Cmc11g0293931 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0293931
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 10356887 .. 10358743 (-)
RNA-Seq Expression	Cmc11g0293931
Synteny	Cmc11g0293931

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCGAATGTAGTGGCTGATGCGCTAAGTAGGAAAGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGACTTTGAGAGGGCAGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGACAGTCCAGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAATGATCCTTATCTGGCAGAGAAGCGTCGCGTGGTAGAGACAGAGCAAGGTGAAGGCTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAAGGACGCCTCTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTGGCAGACTTTGTCAGTAGATGCTTGGTGTGCCAGCAGGTGAAGGCACATAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACGGTGATCTGGGTCGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGCTATATATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGTACAAGGTTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTAGAAGACATGCTGCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTACAGACGACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCCCAGAGCAGACAGAAGAGTTACGCTGATGTACGACGTAAGGACCTCGAGTTTAAAGTGGGAGATATGGTCTTTCTGAAGGTAGTGCCTATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGCCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCGTTTGCTGCAGTGCACGACGTATTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCAACACATGTGGTGGACTTCGAGCCACTGCAGGTTAGCGAGAACCTGAGCTACGAGGAGCAGCCTGTCGAGGTCCTGGCAAGGGAGGTCAAGAAGCTTCGCAGTCGAGAAATCCCACTGGTTAAAATCCTTTGGCAAAACCATGGAGTGGAAGAGGCAACGTGGGAGAAAGAAGAGGATATGAGAGCCCAGCACCCCGAGCTGTTCGAGGATTAG

mRNA sequence

ATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCGAATGTAGTGGCTGATGCGCTAAGTAGGAAAGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGACTTTGAGAGGGCAGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGACAGTCCAGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAATGATCCTTATCTGGCAGAGAAGCGTCGCGTGGTAGAGACAGAGCAAGGTGAAGGCTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAAGGACGCCTCTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTGGCAGACTTTGTCAGTAGATGCTTGGTGTGCCAGCAGGTGAAGGCACATAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACGGTGATCTGGGTCGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGCTATATATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGTACAAGGTTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTAGAAGACATGCTGCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTACAGACGACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCCCAGAGCAGACAGAAGAGTTACGCTGATGTACGACGTAAGGACCTCGAGTTTAAAGTGGGAGATATGGTCTTTCTGAAGGTAGTGCCTATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGCCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCGTTTGCTGCAGTGCACGACGTATTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCAACACATGTGGTGGACTTCGAGCCACTGCAGGTTAGCGAGAACCTGAGCTACGAGGAGCAGCCTGTCGAGGTCCTGGCAAGGGAGGTCAAGAAGCTTCGCAGTCGAGAAATCCCACTGGTTAAAATCCTTTGGCAAAACCATGGAGTGGAAGAGGCAACGTGGGAGAAAGAAGAGGATATGAGAGCCCAGCACCCCGAGCTGTTCGAGGATTAG

Coding sequence (CDS)

ATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCGAATGTAGTGGCTGATGCGCTAAGTAGGAAAGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGACTTTGAGAGGGCAGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGACAGTCCAGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAATGATCCTTATCTGGCAGAGAAGCGTCGCGTGGTAGAGACAGAGCAAGGTGAAGGCTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAAGGACGCCTCTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTGGCAGACTTTGTCAGTAGATGCTTGGTGTGCCAGCAGGTGAAGGCACATAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACGGTGATCTGGGTCGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGCTATATATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGTACAAGGTTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTAGAAGACATGCTGCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTACAGACGACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCCCAGAGCAGACAGAAGAGTTACGCTGATGTACGACGTAAGGACCTCGAGTTTAAAGTGGGAGATATGGTCTTTCTGAAGGTAGTGCCTATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGCCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCGTTTGCTGCAGTGCACGACGTATTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCAACACATGTGGTGGACTTCGAGCCACTGCAGGTTAGCGAGAACCTGAGCTACGAGGAGCAGCCTGTCGAGGTCCTGGCAAGGGAGGTCAAGAAGCTTCGCAGTCGAGAAATCCCACTGGTTAAAATCCTTTGGCAAAACCATGGAGTGGAAGAGGCAACGTGGGAGAAAGAAGAGGATATGAGAGCCCAGCACCCCGAGCTGTTCGAGGATTAG

Protein sequence

MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVGDMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQHPELFED

Homology

[Close]

BLAST of Cmc11g0293931 vs. NCBI nr
Match: KAA0031437.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1239.2 bits (3205), Expect = 0.0e+00
Identity = 613/618 (99.19%), Postives = 616/618 (99.68%), Query Frame = 0


Query: 1    MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 60
            MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Sbjct: 858  MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 917

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER
Sbjct: 918  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 977

Query: 121  AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGL 180
            AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGL
Sbjct: 978  AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGL 1037

Query: 181  MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 240
            MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC
Sbjct: 1038 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 1097

Query: 241  LVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 300
            LVCQQVKA RQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH
Sbjct: 1098 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 1157

Query: 301  FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 360
            FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA
Sbjct: 1158 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 1217

Query: 361  FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 420
            FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
Sbjct: 1218 FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 1277

Query: 421  KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVG 480
            KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VG
Sbjct: 1278 KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVG 1337

Query: 481  DMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 540
            DMVFLKV PMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM
Sbjct: 1338 DMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 1397

Query: 541  LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 600
            LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA
Sbjct: 1398 LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 1457

Query: 601  TWEKEEDMRAQHPELFED 619
            TWEKEEDMRAQ+PELFED
Sbjct: 1458 TWEKEEDMRAQYPELFED 1475

[Close]

BLAST of Cmc11g0293931 vs. NCBI nr
Match: KAA0033825.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1239.2 bits (3205), Expect = 0.0e+00
Identity = 613/618 (99.19%), Postives = 616/618 (99.68%), Query Frame = 0


Query: 1    MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 60
            MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Sbjct: 1522 MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 1581

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER
Sbjct: 1582 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 1641

Query: 121  AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGL 180
            AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGL
Sbjct: 1642 AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGL 1701

Query: 181  MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 240
            MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC
Sbjct: 1702 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 1761

Query: 241  LVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 300
            LVCQQVKA RQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH
Sbjct: 1762 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 1821

Query: 301  FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 360
            FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA
Sbjct: 1822 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 1881

Query: 361  FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 420
            FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
Sbjct: 1882 FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 1941

Query: 421  KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVG 480
            KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VG
Sbjct: 1942 KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVG 2001

Query: 481  DMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 540
            DMVFLKV PMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM
Sbjct: 2002 DMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 2061

Query: 541  LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 600
            LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA
Sbjct: 2062 LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 2121

Query: 601  TWEKEEDMRAQHPELFED 619
            TWEKEEDMRAQ+PELFED
Sbjct: 2122 TWEKEEDMRAQYPELFED 2139

[Close]

BLAST of Cmc11g0293931 vs. NCBI nr
Match: KAA0025848.1 (pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo var. makuwa] >KAA0036593.1 pol protein [Cucumis melo var. makuwa] >KAA0036739.1 pol protein [Cucumis melo var. makuwa] >KAA0037408.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1239.2 bits (3205), Expect = 0.0e+00
Identity = 613/618 (99.19%), Postives = 616/618 (99.68%), Query Frame = 0


Query: 1    MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 60
            MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Sbjct: 917  MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 976

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER
Sbjct: 977  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 1036

Query: 121  AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGL 180
            AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGL
Sbjct: 1037 AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGL 1096

Query: 181  MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 240
            MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC
Sbjct: 1097 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 1156

Query: 241  LVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 300
            LVCQQVKA RQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH
Sbjct: 1157 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 1216

Query: 301  FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 360
            FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA
Sbjct: 1217 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 1276

Query: 361  FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 420
            FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
Sbjct: 1277 FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 1336

Query: 421  KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVG 480
            KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VG
Sbjct: 1337 KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVG 1396

Query: 481  DMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 540
            DMVFLKV PMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM
Sbjct: 1397 DMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 1456

Query: 541  LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 600
            LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA
Sbjct: 1457 LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 1516

Query: 601  TWEKEEDMRAQHPELFED 619
            TWEKEEDMRAQ+PELFED
Sbjct: 1517 TWEKEEDMRAQYPELFED 1534

[Close]

BLAST of Cmc11g0293931 vs. NCBI nr
Match: TYK28422.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1239.2 bits (3205), Expect = 0.0e+00
Identity = 613/618 (99.19%), Postives = 616/618 (99.68%), Query Frame = 0


Query: 1    MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 60
            MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Sbjct: 1268 MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 1327

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER
Sbjct: 1328 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 1387

Query: 121  AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGL 180
            AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGL
Sbjct: 1388 AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGL 1447

Query: 181  MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 240
            MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC
Sbjct: 1448 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 1507

Query: 241  LVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 300
            LVCQQVKA RQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH
Sbjct: 1508 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 1567

Query: 301  FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 360
            FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA
Sbjct: 1568 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 1627

Query: 361  FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 420
            FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
Sbjct: 1628 FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 1687

Query: 421  KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVG 480
            KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VG
Sbjct: 1688 KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVG 1747

Query: 481  DMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 540
            DMVFLKV PMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM
Sbjct: 1748 DMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 1807

Query: 541  LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 600
            LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA
Sbjct: 1808 LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 1867

Query: 601  TWEKEEDMRAQHPELFED 619
            TWEKEEDMRAQ+PELFED
Sbjct: 1868 TWEKEEDMRAQYPELFED 1885

[Close]

BLAST of Cmc11g0293931 vs. NCBI nr
Match: TYK28368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1239.2 bits (3205), Expect = 0.0e+00
Identity = 613/618 (99.19%), Postives = 616/618 (99.68%), Query Frame = 0


Query: 1    MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 60
            MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Sbjct: 1256 MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 1315

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER
Sbjct: 1316 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 1375

Query: 121  AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGL 180
            AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGL
Sbjct: 1376 AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGL 1435

Query: 181  MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 240
            MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC
Sbjct: 1436 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 1495

Query: 241  LVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 300
            LVCQQVKA RQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH
Sbjct: 1496 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 1555

Query: 301  FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 360
            FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA
Sbjct: 1556 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 1615

Query: 361  FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 420
            FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
Sbjct: 1616 FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 1675

Query: 421  KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVG 480
            KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VG
Sbjct: 1676 KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVG 1735

Query: 481  DMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 540
            DMVFLKV PMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM
Sbjct: 1736 DMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 1795

Query: 541  LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 600
            LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA
Sbjct: 1796 LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 1855

Query: 601  TWEKEEDMRAQHPELFED 619
            TWEKEEDMRAQ+PELFED
Sbjct: 1856 TWEKEEDMRAQYPELFED 1873

[Close]

BLAST of Cmc11g0293931 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-71
Identity = 177/551 (32.12%), Postives = 278/551 (50.45%), Query Frame = 0


Query: 7    VAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE 66
            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE 126
               N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQ-GEGFSISS 186
            I          + Q+++    + +++    ND  L      E +RV E  Q  +G  I+S
Sbjct: 855  INF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 914

Query: 187  DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADF 246
             D      ++ +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + ++
Sbjct: 915  KD------QILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEY 974

Query: 247  VSRCLVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLT 306
            V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +
Sbjct: 975  VQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFS 1034

Query: 307  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLD 366
            K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + 
Sbjct: 1035 KMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1094

Query: 367  FSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE 426
            FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE
Sbjct: 1095 FSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFE 1154

Query: 427  ALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL 486
             ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++
Sbjct: 1155 IVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEI 1214

Query: 487  -EFKVGDMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-H 545
             EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S   +  
Sbjct: 1215 EEFQPGDLVMVKRT-KTGFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFS 1257

[Close]

BLAST of Cmc11g0293931 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-71
Identity = 177/551 (32.12%), Postives = 278/551 (50.45%), Query Frame = 0


Query: 7    VAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE 66
            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE 126
               N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQ-GEGFSISS 186
            I          + Q+++    + +++    ND  L      E +RV E  Q  +G  I+S
Sbjct: 855  INF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 914

Query: 187  DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADF 246
             D      ++ +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + ++
Sbjct: 915  KD------QILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEY 974

Query: 247  VSRCLVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLT 306
            V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +
Sbjct: 975  VQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFS 1034

Query: 307  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLD 366
            K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + 
Sbjct: 1035 KMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1094

Query: 367  FSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE 426
            FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE
Sbjct: 1095 FSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFE 1154

Query: 427  ALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL 486
             ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++
Sbjct: 1155 IVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEI 1214

Query: 487  -EFKVGDMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-H 545
             EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S   +  
Sbjct: 1215 EEFQPGDLVMVKRT-KTGFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFS 1257

[Close]

BLAST of Cmc11g0293931 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-71
Identity = 177/551 (32.12%), Postives = 278/551 (50.45%), Query Frame = 0


Query: 7    VAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE 66
            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE 126
               N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQ-GEGFSISS 186
            I          + Q+++    + +++    ND  L      E +RV E  Q  +G  I+S
Sbjct: 855  INF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 914

Query: 187  DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADF 246
             D      ++ +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + ++
Sbjct: 915  KD------QILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEY 974

Query: 247  VSRCLVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLT 306
            V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +
Sbjct: 975  VQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFS 1034

Query: 307  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLD 366
            K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + 
Sbjct: 1035 KMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1094

Query: 367  FSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE 426
            FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE
Sbjct: 1095 FSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFE 1154

Query: 427  ALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL 486
             ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++
Sbjct: 1155 IVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEI 1214

Query: 487  -EFKVGDMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-H 545
             EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S   +  
Sbjct: 1215 EEFQPGDLVMVKRT-KTGFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFS 1257

[Close]

BLAST of Cmc11g0293931 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-71
Identity = 177/551 (32.12%), Postives = 278/551 (50.45%), Query Frame = 0


Query: 7    VAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE 66
            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE 126
               N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQ-GEGFSISS 186
            I          + Q+++    + +++    ND  L      E +RV E  Q  +G  I+S
Sbjct: 855  INF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 914

Query: 187  DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADF 246
             D      ++ +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + ++
Sbjct: 915  KD------QILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEY 974

Query: 247  VSRCLVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLT 306
            V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +
Sbjct: 975  VQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFS 1034

Query: 307  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLD 366
            K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + 
Sbjct: 1035 KMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1094

Query: 367  FSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE 426
            FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE
Sbjct: 1095 FSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFE 1154

Query: 427  ALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL 486
             ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++
Sbjct: 1155 IVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEI 1214

Query: 487  -EFKVGDMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-H 545
             EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S   +  
Sbjct: 1215 EEFQPGDLVMVKRT-KTGFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFS 1257

[Close]

BLAST of Cmc11g0293931 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-71
Identity = 177/551 (32.12%), Postives = 278/551 (50.45%), Query Frame = 0


Query: 7    VAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE 66
            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE 126
               N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETEQ-GEGFSISS 186
            I          + Q+++    + +++    ND  L      E +RV E  Q  +G  I+S
Sbjct: 855  INF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 914

Query: 187  DDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADF 246
             D      ++ +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + ++
Sbjct: 915  KD------QILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEY 974

Query: 247  VSRCLVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLT 306
            V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +
Sbjct: 975  VQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFS 1034

Query: 307  KSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLD 366
            K A  VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + 
Sbjct: 1035 KMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1094

Query: 367  FSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE 426
            FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE
Sbjct: 1095 FSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFE 1154

Query: 427  ALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL 486
             ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++
Sbjct: 1155 IVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEI 1214

Query: 487  -EFKVGDMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-H 545
             EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S   +  
Sbjct: 1215 EEFQPGDLVMVKRT-KTGFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFS 1257

[Close]

BLAST of Cmc11g0293931 vs. ExPASy TrEMBL
Match: A0A5D3CQB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001420 PE=4 SV=1)

HSP 1 Score: 1239.2 bits (3205), Expect = 0.0e+00
Identity = 613/618 (99.19%), Postives = 616/618 (99.68%), Query Frame = 0


Query: 1    MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 60
            MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Sbjct: 917  MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 976

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER
Sbjct: 977  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 1036

Query: 121  AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGL 180
            AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGL
Sbjct: 1037 AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGL 1096

Query: 181  MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 240
            MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC
Sbjct: 1097 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 1156

Query: 241  LVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 300
            LVCQQVKA RQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH
Sbjct: 1157 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 1216

Query: 301  FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 360
            FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA
Sbjct: 1217 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 1276

Query: 361  FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 420
            FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
Sbjct: 1277 FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 1336

Query: 421  KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVG 480
            KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VG
Sbjct: 1337 KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVG 1396

Query: 481  DMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 540
            DMVFLKV PMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM
Sbjct: 1397 DMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 1456

Query: 541  LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 600
            LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA
Sbjct: 1457 LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 1516

Query: 601  TWEKEEDMRAQHPELFED 619
            TWEKEEDMRAQ+PELFED
Sbjct: 1517 TWEKEEDMRAQYPELFED 1534

[Close]

BLAST of Cmc11g0293931 vs. ExPASy TrEMBL
Match: A0A5A7UBS1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00110 PE=4 SV=1)

HSP 1 Score: 1239.2 bits (3205), Expect = 0.0e+00
Identity = 613/618 (99.19%), Postives = 616/618 (99.68%), Query Frame = 0


Query: 1    MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 60
            MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Sbjct: 917  MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 976

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER
Sbjct: 977  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 1036

Query: 121  AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGL 180
            AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGL
Sbjct: 1037 AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGL 1096

Query: 181  MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 240
            MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC
Sbjct: 1097 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 1156

Query: 241  LVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 300
            LVCQQVKA RQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH
Sbjct: 1157 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 1216

Query: 301  FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 360
            FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA
Sbjct: 1217 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 1276

Query: 361  FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 420
            FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
Sbjct: 1277 FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 1336

Query: 421  KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVG 480
            KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VG
Sbjct: 1337 KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVG 1396

Query: 481  DMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 540
            DMVFLKV PMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM
Sbjct: 1397 DMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 1456

Query: 541  LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 600
            LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA
Sbjct: 1457 LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 1516

Query: 601  TWEKEEDMRAQHPELFED 619
            TWEKEEDMRAQ+PELFED
Sbjct: 1517 TWEKEEDMRAQYPELFED 1534

[Close]

BLAST of Cmc11g0293931 vs. ExPASy TrEMBL
Match: A0A5A7TEQ2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00410 PE=4 SV=1)

HSP 1 Score: 1239.2 bits (3205), Expect = 0.0e+00
Identity = 613/618 (99.19%), Postives = 616/618 (99.68%), Query Frame = 0


Query: 1    MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 60
            MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Sbjct: 917  MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 976

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER
Sbjct: 977  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 1036

Query: 121  AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGL 180
            AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGL
Sbjct: 1037 AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGL 1096

Query: 181  MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 240
            MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC
Sbjct: 1097 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 1156

Query: 241  LVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 300
            LVCQQVKA RQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH
Sbjct: 1157 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 1216

Query: 301  FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 360
            FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA
Sbjct: 1217 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 1276

Query: 361  FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 420
            FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
Sbjct: 1277 FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 1336

Query: 421  KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVG 480
            KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VG
Sbjct: 1337 KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVG 1396

Query: 481  DMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 540
            DMVFLKV PMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM
Sbjct: 1397 DMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 1456

Query: 541  LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 600
            LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA
Sbjct: 1457 LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 1516

Query: 601  TWEKEEDMRAQHPELFED 619
            TWEKEEDMRAQ+PELFED
Sbjct: 1517 TWEKEEDMRAQYPELFED 1534

[Close]

BLAST of Cmc11g0293931 vs. ExPASy TrEMBL
Match: A0A5A7TSL0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001340 PE=4 SV=1)

HSP 1 Score: 1239.2 bits (3205), Expect = 0.0e+00
Identity = 613/618 (99.19%), Postives = 616/618 (99.68%), Query Frame = 0


Query: 1    MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 60
            MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Sbjct: 917  MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 976

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER
Sbjct: 977  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 1036

Query: 121  AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGL 180
            AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGL
Sbjct: 1037 AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGL 1096

Query: 181  MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 240
            MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC
Sbjct: 1097 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 1156

Query: 241  LVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 300
            LVCQQVKA RQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH
Sbjct: 1157 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 1216

Query: 301  FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 360
            FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA
Sbjct: 1217 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 1276

Query: 361  FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 420
            FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
Sbjct: 1277 FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 1336

Query: 421  KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVG 480
            KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VG
Sbjct: 1337 KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVG 1396

Query: 481  DMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 540
            DMVFLKV PMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM
Sbjct: 1397 DMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 1456

Query: 541  LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 600
            LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA
Sbjct: 1457 LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 1516

Query: 601  TWEKEEDMRAQHPELFED 619
            TWEKEEDMRAQ+PELFED
Sbjct: 1517 TWEKEEDMRAQYPELFED 1534

[Close]

BLAST of Cmc11g0293931 vs. ExPASy TrEMBL
Match: A0A5A7U2S5 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001160 PE=4 SV=1)

HSP 1 Score: 1239.2 bits (3205), Expect = 0.0e+00
Identity = 613/618 (99.19%), Postives = 616/618 (99.68%), Query Frame = 0


Query: 1   MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 60
           MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF
Sbjct: 179 MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 238

Query: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 120
           TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER
Sbjct: 239 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 298

Query: 121 AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEGFSISSDDGL 180
           AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRVVETEQGEGFSISSDDGL
Sbjct: 299 AEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGL 358

Query: 181 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 240
           MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC
Sbjct: 359 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRC 418

Query: 241 LVCQQVKAHRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 300
           LVCQQVKA RQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH
Sbjct: 419 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYTVIWVVVDRLTKSAH 478

Query: 301 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 360
           FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA
Sbjct: 479 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA 538

Query: 361 FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 420
           FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
Sbjct: 539 FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 598

Query: 421 KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFKVG 480
           KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEF+VG
Sbjct: 599 KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVG 658

Query: 481 DMVFLKVVPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 540
           DMVFLKV PMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM
Sbjct: 659 DMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISM 718

Query: 541 LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 600
           LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA
Sbjct: 719 LRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEA 778

Query: 601 TWEKEEDMRAQHPELFED 619
           TWEKEEDMRAQ+PELFED
Sbjct: 779 TWEKEEDMRAQYPELFED 796

The following BLAST results are available for this feature:

BLAST of Cmc11g0293931 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031437.1	0.0e+00	99.19	pol protein [Cucumis melo var. makuwa]	[more]
KAA0033825.1	0.0e+00	99.19	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025848.1	0.0e+00	99.19	pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo v...	[more]
TYK28422.1	0.0e+00	99.19	pol protein [Cucumis melo var. makuwa]	[more]
TYK28368.1	0.0e+00	99.19	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0293931 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.3e-71	32.12	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.3e-71	32.12	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.3e-71	32.12	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.3e-71	32.12	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.3e-71	32.12	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0293931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQB5	0.0e+00	99.19	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7UBS1	0.0e+00	99.19	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7TEQ2	0.0e+00	99.19	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19...	[more]
A0A5A7TSL0	0.0e+00	99.19	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]
A0A5A7U2S5	0.0e+00	99.19	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001160 P...	[more]

BLAST of Cmc11g0293931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 192..248 e-value: 8.2E-18 score: 64.2
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 5..79 e-value: 5.2E-26 score: 91.0
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 257..462 e-value: 3.0E-45 score: 156.0
None	No IPR available	GENE3D	1.10.340.70		coord: 157..247 e-value: 1.3E-18 score: 69.0
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 5..112 coord: 185..417
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 2..101 e-value: 1.79719E-50 score: 168.44
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 259..422 score: 18.999216
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..85
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 260..419

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0293931.1	Cmc11g0293931.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding