Cmc11g0295001 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0295001
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr11: 12008245 .. 12008748 (-)
RNA-Seq Expression	Cmc11g0295001
Synteny	Cmc11g0295001

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGTGTATGGAGCTAAGGATTTATACACTGACTCTGATATCCAAATCGATAAGGATTCTAGAAAATCTACATCGGAATCAGTGTTCACCGTAAATGGGGGAGCTGTAGTATGGCGTAGCATTAAGCAAGGATGCATTATTGCAGACACTACAATGGAGGCTGAATATGTTGCTGCTTGTGAAACAGCAAAAGAAGAAGTTTGGCTTAGGAAATTTCTACATGATTTGCAAGTTATTCCAAACATGAATTTGCCCATCACTCTATATTGTGATAATAGTGGGGCAATAGCCAATTCTAAAGAAACTCGCAGCCATAAACGAGAGAAACACATAGAGAGGAAGTATCACCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCATCACCAAGATCGCTTTGAAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGAGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

mRNA sequence

ATGCTTGTGTATGGAGCTAAGGATTTATACACTGACTCTGATATCCAAATCGATAAGGATTCTAGAAAATCTACATCGGAATCAGTGTTCACCGTAAATGGGGGAGCTGTAGTATGGCGTAGCATTAAGCAAGGATGCATTATTGCAGACACTACAATGGAGGCTGAATATGTTGCTGCTTGTGAAACAGCAAAAGAAGAAGTTTGGCTTAGGAAATTTCTACATGATTTGCAAGTTATTCCAAACATGAATTTGCCCATCACTCTATATTGTGATAATAGTGGGGCAATAGCCAATTCTAAAGAAACTCGCAGCCATAAACGAGAGAAACACATAGAGAGGAAGTATCACCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCATCACCAAGATCGCTTTGAAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGAGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

Coding sequence (CDS)

ATGCTTGTGTATGGAGCTAAGGATTTATACACTGACTCTGATATCCAAATCGATAAGGATTCTAGAAAATCTACATCGGAATCAGTGTTCACCGTAAATGGGGGAGCTGTAGTATGGCGTAGCATTAAGCAAGGATGCATTATTGCAGACACTACAATGGAGGCTGAATATGTTGCTGCTTGTGAAACAGCAAAAGAAGAAGTTTGGCTTAGGAAATTTCTACATGATTTGCAAGTTATTCCAAACATGAATTTGCCCATCACTCTATATTGTGATAATAGTGGGGCAATAGCCAATTCTAAAGAAACTCGCAGCCATAAACGAGAGAAACACATAGAGAGGAAGTATCACCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCATCACCAAGATCGCTTTGAAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGAGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

Protein sequence

MLVYGAKDLYTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAEYVAACETAKEEVWLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKYHLIREIVQRGDVIITKIALKHNIADPFTKTLTAKVFESHLESLGLRDMYIR

Homology

[Close]

BLAST of Cmc11g0295001 vs. NCBI nr
Match: KAA0067492.1 (retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 335.9 bits (860), Expect = 2.0e-88
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MLVYGAKDLYTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAEYVAA 60
           MLVYGAKDLYTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAEYVAA
Sbjct: 1   MLVYGAKDLYTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAEYVAA 60

Query: 61  CETAKEEVWLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKYHLIR 120
           CETAKEEVWLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKYHLIR
Sbjct: 61  CETAKEEVWLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKYHLIR 120

Query: 121 EIVQRGDVIITKIALKHNIADPFTKTLTAKVFESHLESLGLRDMYIR 168
           EIVQRGDVIITKIALKHNIADPFTKTLTAKVFESHLESLGLRDMYIR
Sbjct: 121 EIVQRGDVIITKIALKHNIADPFTKTLTAKVFESHLESLGLRDMYIR 167

[Close]

BLAST of Cmc11g0295001 vs. NCBI nr
Match: KAA0042496.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 298.1 bits (762), Expect = 4.7e-77
Identity = 150/171 (87.72%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1   MLVYGAKDL----YTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAE 60
           MLVYGAKDL    YTDSD Q DKDSRKSTS SVFT+NGGAVVWRSIKQGC IAD+TMEAE
Sbjct: 131 MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC-IADSTMEAE 190

Query: 61  YVAACETAKEEVWLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKY 120
           YVAACE AKE VWLRKFLHDL+V+PNMNLPITLYCDNSGA+ANSKE RSHKR KHIERKY
Sbjct: 191 YVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKY 250

Query: 121 HLIREIVQRGDVIITKIALKHNIADPFTKTLTAKVFESHLESLGLRDMYIR 168
           HLIREIVQRGDVI+TKIA +HNIADPFTKTLTAKVFE HLESLGLRDMYIR
Sbjct: 251 HLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300

[Close]

BLAST of Cmc11g0295001 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 298.1 bits (762), Expect = 4.7e-77
Identity = 150/171 (87.72%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1    MLVYGAKDL----YTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAE 60
            MLVYGAKDL    YTDSD Q DKDSRKSTS SVFT+NGGAVVWRSIKQGC IAD+TMEAE
Sbjct: 1066 MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC-IADSTMEAE 1125

Query: 61   YVAACETAKEEVWLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKY 120
            YVAACE AKE VWLRKFLHDL+V+PNMNLPITLYCDNSGA+ANSKE RSHKR KHIERKY
Sbjct: 1126 YVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKY 1185

Query: 121  HLIREIVQRGDVIITKIALKHNIADPFTKTLTAKVFESHLESLGLRDMYIR 168
            HLIREIVQRGDVI+TKIA +HNIADPFTKTLTAKVFE HLESLGLRDMYIR
Sbjct: 1186 HLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc11g0295001 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 298.1 bits (762), Expect = 4.7e-77
Identity = 150/171 (87.72%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1    MLVYGAKDL----YTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAE 60
            MLVYGAKDL    YTDSD Q DKDSRKSTS SVFT+NGGAVVWRSIKQGC IAD+TMEAE
Sbjct: 940  MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC-IADSTMEAE 999

Query: 61   YVAACETAKEEVWLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKY 120
            YVAACE AKE VWLRKFLHDL+V+PNMNLPITLYCDNSGA+ANSKE RSHKR KHIERKY
Sbjct: 1000 YVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKY 1059

Query: 121  HLIREIVQRGDVIITKIALKHNIADPFTKTLTAKVFESHLESLGLRDMYIR 168
            HLIREIVQRGDVI+TKIA +HNIADPFTKTLTAKVFE HLESLGLRDMYIR
Sbjct: 1060 HLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1109

[Close]

BLAST of Cmc11g0295001 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 295.8 bits (756), Expect = 2.3e-76
Identity = 148/171 (86.55%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1    MLVYGAKDL----YTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAE 60
            MLVYGAKDL    YT+SD Q DKDSRKSTS SVFT+NGGAVVWRSIKQGC IAD+TMEAE
Sbjct: 1066 MLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGC-IADSTMEAE 1125

Query: 61   YVAACETAKEEVWLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKY 120
            YVAACE AKE VWL+KFLHDL+V+PNMNLPITLYCDNSGA+ANSKE RSHKR KHIERKY
Sbjct: 1126 YVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKY 1185

Query: 121  HLIREIVQRGDVIITKIALKHNIADPFTKTLTAKVFESHLESLGLRDMYIR 168
            HLIREIVQRGDVI+TKIA +HNIADPFTKTLTAKVFE HLESLGLRDMYIR
Sbjct: 1186 HLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc11g0295001 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.9e-25
Identity = 64/152 (42.11%), Postives = 92/152 (60.53%), Query Frame = 0


Query: 10   YTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAEYVAACETAKEEVW 69
            YTD+D+  D D+RKS++  +FT +GGA+ W+S  Q C+   TT EAEY+AA ET KE +W
Sbjct: 1178 YTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTT-EAEYIAATETGKEMIW 1237

Query: 70   LRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKYHLIREIVQRGDVI 129
            L++FL +L +         +YCD+  AI  SK +  H R KHI+ +YH IRE+V    + 
Sbjct: 1238 LKRFLQELGL---HQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLK 1297

Query: 130  ITKIALKHNIADPFTKTLTAKVFESHLESLGL 162
            + KI+   N AD  TK +    FE   E +G+
Sbjct: 1298 VLKISTNENPADMLTKVVPRNKFELCKELVGM 1325

[Close]

BLAST of Cmc11g0295001 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 90.1 bits (222), Expect = 2.5e-17
Identity = 55/153 (35.95%), Postives = 82/153 (53.59%), Query Frame = 0


Query: 10   YTDSDIQIDKDSRKSTSESVFTV-NGGAVVWRSIKQGCIIADTTMEAEYVAACETAKEEV 69
            Y DSD    +  RKST+  +F + +   + W + +Q  + A +T EAEY+A  E  +E +
Sbjct: 1251 YVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASST-EAEYMALFEAVREAL 1310

Query: 70   WLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKYHLIREIVQRGDV 129
            WL+  L  + +   +  PI +Y DN G I+ +     HKR KHI+ KYH  RE VQ   +
Sbjct: 1311 WLKFLLTSINI--KLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVI 1370

Query: 130  IITKIALKHNIADPFTKTLTAKVFESHLESLGL 162
             +  I  ++ +AD FTK L A  F    + LGL
Sbjct: 1371 CLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400

[Close]

BLAST of Cmc11g0295001 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06
Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 10  YTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAEYVAACETAKEEVW 69
           Y+D+D   D +SR+STS  +F +NGG V WRS KQ  +   +T E EY+A  E  +E VW
Sbjct: 74  YSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSST-EDEYMALSEATQEAVW 133

Query: 70  L 71
           L
Sbjct: 134 L 133

[Close]

BLAST of Cmc11g0295001 vs. ExPASy TrEMBL
Match: A0A5A7VGK2 (Retrovirus-related pol polyprotein from transposon tnt 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001820 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 9.8e-89
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MLVYGAKDLYTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAEYVAA 60
           MLVYGAKDLYTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAEYVAA
Sbjct: 1   MLVYGAKDLYTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAEYVAA 60

Query: 61  CETAKEEVWLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKYHLIR 120
           CETAKEEVWLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKYHLIR
Sbjct: 61  CETAKEEVWLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKYHLIR 120

Query: 121 EIVQRGDVIITKIALKHNIADPFTKTLTAKVFESHLESLGLRDMYIR 168
           EIVQRGDVIITKIALKHNIADPFTKTLTAKVFESHLESLGLRDMYIR
Sbjct: 121 EIVQRGDVIITKIALKHNIADPFTKTLTAKVFESHLESLGLRDMYIR 167

[Close]

BLAST of Cmc11g0295001 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.3e-77
Identity = 150/171 (87.72%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1    MLVYGAKDL----YTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAE 60
            MLVYGAKDL    YTDSD Q DKDSRKSTS SVFT+NGGAVVWRSIKQGC IAD+TMEAE
Sbjct: 1066 MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC-IADSTMEAE 1125

Query: 61   YVAACETAKEEVWLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKY 120
            YVAACE AKE VWLRKFLHDL+V+PNMNLPITLYCDNSGA+ANSKE RSHKR KHIERKY
Sbjct: 1126 YVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKY 1185

Query: 121  HLIREIVQRGDVIITKIALKHNIADPFTKTLTAKVFESHLESLGLRDMYIR 168
            HLIREIVQRGDVI+TKIA +HNIADPFTKTLTAKVFE HLESLGLRDMYIR
Sbjct: 1186 HLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc11g0295001 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.3e-77
Identity = 150/171 (87.72%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1    MLVYGAKDL----YTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAE 60
            MLVYGAKDL    YTDSD Q DKDSRKSTS SVFT+NGGAVVWRSIKQGC IAD+TMEAE
Sbjct: 940  MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC-IADSTMEAE 999

Query: 61   YVAACETAKEEVWLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKY 120
            YVAACE AKE VWLRKFLHDL+V+PNMNLPITLYCDNSGA+ANSKE RSHKR KHIERKY
Sbjct: 1000 YVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKY 1059

Query: 121  HLIREIVQRGDVIITKIALKHNIADPFTKTLTAKVFESHLESLGLRDMYIR 168
            HLIREIVQRGDVI+TKIA +HNIADPFTKTLTAKVFE HLESLGLRDMYIR
Sbjct: 1060 HLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1109

[Close]

BLAST of Cmc11g0295001 vs. ExPASy TrEMBL
Match: A0A5A7TKM4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G00470 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.3e-77
Identity = 150/171 (87.72%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1   MLVYGAKDL----YTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAE 60
           MLVYGAKDL    YTDSD Q DKDSRKSTS SVFT+NGGAVVWRSIKQGC IAD+TMEAE
Sbjct: 131 MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC-IADSTMEAE 190

Query: 61  YVAACETAKEEVWLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKY 120
           YVAACE AKE VWLRKFLHDL+V+PNMNLPITLYCDNSGA+ANSKE RSHKR KHIERKY
Sbjct: 191 YVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKY 250

Query: 121 HLIREIVQRGDVIITKIALKHNIADPFTKTLTAKVFESHLESLGLRDMYIR 168
           HLIREIVQRGDVI+TKIA +HNIADPFTKTLTAKVFE HLESLGLRDMYIR
Sbjct: 251 HLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300

[Close]

BLAST of Cmc11g0295001 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.1e-76
Identity = 148/171 (86.55%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1    MLVYGAKDL----YTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAE 60
            MLVYGAKDL    YT+SD Q DKDSRKSTS SVFT+NGGAVVWRSIKQGC IAD+TMEAE
Sbjct: 1066 MLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGC-IADSTMEAE 1125

Query: 61   YVAACETAKEEVWLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKY 120
            YVAACE AKE VWL+KFLHDL+V+PNMNLPITLYCDNSGA+ANSKE RSHKR KHIERKY
Sbjct: 1126 YVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKY 1185

Query: 121  HLIREIVQRGDVIITKIALKHNIADPFTKTLTAKVFESHLESLGLRDMYIR 168
            HLIREIVQRGDVI+TKIA +HNIADPFTKTLTAKVFE HLESLGLRDMYIR
Sbjct: 1186 HLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc11g0295001 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 69.3 bits (168), Expect = 3.3e-12
Identity = 38/113 (33.63%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 9   LYTDSDIQIDKDSRKSTSESVFTVNGGAVVWRSIKQGCIIADTTMEAEYVAACETAKEEV 68
           +++D+  Q  KD+R+ST+     +    + W+S KQ  +++ ++ EAEY A      E +
Sbjct: 444 VFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ-VVSKSSAEAEYRALSFATDEMM 503

Query: 69  WLRKFLHDLQVIPNMNLPITLYCDNSGAIANSKETRSHKREKHIERKYHLIRE 122
           WL +F  +LQ+   ++ P  L+CDN+ AI  +     H+R KHIE   H +RE
Sbjct: 504 WLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

The following BLAST results are available for this feature:

BLAST of Cmc11g0295001 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067492.1	2.0e-88	100.00	retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. m...	[more]
KAA0042496.1	4.7e-77	87.72	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0025945.1	4.7e-77	87.72	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	4.7e-77	87.72	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	2.3e-76	86.55	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0295001 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.9e-25	42.11	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.5e-17	35.95	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P0CV72	1.2e-06	47.54	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Cmc11g0295001 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VGK2	9.8e-89	100.00	Retrovirus-related pol polyprotein from transposon tnt 1-94 OS=Cucumis melo var....	[more]
A0A5A7TZD0	2.3e-77	87.72	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	2.3e-77	87.72	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7TKM4	2.3e-77	87.72	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G0047...	[more]
A0A5A7T2V9	1.1e-76	86.55	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]

BLAST of Cmc11g0295001 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.3e-12	33.63	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF273	RIBOSOME BIOGENESIS PROTEIN BOP1 HOMOLOG	coord: 32..124
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 32..124
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 10..150 e-value: 1.04691E-57 score: 174.964

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0295001.1	Cmc11g0295001.1	mRNA