Cmc11g0293141 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0293141
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	protein LAX PANICLE 2-like
Location	CMiso1.1chr11: 9275958 .. 9279313 (+)
RNA-Seq Expression	Cmc11g0293141
Synteny	Cmc11g0293141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTAGAATACGAATAAAACAAAATCACTAATGATTACACCTAATTAATTTTATATATAGAAATGCGTATTGTATTATAGAGAGAAAGTGGTGTTTTGAGATGCAGGAGGTGAGTGGGTCCATTGTAGTTCTCAAAACAAACCCTAAAATGAAAGGATATTATAGATATCCCCATTCCATTATGTTTGTTTTCCCTTATATATATTTGAGCTTTCCATAAATACATTTGGATAGCTCTGCCAAAAATGGGTTCCTCTTCTACTCAAGAGTGGCTAGAGTTGAGTTTAGGATTGAGATCCACAGAGAAGGAACATCAACAAAAAGAAGAAAAAGAAGATGAAAAAAGATCAAGACTCTACCAAGAGAAATTAGTTGTTTGTGGAACCACTTCTCATGAGGAAAGTGAGTATGTTAATTTGGATTTGAGGCTTCAAATAGGGCCTAATAATAAACGTAATTATTATAATATGGGAATAAGGGATTTTATGCTTCAACATCAAAGCAACAAAAAGCACTTCCGTAGTGATTATTCTTCAACCACCAACTCTGCTGGTTTGTGGTTCTCACTACTCTCTTCACCCAACAGGTCCAAACTTATAAACTCCTTTCTTCTTCTTTCTTTTTTCTTAATCTATCATCTTCAAAAGAAAAGCTTTGATTTTCTTTTAAAAATCAATTGTAAAGTTCTTTTTGTTATATACAACAGTTTGATTAAACTTCTTACTTCTTTATTTTGGTGTATTATGAAGTTTTTTTTAGGTCAATGTAAGATTGTTGTAATTATTATATAATTTGAATTTGAAATGTGGTAGGAAGGGAGAAGGAGCAGCACTGCCTCAGATACCCAAACCCTACATTAGAGTCAAGTAAGTGACAGCATTCTAAACACACTATCAAATCATACAAACTTTTCAAATTTCCCAGTTTTCTTGTGCACTGATCATTGTTGTTTTTATTTTCTAAACCTCTTTCTTAATTCTTAAATATTATAGAATATATATACAAACATACATATATATAAGGTGACTAATTTAATCATGTTTAATCTTTTGCACGTATTAAATATGCAAGCGTAATTATCTACATAAGTTGACTAACTCAAATGCTGATTGAAATGGTATTGAGTGGGTAAAGTATTCTTGTTTAAAAAGACACATCTTCAGAAGATTGAAATTAAATAATGATTTCTTTTCACATAAACAAACAAAACAACCAATCCATCAAAACTCAAGACTAATTAATTTTTATATCCATTTAAATTTTCCTGAAGTTTCCTAGGGAAATCAATGTAGACCATTTTCTTCTGAGATTTAATTTATAGTTAATTTTCACATGAATCTATTGAAAATTAACTCAAAATCAGCGCAATACCATTATTTTTCTTTTAAAAGTCGTCCAAAATAGTAAAATATATCGTCACGTAATTTAAAAAGTAATATGAAAAAAATAGTGAAAAATGAAAAGTTGAACAATCACTCATATATTACATTATAGCAAAGTTGTTACTATTAATTAATATAGTTCATAGCAATTTTCTCTGCTTTACATTACTGATCAAAAGAACTAGAGTTGGAGAGTATATAGTTTCTTTTTTTAAATGTGTTTTATTTTATTAAAAGAAATAATGAAGTTTGACCCAGAGGAGGAAAACTAGAGTTGATGGGATTACAAATACTAATAATAATATATTTGGTGGATGAATTTGGTCTGAAATCAAATGATGAGAGGAAGCAGTGAGTAAAGGAAAGCCTGAGTTATGGATTTTGGTGAAAAAACTGTTTAGGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCACAAAGTTGGGTCTCTCCAATCAAGCTGAGGTAACAAAACGCAAAACTTTCCCATTATTTCTTTCAAATAAACTTAAGAAAAAAGAAAAGATTATTACCCGAAAGAAAAATATTCATATTTATTTAATTGTCCAATTATAATTATCACATATGAGGATCGGCGGATCTTGAAATTCATTCAGAATTTTATTTTTAAATCATATATTATTATATATTTTATGTCAATGGTGCACTCTAAAATTTTCTTTTCATTGAAATGCCTACTCTAAAAGCTTTTTCTATTTTTTTAAAAATAAAAATAATGAAAATAATGTGAAAATAGTAATACTTGGGCACATTGTATTAAATTTTTATTAGCATGTCAATATTTTCCTCAAACTTACACATATTTATGAATTCAATATTGATATATGTTAGGTTAATTACCAATATTTTTTTTATATCATAAAAAAAATCTACAAACAAAAAATTAATCATTAAAATGTTATTGATTCAAGTATAATATAAATAATAAGGTACGTTTATTAATTTAAAAATATTAAATATTTATTTACTAATTTAAATTTATTGTTATAATCTTTTTAAAAATATTTATTAAAATCAATATTTTATTGATATTTGTGGGAAAATTGAAATTAAACCTGATCTTTTTAAACTTTCGACTGGGATCAGATGTAACATTTTCAATCACAAATGAATAGTTCTTCAAAGAAATATCTTTTGAAAATACAATATTTATCCCATCACAATTTTGTAACTAGACTGCACACAGAGAGTGAGGTGTGATACATCAAAGTATTTATCATATGAAAAATGTTTTCATATTAAAAAGAAATCATCTAGCATACTGTTGTTCAAAAGTATACATGCATGGCTTAAAAGTGATTAATTAATTCCGTGTCTATTAGTATATTTTTTAATATTCGTTCTCTCTCTAATAATTACAAAGTCAGAAGTGGTTTTGAAAAAATAAAGTAAGAGATGAAGCATGCATGAGATGTCTCAGTCAAATGTCTTAGTAAGTGAGTGAGAGTGAGTGTGTTGGGATATGATGCATGCAAAATATTGGAAATGAATCAATAAAGAAGAGATAGAGAGAGAGAGTAATGATGAATTGAGCGGTTCTTTGACTTGGTTATTTTTATTTTTATTTTTATTTTTTTTTAATTTTATTGCTTTTTAAAGTTCTGTTGGTTTTGTGAAGGTTGAATTATGGTGCATGGGAGAGAGACTGTTACATACTCAATCACTAAAGCAAGTGAGAGATGGAATTTGGCTGCCTAAGTTGGTGGAATTTGTTAATTCAAACTCAATATTATTTCATCCAGAAAATCAAACTCCGTTTTCTTCTTCTAATACTTATTTTATGTCTTTGCATTATGGAAGAGCAAGCTTCTTCTAACTAAATATATATATATGTATACATACACAATGACACCTCTTCCCCTTTGTATCTCTCTCTCTCTATTTATATTATGTATATATAAGTTAGAAGTTAGGAATTTGTTTGAACTCAAATATATGTAAATA

mRNA sequence

TCTTAGAATACGAATAAAACAAAATCACTAATGATTACACCTAATTAATTTTATATATAGAAATGCGTATTGTATTATAGAGAGAAAGTGGTGTTTTGAGATGCAGGAGGTGAGTGGGTCCATTGTAGTTCTCAAAACAAACCCTAAAATGAAAGGATATTATAGATATCCCCATTCCATTATGTTTGTTTTCCCTTATATATATTTGAGCTTTCCATAAATACATTTGGATAGCTCTGCCAAAAATGGGTTCCTCTTCTACTCAAGAGTGGCTAGAGTTGAGTTTAGGATTGAGATCCACAGAGAAGGAACATCAACAAAAAGAAGAAAAAGAAGATGAAAAAAGATCAAGACTCTACCAAGAGAAATTAGTTGTTTGTGGAACCACTTCTCATGAGGAAAGTGAGTATGTTAATTTGGATTTGAGGCTTCAAATAGGGCCTAATAATAAACGTAATTATTATAATATGGGAATAAGGGATTTTATGCTTCAACATCAAAGCAACAAAAAGCACTTCCGTAGTGATTATTCTTCAACCACCAACTCTGCTGGTTTGTGGTTCTCACTACTCTCTTCACCCAACAGGAAGGGAGAAGGAGCAGCACTGCCTCAGATACCCAAACCCTACATTAGAGTCAAGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCACAAAGTTGGGTCTCTCCAATCAAGCTGAGGTTGAATTATGGTGCATGGGAGAGAGACTGTTACATACTCAATCACTAAAGCAAGTGAGAGATGGAATTTGGCTGCCTAAGTTGGTGGAATTTGTTAATTCAAACTCAATATTATTTCATCCAGAAAATCAAACTCCGTTTTCTTCTTCTAATACTTATTTTATGTCTTTGCATTATGGAAGAGCAAGCTTCTTCTAACTAAATATATATATATGTATACATACACAATGACACCTCTTCCCCTTTGTATCTCTCTCTCTCTATTTATATTATGTATATATAAGTTAGAAGTTAGGAATTTGTTTGAACTCAAATATATGTAAATA

Coding sequence (CDS)

ATGGGTTCCTCTTCTACTCAAGAGTGGCTAGAGTTGAGTTTAGGATTGAGATCCACAGAGAAGGAACATCAACAAAAAGAAGAAAAAGAAGATGAAAAAAGATCAAGACTCTACCAAGAGAAATTAGTTGTTTGTGGAACCACTTCTCATGAGGAAAGTGAGTATGTTAATTTGGATTTGAGGCTTCAAATAGGGCCTAATAATAAACGTAATTATTATAATATGGGAATAAGGGATTTTATGCTTCAACATCAAAGCAACAAAAAGCACTTCCGTAGTGATTATTCTTCAACCACCAACTCTGCTGGTTTGTGGTTCTCACTACTCTCTTCACCCAACAGGAAGGGAGAAGGAGCAGCACTGCCTCAGATACCCAAACCCTACATTAGAGTCAAGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCACAAAGTTGGGTCTCTCCAATCAAGCTGAGGTTGAATTATGGTGCATGGGAGAGAGACTGTTACATACTCAATCACTAAAGCAAGTGAGAGATGGAATTTGGCTGCCTAAGTTGGTGGAATTTGTTAATTCAAACTCAATATTATTTCATCCAGAAAATCAAACTCCGTTTTCTTCTTCTAATACTTATTTTATGTCTTTGCATTATGGAAGAGCAAGCTTCTTCTAA

Protein sequence

MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDLRLQIGPNNKRNYYNMGIRDFMLQHQSNKKHFRSDYSSTTNSAGLWFSLLSSPNRKGEGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMGERLLHTQSLKQVRDGIWLPKLVEFVNSNSILFHPENQTPFSSSNTYFMSLHYGRASFF

Homology

[Close]

BLAST of Cmc11g0293141 vs. NCBI nr
Match: KAE8652308.1 (hypothetical protein Csa_022227 [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 2.3e-68
Identity = 144/159 (90.57%), Postives = 148/159 (93.08%), Query Frame = 0


Query: 1   MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDL 60
           MGSSSTQEWLELSLGL ST KE  QK+EKEDEKRSRLYQEKLV+CGTTSHEESEYVNLDL
Sbjct: 1   MGSSSTQEWLELSLGLGSTGKEQLQKQEKEDEKRSRLYQEKLVICGTTSHEESEYVNLDL 60

Query: 61  RLQIGPNNKRNYYNMGIRDFMLQHQSNKKHFRSDYSS-TTNSAGLWFSLLSSPNRKGEGA 120
           RLQIGPNNK NY NMGIRDFMLQHQS KKHF SDYSS  TNSAGLWFSLLSSPNRKG GA
Sbjct: 61  RLQIGPNNKSNYCNMGIRDFMLQHQSKKKHFHSDYSSIITNSAGLWFSLLSSPNRKG-GA 120

Query: 121 ALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVE 159
           ALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAE++
Sbjct: 121 ALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAELD 158

[Close]

BLAST of Cmc11g0293141 vs. NCBI nr
Match: KAG6571319.1 (Protein LAX PANICLE 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214.2 bits (544), Expect = 1.2e-51
Identity = 136/234 (58.12%), Postives = 151/234 (64.53%), Query Frame = 0


Query: 1   MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDL 60
           MGS  ++EWLELSLGLR T+K+ ++ +++EDE                  EE E  +L L
Sbjct: 1   MGSPGSKEWLELSLGLRGTKKKQEEAKKEEDE--------------MNLDEEGEGSSLSL 60

Query: 61  RLQIGPNNKRNYYNMGIRDFMLQHQSNKKHFRSDYSSTT-------------NSAGLWFS 120
           RLQIGP  K    NMGI  FM   Q+N+K     +S T              N AGLWFS
Sbjct: 61  RLQIGP--KYFDTNMGIMGFM-STQNNQKWAFHSHSLTNFPHFHGLSSPPPPNPAGLWFS 120

Query: 121 LLSSPNRKGEGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMGERLL 180
           L SSPNRKG GA LPQIPK YIRVKDEKMTVLMVKKYLLTKLGLS+QAEVELWCMGERLL
Sbjct: 121 LRSSPNRKG-GAPLPQIPKAYIRVKDEKMTVLMVKKYLLTKLGLSHQAEVELWCMGERLL 180

Query: 181 HTQSLKQVRDGIWLPKLVEFVNSNSILFHPENQTPFSSSNTYFMSLHYGRASFF 222
            TQSLKQVRDG+WLPKLVEFVNSNS L      T      TY M LHYG    F
Sbjct: 181 QTQSLKQVRDGVWLPKLVEFVNSNSSL-----STSTMFQTTYLMCLHYGTTCLF 211

[Close]

BLAST of Cmc11g0293141 vs. NCBI nr
Match: XP_022931988.1 (protein LAX PANICLE 2-like [Cucurbita moschata])

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-51
Identity = 136/234 (58.12%), Postives = 151/234 (64.53%), Query Frame = 0


Query: 1   MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDL 60
           MGS  ++EWLELSLGLR T+K+ ++ +++EDE                  EE E  +L L
Sbjct: 1   MGSPGSKEWLELSLGLRGTKKKQEEAKKEEDE--------------MNLGEEGEGSSLSL 60

Query: 61  RLQIGPNNKRNYYNMGIRDFMLQHQSNKKHFRSDYSSTT-------------NSAGLWFS 120
           RLQIGP  K    NMGI  FM   Q+N+K     +S T              N AGLWFS
Sbjct: 61  RLQIGP--KCFDTNMGIMGFM-STQNNQKWAFHSHSLTNFPHFHGLSSPPPPNPAGLWFS 120

Query: 121 LLSSPNRKGEGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMGERLL 180
           L SSPNRKG GA LPQIPK YIRVKDEKMTVLMVKKYLLTKLGLS+QAEVELWCMGERLL
Sbjct: 121 LRSSPNRKG-GAPLPQIPKAYIRVKDEKMTVLMVKKYLLTKLGLSHQAEVELWCMGERLL 180

Query: 181 HTQSLKQVRDGIWLPKLVEFVNSNSILFHPENQTPFSSSNTYFMSLHYGRASFF 222
            TQSLKQVRDG+WLPKLVEFVNSNS L      T      TY M LHYG    F
Sbjct: 181 QTQSLKQVRDGVWLPKLVEFVNSNSSL-----STSTMFQTTYLMCLHYGTTCLF 211

[Close]

BLAST of Cmc11g0293141 vs. NCBI nr
Match: XP_023890144.1 (uncharacterized protein LOC112002221 [Quercus suber])

HSP 1 Score: 143.3 bits (360), Expect = 2.5e-30
Identity = 77/143 (53.85%), Postives = 99/143 (69.23%), Query Frame = 0


Query: 75  MGIRDFMLQHQSNKKHFRSDYSSTTNSAGLWFSLLSSPNRKGEGAALPQIPKPYIRVKDE 134
           +G+ D  +   ++  H+  D S+T    G WF+L SS NR GE   LPQIPK YIRVKDE
Sbjct: 153 LGLHDCQVPVPNDSHHY--DSSTTRPHPGFWFTLRSSTNRDGE--VLPQIPKAYIRVKDE 212

Query: 135 KMTVLMVKKYLLTKLGLSNQAEVELWCMGERLLHTQSLKQVRDGIWLPKLVEFVNSNSIL 194
            +TV MVKKYL+TKLGLSN+AE+++ C+G+ LLH Q+LKQVRD +WLP+L+E VNS ++ 
Sbjct: 213 NVTVFMVKKYLVTKLGLSNEAEIDISCLGQNLLHAQTLKQVRDAVWLPRLLESVNS-TLS 272

Query: 195 FHPENQTPFSSSNTYFMSLHYGR 218
           F   N      S  Y MSLHYGR
Sbjct: 273 FEDSN----DRSTKYLMSLHYGR 286

[Close]

BLAST of Cmc11g0293141 vs. NCBI nr
Match: EOX94105.1 (RING finger protein, putative, partial [Theobroma cacao])

HSP 1 Score: 141.7 bits (356), Expect = 7.4e-30
Identity = 76/125 (60.80%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 94  DY-SSTTNSAGLWFSLLSSPNRKGEGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLS 153
           DY + T   +GLWF+L S  NR GE  ALPQIPK YIRVKDE +T+ MVKKYL+TKLGLS
Sbjct: 160 DYLAGTRPHSGLWFTLQSYTNRNGE--ALPQIPKAYIRVKDENVTIFMVKKYLVTKLGLS 219

Query: 154 NQAEVELWCMGERLLHTQSLKQVRDGIWLPKLVEFVNSNSILFHPENQTPFSSSNTYFMS 213
           N+AEV++ CMG++LLHT +LKQVRD +WLP+LVE VN  ++ F  EN +  S  N + MS
Sbjct: 220 NEAEVDISCMGQKLLHTLTLKQVRDCVWLPRLVESVNPTTVSF--ENYSHQSCVNDHLMS 279

Query: 214 LHYGR 218
           L YGR
Sbjct: 280 LQYGR 280

[Close]

BLAST of Cmc11g0293141 vs. ExPASy Swiss-Prot
Match: G3XKQ9 (Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.3e-15
Identity = 45/122 (36.89%), Postives = 73/122 (59.84%), Query Frame = 0


Query: 96  SSTTNSAGLWFSLLSSPNRKGEGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQA 155
           S+   +AG+WF L ++P  +G    LPQIP+ Y+R+KD ++TV ++ KYL+ KLGL +++
Sbjct: 279 SAVAAAAGVWFVLQAAP-LQGREPFLPQIPRSYLRIKDGRVTVRLLTKYLVNKLGLEDES 338

Query: 156 EVELWCMGERLLHTQSLKQVRDGIWLPKLVEFVNSNSILFHPENQTPFSSSNTYFMSLHY 215
           EVE+ C G +LL   +L+ VRD IW  +       +++        P +  + + M L Y
Sbjct: 339 EVEITCRGRQLLPILTLQHVRDSIWCRR-------DAVSPSAAPDIPTADHHQHIMVLQY 392

Query: 216 GR 218
           GR
Sbjct: 399 GR 392

[Close]

BLAST of Cmc11g0293141 vs. ExPASy Swiss-Prot
Match: Q94AY3 (E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.2e-12
Identity = 36/78 (46.15%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 104 LWFSLLSSPNRKGEGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMG 163
           +WFSL++S N++GE A+LPQIP  Y+R++D  + V  ++KYL+ KL L ++ EVE+ CMG
Sbjct: 310 VWFSLVASSNQEGE-ASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEVEITCMG 369

Query: 164 ERLLHTQSLKQVRDGIWL 182
           E ++ T  L  + D +WL
Sbjct: 370 EPVIPTLQLHSLVD-LWL 385

[Close]

BLAST of Cmc11g0293141 vs. ExPASy Swiss-Prot
Match: Q9M9Y4 (E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 2.1e-11
Identity = 34/80 (42.50%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 104 LWFSLLSSPNRKGEGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMG 163
           +WFSL++S +++G G +LPQIP  ++R++D   TV  ++KYL+ KL L ++ E+E+ CMG
Sbjct: 311 VWFSLVASNDQEG-GTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEIEIKCMG 370

Query: 164 ERLLHTQSLKQVRDGIWLPK 184
           E ++ T +L  + D +WL K
Sbjct: 371 EAVIPTLTLYNLVD-LWLQK 388

[Close]

BLAST of Cmc11g0293141 vs. ExPASy Swiss-Prot
Match: Q9LS86 (Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At3g23060 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.1e-07
Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 0


Query: 100 NSAGLWFSLLSSPNRKGEGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVEL 159
           N+  +WFSL  S  +  E   LP I    IRVKD  MTV  +KKYL+ KLGL ++ +VE+
Sbjct: 361 NNNPVWFSLKPSKTQNIE-MLLPPITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQVEI 420

Query: 160 WCMGERLLHTQSLKQVRDGIWLPKLVEFVNSNSILFHPENQTPF--SSSNTYFMSLHY 216
           W   E +  + +L  + D  W      +V +  +   PE Q+    SS+  + M L+Y
Sbjct: 421 WLRDEPVCSSLTLHNLVD--W------WVQTTPL---PERQSAMVGSSAAEFIMDLYY 466

[Close]

BLAST of Cmc11g0293141 vs. ExPASy TrEMBL
Match: A0A6J1F0B3 (protein LAX PANICLE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111438321 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 9.7e-52
Identity = 136/234 (58.12%), Postives = 151/234 (64.53%), Query Frame = 0


Query: 1   MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDL 60
           MGS  ++EWLELSLGLR T+K+ ++ +++EDE                  EE E  +L L
Sbjct: 1   MGSPGSKEWLELSLGLRGTKKKQEEAKKEEDE--------------MNLGEEGEGSSLSL 60

Query: 61  RLQIGPNNKRNYYNMGIRDFMLQHQSNKKHFRSDYSSTT-------------NSAGLWFS 120
           RLQIGP  K    NMGI  FM   Q+N+K     +S T              N AGLWFS
Sbjct: 61  RLQIGP--KCFDTNMGIMGFM-STQNNQKWAFHSHSLTNFPHFHGLSSPPPPNPAGLWFS 120

Query: 121 LLSSPNRKGEGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMGERLL 180
           L SSPNRKG GA LPQIPK YIRVKDEKMTVLMVKKYLLTKLGLS+QAEVELWCMGERLL
Sbjct: 121 LRSSPNRKG-GAPLPQIPKAYIRVKDEKMTVLMVKKYLLTKLGLSHQAEVELWCMGERLL 180

Query: 181 HTQSLKQVRDGIWLPKLVEFVNSNSILFHPENQTPFSSSNTYFMSLHYGRASFF 222
            TQSLKQVRDG+WLPKLVEFVNSNS L      T      TY M LHYG    F
Sbjct: 181 QTQSLKQVRDGVWLPKLVEFVNSNSSL-----STSTMFQTTYLMCLHYGTTCLF 211

[Close]

BLAST of Cmc11g0293141 vs. ExPASy TrEMBL
Match: A0A0A0LR47 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G423670 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 2.1e-46
Identity = 103/115 (89.57%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MGSSSTQEWLELSLGLRSTEKEHQQKEEKEDEKRSRLYQEKLVVCGTTSHEESEYVNLDL 60
           MGSSSTQEWLELSLGL ST KE  QK+EKEDEKRSRLYQEKLV+CGTTSHEESEYVNLDL
Sbjct: 1   MGSSSTQEWLELSLGLGSTGKEQLQKQEKEDEKRSRLYQEKLVICGTTSHEESEYVNLDL 60

Query: 61  RLQIGPNNKRNYYNMGIRDFMLQHQSNKKHFRSDYSS-TTNSAGLWFSLLSSPNR 115
           RLQIGPNNK NY NMGIRDFMLQHQS KKHF SDYSS  TNSAGLWFSLLSSPNR
Sbjct: 61  RLQIGPNNKSNYCNMGIRDFMLQHQSKKKHFHSDYSSIITNSAGLWFSLLSSPNR 115

[Close]

BLAST of Cmc11g0293141 vs. ExPASy TrEMBL
Match: A0A061DN33 (RING finger protein, putative (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_003272 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.6e-30
Identity = 76/125 (60.80%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 94  DY-SSTTNSAGLWFSLLSSPNRKGEGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLS 153
           DY + T   +GLWF+L S  NR GE  ALPQIPK YIRVKDE +T+ MVKKYL+TKLGLS
Sbjct: 160 DYLAGTRPHSGLWFTLQSYTNRNGE--ALPQIPKAYIRVKDENVTIFMVKKYLVTKLGLS 219

Query: 154 NQAEVELWCMGERLLHTQSLKQVRDGIWLPKLVEFVNSNSILFHPENQTPFSSSNTYFMS 213
           N+AEV++ CMG++LLHT +LKQVRD +WLP+LVE VN  ++ F  EN +  S  N + MS
Sbjct: 220 NEAEVDISCMGQKLLHTLTLKQVRDCVWLPRLVESVNPTTVSF--ENYSHQSCVNDHLMS 279

Query: 214 LHYGR 218
           L YGR
Sbjct: 280 LQYGR 280

[Close]

BLAST of Cmc11g0293141 vs. ExPASy TrEMBL
Match: W9R9X6 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013090 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-29
Identity = 77/130 (59.23%), Postives = 96/130 (73.85%), Query Frame = 0


Query: 98  TTNSAGLWFSLLSSPNRK-GE-GAALPQIPKPYIRVKD-EKMTVLMVKKYLLTKLGLSNQ 157
           +T  +GLWF+L SS NR+ GE G ALPQI KPYIRVK+ E +T+ MVKKYL+ KLGLSN+
Sbjct: 198 STTKSGLWFTLRSSLNRELGEKGEALPQIQKPYIRVKEYENVTIFMVKKYLVRKLGLSNE 257

Query: 158 AEVELWCMGERLLHTQSLKQVRDGIWLPKLVEFVNS-----NSILFHPENQTPFS--SSN 217
           AE+++WCMG+ L HTQ+LKQ+RDG+WLP+LVE VNS      SI F  E Q  F   S +
Sbjct: 258 AEIDIWCMGQNLKHTQTLKQIRDGVWLPRLVESVNSAAVAAASINFDDEQQRDFPSLSFS 317

[Close]

BLAST of Cmc11g0293141 vs. ExPASy TrEMBL
Match: A0A6P3ZLP7 (uncharacterized protein LOC107415739 isoform X2 OS=Ziziphus jujuba OX=326968 GN=LOC107415739 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.3e-29
Identity = 70/122 (57.38%), Postives = 91/122 (74.59%), Query Frame = 0


Query: 97  STTNSAGLWFSLLSSPNRKGE-GAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQA 156
           ST  ++GLWF+L +S NR+ E G  LPQ+PK YIRVKDE +TV MVKKYL+ KLGLSN+A
Sbjct: 202 STRPNSGLWFTLSASTNREREGGGGLPQVPKAYIRVKDENVTVSMVKKYLVRKLGLSNEA 261

Query: 157 EVELWCMGERLLHTQSLKQVRDGIWLPKLVEFVNSNSILFHPENQTPFSSSNTYFMSLHY 216
           E++++CMG++L+HTQSLKQVRDG+WLP+LVE VNS +                + +SLHY
Sbjct: 262 EIDVYCMGQKLVHTQSLKQVRDGVWLPRLVESVNSAAGADERTTADCHHILTYHLLSLHY 321

Query: 217 GR 218
           GR
Sbjct: 322 GR 323

[Close]

BLAST of Cmc11g0293141 vs. TAIR 10
Match: AT5G13250.1 (RING finger protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-15
Identity = 49/117 (41.88%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 102 AGLWFSLLSSPNRKGEGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQA-EVELW 161
           +G+WF L +S N+  E   LPQIPK Y+R+KD KMTV ++ KYL+ KL L +++ +VE+ 
Sbjct: 274 SGIWFLLQASQNQTVE-PFLPQIPKSYLRIKDGKMTVRLLMKYLVNKLRLEHESQQVEIR 333

Query: 162 CMGERLLHTQSLKQVRDGIWLPKLVEFVNSNSILFHPENQTPFSSSNTYFMSLHYGR 218
           C G+ L    +L+ VRD IW           S L       P SS++ + M LHYGR
Sbjct: 334 CRGQELEPVLTLQHVRDAIWRGS-----RDTSSLSQNITLLPNSSTSDHLMVLHYGR 384

[Close]

BLAST of Cmc11g0293141 vs. TAIR 10
Match: AT2G30580.1 (DREB2A-interacting protein 2 )

HSP 1 Score: 73.2 bits (178), Expect = 3.0e-13
Identity = 36/78 (46.15%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 104 LWFSLLSSPNRKGEGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMG 163
           +WFSL++S N++GE A+LPQIP  Y+R++D  + V  ++KYL+ KL L ++ EVE+ CMG
Sbjct: 310 VWFSLVASSNQEGE-ASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEVEITCMG 369

Query: 164 ERLLHTQSLKQVRDGIWL 182
           E ++ T  L  + D +WL
Sbjct: 370 EPVIPTLQLHSLVD-LWL 385

[Close]

BLAST of Cmc11g0293141 vs. TAIR 10
Match: AT1G06770.1 (DREB2A-interacting protein 1 )

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12
Identity = 34/80 (42.50%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 104 LWFSLLSSPNRKGEGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMG 163
           +WFSL++S +++G G +LPQIP  ++R++D   TV  ++KYL+ KL L ++ E+E+ CMG
Sbjct: 311 VWFSLVASNDQEG-GTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEIEIKCMG 370

Query: 164 ERLLHTQSLKQVRDGIWLPK 184
           E ++ T +L  + D +WL K
Sbjct: 371 EAVIPTLTLYNLVD-LWLQK 388

[Close]

BLAST of Cmc11g0293141 vs. TAIR 10
Match: AT1G06770.2 (DREB2A-interacting protein 1 )

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12
Identity = 34/80 (42.50%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 104 LWFSLLSSPNRKGEGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMG 163
           +WFSL++S +++G G +LPQIP  ++R++D   TV  ++KYL+ KL L ++ E+E+ CMG
Sbjct: 197 VWFSLVASNDQEG-GTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEIEIKCMG 256

Query: 164 ERLLHTQSLKQVRDGIWLPK 184
           E ++ T +L  + D +WL K
Sbjct: 257 EAVIPTLTLYNLVD-LWLQK 274

[Close]

BLAST of Cmc11g0293141 vs. TAIR 10
Match: AT3G23060.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 6.5e-08
Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 0


Query: 100 NSAGLWFSLLSSPNRKGEGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVEL 159
           N+  +WFSL  S  +  E   LP I    IRVKD  MTV  +KKYL+ KLGL ++ +VE+
Sbjct: 361 NNNPVWFSLKPSKTQNIE-MLLPPITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQVEI 420

Query: 160 WCMGERLLHTQSLKQVRDGIWLPKLVEFVNSNSILFHPENQTPF--SSSNTYFMSLHY 216
           W   E +  + +L  + D  W      +V +  +   PE Q+    SS+  + M L+Y
Sbjct: 421 WLRDEPVCSSLTLHNLVD--W------WVQTTPL---PERQSAMVGSSAAEFIMDLYY 466

The following BLAST results are available for this feature:

BLAST of Cmc11g0293141 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652308.1	2.3e-68	90.57	hypothetical protein Csa_022227 [Cucumis sativus]	[more]
KAG6571319.1	1.2e-51	58.12	Protein LAX PANICLE 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022931988.1	2.0e-51	58.12	protein LAX PANICLE 2-like [Cucurbita moschata]	[more]
XP_023890144.1	2.5e-30	53.85	uncharacterized protein LOC112002221 [Quercus suber]	[more]
EOX94105.1	7.4e-30	60.80	RING finger protein, putative, partial [Theobroma cacao]	[more]

BLAST of Cmc11g0293141 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
G3XKQ9	5.3e-15	36.89	Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1	[more]
Q94AY3	4.2e-12	46.15	E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 ...	[more]
Q9M9Y4	2.1e-11	42.50	E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 ...	[more]
Q9LS86	9.1e-07	35.59	Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At...	[more]

BLAST of Cmc11g0293141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F0B3	9.7e-52	58.12	protein LAX PANICLE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111438321 PE=4 SV...	[more]
A0A0A0LR47	2.1e-46	89.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G423670 PE=4 SV=1	[more]
A0A061DN33	3.6e-30	60.80	RING finger protein, putative (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_00327...	[more]
W9R9X6	1.4e-29	59.23	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013090 PE=4 SV=1	[more]
A0A6P3ZLP7	2.3e-29	57.38	uncharacterized protein LOC107415739 isoform X2 OS=Ziziphus jujuba OX=326968 GN=...	[more]

BLAST of Cmc11g0293141 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13250.1	1.9e-15	41.88	RING finger protein	[more]
AT2G30580.1	3.0e-13	46.15	DREB2A-interacting protein 2	[more]
AT1G06770.1	1.5e-12	42.50	DREB2A-interacting protein 1	[more]
AT1G06770.2	1.5e-12	42.50	DREB2A-interacting protein 1	[more]
AT3G23060.1	6.5e-08	35.59	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 16..36
None	No IPR available	GENE3D	3.10.20.90		coord: 5..185 e-value: 4.4E-9 score: 38.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..35
None	No IPR available	PANTHER	PTHR47290:SF6	SUBFAMILY NOT NAMED	coord: 11..219
IPR044171	Protein LAX PANICLE 2-like	PANTHER	PTHR47290	RING FINGER PROTEIN	coord: 11..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0293141.1	Cmc11g0293141.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development