Cmc11g0293631 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0293631
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 9869209 .. 9869616 (+)
RNA-Seq Expression	Cmc11g0293631
Synteny	Cmc11g0293631

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATTTGTGAAAAAGAAATATGGTATCCTCAGATTATGTATTGACTGTAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCAATGACTTATTTGATCAACTAAGGGGAGCAGCATTGTTCTTTAAGATTGACTTAAGGTCAGGATACCATCAGTTGAAGGTTAGAGAATCATATATTGCTAAGACAGCATTCAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTTGGTTTAACCAATACGCCAGCGGTTTTCATGGATCTCATAAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATCGTGTTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAAGTCCATAAGGAACATCTGAGGATTGTTCTATAG

mRNA sequence

ATGCTATTTGTGAAAAAGAAATATGGTATCCTCAGATTATGTATTGACTGTAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCAATGACTTATTTGATCAACTAAGGGGAGCAGCATTGTTCTTTAAGATTGACTTAAGGTCAGGATACCATCAGTTGAAGGTTAGAGAATCATATATTGCTAAGACAGCATTCAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTTGGTTTAACCAATACGCCAGCGGTTTTCATGGATCTCATAAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATCGTGTTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAAGTCCATAAGGAACATCTGAGGATTGTTCTATAG

Coding sequence (CDS)

ATGCTATTTGTGAAAAAGAAATATGGTATCCTCAGATTATGTATTGACTGTAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCAATGACTTATTTGATCAACTAAGGGGAGCAGCATTGTTCTTTAAGATTGACTTAAGGTCAGGATACCATCAGTTGAAGGTTAGAGAATCATATATTGCTAAGACAGCATTCAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTTGGTTTAACCAATACGCCAGCGGTTTTCATGGATCTCATAAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATCGTGTTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAAGTCCATAAGGAACATCTGAGGATTGTTCTATAG

Protein sequence

MLFVKKKYGILRLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLKVRESYIAKTAFRTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREVHKEHLRIVL

Homology

[Close]

BLAST of Cmc11g0293631 vs. NCBI nr
Match: TYK04862.1 (putative retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 3.4e-62
Identity = 122/135 (90.37%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MLFVKKKYGILRLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLK 60
           +LFVKKK G LRLCIDCRQLNKVTIRNKYPLPRI+DLFDQLRG ALF KIDLRSGYHQLK
Sbjct: 29  LLFVKKKDGTLRLCIDCRQLNKVTIRNKYPLPRIDDLFDQLRGVALFSKIDLRSGYHQLK 88

Query: 61  VRESYIAKTAFRTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVY 120
           VRES IAKT FRTRYGHYEFRVMPFGLTN PA+FMDL+NRIFHQYLDQFVIVFIDDILVY
Sbjct: 89  VRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAIFMDLMNRIFHQYLDQFVIVFIDDILVY 148

Query: 121 SVDREVHKEHLRIVL 136
           SVDRE H+EHLRIVL
Sbjct: 149 SVDRESHEEHLRIVL 163

[Close]

BLAST of Cmc11g0293631 vs. NCBI nr
Match: TYK27290.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.2e-61
Identity = 123/135 (91.11%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 1   MLFVKKKYGILRLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLK 60
           +LFVKKK G LRLCID RQLNKVTIRNKYPLPRI+DLFDQLRGAALF KIDLRSGYHQLK
Sbjct: 626 VLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLK 685

Query: 61  VRESYIAKTAFRTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVY 120
           VRES IAKTAFRTRYGHYEFRVMPFGLTN PAVFMDL+NRIFH+YLDQFVIVFIDDILVY
Sbjct: 686 VRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVY 745

Query: 121 SVDREVHKEHLRIVL 136
           SVDRE H+EHLRIVL
Sbjct: 746 SVDRESHEEHLRIVL 760

[Close]

BLAST of Cmc11g0293631 vs. NCBI nr
Match: KAA0050493.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.2e-61
Identity = 123/135 (91.11%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 1   MLFVKKKYGILRLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLK 60
           +LFVKKK G LRLCID RQLNKVTIRNKYPLPRI+DLFDQLRGAALF KIDLRSGYHQLK
Sbjct: 251 VLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLK 310

Query: 61  VRESYIAKTAFRTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVY 120
           VRES IAKTAFRTRYGHYEFRVMPFGLTN PAVFMDL+NRIFH+YLDQFVIVFIDDILVY
Sbjct: 311 VRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVY 370

Query: 121 SVDREVHKEHLRIVL 136
           SVDRE H+EHLRIVL
Sbjct: 371 SVDRESHEEHLRIVL 385

[Close]

BLAST of Cmc11g0293631 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.2e-61
Identity = 123/135 (91.11%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 1   MLFVKKKYGILRLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLK 60
           +LFVKKK G LRLCID RQLNKVTIRNKYPLPRI+DLFDQLRGAALF KIDLRSGYHQLK
Sbjct: 697 VLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLK 756

Query: 61  VRESYIAKTAFRTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVY 120
           VRES IAKTAFRTRYGHYEFRVMPFGLTN PAVFMDL+NRIFH+YLDQFVIVFIDDILVY
Sbjct: 757 VRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVY 816

Query: 121 SVDREVHKEHLRIVL 136
           SVDRE H+EHLRIVL
Sbjct: 817 SVDRESHEEHLRIVL 831

[Close]

BLAST of Cmc11g0293631 vs. NCBI nr
Match: TYK06334.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.2e-61
Identity = 123/135 (91.11%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 1   MLFVKKKYGILRLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLK 60
           +LFVKKK G LRLCID RQLNKVTIRNKYPLPRI+DLFDQLRGAALF KIDLRSGYHQLK
Sbjct: 659 VLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLK 718

Query: 61  VRESYIAKTAFRTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVY 120
           VRES IAKTAFRTRYGHYEFRVMPFGLTN PAVFMDL+NRIFH+YLDQFVIVFIDDILVY
Sbjct: 719 VRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVY 778

Query: 121 SVDREVHKEHLRIVL 136
           SVDRE H+EHLRIVL
Sbjct: 779 SVDRESHEEHLRIVL 793

[Close]

BLAST of Cmc11g0293631 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-33
Identity = 68/127 (53.54%), Postives = 94/127 (74.02%), Query Frame = 0


Query: 11  LRLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLKVRESYIAKTA 70
           LR+CID R L KVTI+NKYP+PR++DLFD+L  A  F K+DLRSGY Q+++ +    KT 
Sbjct: 6   LRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKTT 65

Query: 71  FRTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVYSV---DREVH 130
             TRYG +EFRVMPFGLTN  A F +L+N + ++YLD FV+V++DD++VY++       H
Sbjct: 66  CVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDLVVYTIYSNSLHEH 125

Query: 131 KEHLRIV 135
            +HLR+V
Sbjct: 126 IKHLRVV 132

[Close]

BLAST of Cmc11g0293631 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 115.5 bits (288), Expect = 4.5e-25
Identity = 61/135 (45.19%), Postives = 83/135 (61.48%), Query Frame = 0


Query: 1   MLFVKKKYGILRLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLK 60
           ++ V KK G  RLC+D R LNK TI + +PLPRI++L  ++  A +F  +DL SGYHQ+ 
Sbjct: 636 VVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIP 695

Query: 61  VRESYIAKTAFRTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVY 120
           +      KTAF T  G YE+ VMPFGL N P+ F   +   F     +FV V++DDIL++
Sbjct: 696 MEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIF 755

Query: 121 SVDREVHKEHLRIVL 136
           S   E H +HL  VL
Sbjct: 756 SESPEEHWKHLDTVL 768

[Close]

BLAST of Cmc11g0293631 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 4.5e-25
Identity = 61/135 (45.19%), Postives = 83/135 (61.48%), Query Frame = 0


Query: 1   MLFVKKKYGILRLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLK 60
           ++ V KK G  RLC+D R LNK TI + +PLPRI++L  ++  A +F  +DL SGYHQ+ 
Sbjct: 662 VVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIP 721

Query: 61  VRESYIAKTAFRTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVY 120
           +      KTAF T  G YE+ VMPFGL N P+ F   +   F     +FV V++DDIL++
Sbjct: 722 MEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIF 781

Query: 121 SVDREVHKEHLRIVL 136
           S   E H +HL  VL
Sbjct: 782 SESPEEHWKHLDTVL 794

[Close]

BLAST of Cmc11g0293631 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.0e-24
Identity = 56/124 (45.16%), Postives = 82/124 (66.13%), Query Frame = 0


Query: 12  RLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLKVRESYIAKTAF 71
           R+ +D ++LN VTI + YP+P IN     L  A  F  +DL SG+HQ+ ++ES I KTAF
Sbjct: 179 RMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAF 238

Query: 72  RTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREVHKEHL 131
            T  G YEF  +PFGL N PA+F  +I+ I  +++ +   V+IDDI+V+S D + H ++L
Sbjct: 239 STLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNL 298

Query: 132 RIVL 136
           R+VL
Sbjct: 299 RLVL 302

[Close]

BLAST of Cmc11g0293631 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.3e-23
Identity = 49/123 (39.84%), Postives = 80/123 (65.04%), Query Frame = 0


Query: 12  RLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLKVRESYIAKTAF 71
           R+ ID R+LN++TI ++YP+P ++++  +L     F  IDL  G+HQ+++ E  I+KTAF
Sbjct: 262 RVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAF 321

Query: 72  RTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREVHKEHL 131
            T+ GHYE+  MPFGL N PA F   +N I    L++  +V++DDI+++S     H   +
Sbjct: 322 STKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSI 381

Query: 132 RIV 135
           ++V
Sbjct: 382 QLV 384

[Close]

BLAST of Cmc11g0293631 vs. ExPASy TrEMBL
Match: A0A5D3C103 (Putative retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00520 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.7e-62
Identity = 122/135 (90.37%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MLFVKKKYGILRLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLK 60
           +LFVKKK G LRLCIDCRQLNKVTIRNKYPLPRI+DLFDQLRG ALF KIDLRSGYHQLK
Sbjct: 29  LLFVKKKDGTLRLCIDCRQLNKVTIRNKYPLPRIDDLFDQLRGVALFSKIDLRSGYHQLK 88

Query: 61  VRESYIAKTAFRTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVY 120
           VRES IAKT FRTRYGHYEFRVMPFGLTN PA+FMDL+NRIFHQYLDQFVIVFIDDILVY
Sbjct: 89  VRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAIFMDLMNRIFHQYLDQFVIVFIDDILVY 148

Query: 121 SVDREVHKEHLRIVL 136
           SVDRE H+EHLRIVL
Sbjct: 149 SVDRESHEEHLRIVL 163

[Close]

BLAST of Cmc11g0293631 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61
Identity = 123/135 (91.11%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 1   MLFVKKKYGILRLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLK 60
           +LFVKKK G LRLCID RQLNKVTIRNKYPLPRI+DLFDQLRGAALF KIDLRSGYHQLK
Sbjct: 659 VLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLK 718

Query: 61  VRESYIAKTAFRTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVY 120
           VRES IAKTAFRTRYGHYEFRVMPFGLTN PAVFMDL+NRIFH+YLDQFVIVFIDDILVY
Sbjct: 719 VRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVY 778

Query: 121 SVDREVHKEHLRIVL 136
           SVDRE H+EHLRIVL
Sbjct: 779 SVDRESHEEHLRIVL 793

[Close]

BLAST of Cmc11g0293631 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61
Identity = 123/135 (91.11%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 1   MLFVKKKYGILRLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLK 60
           +LFVKKK G LRLCID RQLNKVTIRNKYPLPRI+DLFDQLRGAALF KIDLRSGYHQLK
Sbjct: 697 VLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLK 756

Query: 61  VRESYIAKTAFRTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVY 120
           VRES IAKTAFRTRYGHYEFRVMPFGLTN PAVFMDL+NRIFH+YLDQFVIVFIDDILVY
Sbjct: 757 VRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVY 816

Query: 121 SVDREVHKEHLRIVL 136
           SVDRE H+EHLRIVL
Sbjct: 817 SVDRESHEEHLRIVL 831

[Close]

BLAST of Cmc11g0293631 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61
Identity = 123/135 (91.11%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 1   MLFVKKKYGILRLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLK 60
           +LFVKKK G LRLCID RQLNKVTIRNKYPLPRI+DLFDQLRGAALF KIDLRSGYHQLK
Sbjct: 697 VLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLK 756

Query: 61  VRESYIAKTAFRTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVY 120
           VRES IAKTAFRTRYGHYEFRVMPFGLTN PAVFMDL+NRIFH+YLDQFVIVFIDDILVY
Sbjct: 757 VRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVY 816

Query: 121 SVDREVHKEHLRIVL 136
           SVDRE H+EHLRIVL
Sbjct: 817 SVDRESHEEHLRIVL 831

[Close]

BLAST of Cmc11g0293631 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61
Identity = 123/135 (91.11%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 1   MLFVKKKYGILRLCIDCRQLNKVTIRNKYPLPRINDLFDQLRGAALFFKIDLRSGYHQLK 60
           +LFVKKK G LRLCID RQLNKVTIRNKYPLPRI+DLFDQLRGAALF KIDLRSGYHQLK
Sbjct: 697 VLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLK 756

Query: 61  VRESYIAKTAFRTRYGHYEFRVMPFGLTNTPAVFMDLINRIFHQYLDQFVIVFIDDILVY 120
           VRES IAKTAFRTRYGHYEFRVMPFGLTN PAVFMDL+NRIFH+YLDQFVIVFIDDILVY
Sbjct: 757 VRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVY 816

Query: 121 SVDREVHKEHLRIVL 136
           SVDRE H+EHLRIVL
Sbjct: 817 SVDRESHEEHLRIVL 831

The following BLAST results are available for this feature:

BLAST of Cmc11g0293631 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK04862.1	3.4e-62	90.37	putative retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK27290.1	2.2e-61	91.11	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0050493.1	2.2e-61	91.11	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0035455.1	2.2e-61	91.11	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1...	[more]
TYK06334.1	2.2e-61	91.11	putative polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0293631 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31843	1.2e-33	53.54	RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1	[more]
Q99315	4.5e-25	45.19	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	4.5e-25	45.19	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q8I7P9	1.0e-24	45.16	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P20825	3.3e-23	39.84	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]

BLAST of Cmc11g0293631 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C103	1.7e-62	90.37	Putative retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5A7U2V7	1.1e-61	91.11	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BS67	1.1e-61	91.11	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50...	[more]
A0A5D3BHI1	1.1e-61	91.11	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	1.1e-61	91.11	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]

BLAST of Cmc11g0293631 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 29..135 e-value: 3.0E-53 score: 182.3
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..89 e-value: 3.0E-53 score: 182.3
None	No IPR available	PANTHER	PTHR15503:SF11	RETROTRANSPOSON GAG-LIKE PROTEIN 6	coord: 2..135
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..135 e-value: 2.09218E-60 score: 182.025
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 5..134 e-value: 3.6E-19 score: 69.2
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..135 score: 14.225856
IPR032567	LDOC1-related	PANTHER	PTHR15503	LDOC1 RELATED	coord: 2..135
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0293631.1	Cmc11g0293631.1	mRNA