Cmc11g0293021 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0293021
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Very-long-chain 3-oxoacyl-CoA synthase
Location	CMiso1.1chr11: 9088226 .. 9088705 (-)
RNA-Seq Expression	Cmc11g0293021
Synteny	Cmc11g0293021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTACCTTATTCTATCAACTCTCCAAATGAACCATCCCATTTTTCTCAACTTTGCATGGATTGAAGGCCAGACCTTTGGATCATCACCTTTCTTCCTCATTTTCACAATCTTCTCTTACCTTTCCTTTACCTTCCTTCTTTCCCATATTTCCATTCCTCCAATATCCCCTTCAATCCTCAAACCAATCTCAGGCCTTCATAACTTTACCCTCCTCATCCTCTCCTTCATCATGGCCATTGGATCAATTCTCTCTTCCATTTATCATGTCCCTCACCCTCTTTTCCTTATTTGCTTCCCACCTCAAACCCCACCAACTGGACCTCTCTTCTTTTGGGCTTACATTTTTTATCTCTCTAAAATTCATGAATTTCTTGATACTCTCTTGATCATTCTAAGTAAATCATATCAAAGGGCTCACATTTCTCCATCTTTACCACCATTCAATGGTCTTGATCATGTCTTATCTTTGGCTTAA

mRNA sequence

ATGAGTTACCTTATTCTATCAACTCTCCAAATGAACCATCCCATTTTTCTCAACTTTGCATGGATTGAAGGCCAGACCTTTGGATCATCACCTTTCTTCCTCATTTTCACAATCTTCTCTTACCTTTCCTTTACCTTCCTTCTTTCCCATATTTCCATTCCTCCAATATCCCCTTCAATCCTCAAACCAATCTCAGGCCTTCATAACTTTACCCTCCTCATCCTCTCCTTCATCATGGCCATTGGATCAATTCTCTCTTCCATTTATCATGTCCCTCACCCTCTTTTCCTTATTTGCTTCCCACCTCAAACCCCACCAACTGGACCTCTCTTCTTTTGGGCTTACATTTTTTATCTCTCTAAAATTCATGAATTTCTTGATACTCTCTTGATCATTCTAAGTAAATCATATCAAAGGGCTCACATTTCTCCATCTTTACCACCATTCAATGGTCTTGATCATGTCTTATCTTTGGCTTAA

Coding sequence (CDS)

ATGAGTTACCTTATTCTATCAACTCTCCAAATGAACCATCCCATTTTTCTCAACTTTGCATGGATTGAAGGCCAGACCTTTGGATCATCACCTTTCTTCCTCATTTTCACAATCTTCTCTTACCTTTCCTTTACCTTCCTTCTTTCCCATATTTCCATTCCTCCAATATCCCCTTCAATCCTCAAACCAATCTCAGGCCTTCATAACTTTACCCTCCTCATCCTCTCCTTCATCATGGCCATTGGATCAATTCTCTCTTCCATTTATCATGTCCCTCACCCTCTTTTCCTTATTTGCTTCCCACCTCAAACCCCACCAACTGGACCTCTCTTCTTTTGGGCTTACATTTTTTATCTCTCTAAAATTCATGAATTTCTTGATACTCTCTTGATCATTCTAAGTAAATCATATCAAAGGGCTCACATTTCTCCATCTTTACCACCATTCAATGGTCTTGATCATGTCTTATCTTTGGCTTAA

Protein sequence

MSYLILSTLQMNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSILKPISGLHNFTLLILSFIMAIGSILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIFYLSKIHEFLDTLLIILSKSYQRAHISPSLPPFNGLDHVLSLA

Homology

[Close]

BLAST of Cmc11g0293021 vs. NCBI nr
Match: XP_008455969.2 (PREDICTED: elongation of fatty acids protein 3-like [Cucumis melo])

HSP 1 Score: 274.2 bits (700), Expect = 6.9e-70
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MSYLILSTLQMNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSI 60
           MSYLILSTLQMNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSI
Sbjct: 1   MSYLILSTLQMNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSI 60

Query: 61  LKPISGLHNFTLLILSFIMAIGSILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIFYLS 120
           LKPISGLHNFTLLILSFIMAIGSILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIFYLS
Sbjct: 61  LKPISGLHNFTLLILSFIMAIGSILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIFYLS 120

Query: 121 KIHEFLDTLLIILSKSYQR 140
           KIHEFLDTLLIILSKSYQR
Sbjct: 121 KIHEFLDTLLIILSKSYQR 139

[Close]

BLAST of Cmc11g0293021 vs. NCBI nr
Match: XP_038888900.1 (elongation of fatty acids protein 3-like [Benincasa hispida])

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-51
Identity = 110/134 (82.09%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 6   LSTLQMNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSILKPIS 65
           LS   +NHPI LNFAW+EGQTFGSSPFFLIFTIFSYLS TFLLSHI  P ISP  LK IS
Sbjct: 4   LSIFLVNHPILLNFAWVEGQTFGSSPFFLIFTIFSYLSLTFLLSHIPFPSISPQFLKAIS 63

Query: 66  GLHNFTLLILSFIMAIGSILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIFYLSKIHEF 125
            LHNF LLIL FIMAIG  LSSIYHV HPL LICFPPQTPP GPLFFWAYIFYLSKI E 
Sbjct: 64  SLHNFILLILYFIMAIGCTLSSIYHVSHPLLLICFPPQTPPIGPLFFWAYIFYLSKILEL 123

Query: 126 LDTLLIILSKSYQR 140
           LDTLLIILS+SYQR
Sbjct: 124 LDTLLIILSRSYQR 137

[Close]

BLAST of Cmc11g0293021 vs. NCBI nr
Match: XP_023529341.1 (elongation of fatty acids protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-45
Identity = 95/129 (73.64%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 11  MNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSILKPISGLHNF 70
           +NHPI L+F WI+GQTFGS+P FLI T+FSYL  T LLSHI +P ISP  LKPIS LHNF
Sbjct: 13  VNHPIILDFEWIQGQTFGSTPLFLILTVFSYLFLTLLLSHIPLPSISPHFLKPISALHNF 72

Query: 71  TLLILSFIMAIGSILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIFYLSKIHEFLDTLL 130
            LL LSFIMA+G  LSSIYHVPH  +LICFPP+TPP GPLFFWAY+FYLSKI EF+DTLL
Sbjct: 73  VLLTLSFIMALGCALSSIYHVPHLHWLICFPPRTPPVGPLFFWAYVFYLSKILEFIDTLL 132

Query: 131 IILSKSYQR 140
           IIL+ S+QR
Sbjct: 133 IILTGSFQR 141

[Close]

BLAST of Cmc11g0293021 vs. NCBI nr
Match: XP_022927675.1 (elongation of fatty acids protein 3-like [Cucurbita moschata])

HSP 1 Score: 191.8 bits (486), Expect = 4.5e-45
Identity = 95/129 (73.64%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 11  MNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSILKPISGLHNF 70
           +NHPI L+F WI+GQTFGS+P FLI T+FSYL  T LLSHI +P ISP  LKPIS LHNF
Sbjct: 13  VNHPIILDFEWIQGQTFGSTPLFLILTVFSYLFLTLLLSHIPLPSISPHFLKPISALHNF 72

Query: 71  TLLILSFIMAIGSILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIFYLSKIHEFLDTLL 130
            LL LSFIMA+G  LSSIYHVPH  +LICFPP+TPP GPLFFWAY+FYLSKI EF+DTLL
Sbjct: 73  VLLSLSFIMALGCALSSIYHVPHLHWLICFPPRTPPVGPLFFWAYVFYLSKILEFVDTLL 132

Query: 131 IILSKSYQR 140
           IIL+ S+QR
Sbjct: 133 IILTGSFQR 141

[Close]

BLAST of Cmc11g0293021 vs. NCBI nr
Match: KAG7022581.1 (Elongation of fatty acids protein 3-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.8 bits (486), Expect = 4.5e-45
Identity = 95/129 (73.64%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 11  MNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSILKPISGLHNF 70
           +NHPI L+F WI+GQTFGS+P FLI T+FSYL  T LLSHI +P ISP  LKPIS LHNF
Sbjct: 13  VNHPIILDFEWIQGQTFGSTPLFLILTVFSYLFLTLLLSHIPLPSISPHFLKPISALHNF 72

Query: 71  TLLILSFIMAIGSILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIFYLSKIHEFLDTLL 130
            LL LSFIMA+G  LSSIYHVPH  +LICFPP+TPP GPLFFWAY+FYLSKI EF+DTLL
Sbjct: 73  VLLSLSFIMALGCALSSIYHVPHLHWLICFPPRTPPVGPLFFWAYVFYLSKILEFVDTLL 132

Query: 131 IILSKSYQR 140
           IIL+ S+QR
Sbjct: 133 IILTGSFQR 141

[Close]

BLAST of Cmc11g0293021 vs. ExPASy Swiss-Prot
Match: Q555E8 (Putative elongation of fatty acids protein DDB_G0274669 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0274669 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.8e-08
Identity = 44/121 (36.36%), Postives = 61/121 (50.41%), Query Frame = 0


Query: 18  NFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSILKPISGLHNFTLLILSF 77
           NF       F   P  L+  + +  S  FL+ +       P  LK IS LHN  L I S 
Sbjct: 42  NFGVTPFSQFQIIPIVLVIYLVTIFSIKFLMKN-----RKPFSLKFISILHNAILCIWSL 101

Query: 78  IMAIGSILSSIYHVPH--PLFLICFPPQTP-PTGPLFFWAYIFYLSKIHEFLDTLLIILS 136
           IM +G +   I  V +  PLF +C  P      G  ++W+YIFY+SK +E LDT++I+L 
Sbjct: 102 IMCVGVLYEIIKRVSNEGPLFTVCEDPNGGFDKGVTYYWSYIFYISKFYELLDTVIIVLK 157

[Close]

BLAST of Cmc11g0293021 vs. ExPASy Swiss-Prot
Match: Q86JM5 (Putative elongation of fatty acids protein DDB_G0272012 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0272012 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-07
Identity = 42/115 (36.52%), Postives = 61/115 (53.04%), Query Frame = 0


Query: 27  FGSSPF----FLIFTIFSYLSFTFLLSHISIPPISPSILKPISGLHNFTLLILSFIMAIG 86
           FG++PF     L   I  YL   F +  + +    P  LK +S LHN  L I S +M +G
Sbjct: 43  FGTTPFSQFQILPSVISLYLVIIFSIKFL-MRNRKPFSLKYVSILHNAILCIWSLVMCVG 102

Query: 87  SILSSIYHV--PHPLFLICFPPQTPPTGPLFFWAYIFYLSKIHEFLDTLLIILSK 136
            +   I  +    PLF +C        GP ++W+YIFY+SK +E LDT++I+L K
Sbjct: 103 ILYEVIKRITAEGPLFTVCETVSGFDKGPAYYWSYIFYISKFYELLDTVIIVLKK 156

[Close]

BLAST of Cmc11g0293021 vs. ExPASy Swiss-Prot
Match: Q54TC9 (Elongation of fatty acids protein sre1 OS=Dictyostelium discoideum OX=44689 GN=sre1 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.6e-06
Identity = 43/120 (35.83%), Postives = 58/120 (48.33%), Query Frame = 0


Query: 18  NFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSILKPISGLHNFTLLILSF 77
           NF W  G T  SS  F   T   Y+   F L  I +      +LK  S +HN  L+ILSF
Sbjct: 17  NFRWESGVTPLSSYVFPFSTSVIYVLVIFALQAI-MKNKKGMVLKGFSIIHNINLIILSF 76

Query: 78  IMAIGSILSSI--YHVPHPLFLICFPPQTPPTGPLFFWAYIFYLSKIHEFLDTLLIILSK 136
            M  G + ++   Y       L+C        G + FW YIFYLSK +E +DT+++ L K
Sbjct: 77  SMMSGVMYAAYQQYLEQGAFSLVCEQSSQSVQGRIGFWIYIFYLSKYYELVDTVILALKK 135

[Close]

BLAST of Cmc11g0293021 vs. ExPASy Swiss-Prot
Match: Q9SYY4 (Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana OX=3702 GN=HOS3 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.3e-06
Identity = 42/138 (30.43%), Postives = 69/138 (50.00%), Query Frame = 0


Query: 13  HPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPS----ILKPISGLH 72
           HP  + F W   Q++GS+  FL  +I  Y++ +  L HI +  +  S     L  I  +H
Sbjct: 16  HPYIVGFRWSNSQSWGSTWSFLFTSISLYIAVSSSL-HILLSAVRRSNRSVPLGHIPEIH 75

Query: 73  NFTLLILSFIMAIGSILSSIYHV------------PHPL-FLICFPPQTPPTGPLFFWAY 132
           +  + ILS  +  G +LS+   +              PL +L+CFP  T P+G +FFW+Y
Sbjct: 76  SLLMSILSATIFAGILLSAAAEIRDTRWLWRRSKTATPLQWLLCFPLGTRPSGRVFFWSY 135

Query: 133 IFYLSKIHEFLDTLLIIL 134
           +FYL++      T+  +L
Sbjct: 136 VFYLTRFLHMFRTIFAVL 152

[Close]

BLAST of Cmc11g0293021 vs. ExPASy Swiss-Prot
Match: Q54CJ4 (Elongation of fatty acids protein A OS=Dictyostelium discoideum OX=44689 GN=eloA PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.9e-04
Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 0


Query: 19  FAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSILKPISGLHNFTLLILSFI 78
           F W    T  S+  F I   F YL+  + L  I +       L   +  HN  L +LS +
Sbjct: 23  FRWKNEVTPFSNILFPIVCSFGYLALIYGL-QIFMKNKKEIKLHGFAMFHNLFLCLLSLL 82

Query: 79  MAIGSIL-SSIYHVPHPLF-LICFPPQTPPTGPLFFWAYIFYLSKIHEFLDTLLIILSK 136
           M +G ++  + Y  PH L+ +IC P     +G + F  YIFYLSK++EF+DT++ +L K
Sbjct: 83  MFLGIVIPMAKYSFPHGLYNIICKPID---SGLVQFSYYIFYLSKVYEFIDTIIQVLRK 137

[Close]

BLAST of Cmc11g0293021 vs. ExPASy TrEMBL
Match: A0A1S3C245 (elongation of fatty acids protein 3-like OS=Cucumis melo OX=3656 GN=LOC103496032 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.3e-70
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MSYLILSTLQMNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSI 60
           MSYLILSTLQMNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSI
Sbjct: 1   MSYLILSTLQMNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSI 60

Query: 61  LKPISGLHNFTLLILSFIMAIGSILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIFYLS 120
           LKPISGLHNFTLLILSFIMAIGSILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIFYLS
Sbjct: 61  LKPISGLHNFTLLILSFIMAIGSILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIFYLS 120

Query: 121 KIHEFLDTLLIILSKSYQR 140
           KIHEFLDTLLIILSKSYQR
Sbjct: 121 KIHEFLDTLLIILSKSYQR 139

[Close]

BLAST of Cmc11g0293021 vs. ExPASy TrEMBL
Match: A0A6J1EPN2 (Very-long-chain 3-oxoacyl-CoA synthase OS=Cucurbita moschata OX=3662 GN=LOC111434494 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.2e-45
Identity = 95/129 (73.64%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 11  MNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSILKPISGLHNF 70
           +NHPI L+F WI+GQTFGS+P FLI T+FSYL  T LLSHI +P ISP  LKPIS LHNF
Sbjct: 13  VNHPIILDFEWIQGQTFGSTPLFLILTVFSYLFLTLLLSHIPLPSISPHFLKPISALHNF 72

Query: 71  TLLILSFIMAIGSILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIFYLSKIHEFLDTLL 130
            LL LSFIMA+G  LSSIYHVPH  +LICFPP+TPP GPLFFWAY+FYLSKI EF+DTLL
Sbjct: 73  VLLSLSFIMALGCALSSIYHVPHLHWLICFPPRTPPVGPLFFWAYVFYLSKILEFVDTLL 132

Query: 131 IILSKSYQR 140
           IIL+ S+QR
Sbjct: 133 IILTGSFQR 141

[Close]

BLAST of Cmc11g0293021 vs. ExPASy TrEMBL
Match: A0A5A7UQE3 (Very-long-chain 3-oxoacyl-CoA synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00180 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 8.2e-45
Identity = 97/138 (70.29%), Postives = 110/138 (79.71%), Query Frame = 0


Query: 5   ILSTLQ---MNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSIL 64
           ILS L+   +NHP  L F WI+GQTF S+P FLI T+F+YL  TFLLSHI IP  SP  L
Sbjct: 4   ILSVLRYWLVNHPSILKFEWIQGQTFASTPLFLILTVFTYLFLTFLLSHIPIPSFSPHFL 63

Query: 65  KPISGLHNFTLLILSFIMAIGSILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIFYLSK 124
           KPIS LHNF LLILSFIMA+G  LSSIYHVPH  ++ICFPP TPP GPLFFWAY+FYLSK
Sbjct: 64  KPISALHNFVLLILSFIMALGCTLSSIYHVPHLHWIICFPPHTPPVGPLFFWAYVFYLSK 123

Query: 125 IHEFLDTLLIILSKSYQR 140
           I EF+DTLLIIL+ S+QR
Sbjct: 124 ILEFIDTLLIILTGSFQR 141

[Close]

BLAST of Cmc11g0293021 vs. ExPASy TrEMBL
Match: A0A0A0KJH8 (Very-long-chain 3-oxoacyl-CoA synthase OS=Cucumis sativus OX=3659 GN=Csa_6G411300 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 8.2e-45
Identity = 98/138 (71.01%), Postives = 112/138 (81.16%), Query Frame = 0


Query: 5   ILSTLQ---MNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSIL 64
           ILS L+   +NHPI LNF WI+GQTF S+P FLI T+F+YL  TFLLSHI IP IS   L
Sbjct: 4   ILSVLRYWLVNHPIILNFEWIQGQTFASTPLFLIVTVFTYLFLTFLLSHIPIPSISSHFL 63

Query: 65  KPISGLHNFTLLILSFIMAIGSILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIFYLSK 124
           K IS LHNF LLILSFIMA+G  LSSIYHVPH  ++ICFPP+TPP GPLFFWAY+FYLSK
Sbjct: 64  KSISALHNFVLLILSFIMALGCTLSSIYHVPHLHWIICFPPRTPPVGPLFFWAYVFYLSK 123

Query: 125 IHEFLDTLLIILSKSYQR 140
           I EF+DTLLIIL+ S+QR
Sbjct: 124 ILEFIDTLLIILTGSFQR 141

[Close]

BLAST of Cmc11g0293021 vs. ExPASy TrEMBL
Match: A0A1S4DXJ2 (Very-long-chain 3-oxoacyl-CoA synthase OS=Cucumis melo OX=3656 GN=LOC103491307 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 8.2e-45
Identity = 97/138 (70.29%), Postives = 110/138 (79.71%), Query Frame = 0


Query: 5   ILSTLQ---MNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPSIL 64
           ILS L+   +NHP  L F WI+GQTF S+P FLI T+F+YL  TFLLSHI IP  SP  L
Sbjct: 4   ILSVLRYWLVNHPSILKFEWIQGQTFASTPLFLILTVFTYLFLTFLLSHIPIPSFSPHFL 63

Query: 65  KPISGLHNFTLLILSFIMAIGSILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIFYLSK 124
           KPIS LHNF LLILSFIMA+G  LSSIYHVPH  ++ICFPP TPP GPLFFWAY+FYLSK
Sbjct: 64  KPISALHNFVLLILSFIMALGCTLSSIYHVPHLHWIICFPPHTPPVGPLFFWAYVFYLSK 123

Query: 125 IHEFLDTLLIILSKSYQR 140
           I EF+DTLLIIL+ S+QR
Sbjct: 124 ILEFIDTLLIILTGSFQR 141

[Close]

BLAST of Cmc11g0293021 vs. TAIR 10
Match: AT3G06470.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 122.1 bits (305), Expect = 4.1e-28
Identity = 74/145 (51.03%), Postives = 91/145 (62.76%), Query Frame = 0


Query: 3   YLILSTLQMNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHI--SIPPISPSI 62
           Y  L+   +NHP   NF WIEG+T GS+ FF+   +  YLS TFLL     S+P +SP I
Sbjct: 5   YSSLTYWLVNHPYISNFTWIEGETLGSTVFFVSVVVSVYLSATFLLRSAIDSLPSLSPRI 64

Query: 63  LKPISGLHNFTLLILSFIMAIGSILS--SIYHVPHP----LFLICFPPQTPPTGPLFFWA 122
           LKPI+ +H+  L +LS +MA+G  LS  S +    P    L  ICFP    P GPLFFWA
Sbjct: 65  LKPITAVHSLILCLLSLVMAVGCTLSITSSHASSDPMARFLHAICFPVDVKPNGPLFFWA 124

Query: 123 YIFYLSKIHEFLDTLLIILSKSYQR 140
            +FYLSKI EF DT+LIIL KS QR
Sbjct: 125 QVFYLSKILEFGDTILIILGKSIQR 149

[Close]

BLAST of Cmc11g0293021 vs. TAIR 10
Match: AT3G06460.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 120.2 bits (300), Expect = 1.5e-27
Identity = 69/142 (48.59%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 3   YLILSTLQMNHPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHI--SIPPISPSI 62
           Y  L+   ++HP   NF W EG+T GS+ FF+   +  YLS TFLL +   S+P + P I
Sbjct: 5   YSTLTYWLVHHPYIANFTWTEGETLGSTVFFVFVVVSLYLSATFLLRYTVDSLPTLGPRI 64

Query: 63  LKPISGLHNFTLLILSFIMAIG---SILSSIYHVPHPLFLICFPPQTPPTGPLFFWAYIF 122
           LKPI+ +H+  L +LS  MA+G   S++SS          +CFP    P GPLFFWA +F
Sbjct: 65  LKPITAVHSLILFLLSLTMAVGCTLSLISSSDPKARLFDAVCFPLDVKPKGPLFFWAQVF 124

Query: 123 YLSKIHEFLDTLLIILSKSYQR 140
           YLSKI EF+DTLLIIL+KS QR
Sbjct: 125 YLSKILEFVDTLLIILNKSIQR 146

[Close]

BLAST of Cmc11g0293021 vs. TAIR 10
Match: AT1G75000.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 55.8 bits (133), Expect = 3.6e-08
Identity = 40/141 (28.37%), Postives = 67/141 (47.52%), Query Frame = 0


Query: 13  HPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPS------ILKPISG 72
           HP  +NF W   Q++ S+  FL   + SY+     L  + +  +S S       L PI  
Sbjct: 11  HPTIVNFRWSPTQSYASTWSFLFTAVSSYIIAAVTLHLLLLITLSLSNRRRGFSLGPIPA 70

Query: 73  LHNFTLLILSFIMAIGSILSSIYHVPHPLFL------------ICFPPQTPPTGPLFFWA 132
           LH+ T+ I+S ++ +G +LS+   +    +L            +CFP  T  +G +FFW+
Sbjct: 71  LHSLTISIISAVIFVGILLSAAAEIRDTRWLWRRTRTTALQWFLCFPVGTRASGRVFFWS 130

Query: 133 YIFYLSKIHEFLDTLLIILSK 136
           Y FYLS+      T   ++ +
Sbjct: 131 YAFYLSRFLHLFRTFFSVIRR 151

[Close]

BLAST of Cmc11g0293021 vs. TAIR 10
Match: AT4G36830.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 52.0 bits (123), Expect = 5.2e-07
Identity = 42/138 (30.43%), Postives = 69/138 (50.00%), Query Frame = 0


Query: 13  HPIFLNFAWIEGQTFGSSPFFLIFTIFSYLSFTFLLSHISIPPISPS----ILKPISGLH 72
           HP  + F W   Q++GS+  FL  +I  Y++ +  L HI +  +  S     L  I  +H
Sbjct: 16  HPYIVGFRWSNSQSWGSTWSFLFTSISLYIAVSSSL-HILLSAVRRSNRSVPLGHIPEIH 75

Query: 73  NFTLLILSFIMAIGSILSSIYHV------------PHPL-FLICFPPQTPPTGPLFFWAY 132
           +  + ILS  +  G +LS+   +              PL +L+CFP  T P+G +FFW+Y
Sbjct: 76  SLLMSILSATIFAGILLSAAAEIRDTRWLWRRSKTATPLQWLLCFPLGTRPSGRVFFWSY 135

Query: 133 IFYLSKIHEFLDTLLIIL 134
           +FYL++      T+  +L
Sbjct: 136 VFYLTRFLHMFRTIFAVL 152

The following BLAST results are available for this feature:

BLAST of Cmc11g0293021 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455969.2	6.9e-70	100.00	PREDICTED: elongation of fatty acids protein 3-like [Cucumis melo]	[more]
XP_038888900.1	1.1e-51	82.09	elongation of fatty acids protein 3-like [Benincasa hispida]	[more]
XP_023529341.1	2.6e-45	73.64	elongation of fatty acids protein 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022927675.1	4.5e-45	73.64	elongation of fatty acids protein 3-like [Cucurbita moschata]	[more]
KAG7022581.1	4.5e-45	73.64	Elongation of fatty acids protein 3-like protein, partial [Cucurbita argyrosperm...	[more]

BLAST of Cmc11g0293021 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q555E8	7.8e-08	36.36	Putative elongation of fatty acids protein DDB_G0274669 OS=Dictyostelium discoid...	[more]
Q86JM5	1.0e-07	36.52	Putative elongation of fatty acids protein DDB_G0272012 OS=Dictyostelium discoid...	[more]
Q54TC9	5.6e-06	35.83	Elongation of fatty acids protein sre1 OS=Dictyostelium discoideum OX=44689 GN=s...	[more]
Q9SYY4	7.3e-06	30.43	Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana OX=3702 GN=HOS3...	[more]
Q54CJ4	8.9e-04	34.45	Elongation of fatty acids protein A OS=Dictyostelium discoideum OX=44689 GN=eloA...	[more]

BLAST of Cmc11g0293021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C245	3.3e-70	100.00	elongation of fatty acids protein 3-like OS=Cucumis melo OX=3656 GN=LOC103496032...	[more]
A0A6J1EPN2	2.2e-45	73.64	Very-long-chain 3-oxoacyl-CoA synthase OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A5A7UQE3	8.2e-45	70.29	Very-long-chain 3-oxoacyl-CoA synthase OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KJH8	8.2e-45	71.01	Very-long-chain 3-oxoacyl-CoA synthase OS=Cucumis sativus OX=3659 GN=Csa_6G41130...	[more]
A0A1S4DXJ2	8.2e-45	70.29	Very-long-chain 3-oxoacyl-CoA synthase OS=Cucumis melo OX=3656 GN=LOC103491307 P...	[more]

BLAST of Cmc11g0293021 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06470.1	4.1e-28	51.03	GNS1/SUR4 membrane protein family	[more]
AT3G06460.1	1.5e-27	48.59	GNS1/SUR4 membrane protein family	[more]
AT1G75000.1	3.6e-08	28.37	GNS1/SUR4 membrane protein family	[more]
AT4G36830.1	5.2e-07	30.43	GNS1/SUR4 membrane protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002076	ELO family	PFAM	PF01151	ELO	coord: 29..136 e-value: 3.1E-15 score: 56.4
IPR002076	ELO family	PANTHER	PTHR11157	FATTY ACID ACYL TRANSFERASE-RELATED	coord: 8..139
None	No IPR available	PANTHER	PTHR11157:SF132	ELONGATION OF FATTY ACIDS PROTEIN 3-LIKE	coord: 8..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0293021.1	Cmc11g0293021.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009922	fatty acid elongase activity