64/140 (45.71%), Query Frame = 0


Query: 28   PSSRVDETTTSSQSHPSQSLRMPRCSGRIVSQPNRYLGL-TETQVVIPDDGVEDP---LS 87
            PS+ + E  + S S  S     P      + Q N    + T +      DG+  P    S
Sbjct: 869  PSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYS 928

Query: 88   Y----------KQAMNDVDKDQWVKAMDLEMESMYFNSLWELV-DLPEGVKPIGCKWIYK 147
            Y          + A+  +  D+W +AM  E+ +   N  W+LV   P  V  +GC+WI+ 
Sbjct: 929  YATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFT 988

Query: 148  RKRDSAGKVQTFKARLVAKG 153
            +K +S G +  +KARLVAKG
Sbjct: 989  KKFNSDGSLNRYKARLVAKG 1008

[Close]

BLAST of Cmc11g0295011 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.3e-07
Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 80   DPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSLWELVDLPEG-VKPIGCKWIYKRKRDSA 139
            +P +  QA+ D   ++W  AM  E+ +   N  W+LV  P   V  +GC+WI+ +K +S 
Sbjct: 955  EPRTAIQALKD---ERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSD 1014

Query: 140  GKVQTFKARLVAKG 153
            G +  +KARLVAKG
Sbjct: 1015 GSLNRYKARLVAKG 1025

[Close]

BLAST of Cmc11g0295011 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 8.2e-07
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 0


Query: 96  WVKAMDLEMESMYFNSLWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 153
           W +AM  E++++  N  W LV  P     +GCKW++K K  S G +   KARLVAKG
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKG 96

[Close]

BLAST of Cmc11g0295011 vs. ExPASy TrEMBL
Match: A0A5D3DZX8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G00320 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.0e-76
Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 2   RDHKPRSKLVLNEATDESTRVFDEVGPSSRVDETTTSSQSHPSQSLRMPRCSGRIVSQPN 61
           RDHKPRSKLVLNEATDESTRV DEVGPSSRVDETTTS QSHPSQSLRMPR SGR+VSQPN
Sbjct: 446 RDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPN 505

Query: 62  RYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSLWELVDLPEG 121
           RYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKA+DLEMESMYFNS+WELVDLPEG
Sbjct: 506 RYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAIDLEMESMYFNSVWELVDLPEG 565

Query: 122 VKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 153
           VKPIGCKWIYKRKRDSAGKVQTFKARLVAKG
Sbjct: 566 VKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 596

[Close]

BLAST of Cmc11g0295011 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.9e-76
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MRDHKPRSKLVLNEATDESTRVFDEVGPSSRVDETTTSSQSHPSQSLRMPRCSGRIVSQP 60
           MR+HKPRSKLVL+EATDESTRV DEVGPSSRVDETTTS QSHPSQSLRMPR SGR+VSQP
Sbjct: 633 MRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQP 692

Query: 61  NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSLWELVDLPE 120
           NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNS+WELVDLPE
Sbjct: 693 NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPE 752

Query: 121 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 153
           GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG
Sbjct: 753 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 784

[Close]

BLAST of Cmc11g0295011 vs. ExPASy TrEMBL
Match: A0A5D3BUN8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00360 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.9e-76
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MRDHKPRSKLVLNEATDESTRVFDEVGPSSRVDETTTSSQSHPSQSLRMPRCSGRIVSQP 60
           MR+HKPRSKLVL+EATDESTRV DEVGPSSRVDETTTS QSHPSQSLRMPR SGR+VSQP
Sbjct: 507 MRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQP 566

Query: 61  NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSLWELVDLPE 120
           NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNS+WELVDLPE
Sbjct: 567 NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPE 626

Query: 121 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 153
           GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG
Sbjct: 627 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 658

[Close]

BLAST of Cmc11g0295011 vs. ExPASy TrEMBL
Match: A0A5D3CYF4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G001110 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.9e-76
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MRDHKPRSKLVLNEATDESTRVFDEVGPSSRVDETTTSSQSHPSQSLRMPRCSGRIVSQP 60
           MR+HKPRSKLVL+EATDESTRV DEVGPSSRVDETTTS QSHPSQSLRMPR SGR+VSQP
Sbjct: 243 MRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQP 302

Query: 61  NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSLWELVDLPE 120
           NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNS+WELVDLPE
Sbjct: 303 NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPE 362

Query: 121 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 153
           GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG
Sbjct: 363 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 394

[Close]

BLAST of Cmc11g0295011 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.9e-76
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MRDHKPRSKLVLNEATDESTRVFDEVGPSSRVDETTTSSQSHPSQSLRMPRCSGRIVSQP 60
           MR+HKPRSKLVL+EATDESTRV DEVGPSSRVDETTTS QSHPSQSLRMPR SGR+VSQP
Sbjct: 507 MRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQP 566

Query: 61  NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSLWELVDLPE 120
           NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNS+WELVDLPE
Sbjct: 567 NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPE 626

Query: 121 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 153
           GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG
Sbjct: 627 GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 658

[Close]

BLAST of Cmc11g0295011 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 68.2 bits (165), Expect = 6.6e-12
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 79  EDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSLWELVDLPEGVKPIGCKWIYKRKRDSA 138
           ++P +Y +A   +    W  AMD E+ +M     WE+  LP   KPIGCKW+YK K +S 
Sbjct: 84  KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 139 GKVQTFKARLVAKG 153
           G ++ +KARLVAKG
Sbjct: 144 GTIERYKARLVAKG 154

[Close]

BLAST of Cmc11g0295011 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 55.1 bits (131), Expect = 5.8e-08
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 0


Query: 96  WVKAMDLEMESMYFNSLWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKG 153
           W +AM  E++++  N  W LV  P     +GCKW++K K  S G +   KARLVAKG
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKG 96

The following BLAST results are available for this feature:

BLAST of Cmc11g0295011 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28885.1	6.1e-76	96.03	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK15984.1	8.0e-76	95.39	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0025945.1	8.0e-76	95.39	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0035907.1	8.0e-76	95.39	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0059226.1	8.0e-76	95.39	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0295011 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.7e-12	33.57	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q9ZT94	3.7e-07	30.00	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	6.3e-07	39.19	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P92520	8.2e-07	43.86	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc11g0295011 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DZX8	3.0e-76	96.03	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G0032...	[more]
A0A5A7TZD0	3.9e-76	95.39	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5D3BUN8	3.9e-76	95.39	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G0036...	[more]
A0A5D3CYF4	3.9e-76	95.39	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00111...	[more]
A0A5A7UYE8	3.9e-76	95.39	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]

BLAST of Cmc11g0295011 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	6.6e-12	44.59	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	5.8e-08	43.86	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 110..152 e-value: 4.0E-10 score: 39.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0295011.1	Cmc11g0295011.1	mRNA