Cmc11g0294941 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0294941
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr11: 11915424 .. 11915977 (+)
RNA-Seq Expression	Cmc11g0294941
Synteny	Cmc11g0294941

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACAGGAGCAATACATAAAGAAAGTACTTGAACGTTTCAAGATGAGTCAACCAAAATCAGTTAGTTCTCCTTTACCTAGTCACTTCAATCTGAGCAGTAAACATGACCCTTCTATAGATAAAGAGAAGGAAGATATGAGTAAGATCATGTATGCTTCAGCAGTTTGGAGCTTAATACACGCCATGGTATGTACTAGATTTGATATTTCTCATGTTGTTGGTGTTAGTCGTTTTATATCTAATCTAAGAAAAAACAACGTTGGAAGGCCGTCAAGTGCATCATGAGATATTTAAGAGGTACTTCTAGTTTGAAGCTCACATTTAGGAATGAAAAGTCAGTACTTGCCAGTTATACTGATTTAGATATCGCAAGGGACTTAGATAGTAGAAAGTTTACTTCTGGTTACTTGAAGACATTTATAGGTGGAGTAATGTCTAAATTGGCAATCAAGGTTTTGCATAAATGTGTTGCACTTTCTACAACTAAAGCAGAGTATATTGCAACAGGAGAAGCATGTAAAGAGATCTTGTGGATGAAATGCTTTATATAG

mRNA sequence

ATGTCACAGGAGCAATACATAAAGAAAGTACTTGAACGTTTCAAGATGAGTCAACCAAAATCAGTTAGTTCTCCTTTACCTAGTCACTTCAATCTGAGCAGTAAACATGACCCTTCTATAGATAAAGAGAAGGAAGATATGAGTAAGATCATGTATGCTTCAGCAGTTTGGAGCTTAATACACGCCATGAAAAAACAACGTTGGAAGGCCGTCAAGTGCATCATGAGATATTTAAGAGGTACTTCTAGTTTGAAGCTCACATTTAGGAATGAAAAGTCAGTACTTGCCAGTTATACTGATTTAGATATCGCAAGGGACTTAGATAGTAGAAAGTTTACTTCTGGTTACTTGAAGACATTTATAGGTGGAGTAATGTCTAAATTGGCAATCAAGGTTTTGCATAAATGTGTTGCACTTTCTACAACTAAAGCAGAGTATATTGCAACAGGAGAAGCATGTAAAGAGATCTTGTGGATGAAATGCTTTATATAG

Coding sequence (CDS)

ATGTCACAGGAGCAATACATAAAGAAAGTACTTGAACGTTTCAAGATGAGTCAACCAAAATCAGTTAGTTCTCCTTTACCTAGTCACTTCAATCTGAGCAGTAAACATGACCCTTCTATAGATAAAGAGAAGGAAGATATGAGTAAGATCATGTATGCTTCAGCAGTTTGGAGCTTAATACACGCCATGAAAAAACAACGTTGGAAGGCCGTCAAGTGCATCATGAGATATTTAAGAGGTACTTCTAGTTTGAAGCTCACATTTAGGAATGAAAAGTCAGTACTTGCCAGTTATACTGATTTAGATATCGCAAGGGACTTAGATAGTAGAAAGTTTACTTCTGGTTACTTGAAGACATTTATAGGTGGAGTAATGTCTAAATTGGCAATCAAGGTTTTGCATAAATGTGTTGCACTTTCTACAACTAAAGCAGAGTATATTGCAACAGGAGAAGCATGTAAAGAGATCTTGTGGATGAAATGCTTTATATAG

Protein sequence

MSQEQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLIHAMKKQRWKAVKCIMRYLRGTSSLKLTFRNEKSVLASYTDLDIARDLDSRKFTSGYLKTFIGGVMSKLAIKVLHKCVALSTTKAEYIATGEACKEILWMKCFI

Homology

[Close]

BLAST of Cmc11g0294941 vs. NCBI nr
Match: KAA0067485.1 (Integrase, catalytic core [Cucumis melo var. makuwa])

HSP 1 Score: 230.7 bits (587), Expect = 8.9e-57
Identity = 123/131 (93.89%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 3   QEQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLIHA 62
           +EQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLIHA
Sbjct: 64  KEQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLIHA 123

Query: 63  MKKQRWKAVKCIMRYLRGTSSLKLTFRNEKSVLASYTDLDIARDLDSRKFTSGYLKTFIG 122
           M      AVKCIMRYLRGTSSLKLTFRNEKSVLASYTDLDIARDLDSRKFTSGYLKTFIG
Sbjct: 124 M------AVKCIMRYLRGTSSLKLTFRNEKSVLASYTDLDIARDLDSRKFTSGYLKTFIG 183

Query: 123 GVMSKLAIKVL 134
           GVMSKLAIK L
Sbjct: 184 GVMSKLAIKEL 188

[Close]

BLAST of Cmc11g0294941 vs. NCBI nr
Match: RVW22327.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 193.0 bits (489), Expect = 2.1e-45
Identity = 107/184 (58.15%), Postives = 128/184 (69.57%), Query Frame = 0


Query: 1    MSQEQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLI 60
            M QEQYI+KVL RF MS+ K VSSPL SHF LSS+H PS DKEKEDM ++ YASAV SL+
Sbjct: 913  MLQEQYIEKVLARFNMSKAKVVSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAVGSLM 972

Query: 61   HAM---------------------KKQRWKAVKCIMRYLRGTSSLKLTFRNEKSVLASYT 120
            +AM                     ++  W+AVK IMRYLRGTS LKLTF + K +L  YT
Sbjct: 973  YAMVCTRPDIAYAVGVVSRFLSNPRRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYT 1032

Query: 121  DLDIARDLDSRKFTSGYLKTFIGGVMSKLAIKVLHKCVALSTTKAEYIATGEACKEILWM 164
            D D+A D+D+R+ TSGYL TF GG +S  +   L KCVALSTT+AEYIA  EACKE+LWM
Sbjct: 1033 DSDMAGDVDNRRSTSGYLMTFSGGAVSWQS--RLQKCVALSTTEAEYIAAAEACKELLWM 1092

[Close]

BLAST of Cmc11g0294941 vs. NCBI nr
Match: RVW24680.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 191.4 bits (485), Expect = 6.0e-45
Identity = 107/184 (58.15%), Postives = 127/184 (69.02%), Query Frame = 0


Query: 1    MSQEQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLI 60
            M QEQYI+KVL RF MS+ K VSSPL SHF LSS+H PS DKEKEDM ++ YASAV SL+
Sbjct: 947  MLQEQYIEKVLARFNMSKAKVVSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAVGSLM 1006

Query: 61   HAM---------------------KKQRWKAVKCIMRYLRGTSSLKLTFRNEKSVLASYT 120
            +AM                      +  W+AVK IMRYLRGTS LKLTF + K +L  YT
Sbjct: 1007 YAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYT 1066

Query: 121  DLDIARDLDSRKFTSGYLKTFIGGVMSKLAIKVLHKCVALSTTKAEYIATGEACKEILWM 164
            D D+A D+D+R+ TSGYL TF GG +S  +   L KCVALSTT+AEYIA  EACKE+LWM
Sbjct: 1067 DSDMAGDVDNRRSTSGYLMTFSGGAVSWQS--RLQKCVALSTTEAEYIAAAEACKELLWM 1126

[Close]

BLAST of Cmc11g0294941 vs. NCBI nr
Match: RVW24009.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-44
Identity = 106/184 (57.61%), Postives = 126/184 (68.48%), Query Frame = 0


Query: 1   MSQEQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLI 60
           M QEQYI+KVL RF M + K VSSPL SHF LSS+H PS DKEKEDM ++ YASAV SL+
Sbjct: 307 MLQEQYIEKVLARFNMGKAKVVSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAVGSLM 366

Query: 61  HAM---------------------KKQRWKAVKCIMRYLRGTSSLKLTFRNEKSVLASYT 120
           +AM                      +  W+AVK IMRYLRGTS LKLTF + K +L  YT
Sbjct: 367 YAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYT 426

Query: 121 DLDIARDLDSRKFTSGYLKTFIGGVMSKLAIKVLHKCVALSTTKAEYIATGEACKEILWM 164
           D D+A D+D+R+ TSGYL TF GG +S  +   L KCVALSTT+AEYIA  EACKE+LWM
Sbjct: 427 DSDMAGDVDNRRSTSGYLMTFSGGAVSWQS--RLQKCVALSTTEAEYIAAAEACKELLWM 486

[Close]

BLAST of Cmc11g0294941 vs. NCBI nr
Match: RVW85908.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 188.3 bits (477), Expect = 5.1e-44
Identity = 105/184 (57.07%), Postives = 125/184 (67.93%), Query Frame = 0


Query: 1    MSQEQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLI 60
            M QEQYI+KVL RF MS+ K VSSPL SHF LSS+H PS DKEKEDM ++ YASAV SL+
Sbjct: 1056 MLQEQYIEKVLARFNMSKAKVVSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAVGSLM 1115

Query: 61   HAM---------------------KKQRWKAVKCIMRYLRGTSSLKLTFRNEKSVLASYT 120
            + M                      +  W+AVK IMRYLRGTS LKLTF + K +L  YT
Sbjct: 1116 YVMVCTRPDIAYSVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYT 1175

Query: 121  DLDIARDLDSRKFTSGYLKTFIGGVMSKLAIKVLHKCVALSTTKAEYIATGEACKEILWM 164
            D D+A D+D+R+ TSGYL TF GG +S  +   L KCV LSTT+AEYIA  EACKE+LWM
Sbjct: 1176 DSDMAGDVDNRRSTSGYLTTFSGGAVSWQS--RLQKCVVLSTTEAEYIAAAEACKELLWM 1235

[Close]

BLAST of Cmc11g0294941 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-33
Identity = 85/184 (46.20%), Postives = 115/184 (62.50%), Query Frame = 0


Query: 1    MSQEQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLI 60
            +SQE+YI++VLERF M   K VS+PL  H  LS K  P+  +EK +M+K+ Y+SAV SL+
Sbjct: 1060 LSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLM 1119

Query: 61   HAM---------------------KKQRWKAVKCIMRYLRGTSSLKLTFRNEKSVLASYT 120
            +AM                      K+ W+AVK I+RYLRGT+   L F     +L  YT
Sbjct: 1120 YAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYT 1179

Query: 121  DLDIARDLDSRKFTSGYLKTFIGGVMSKLAIKVLHKCVALSTTKAEYIATGEACKEILWM 164
            D D+A D+D+RK ++GYL TF GG +S  +   L KCVALSTT+AEYIA  E  KE++W+
Sbjct: 1180 DADMAGDIDNRKSSTGYLFTFSGGAISWQS--KLQKCVALSTTEAEYIAATETGKEMIWL 1239

[Close]

BLAST of Cmc11g0294941 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-11
Identity = 60/179 (33.52%), Postives = 92/179 (51.40%), Query Frame = 0


Query: 1    MSQEQYIKKVLERFKMSQPKSVSSPLPSHFN---LSSKHDPSIDKEKEDMSKIMY----- 60
            +SQ  Y+KK+L +F M    +VS+PLPS  N   L+S  D +    +  +  +MY     
Sbjct: 1137 LSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPC-RSLIGCLMYIMLCT 1196

Query: 61   ----ASAVWSLIHAMKK---QRWKAVKCIMRYLRGTSSLKLTFRNE---KSVLASYTDLD 120
                 +AV  L     K   + W+ +K ++RYL+GT  +KL F+     ++ +  Y D D
Sbjct: 1197 RPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSD 1256

Query: 121  IARDLDSRKFTSGYL-KTFIGGVMSKLAIKVLHKCVALSTTKAEYIATGEACKEILWMK 161
             A     RK T+GYL K F   ++     +     VA S+T+AEY+A  EA +E LW+K
Sbjct: 1257 WAGSEIDRKSTTGYLFKMFDFNLICWNTKR--QNSVAASSTEAEYMALFEAVREALWLK 1312

[Close]

BLAST of Cmc11g0294941 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-10
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 0


Query: 68  WKAVKCIMRYLRGTSSLKLTF-RNEKSVLASYTDLDIARDLDSRKFTSGYLKTFIGGVMS 127
           W+A+K ++RYL+ T +  L F R   + L  Y+D D A D++SR+ TSGYL    GG +S
Sbjct: 43  WQALKRVLRYLQSTQTYGLEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVS 102

Query: 128 KLAIKVLHKCVALSTTKAEYIATGEACKEILWM 160
             + K   + VALS+T+ EY+A  EA +E +W+
Sbjct: 103 WRSKK--QRTVALSSTEDEYMALSEATQEAVWL 133

[Close]

BLAST of Cmc11g0294941 vs. ExPASy TrEMBL
Match: A0A5A7VP97 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001700 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 4.3e-57
Identity = 123/131 (93.89%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 3   QEQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLIHA 62
           +EQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLIHA
Sbjct: 64  KEQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLIHA 123

Query: 63  MKKQRWKAVKCIMRYLRGTSSLKLTFRNEKSVLASYTDLDIARDLDSRKFTSGYLKTFIG 122
           M      AVKCIMRYLRGTSSLKLTFRNEKSVLASYTDLDIARDLDSRKFTSGYLKTFIG
Sbjct: 124 M------AVKCIMRYLRGTSSLKLTFRNEKSVLASYTDLDIARDLDSRKFTSGYLKTFIG 183

Query: 123 GVMSKLAIKVL 134
           GVMSKLAIK L
Sbjct: 184 GVMSKLAIKEL 188

[Close]

BLAST of Cmc11g0294941 vs. ExPASy TrEMBL
Match: A0A438CGI4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1683 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.0e-45
Identity = 107/184 (58.15%), Postives = 128/184 (69.57%), Query Frame = 0


Query: 1    MSQEQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLI 60
            M QEQYI+KVL RF MS+ K VSSPL SHF LSS+H PS DKEKEDM ++ YASAV SL+
Sbjct: 913  MLQEQYIEKVLARFNMSKAKVVSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAVGSLM 972

Query: 61   HAM---------------------KKQRWKAVKCIMRYLRGTSSLKLTFRNEKSVLASYT 120
            +AM                     ++  W+AVK IMRYLRGTS LKLTF + K +L  YT
Sbjct: 973  YAMVCTRPDIAYAVGVVSRFLSNPRRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYT 1032

Query: 121  DLDIARDLDSRKFTSGYLKTFIGGVMSKLAIKVLHKCVALSTTKAEYIATGEACKEILWM 164
            D D+A D+D+R+ TSGYL TF GG +S  +   L KCVALSTT+AEYIA  EACKE+LWM
Sbjct: 1033 DSDMAGDVDNRRSTSGYLMTFSGGAVSWQS--RLQKCVALSTTEAEYIAAAEACKELLWM 1092

[Close]

BLAST of Cmc11g0294941 vs. ExPASy TrEMBL
Match: A0A438CN91 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3654 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.9e-45
Identity = 107/184 (58.15%), Postives = 127/184 (69.02%), Query Frame = 0


Query: 1    MSQEQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLI 60
            M QEQYI+KVL RF MS+ K VSSPL SHF LSS+H PS DKEKEDM ++ YASAV SL+
Sbjct: 947  MLQEQYIEKVLARFNMSKAKVVSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAVGSLM 1006

Query: 61   HAM---------------------KKQRWKAVKCIMRYLRGTSSLKLTFRNEKSVLASYT 120
            +AM                      +  W+AVK IMRYLRGTS LKLTF + K +L  YT
Sbjct: 1007 YAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYT 1066

Query: 121  DLDIARDLDSRKFTSGYLKTFIGGVMSKLAIKVLHKCVALSTTKAEYIATGEACKEILWM 164
            D D+A D+D+R+ TSGYL TF GG +S  +   L KCVALSTT+AEYIA  EACKE+LWM
Sbjct: 1067 DSDMAGDVDNRRSTSGYLMTFSGGAVSWQS--RLQKCVALSTTEAEYIAAAEACKELLWM 1126

[Close]

BLAST of Cmc11g0294941 vs. ExPASy TrEMBL
Match: A0A438CLF9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2520 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 8.4e-45
Identity = 106/184 (57.61%), Postives = 126/184 (68.48%), Query Frame = 0


Query: 1   MSQEQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLI 60
           M QEQYI+KVL RF M + K VSSPL SHF LSS+H PS DKEKEDM ++ YASAV SL+
Sbjct: 307 MLQEQYIEKVLARFNMGKAKVVSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAVGSLM 366

Query: 61  HAM---------------------KKQRWKAVKCIMRYLRGTSSLKLTFRNEKSVLASYT 120
           +AM                      +  W+AVK IMRYLRGTS LKLTF + K +L  YT
Sbjct: 367 YAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYT 426

Query: 121 DLDIARDLDSRKFTSGYLKTFIGGVMSKLAIKVLHKCVALSTTKAEYIATGEACKEILWM 164
           D D+A D+D+R+ TSGYL TF GG +S  +   L KCVALSTT+AEYIA  EACKE+LWM
Sbjct: 427 DSDMAGDVDNRRSTSGYLMTFSGGAVSWQS--RLQKCVALSTTEAEYIAAAEACKELLWM 486

[Close]

BLAST of Cmc11g0294941 vs. ExPASy TrEMBL
Match: A5C9D7 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_007304 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.5e-44
Identity = 106/184 (57.61%), Postives = 126/184 (68.48%), Query Frame = 0


Query: 1    MSQEQYIKKVLERFKMSQPKSVSSPLPSHFNLSSKHDPSIDKEKEDMSKIMYASAVWSLI 60
            M QEQYI+KV  RF MS+ K VSSPL SHF LSS+H PS DKEKEDM ++ YASA+ SL+
Sbjct: 1031 MLQEQYIEKVFARFNMSKFKVVSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAIGSLM 1090

Query: 61   HAM---------------------KKQRWKAVKCIMRYLRGTSSLKLTFRNEKSVLASYT 120
            +AM                      +  W+AVK IMRYLRGTS LKLTF + K +L  YT
Sbjct: 1091 YAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYT 1150

Query: 121  DLDIARDLDSRKFTSGYLKTFIGGVMSKLAIKVLHKCVALSTTKAEYIATGEACKEILWM 164
            D D+A D+D+RK TSGYL TF GG +S  +   L KCVALSTT+AEYIA  EACKE+LWM
Sbjct: 1151 DSDMAGDVDNRKSTSGYLMTFSGGAVSWQS--RLQKCVALSTTEAEYIAAVEACKELLWM 1210

The following BLAST results are available for this feature:

BLAST of Cmc11g0294941 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067485.1	8.9e-57	93.89	Integrase, catalytic core [Cucumis melo var. makuwa]	[more]
RVW22327.1	2.1e-45	58.15	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW24680.1	6.0e-45	58.15	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW24009.1	1.7e-44	57.61	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW85908.1	5.1e-44	57.07	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]

BLAST of Cmc11g0294941 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.1e-33	46.20	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	4.5e-11	33.52	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P0CV72	1.7e-10	41.94	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Cmc11g0294941 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VP97	4.3e-57	93.89	Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A438CGI4	1.0e-45	58.15	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A438CN91	2.9e-45	58.15	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A438CLF9	8.4e-45	57.61	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A5C9D7	2.5e-44	57.61	Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI...	[more]

BLAST of Cmc11g0294941 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..34

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0294941.1	Cmc11g0294941.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding