Cmc11g0294931 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0294931
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 11908210 .. 11909721 (-)
RNA-Seq Expression	Cmc11g0294931
Synteny	Cmc11g0294931

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTACCCTGACGTTTTCCCAGACGAACTCCCAGGACTTCTGCCTCCCAGAGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAAGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTATTGTTCTTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAAAACCGCTACCCCTTTCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGATATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACGAGTTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACATGGTGTTTAAGGATTTTCTAGACTCGTTCGTCATAGTCTTCATTGATGACATCTTGATTTACTCTAAACTTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGGAGACTCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTGGACCCAGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTAGAGCCCAGCATGCGAGAGTAGCTTTCAGGAGCTCAAGCAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGGTCGGGAAACTTTGTGATCTATAGCGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATTCATGAGCAGAACTACCCTGCCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGATGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATCCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCTTACTCAGGGATTTTTAGAGGGCCGAGATTGCAGTCTCAGTAG

mRNA sequence

ATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTACCCTGACGTTTTCCCAGACGAACTCCCAGGACTTCTGCCTCCCAGAGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAAGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTATTGTTCTTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAAAACCGCTACCCCTTTCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGATATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACGAGTTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACATGGTGTTTAAGGATTTTCTAGACTCGTTCGTCATAGTCTTCATTGATGACATCTTGATTTACTCTAAACTTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGGAGACTCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTGGACCCAGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACGGAGCTCAAGCAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGGTCGGGAAACTTTGTGATCTATAGCGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATTCATGAGCAGAACTACCCTGCCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGATGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATCCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCTTACTCAGGGATTTTTAGAGGGCCGAGATTGCAGTCTCAGTAG

Coding sequence (CDS)

ATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTACCCTGACGTTTTCCCAGACGAACTCCCAGGACTTCTGCCTCCCAGAGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAAGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTATTGTTCTTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAAAACCGCTACCCCTTTCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGATATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACGAGTTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACATGGTGTTTAAGGATTTTCTAGACTCGTTCGTCATAGTCTTCATTGATGACATCTTGATTTACTCTAAACTTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGGAGACTCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTGGACCCAGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACGGAGCTCAAGCAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGGTCGGGAAACTTTGTGATCTATAGCGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATTCATGAGCAGAACTACCCTGCCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGATGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATCCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCTTACTCAGGGATTTTTAGAGGGCCGAGATTGCAGTCTCAGTAG

Protein sequence

MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLLPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFLKKKDGSMRLCIDYRELNKVTVKNRYPFPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIYSKLEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPYSGIFRGPRLQSQ

Homology

[Close]

BLAST of Cmc11g0294931 vs. NCBI nr
Match: TYK20443.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 846.7 bits (2186), Expect = 9.6e-242
Identity = 432/490 (88.16%), Postives = 434/490 (88.57%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLLPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGL PPREVDFAIEL
Sbjct: 862  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 921

Query: 61   EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFLKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+KKKDGSMRLCI
Sbjct: 922  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 981

Query: 121  DYRELNKVTVKNRYPFPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYP PRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 982  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 1041

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIYSKLEAEHEEHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMN VFKDFLDSFVIVFIDDILIYSK EAEHEEHLHQVL
Sbjct: 1042 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 1101

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST-------- 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST        
Sbjct: 1102 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 1161

Query: 301  -----------------------------------------ELKQKLVTAPVLTVPDGSG 360
                                                     ELKQKLVTAPVLTVPDGSG
Sbjct: 1162 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 1221

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLY
Sbjct: 1222 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 1281

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAH 442
            GEKIQIYTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 1282 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1341

[Close]

BLAST of Cmc11g0294931 vs. NCBI nr
Match: KAA0025998.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 846.7 bits (2186), Expect = 9.6e-242
Identity = 432/490 (88.16%), Postives = 434/490 (88.57%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLLPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGL PPREVDFAIEL
Sbjct: 526  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 585

Query: 61   EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFLKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+KKKDGSMRLCI
Sbjct: 586  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 645

Query: 121  DYRELNKVTVKNRYPFPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYP PRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 646  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 705

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIYSKLEAEHEEHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMN VFKDFLDSFVIVFIDDILIYSK EAEHEEHLHQVL
Sbjct: 706  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 765

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST-------- 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST        
Sbjct: 766  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 825

Query: 301  -----------------------------------------ELKQKLVTAPVLTVPDGSG 360
                                                     ELKQKLVTAPVLTVPDGSG
Sbjct: 826  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 885

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLY
Sbjct: 886  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 945

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAH 442
            GEKIQIYTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 946  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1005

[Close]

BLAST of Cmc11g0294931 vs. NCBI nr
Match: TYK01576.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 846.7 bits (2186), Expect = 9.6e-242
Identity = 432/490 (88.16%), Postives = 434/490 (88.57%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLLPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGL PPREVDFAIEL
Sbjct: 863  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 922

Query: 61   EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFLKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+KKKDGSMRLCI
Sbjct: 923  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 982

Query: 121  DYRELNKVTVKNRYPFPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYP PRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 983  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 1042

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIYSKLEAEHEEHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMN VFKDFLDSFVIVFIDDILIYSK EAEHEEHLHQVL
Sbjct: 1043 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 1102

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST-------- 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST        
Sbjct: 1103 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 1162

Query: 301  -----------------------------------------ELKQKLVTAPVLTVPDGSG 360
                                                     ELKQKLVTAPVLTVPDGSG
Sbjct: 1163 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 1222

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLY
Sbjct: 1223 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 1282

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAH 442
            GEKIQIYTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 1283 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1342

[Close]

BLAST of Cmc11g0294931 vs. NCBI nr
Match: TYK06888.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 846.7 bits (2186), Expect = 9.6e-242
Identity = 432/490 (88.16%), Postives = 434/490 (88.57%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLLPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGL PPREVDFAIEL
Sbjct: 481 MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 540

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFLKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+KKKDGSMRLCI
Sbjct: 541 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 600

Query: 121 DYRELNKVTVKNRYPFPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
           DYRELNKVTVKNRYP PRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 601 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 660

Query: 181 GHYEFVVMSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIYSKLEAEHEEHLHQVL 240
           GHYEFVVMSFGLTNAPAVFMDLMN VFKDFLDSFVIVFIDDILIYSK EAEHEEHLHQVL
Sbjct: 661 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 720

Query: 241 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST-------- 300
           ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST        
Sbjct: 721 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 780

Query: 301 -----------------------------------------ELKQKLVTAPVLTVPDGSG 360
                                                    ELKQKLVTAPVLTVPDGSG
Sbjct: 781 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 840

Query: 361 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLY 420
           NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLY
Sbjct: 841 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 900

Query: 421 GEKIQIYTDHKSLKYFFTQKELNMRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAH 442
           GEKIQIYTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 901 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 960

[Close]

BLAST of Cmc11g0294931 vs. NCBI nr
Match: KAA0062342.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 846.7 bits (2186), Expect = 9.6e-242
Identity = 432/490 (88.16%), Postives = 434/490 (88.57%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLLPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGL PPREVDFAIEL
Sbjct: 909  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 968

Query: 61   EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFLKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+KKKDGSMRLCI
Sbjct: 969  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 1028

Query: 121  DYRELNKVTVKNRYPFPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYP PRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 1029 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 1088

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIYSKLEAEHEEHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMN VFKDFLDSFVIVFIDDILIYSK EAEHEEHLHQVL
Sbjct: 1089 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 1148

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST-------- 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST        
Sbjct: 1149 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 1208

Query: 301  -----------------------------------------ELKQKLVTAPVLTVPDGSG 360
                                                     ELKQKLVTAPVLTVPDGSG
Sbjct: 1209 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 1268

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLY
Sbjct: 1269 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 1328

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAH 442
            GEKIQIYTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 1329 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1388

[Close]

BLAST of Cmc11g0294931 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 4.5e-69
Identity = 148/427 (34.66%), Postives = 230/427 (53.86%), Query Frame = 0


Query: 72  YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFL-KKKDGS----MRLCIDYRELN 131
           Y    A  +E++ Q+Q++L++G IR S SP+ +P+  + KK+D S     R+ IDYR+LN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 132 KVTVKNRYPFPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFV 191
           ++TV +R+P P +D++  +L     F+ IDL  G+HQ+ +    + KTAF +++GHYE++
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332

Query: 192 VMSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIYSKLEAEHEEHLHQVLETLRAN 251
            M FGL NAPA F   MN + +  L+   +V++DDI+++S    EH + L  V E L   
Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392

Query: 252 KLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPS--------------- 311
            L  +  KCEF  ++ TFLGHV++ +G+  +P KIEA+  +P P+               
Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

Query: 312 -----------------------------------TELKQKLVTAPVLTVPDGSGNFVIY 371
                                               +LK  +   P+L VPD +  F + 
Sbjct: 453 RKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLT 512

Query: 372 SDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQ 431
           +DAS   LG VL Q G  ++Y SR L  HE NY   + EL A+V+A K +RHYL G   +
Sbjct: 513 TDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFE 572

Query: 432 IYTDHKSLKYFFTQKELNMRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALI 444
           I +DH+ L + +  K+ N +  RW   + ++D +I Y  GK N VADALSR +      +
Sbjct: 573 ISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR-IKLEETYL 632

[Close]

BLAST of Cmc11g0294931 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 259.2 bits (661), Expect = 8.5e-68
Identity = 167/497 (33.60%), Postives = 247/497 (49.70%), Query Frame = 0


Query: 2    KASKLLSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELPGLLPPR 61
            +AS L   G +  + S +   EP  +  S           + ++Y ++  ++    LPPR
Sbjct: 520  EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRND----LPPR 579

Query: 62   EVDF-------AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAP 121
              D         IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +P
Sbjct: 580  PADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSP 639

Query: 122  VLFLKKKDGSMRLCIDYRELNKVTVKNRYPFPRIDDLFDQLQGATVFSKIDLRSGYHQLR 181
            V+ + KKDG+ RLC+DYR LNK T+ + +P PRID+L  ++  A +F+ +DL SGYHQ+ 
Sbjct: 640  VVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIP 699

Query: 182  IRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIY 241
            +   D  KTAF +  G YE+ VM FGL NAP+ F   M   F+D    FV V++DDILI+
Sbjct: 700  MEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIF 759

Query: 242  SKLEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVT 301
            S+   EH +HL  VLE L+   L  K  KC+F   +  FLG+ +  + ++    K  A+ 
Sbjct: 760  SESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIR 819

Query: 302  NWPRPST-----------------------------------------------ELKQKL 361
            ++P P T                                               +LK  L
Sbjct: 820  DFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQDKAIDKLKDAL 879

Query: 362  VTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKIHEQNYPAH 421
              +PVL   +   N+ + +DASK G+G VL +         VV Y S+ L+  ++NYPA 
Sbjct: 880  CNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAG 939

Query: 422  DLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQMRWLELVKDYDCEIL 430
            +LEL  ++ AL  +R+ L+G+   + TDH SL     + E   R  RWL+ +  YD  + 
Sbjct: 940  ELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLE 999

[Close]

BLAST of Cmc11g0294931 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 258.5 bits (659), Expect = 1.5e-67
Identity = 166/497 (33.40%), Postives = 247/497 (49.70%), Query Frame = 0


Query: 2    KASKLLSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELPGLLPPR 61
            +AS L   G +  + S +   EP  +  S           + ++Y ++  ++    LPPR
Sbjct: 546  EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRND----LPPR 605

Query: 62   EVDF-------AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAP 121
              D         IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +P
Sbjct: 606  PADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSP 665

Query: 122  VLFLKKKDGSMRLCIDYRELNKVTVKNRYPFPRIDDLFDQLQGATVFSKIDLRSGYHQLR 181
            V+ + KKDG+ RLC+DYR LNK T+ + +P PRID+L  ++  A +F+ +DL SGYHQ+ 
Sbjct: 666  VVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIP 725

Query: 182  IRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIY 241
            +   D  KTAF +  G YE+ VM FGL NAP+ F   M   F+D    FV V++DDILI+
Sbjct: 726  MEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIF 785

Query: 242  SKLEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVT 301
            S+   EH +HL  VLE L+   L  K  KC+F   +  FLG+ +  + ++    K  A+ 
Sbjct: 786  SESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIR 845

Query: 302  NWPRPST-----------------------------------------------ELKQKL 361
            ++P P T                                               +LK  L
Sbjct: 846  DFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQDKAIEKLKAAL 905

Query: 362  VTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKIHEQNYPAH 421
              +PVL   +   N+ + +DASK G+G VL +         VV Y S+ L+  ++NYPA 
Sbjct: 906  CNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAG 965

Query: 422  DLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQMRWLELVKDYDCEIL 430
            +LEL  ++ AL  +R+ L+G+   + TDH SL     + E   R  RWL+ +  YD  + 
Sbjct: 966  ELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLE 1025

[Close]

BLAST of Cmc11g0294931 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.9e-67
Identity = 143/418 (34.21%), Postives = 219/418 (52.39%), Query Frame = 0


Query: 65  APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFLKKKD-----GSMRLC 124
           +PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   + KK         R+ 
Sbjct: 205 SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVV 264

Query: 125 IDYRELNKVTVKNRYPFPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSR 184
           IDYR+LN++T+ +RYP P +D++  +L     F+ IDL  G+HQ+ + +  I KTAF ++
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324

Query: 185 YGHYEFVVMSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIYSKLEAEHEEHLHQV 244
            GHYE++ M FGL NAPA F   MN + +  L+   +V++DDI+I+S    EH   +  V
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLV 384

Query: 245 LETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTE------ 304
              L    L  +  KCEF  ++  FLGH+V+ +G+  +P K++A+ ++P P+ +      
Sbjct: 385 FTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAF 444

Query: 305 --------------------------------------------LKQKLVTAPVLTVPDG 364
                                                       LK  ++  P+L +PD 
Sbjct: 445 LGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDF 504

Query: 365 SGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHY 424
              FV+ +DAS   LG VL Q G  +++ SR L  HE NY A + EL A+V+A K +RHY
Sbjct: 505 EKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHY 564

Query: 425 LYGEKIQIYTDHKSLKYFFTQKELNMRQMRWLELVKDYDCEILYHPGKANVVADALSR 428
           L G +  I +DH+ L++    KE   +  RW   + +Y  +I Y  GK N VADALSR
Sbjct: 565 LLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]

BLAST of Cmc11g0294931 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 8.3e-63
Identity = 150/469 (31.98%), Postives = 241/469 (51.39%), Query Frame = 0


Query: 21  IREPEVSLSSEPVVREYPDVFPDELPGLLPP--REVDFAIELEPGTAPISRAPYRMAPAE 80
           ++EPE+      + +E+ D+  +     LP   + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 81  LKELKVQLQELLDKGFIRPSVSPWGAPVLFLKKKDGSMRLCIDYRELNKVTVKNRYPFPR 140
           ++ +  ++ + L  G IR S +    PV+F+ KK+G++R+ +DY+ LNK    N YP P 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 141 IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 200
           I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 201 FMDLMNMVFKDFLDSFVIVFIDDILIYSKLEAEHEEHLHQVLETLRANKLYAKFSKCEFW 260
           F   +N +  +  +S V+ ++DDILI+SK E+EH +H+  VL+ L+   L    +KCEF 
Sbjct: 549 FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 261 LRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST-------------------------- 320
             +V F+G+ +S +G +     I+ V  W +P                            
Sbjct: 609 QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 321 -----------------------ELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLM 380
                                   +KQ LV+ PVL   D S   ++ +DAS   +G VL 
Sbjct: 669 PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 728

Query: 381 QQGK-----VVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYG--EKIQIYTDHK 430
           Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH+
Sbjct: 729 QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 788

[Close]

BLAST of Cmc11g0294931 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 4.6e-242
Identity = 432/490 (88.16%), Postives = 434/490 (88.57%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLLPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGL PPREVDFAIEL
Sbjct: 498 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 557

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFLKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+KKKDGSMRLCI
Sbjct: 558 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 617

Query: 121 DYRELNKVTVKNRYPFPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
           DYRELNKVTVKNRYP P+IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 618 DYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 677

Query: 181 GHYEFVVMSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIYSKLEAEHEEHLHQVL 240
           GHYEFVVMSFGLTNAPAVFMDLMN VFKDFLDSFVIVFIDDILIYSK EAEHEEHLHQVL
Sbjct: 678 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 737

Query: 241 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST-------- 300
           ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST        
Sbjct: 738 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 797

Query: 301 -----------------------------------------ELKQKLVTAPVLTVPDGSG 360
                                                    ELKQKLV APVLTVPDGSG
Sbjct: 798 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPDGSG 857

Query: 361 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLY 420
           NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLY
Sbjct: 858 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 917

Query: 421 GEKIQIYTDHKSLKYFFTQKELNMRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAH 442
           GEKIQIYTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 918 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 977

[Close]

BLAST of Cmc11g0294931 vs. ExPASy TrEMBL
Match: A0A5D3BTN0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001560 PE=4 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 4.6e-242
Identity = 432/490 (88.16%), Postives = 434/490 (88.57%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLLPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGL PPREVDFAIEL
Sbjct: 863  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 922

Query: 61   EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFLKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+KKKDGSMRLCI
Sbjct: 923  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 982

Query: 121  DYRELNKVTVKNRYPFPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYP PRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 983  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 1042

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIYSKLEAEHEEHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMN VFKDFLDSFVIVFIDDILIYSK EAEHEEHLHQVL
Sbjct: 1043 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 1102

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST-------- 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST        
Sbjct: 1103 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 1162

Query: 301  -----------------------------------------ELKQKLVTAPVLTVPDGSG 360
                                                     ELKQKLVTAPVLTVPDGSG
Sbjct: 1163 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 1222

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLY
Sbjct: 1223 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 1282

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAH 442
            GEKIQIYTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 1283 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1342

[Close]

BLAST of Cmc11g0294931 vs. ExPASy TrEMBL
Match: A0A5A7T7M0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G00720 PE=4 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 4.6e-242
Identity = 432/490 (88.16%), Postives = 434/490 (88.57%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLLPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGL PPREVDFAIEL
Sbjct: 393 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 452

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFLKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+KKKDGSMRLCI
Sbjct: 453 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 512

Query: 121 DYRELNKVTVKNRYPFPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
           DYRELNKVTVKNRYP PRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 513 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 572

Query: 181 GHYEFVVMSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIYSKLEAEHEEHLHQVL 240
           GHYEFVVMSFGLT APAVFMDLMN +FKDFLDSFVIVFIDDILIYSK EAEHEEHLHQVL
Sbjct: 573 GHYEFVVMSFGLTKAPAVFMDLMNRLFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 632

Query: 241 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST-------- 300
           ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST        
Sbjct: 633 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 692

Query: 301 -----------------------------------------ELKQKLVTAPVLTVPDGSG 360
                                                    ELKQKLVTAPVLTVPDGSG
Sbjct: 693 GLAGYYRRFVEDFSRIANPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 752

Query: 361 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLY 420
           NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLY
Sbjct: 753 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 812

Query: 421 GEKIQIYTDHKSLKYFFTQKELNMRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAH 442
           GEKIQIYTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 813 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 872

[Close]

BLAST of Cmc11g0294931 vs. ExPASy TrEMBL
Match: A0A5A7SIJ5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003210 PE=4 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 4.6e-242
Identity = 432/490 (88.16%), Postives = 434/490 (88.57%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLLPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGL PPREVDFAIEL
Sbjct: 526  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 585

Query: 61   EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFLKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+KKKDGSMRLCI
Sbjct: 586  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 645

Query: 121  DYRELNKVTVKNRYPFPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYP PRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 646  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 705

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIYSKLEAEHEEHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMN VFKDFLDSFVIVFIDDILIYSK EAEHEEHLHQVL
Sbjct: 706  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 765

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST-------- 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPST        
Sbjct: 766  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 825

Query: 301  -----------------------------------------ELKQKLVTAPVLTVPDGSG 360
                                                     ELKQKLVTAPVLTVPDGSG
Sbjct: 826  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 885

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLY
Sbjct: 886  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 945

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAH 442
            GEKIQIYTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 946  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1005

[Close]

BLAST of Cmc11g0294931 vs. ExPASy TrEMBL
Match: A0A5A7UHL7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G004390 PE=4 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 4.6e-242
Identity = 432/490 (88.16%), Postives = 434/490 (88.57%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLLPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLLPPREVDFAIEL
Sbjct: 495 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLLPPREVDFAIEL 554

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFLKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+K+KDGSM LCI
Sbjct: 555 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKEKDGSMCLCI 614

Query: 121 DYRELNKVTVKNRYPFPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
           DYRELNKVTVKNRYP PRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKT FRSRY
Sbjct: 615 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTTFRSRY 674

Query: 181 GHYEFVVMSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIYSKLEAEHEEHLHQVL 240
           GHYEFVVMSFGLTNAPAVFMDLMN VFKDFLDSFVIVFIDDILIYSK EAEHEEHLHQVL
Sbjct: 675 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 734

Query: 241 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST-------- 300
           ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST        
Sbjct: 735 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 794

Query: 301 -----------------------------------------ELKQKLVTAPVLTVPDGSG 360
                                                    ELKQKLVTAPVLTVPDGSG
Sbjct: 795 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 854

Query: 361 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLY 420
           NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLY
Sbjct: 855 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 914

Query: 421 GEKIQIYTDHKSLKYFFTQKELNMRQMRWLELVKDYDCEILYHPGKANVVADALSRKVAH 442
           GEKIQIYTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 915 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 974

[Close]

BLAST of Cmc11g0294931 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 7.1e-09
Identity = 29/65 (44.62%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 235 HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRP-- 294
           HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 295 STELK 296
           +TEL+
Sbjct: 63  TTELR 67

The following BLAST results are available for this feature:

BLAST of Cmc11g0294931 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK20443.1	9.6e-242	88.16	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025998.1	9.6e-242	88.16	pol protein [Cucumis melo var. makuwa]	[more]
TYK01576.1	9.6e-242	88.16	pol protein [Cucumis melo var. makuwa]	[more]
TYK06888.1	9.6e-242	88.16	pol protein [Cucumis melo var. makuwa]	[more]
KAA0062342.1	9.6e-242	88.16	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0294931 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	4.5e-69	34.66	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q99315	8.5e-68	33.60	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.5e-67	33.40	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P20825	1.9e-67	34.21	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P0CT41	8.3e-63	31.98	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Cmc11g0294931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4E4	4.6e-242	88.16	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]
A0A5D3BTN0	4.6e-242	88.16	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7T7M0	4.6e-242	88.16	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27...	[more]
A0A5A7SIJ5	4.6e-242	88.16	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34...	[more]
A0A5A7UHL7	4.6e-242	88.16	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24...	[more]

BLAST of Cmc11g0294931 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	7.1e-09	44.62	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 110..268 e-value: 2.2E-26 score: 92.7
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 90..269 score: 9.511086
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 311..407 e-value: 7.4E-34 score: 116.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 134..269 e-value: 1.5E-92 score: 310.7
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 55..194 e-value: 1.5E-92 score: 310.7
None	No IPR available	GENE3D	3.10.20.370		coord: 308..378 e-value: 3.1E-8 score: 35.5
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 292..409 coord: 66..292
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 292..409 coord: 66..292
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 314..429 e-value: 2.68044E-60 score: 190.782
None	No IPR available	CDD	cd01647	RT_LTR	coord: 93..269 e-value: 4.99363E-97 score: 287.184
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 33..413

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0294931.1	Cmc11g0294931.1	mRNA