Cmc11g0292901 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0292901
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Transposon Ty3-I Gag-Pol polyprotein
Location	CMiso1.1chr11: 8908932 .. 8910487 (+)
RNA-Seq Expression	Cmc11g0292901
Synteny	Cmc11g0292901

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAAAGGGTATATTAGAGAAAGTATGAGTCCTTGCTCAGTTCTGGTGATTTTGGTACCCAAGAAAGATGGTACGTGGAGGATGTGTGTTGATTGCCGAGCTATCAATAAAATAACGGTAAAGTATCGACATCCTATTCCTCGATTAGATGACATGTTAGATGAATTGCATGGTGCTAATCTGTTTTCAAAAATAGACCTTAAAAGCGATTATCATCAAATTCGTATGCATGTAGGAGATGAATGGAAAATGGCTTTCAAAACAAAGTTTGGGCTTTATGAATGGCTTGTTATGCCGTTTGGCCTTACTAATGCACCAAGTACTTTTATGAGGTTAATGAATCATGTTTTGAAGGAATACATGGAAATTTGTGGTTGTATACTTTGATGATATCCTTGTTTACTCAAAAGGCTTGAATGATCATATTTTGCATCTTAAGACAATTTTACTCAAACTTAGAGAAGAGAAGCTTTATGCCAACTTCAAAAAGTGTAGTTTTTGTCTAGAACAAATACATTTCCTAGGGTTCATTGTTGGAAAGGATGGAGTAAAAGTTGATGAAGAAAAGGTAAAGGCTATCCGAGAATGGCCAACTCCTACCAATGCATCCGAGGTAAGATCCTTCCATGGTCTGGCTAGTTTCTATAGGAGATTTATTAAAGATTTTAGTAGCATAGCCTCACCATTAACTGAACTTGTGAAAAAGCATGTGAAATTTGAATGGAAAGGAAAGCAGGAAAATGCATTCAATGAGCTTAAAGAAAAATTCATCAAAGCACCTTATCTTGCTTTACCTAACTTTGATAAATCTTTTGAGATAGAATGTGATGCAAGTGGGATAGGTATAGGGGCTGTTTTGATGCAAGAAAAGCAACCAATCATGTTCTTTAGTGAAAAACTAAATGGAGCTCAACTCAACTACTCTACCTATGACAAGGAGCTACATGCGCTTGTGAGGGCTTTGAAAGTTTGGCAACATTACTTATGTCCAAAACAGTTTGTTATCCACACGGATCATGAAAGCTTGAAGCATCTCAAAGGTCAAACTAAACTAACAAGAGGCATGCGAAATGGGTGGAATTTATTGACACATTTCCTTATGTCATCCATTACAAAAAGGGTAAGGACAATATGGTGGCCGATGCATTATCAAGAAGGTATGCTTTATTCTCATCCCTTAGTGCAAAAGTTCTTGGTTTTAAACACATGATTGAGTTGTACAAAGTTGAGAAATCTGAATTTTATGATGTGTATGCACAATGTTTAGAAGGGAAAAATGTTCAAGATTATATTGTGTTTAATGGGATGCTTTTTAGGAAGGAAAGCTTTGTATTCCTAAGTGTTCCATTAGAGAGTTACTTGTGAAGGAAGCTCATGGGGGAGTACTTATGGGACATTTTGGAGAATTTAAAACATATAGCATGTTGTGTGAACACTTTTATTGGCTAAAAATGAGGAAAGATGTGAACAAAGTGTGCAAGCAATGTTTCAAGTGTAAGGAGGCTAAGTCCAACACAACCACATGGCCTTTACACACCATTAGATGTTCCTAA

mRNA sequence

ATGGATAAAGGGTATATTAGAGAAAGTATGAGTCCTTGCTCAGTTCTGGTGATTTTGGTACCCAAGAAAGATGGTACGTGGAGGATGTGTGTTGATTGCCGAGCTATCAATAAAATAACGGTAAAGTATCGACATCCTATTCCTCGATTAGATGACATGTTAGATGAATTGCATGGTGCTAATCTGTTTTCAAAAATAGACCTTAAAAGCGATTATCATCAAATTCGTATGCATGTAGGAGATGAATGGAAAATGGCTTTCAAAACAAAGTTTGGGCTTTATGAATGGCTTGTTATGCCGAATACATGGAAATTTGTGGTTGTATACTTTGATGATATCCTTGTTTACTCAAAAGGCTTGAATGATCATATTTTGCATCTTAAGACAATTTTACTCAAACTTAGAGAAGAGAAGCTTTATGCCAACTTCAAAAAGTGTAGTTTTTGTCTAGAACAAATACATTTCCTAGGGTTCATTGTTGGAAAGGATGGAGTAAAAGTTGATGAAGAAAAGGTAAAGGCTATCCGAGAATGGCCAACTCCTACCAATGCATCCGAGGTAAGATCCTTCCATGGTCTGGCTAGTTTCTATAGGAGATTTATTAAAGATTTTAGTAGCATAGCCTCACCATTAACTGAACTTGTGAAAAAGCATGTGAAATTTGAATGGAAAGGAAAGCAGGAAAATGCATTCAATGAGCTTAAAGAAAAATTCATCAAAGCACCTTATCTTGCTTTACCTAACTTTGATAAATCTTTTGAGATAGAATGTGATGCAAGTGGGATAGGTATAGGGGCTGTTTTGATGCAAGAAAAGCAACCAATCATGTTCTTTAGTGAAAAACTAAATGGAGCTCAACTCAACTACTCTACCTATGACAAGGAGCTACATGCGCTTGTGAGGGCTTTGAAAGTTTGGCAACATTACTTATGTCCAAAACAGTTTGTTATCCACACGGATCATGAAAGCTTGAAGCATCTCAAAGGTCAAACTAAACTAACAAGAGGCATGCGAAATGGGTGGAATTTATTGACACATTTCCTTATGTCATCCATTACAAAAAGGGTAAGGACAATATGGTGGCCGATGCATTATCAAGAAGGAAAGCTTTGTATTCCTAAGTGTTCCATTAGAGAGTTACTTGTGAAGGAAGCTCATGGGGGAGTACTTATGGGACATTTTGGAGAATTTAAAACATATAGCATGTTGTGTGAACACTTTTATTGGCTAAAAATGAGGAAAGATGTGAACAAAGTGTGCAAGCAATGTTTCAAGTGTAAGGAGGCTAAGTCCAACACAACCACATGGCCTTTACACACCATTAGATGTTCCTAA

Coding sequence (CDS)

ATGGATAAAGGGTATATTAGAGAAAGTATGAGTCCTTGCTCAGTTCTGGTGATTTTGGTACCCAAGAAAGATGGTACGTGGAGGATGTGTGTTGATTGCCGAGCTATCAATAAAATAACGGTAAAGTATCGACATCCTATTCCTCGATTAGATGACATGTTAGATGAATTGCATGGTGCTAATCTGTTTTCAAAAATAGACCTTAAAAGCGATTATCATCAAATTCGTATGCATGTAGGAGATGAATGGAAAATGGCTTTCAAAACAAAGTTTGGGCTTTATGAATGGCTTGTTATGCCGAATACATGGAAATTTGTGGTTGTATACTTTGATGATATCCTTGTTTACTCAAAAGGCTTGAATGATCATATTTTGCATCTTAAGACAATTTTACTCAAACTTAGAGAAGAGAAGCTTTATGCCAACTTCAAAAAGTGTAGTTTTTGTCTAGAACAAATACATTTCCTAGGGTTCATTGTTGGAAAGGATGGAGTAAAAGTTGATGAAGAAAAGGTAAAGGCTATCCGAGAATGGCCAACTCCTACCAATGCATCCGAGGTAAGATCCTTCCATGGTCTGGCTAGTTTCTATAGGAGATTTATTAAAGATTTTAGTAGCATAGCCTCACCATTAACTGAACTTGTGAAAAAGCATGTGAAATTTGAATGGAAAGGAAAGCAGGAAAATGCATTCAATGAGCTTAAAGAAAAATTCATCAAAGCACCTTATCTTGCTTTACCTAACTTTGATAAATCTTTTGAGATAGAATGTGATGCAAGTGGGATAGGTATAGGGGCTGTTTTGATGCAAGAAAAGCAACCAATCATGTTCTTTAGTGAAAAACTAAATGGAGCTCAACTCAACTACTCTACCTATGACAAGGAGCTACATGCGCTTGTGAGGGCTTTGAAAGTTTGGCAACATTACTTATGTCCAAAACAGTTTGTTATCCACACGGATCATGAAAGCTTGAAGCATCTCAAAGGTCAAACTAAACTAACAAGAGGCATGCGAAATGGGTGGAATTTATTGACACATTTCCTTATGTCATCCATTACAAAAAGGGTAAGGACAATATGGTGGCCGATGCATTATCAAGAAGGAAAGCTTTGTATTCCTAAGTGTTCCATTAGAGAGTTACTTGTGAAGGAAGCTCATGGGGGAGTACTTATGGGACATTTTGGAGAATTTAAAACATATAGCATGTTGTGTGAACACTTTTATTGGCTAAAAATGAGGAAAGATGTGAACAAAGTGTGCAAGCAATGTTTCAAGTGTAAGGAGGCTAAGTCCAACACAACCACATGGCCTTTACACACCATTAGATGTTCCTAA

Protein sequence

MDKGYIRESMSPCSVLVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGANLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVMPNTWKFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVKFEWKGKQENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSEKLNGAQLNYSTYDKELHALVRALKVWQHYLCPKQFVIHTDHESLKHLKGQTKLTRGMRNGWNLLTHFLMSSITKRVRTIWWPMHYQEGKLCIPKCSIRELLVKEAHGGVLMGHFGEFKTYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSNTTTWPLHTIRCS

Homology

[Close]

BLAST of Cmc11g0292901 vs. NCBI nr
Match: KAA0059666.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 768.8 bits (1984), Expect = 2.5e-218
Identity = 385/462 (83.33%), Postives = 399/462 (86.36%), Query Frame = 0


Query: 1   MDKGYIRESMSPCSVLVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 60
           MDKGYIRESMSPCSV VILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA
Sbjct: 458 MDKGYIRESMSPCSVSVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 517

Query: 61  NLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVM-------PNTW---------- 120
           NLFSKIDLKSDYHQIRMHVGDEWK AFKTKFGLYEWLVM       P+T+          
Sbjct: 518 NLFSKIDLKSDYHQIRMHVGDEWKTAFKTKFGLYEWLVMSFGLTNAPSTFTRLMNHVLKE 577

Query: 121 ---KFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 180
              KFVVVYFDDILVYSKGLNDHILH+KTILLKLREEKLYANFKKC FCLEQIHFLGFIV
Sbjct: 578 YVGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCIFCLEQIHFLGFIV 637

Query: 181 GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 240
           GKDGVKVDEEKVKAI+EWPTPTNASEV SFHGLASFYRRFIKDFSSI SPLTELVKKHVK
Sbjct: 638 GKDGVKVDEEKVKAIQEWPTPTNASEVISFHGLASFYRRFIKDFSSITSPLTELVKKHVK 697

Query: 241 FEWKGKQENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 300
           FEWK KQENAFNELKEK IKAP LALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE
Sbjct: 698 FEWKEKQENAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 757

Query: 301 KLNGAQLNYSTYDKELHALVRALKVWQHYLCPKQFVIHTDHESLKHLKGQTKLTRGMRNG 360
           KLNGAQLNYSTYDKELHALVRALKVWQHYL PK+FVIHTDHESLKHLKGQTKL +     
Sbjct: 758 KLNGAQLNYSTYDKELHALVRALKVWQHYLWPKEFVIHTDHESLKHLKGQTKLNKRHAKW 817

Query: 361 WNLLTHFLMSSITKRVR--TIWWPMHYQEGKLCIPKCSIRELLVKEAHGGVLMGHFGEFK 420
              +  F      K+ +   +   +   +GKLCIPKCSIRE LVKEAHGG LMGHFGEFK
Sbjct: 818 VEFIETFPYVIHYKKGKDNMVADALSRWKGKLCIPKCSIRESLVKEAHGGGLMGHFGEFK 877

Query: 421 TYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSNTTTWPLHT 441
           TYS+LCEHFYWLKMRKDVNKVCKQCFKCKEAKS T    L+T
Sbjct: 878 TYSILCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYT 919

[Close]

BLAST of Cmc11g0292901 vs. NCBI nr
Match: TYK22420.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 767.7 bits (1981), Expect = 5.5e-218
Identity = 394/515 (76.50%), Postives = 409/515 (79.42%), Query Frame = 0


Query: 1    MDKGYIRESMSPCSVLVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 60
            MDKGYIRESMSPCSV VILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA
Sbjct: 498  MDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 557

Query: 61   NLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVM-------PNTW---------- 120
            NLFSKIDLKS YHQIRMHVGDEWK AFKTKFGLYEWLVM       P+T+          
Sbjct: 558  NLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKE 617

Query: 121  ---KFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 180
               KFVVVYFDDILVYSKGLNDHILH+KTILLKLREEKLYANFKKCSFCLEQIHFLGFIV
Sbjct: 618  YIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 677

Query: 181  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 240
            GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK
Sbjct: 678  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 737

Query: 241  FEWKGKQENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 300
            FEWK KQENAFNELKEK IKAP LALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE
Sbjct: 738  FEWKEKQENAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 797

Query: 301  KLNGAQLNYSTYDKELHALVRALKVWQHYLCPKQFVIHTDHESLKHLKGQTKLTRGMRNG 360
            KLNGAQLNYSTYDKELHALVRALKVWQHYL PK+FVIHTDHESLKHLKGQTKL +     
Sbjct: 798  KLNGAQLNYSTYDKELHALVRALKVWQHYLWPKEFVIHTDHESLKHLKGQTKLNKRHAKW 857

Query: 361  WNLLTHF-----------------------LMSSITKRV--------------------- 420
               +  F                       L SS++ +V                     
Sbjct: 858  VEFIETFPYVIHYKKGKDNMVADALSRRYALFSSLSAKVLGFKHMIELYKVEKSEFYDVY 917

Query: 421  -----------RTIWWPMHYQEGKLCIPKCSIRELLVKEAHGGVLMGHFGEFKTYSMLCE 441
                         ++  M +++GKLCIPKCSIRELLVKEAHGG LMGHFGEFKTYSMLCE
Sbjct: 918  AQCLEGKNVQDYIVFDGMLFRKGKLCIPKCSIRELLVKEAHGGGLMGHFGEFKTYSMLCE 977

[Close]

BLAST of Cmc11g0292901 vs. NCBI nr
Match: TYK11702.1 (F15O4.13 [Cucumis melo var. makuwa])

HSP 1 Score: 767.7 bits (1981), Expect = 5.5e-218
Identity = 394/515 (76.50%), Postives = 409/515 (79.42%), Query Frame = 0


Query: 1    MDKGYIRESMSPCSVLVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 60
            MDKGYIRESMSPCSV VILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA
Sbjct: 599  MDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 658

Query: 61   NLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVM-------PNTW---------- 120
            NLFSKIDLKS YHQIRMHVGDEWK AFKTKFGLYEWLVM       P+T+          
Sbjct: 659  NLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKE 718

Query: 121  ---KFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 180
               KFVVVYFDDILVYSKGLNDHILH+KTILLKLREEKLYANFKKCSFCLEQIHFLGFIV
Sbjct: 719  YIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 778

Query: 181  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 240
            GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK
Sbjct: 779  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 838

Query: 241  FEWKGKQENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 300
            FEWK KQENAFNELKEK IKAP LALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE
Sbjct: 839  FEWKEKQENAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 898

Query: 301  KLNGAQLNYSTYDKELHALVRALKVWQHYLCPKQFVIHTDHESLKHLKGQTKLTRGMRNG 360
            KLNGAQLNYSTYDKELHALVRALKVWQHYL PK+FVIHTDHESLKHLKGQTKL +     
Sbjct: 899  KLNGAQLNYSTYDKELHALVRALKVWQHYLWPKEFVIHTDHESLKHLKGQTKLNKRHAKW 958

Query: 361  WNLLTHF-----------------------LMSSITKRV--------------------- 420
               +  F                       L SS++ +V                     
Sbjct: 959  VEFIETFPYVIHYKKGKDNMVADALSRRYALFSSLSAKVLGFKHMIELYKVEKSEFYDVY 1018

Query: 421  -----------RTIWWPMHYQEGKLCIPKCSIRELLVKEAHGGVLMGHFGEFKTYSMLCE 441
                         ++  M +++GKLCIPKCSIRELLVKEAHGG LMGHFGEFKTYSMLCE
Sbjct: 1019 AQCLEGKNVQDYIVFDGMLFRKGKLCIPKCSIRELLVKEAHGGGLMGHFGEFKTYSMLCE 1078

[Close]

BLAST of Cmc11g0292901 vs. NCBI nr
Match: TYK26105.1 (F15O4.13 [Cucumis melo var. makuwa])

HSP 1 Score: 766.1 bits (1977), Expect = 1.6e-217
Identity = 393/515 (76.31%), Postives = 409/515 (79.42%), Query Frame = 0


Query: 1    MDKGYIRESMSPCSVLVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 60
            MDKGYIRESMSPCSV VILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA
Sbjct: 599  MDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 658

Query: 61   NLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVM-------PNTW---------- 120
            NLFSKIDLKS YHQIRMHVGDEWK AFKTKFGLYEWLVM       P+T+          
Sbjct: 659  NLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKE 718

Query: 121  ---KFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 180
               KFVVVYFDDILVYSKGLNDHILH+KTILLKLREEKLYANFKKCSFCLEQIHFLGFIV
Sbjct: 719  YIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 778

Query: 181  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 240
            GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK
Sbjct: 779  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 838

Query: 241  FEWKGKQENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 300
            FEWK KQENAFNELKEK IKAP LALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE
Sbjct: 839  FEWKEKQENAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 898

Query: 301  KLNGAQLNYSTYDKELHALVRALKVWQHYLCPKQFVIHTDHESLKHLKGQTKLTRGMRNG 360
            KLNGAQLNYSTYDKELHALVRALKVWQHYL PK+FVIHTDHESLKHLKGQTKL +     
Sbjct: 899  KLNGAQLNYSTYDKELHALVRALKVWQHYLWPKEFVIHTDHESLKHLKGQTKLNKRHAKW 958

Query: 361  WNLLTHF-----------------------LMSSITKRV--------------------- 420
               +  F                       L SS++ +V                     
Sbjct: 959  VEFIETFPYVIHYKKGKDNMVADALSRRYALFSSLSAKVLGFKHMIELYKVEKSEFYDVY 1018

Query: 421  -----------RTIWWPMHYQEGKLCIPKCSIRELLVKEAHGGVLMGHFGEFKTYSMLCE 441
                         ++  M +++GKLCIPKCSIRELLVKEAHGG LMGHFGEFKTYS+LCE
Sbjct: 1019 AQCLEGKNVQDYIVFDGMLFRKGKLCIPKCSIRELLVKEAHGGGLMGHFGEFKTYSILCE 1078

[Close]

BLAST of Cmc11g0292901 vs. NCBI nr
Match: TYK02449.1 (F15O4.13 [Cucumis melo var. makuwa])

HSP 1 Score: 766.1 bits (1977), Expect = 1.6e-217
Identity = 393/515 (76.31%), Postives = 409/515 (79.42%), Query Frame = 0


Query: 1    MDKGYIRESMSPCSVLVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 60
            MDKGYIRESMSPCSV VILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA
Sbjct: 599  MDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 658

Query: 61   NLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVM-------PNTW---------- 120
            NLFSKIDLKS YHQIRMHVGDEWK AFKTKFGLYEWLVM       P+T+          
Sbjct: 659  NLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKE 718

Query: 121  ---KFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 180
               KFVVVYFDDILVYSKGLNDHILH+KTILLKLREEKLYANFKKCSFCLEQIHFLGFIV
Sbjct: 719  YIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 778

Query: 181  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 240
            GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK
Sbjct: 779  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 838

Query: 241  FEWKGKQENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 300
            FEWK KQENAFNELKEK IKAP LALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE
Sbjct: 839  FEWKEKQENAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 898

Query: 301  KLNGAQLNYSTYDKELHALVRALKVWQHYLCPKQFVIHTDHESLKHLKGQTKLTRGMRNG 360
            KLNGAQLNYSTYDKELHALVRALKVWQHYL PK+FVIHTDHESLKHLKGQTKL +     
Sbjct: 899  KLNGAQLNYSTYDKELHALVRALKVWQHYLWPKEFVIHTDHESLKHLKGQTKLNKRHAKW 958

Query: 361  WNLLTHF-----------------------LMSSITKRV--------------------- 420
               +  F                       L SS++ +V                     
Sbjct: 959  VEFIETFPYVIHYKKGKDNMVADALSRRYALFSSLSAKVLGFKHMIELYKVEKSEFYDVY 1018

Query: 421  -----------RTIWWPMHYQEGKLCIPKCSIRELLVKEAHGGVLMGHFGEFKTYSMLCE 441
                         ++  M +++GKLCIPKCSIRELLVKEAHGG LMGHFGEFKTYS+LCE
Sbjct: 1019 AQCLEGKNVQDYIVFDGMLFRKGKLCIPKCSIRELLVKEAHGGGLMGHFGEFKTYSILCE 1078

[Close]

BLAST of Cmc11g0292901 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 8.7e-65
Identity = 138/365 (37.81%), Postives = 212/365 (58.08%), Query Frame = 0


Query: 1   MDKGYIRESMSPCSVLVILVPKKDGT-----WRMCVDCRAINKITVKYRHPIPRLDDMLD 60
           +++G IR S SP +  + +VPKK        +R+ +D R +N+ITV  RHPIP +D++L 
Sbjct: 231 LNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILG 290

Query: 61  ELHGANLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVM-------PNTW----- 120
           +L   N F+ IDL   +HQI M      K AF TK G YE+L M       P T+     
Sbjct: 291 KLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMN 350

Query: 121 --------KFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHF 180
                   K  +VY DDI+V+S  L++H+  L  +  KL +  L     KC F  ++  F
Sbjct: 351 DILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTF 410

Query: 181 LGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELV 240
           LG ++  DG+K + EK++AI+++P PT   E+++F GL  +YR+FI +F+ IA P+T+ +
Sbjct: 411 LGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCL 470

Query: 241 KKHVKFEWKGKQ-ENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQP 300
           KK++K +    + ++AF +LK    + P L +P+F K F +  DAS + +GAVL Q+  P
Sbjct: 471 KKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGHP 530

Query: 301 IMFFSEKLNGAQLNYSTYDKELHALVRALKVWQHYLCPKQFVIHTDHESLKHL----KGQ 336
           + + S  LN  ++NYST +KEL A+V A K ++HYL  + F I +DH+ L  L       
Sbjct: 531 LSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPN 590

[Close]

BLAST of Cmc11g0292901 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.1e-64
Identity = 139/353 (39.38%), Postives = 203/353 (57.51%), Query Frame = 0


Query: 1   MDKGYIRESMSPCSVLVILVPKKD-----GTWRMCVDCRAINKITVKYRHPIPRLDDMLD 60
           +++G IRES SP +    +VPKK        +R+ +D R +N+IT+  R+PIP +D++L 
Sbjct: 230 LNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILG 289

Query: 61  ELHGANLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVM-------PNTW----- 120
           +L     F+ IDL   +HQI M      K AF TK G YE+L M       P T+     
Sbjct: 290 KLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMN 349

Query: 121 --------KFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHF 180
                   K  +VY DDI+++S  L +H+  ++ +  KL +  L     KC F  ++ +F
Sbjct: 350 NILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANF 409

Query: 181 LGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELV 240
           LG IV  DG+K +  KVKAI  +P PT   E+R+F GL  +YR+FI +++ IA P+T  +
Sbjct: 410 LGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCL 469

Query: 241 KKHVKFE-WKGKQENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQP 300
           KK  K +  K +   AF +LK   I+ P L LP+F+K F +  DAS + +GAVL Q   P
Sbjct: 470 KKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHP 529

Query: 301 IMFFSEKLNGAQLNYSTYDKELHALVRALKVWQHYLCPKQFVIHTDHESLKHL 328
           I F S  LN  +LNYS  +KEL A+V A K ++HYL  +QF+I +DH+ L+ L
Sbjct: 530 ISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWL 582

[Close]

BLAST of Cmc11g0292901 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.3e-64
Identity = 130/351 (37.04%), Postives = 201/351 (57.26%), Query Frame = 0


Query: 1   MDKGYIRESMSPCSVLVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 60
           +  G IRES +  +  V+ VPKK+GT RM VD + +NK      +P+P ++ +L ++ G+
Sbjct: 436 LKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGS 495

Query: 61  NLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVMP--------------NT---- 120
            +F+K+DLKS YH IR+  GDE K+AF+   G++E+LVMP              NT    
Sbjct: 496 TIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGE 555

Query: 121 --WKFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 180
                VV Y DDIL++SK  ++H+ H+K +L KL+   L  N  KC F   Q+ F+G+ +
Sbjct: 556 AKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHI 615

Query: 181 GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 240
            + G    +E +  + +W  P N  E+R F G  ++ R+FI   S +  PL  L+KK V+
Sbjct: 616 SEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVR 675

Query: 241 FEWKGKQENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQ-----PI 300
           ++W   Q  A   +K+  +  P L   +F K   +E DAS + +GAVL Q+       P+
Sbjct: 676 WKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPV 735

Query: 301 MFFSEKLNGAQLNYSTYDKELHALVRALKVWQHYL--CPKQFVIHTDHESL 325
            ++S K++ AQLNYS  DKE+ A++++LK W+HYL    + F I TDH +L
Sbjct: 736 GYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

[Close]

BLAST of Cmc11g0292901 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.3e-64
Identity = 130/351 (37.04%), Postives = 201/351 (57.26%), Query Frame = 0


Query: 1   MDKGYIRESMSPCSVLVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 60
           +  G IRES +  +  V+ VPKK+GT RM VD + +NK      +P+P ++ +L ++ G+
Sbjct: 436 LKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGS 495

Query: 61  NLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVMP--------------NT---- 120
            +F+K+DLKS YH IR+  GDE K+AF+   G++E+LVMP              NT    
Sbjct: 496 TIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGE 555

Query: 121 --WKFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 180
                VV Y DDIL++SK  ++H+ H+K +L KL+   L  N  KC F   Q+ F+G+ +
Sbjct: 556 AKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHI 615

Query: 181 GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 240
            + G    +E +  + +W  P N  E+R F G  ++ R+FI   S +  PL  L+KK V+
Sbjct: 616 SEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVR 675

Query: 241 FEWKGKQENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQ-----PI 300
           ++W   Q  A   +K+  +  P L   +F K   +E DAS + +GAVL Q+       P+
Sbjct: 676 WKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPV 735

Query: 301 MFFSEKLNGAQLNYSTYDKELHALVRALKVWQHYL--CPKQFVIHTDHESL 325
            ++S K++ AQLNYS  DKE+ A++++LK W+HYL    + F I TDH +L
Sbjct: 736 GYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

[Close]

BLAST of Cmc11g0292901 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.3e-64
Identity = 130/351 (37.04%), Postives = 201/351 (57.26%), Query Frame = 0


Query: 1   MDKGYIRESMSPCSVLVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 60
           +  G IRES +  +  V+ VPKK+GT RM VD + +NK      +P+P ++ +L ++ G+
Sbjct: 436 LKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGS 495

Query: 61  NLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVMP--------------NT---- 120
            +F+K+DLKS YH IR+  GDE K+AF+   G++E+LVMP              NT    
Sbjct: 496 TIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGE 555

Query: 121 --WKFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 180
                VV Y DDIL++SK  ++H+ H+K +L KL+   L  N  KC F   Q+ F+G+ +
Sbjct: 556 AKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHI 615

Query: 181 GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 240
            + G    +E +  + +W  P N  E+R F G  ++ R+FI   S +  PL  L+KK V+
Sbjct: 616 SEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVR 675

Query: 241 FEWKGKQENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQ-----PI 300
           ++W   Q  A   +K+  +  P L   +F K   +E DAS + +GAVL Q+       P+
Sbjct: 676 WKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPV 735

Query: 301 MFFSEKLNGAQLNYSTYDKELHALVRALKVWQHYL--CPKQFVIHTDHESL 325
            ++S K++ AQLNYS  DKE+ A++++LK W+HYL    + F I TDH +L
Sbjct: 736 GYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

[Close]

BLAST of Cmc11g0292901 vs. ExPASy TrEMBL
Match: A0A5A7UZP1 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G001110 PE=4 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 1.2e-218
Identity = 385/462 (83.33%), Postives = 399/462 (86.36%), Query Frame = 0


Query: 1   MDKGYIRESMSPCSVLVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 60
           MDKGYIRESMSPCSV VILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA
Sbjct: 458 MDKGYIRESMSPCSVSVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 517

Query: 61  NLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVM-------PNTW---------- 120
           NLFSKIDLKSDYHQIRMHVGDEWK AFKTKFGLYEWLVM       P+T+          
Sbjct: 518 NLFSKIDLKSDYHQIRMHVGDEWKTAFKTKFGLYEWLVMSFGLTNAPSTFTRLMNHVLKE 577

Query: 121 ---KFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 180
              KFVVVYFDDILVYSKGLNDHILH+KTILLKLREEKLYANFKKC FCLEQIHFLGFIV
Sbjct: 578 YVGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCIFCLEQIHFLGFIV 637

Query: 181 GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 240
           GKDGVKVDEEKVKAI+EWPTPTNASEV SFHGLASFYRRFIKDFSSI SPLTELVKKHVK
Sbjct: 638 GKDGVKVDEEKVKAIQEWPTPTNASEVISFHGLASFYRRFIKDFSSITSPLTELVKKHVK 697

Query: 241 FEWKGKQENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 300
           FEWK KQENAFNELKEK IKAP LALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE
Sbjct: 698 FEWKEKQENAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 757

Query: 301 KLNGAQLNYSTYDKELHALVRALKVWQHYLCPKQFVIHTDHESLKHLKGQTKLTRGMRNG 360
           KLNGAQLNYSTYDKELHALVRALKVWQHYL PK+FVIHTDHESLKHLKGQTKL +     
Sbjct: 758 KLNGAQLNYSTYDKELHALVRALKVWQHYLWPKEFVIHTDHESLKHLKGQTKLNKRHAKW 817

Query: 361 WNLLTHFLMSSITKRVR--TIWWPMHYQEGKLCIPKCSIRELLVKEAHGGVLMGHFGEFK 420
              +  F      K+ +   +   +   +GKLCIPKCSIRE LVKEAHGG LMGHFGEFK
Sbjct: 818 VEFIETFPYVIHYKKGKDNMVADALSRWKGKLCIPKCSIRESLVKEAHGGGLMGHFGEFK 877

Query: 421 TYSMLCEHFYWLKMRKDVNKVCKQCFKCKEAKSNTTTWPLHT 441
           TYS+LCEHFYWLKMRKDVNKVCKQCFKCKEAKS T    L+T
Sbjct: 878 TYSILCEHFYWLKMRKDVNKVCKQCFKCKEAKSKTQPHGLYT 919

[Close]

BLAST of Cmc11g0292901 vs. ExPASy TrEMBL
Match: A0A5D3CK70 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00110 PE=4 SV=1)

HSP 1 Score: 767.7 bits (1981), Expect = 2.7e-218
Identity = 394/515 (76.50%), Postives = 409/515 (79.42%), Query Frame = 0


Query: 1    MDKGYIRESMSPCSVLVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 60
            MDKGYIRESMSPCSV VILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA
Sbjct: 599  MDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 658

Query: 61   NLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVM-------PNTW---------- 120
            NLFSKIDLKS YHQIRMHVGDEWK AFKTKFGLYEWLVM       P+T+          
Sbjct: 659  NLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKE 718

Query: 121  ---KFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 180
               KFVVVYFDDILVYSKGLNDHILH+KTILLKLREEKLYANFKKCSFCLEQIHFLGFIV
Sbjct: 719  YIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 778

Query: 181  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 240
            GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK
Sbjct: 779  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 838

Query: 241  FEWKGKQENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 300
            FEWK KQENAFNELKEK IKAP LALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE
Sbjct: 839  FEWKEKQENAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 898

Query: 301  KLNGAQLNYSTYDKELHALVRALKVWQHYLCPKQFVIHTDHESLKHLKGQTKLTRGMRNG 360
            KLNGAQLNYSTYDKELHALVRALKVWQHYL PK+FVIHTDHESLKHLKGQTKL +     
Sbjct: 899  KLNGAQLNYSTYDKELHALVRALKVWQHYLWPKEFVIHTDHESLKHLKGQTKLNKRHAKW 958

Query: 361  WNLLTHF-----------------------LMSSITKRV--------------------- 420
               +  F                       L SS++ +V                     
Sbjct: 959  VEFIETFPYVIHYKKGKDNMVADALSRRYALFSSLSAKVLGFKHMIELYKVEKSEFYDVY 1018

Query: 421  -----------RTIWWPMHYQEGKLCIPKCSIRELLVKEAHGGVLMGHFGEFKTYSMLCE 441
                         ++  M +++GKLCIPKCSIRELLVKEAHGG LMGHFGEFKTYSMLCE
Sbjct: 1019 AQCLEGKNVQDYIVFDGMLFRKGKLCIPKCSIRELLVKEAHGGGLMGHFGEFKTYSMLCE 1078

[Close]

BLAST of Cmc11g0292901 vs. ExPASy TrEMBL
Match: A0A5D3DGA7 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00150 PE=4 SV=1)

HSP 1 Score: 767.7 bits (1981), Expect = 2.7e-218
Identity = 394/515 (76.50%), Postives = 409/515 (79.42%), Query Frame = 0


Query: 1    MDKGYIRESMSPCSVLVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 60
            MDKGYIRESMSPCSV VILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA
Sbjct: 498  MDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 557

Query: 61   NLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVM-------PNTW---------- 120
            NLFSKIDLKS YHQIRMHVGDEWK AFKTKFGLYEWLVM       P+T+          
Sbjct: 558  NLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKE 617

Query: 121  ---KFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 180
               KFVVVYFDDILVYSKGLNDHILH+KTILLKLREEKLYANFKKCSFCLEQIHFLGFIV
Sbjct: 618  YIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 677

Query: 181  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 240
            GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK
Sbjct: 678  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 737

Query: 241  FEWKGKQENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 300
            FEWK KQENAFNELKEK IKAP LALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE
Sbjct: 738  FEWKEKQENAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 797

Query: 301  KLNGAQLNYSTYDKELHALVRALKVWQHYLCPKQFVIHTDHESLKHLKGQTKLTRGMRNG 360
            KLNGAQLNYSTYDKELHALVRALKVWQHYL PK+FVIHTDHESLKHLKGQTKL +     
Sbjct: 798  KLNGAQLNYSTYDKELHALVRALKVWQHYLWPKEFVIHTDHESLKHLKGQTKLNKRHAKW 857

Query: 361  WNLLTHF-----------------------LMSSITKRV--------------------- 420
               +  F                       L SS++ +V                     
Sbjct: 858  VEFIETFPYVIHYKKGKDNMVADALSRRYALFSSLSAKVLGFKHMIELYKVEKSEFYDVY 917

Query: 421  -----------RTIWWPMHYQEGKLCIPKCSIRELLVKEAHGGVLMGHFGEFKTYSMLCE 441
                         ++  M +++GKLCIPKCSIRELLVKEAHGG LMGHFGEFKTYSMLCE
Sbjct: 918  AQCLEGKNVQDYIVFDGMLFRKGKLCIPKCSIRELLVKEAHGGGLMGHFGEFKTYSMLCE 977

[Close]

BLAST of Cmc11g0292901 vs. ExPASy TrEMBL
Match: A0A5D3DRJ1 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00130 PE=4 SV=1)

HSP 1 Score: 766.1 bits (1977), Expect = 7.8e-218
Identity = 393/515 (76.31%), Postives = 409/515 (79.42%), Query Frame = 0


Query: 1    MDKGYIRESMSPCSVLVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 60
            MDKGYIRESMSPCSV VILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA
Sbjct: 599  MDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 658

Query: 61   NLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVM-------PNTW---------- 120
            NLFSKIDLKS YHQIRMHVGDEWK AFKTKFGLYEWLVM       P+T+          
Sbjct: 659  NLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKE 718

Query: 121  ---KFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 180
               KFVVVYFDDILVYSKGLNDHILH+KTILLKLREEKLYANFKKCSFCLEQIHFLGFIV
Sbjct: 719  YIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 778

Query: 181  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 240
            GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK
Sbjct: 779  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 838

Query: 241  FEWKGKQENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 300
            FEWK KQENAFNELKEK IKAP LALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE
Sbjct: 839  FEWKEKQENAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 898

Query: 301  KLNGAQLNYSTYDKELHALVRALKVWQHYLCPKQFVIHTDHESLKHLKGQTKLTRGMRNG 360
            KLNGAQLNYSTYDKELHALVRALKVWQHYL PK+FVIHTDHESLKHLKGQTKL +     
Sbjct: 899  KLNGAQLNYSTYDKELHALVRALKVWQHYLWPKEFVIHTDHESLKHLKGQTKLNKRHAKW 958

Query: 361  WNLLTHF-----------------------LMSSITKRV--------------------- 420
               +  F                       L SS++ +V                     
Sbjct: 959  VEFIETFPYVIHYKKGKDNMVADALSRRYALFSSLSAKVLGFKHMIELYKVEKSEFYDVY 1018

Query: 421  -----------RTIWWPMHYQEGKLCIPKCSIRELLVKEAHGGVLMGHFGEFKTYSMLCE 441
                         ++  M +++GKLCIPKCSIRELLVKEAHGG LMGHFGEFKTYS+LCE
Sbjct: 1019 AQCLEGKNVQDYIVFDGMLFRKGKLCIPKCSIRELLVKEAHGGGLMGHFGEFKTYSILCE 1078

[Close]

BLAST of Cmc11g0292901 vs. ExPASy TrEMBL
Match: A0A5D3BWE8 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00600 PE=4 SV=1)

HSP 1 Score: 766.1 bits (1977), Expect = 7.8e-218
Identity = 393/515 (76.31%), Postives = 409/515 (79.42%), Query Frame = 0


Query: 1    MDKGYIRESMSPCSVLVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 60
            MDKGYIRESMSPCSV VILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA
Sbjct: 599  MDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGA 658

Query: 61   NLFSKIDLKSDYHQIRMHVGDEWKMAFKTKFGLYEWLVM-------PNTW---------- 120
            NLFSKIDLKS YHQIRMHVGDEWK AFKTKFGLYEWLVM       P+T+          
Sbjct: 659  NLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKE 718

Query: 121  ---KFVVVYFDDILVYSKGLNDHILHLKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 180
               KFVVVYFDDILVYSKGLNDHILH+KTILLKLREEKLYANFKKCSFCLEQIHFLGFIV
Sbjct: 719  YIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIV 778

Query: 181  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 240
            GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK
Sbjct: 779  GKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVK 838

Query: 241  FEWKGKQENAFNELKEKFIKAPYLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 300
            FEWK KQENAFNELKEK IKAP LALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE
Sbjct: 839  FEWKEKQENAFNELKEKLIKAPCLALPNFDKSFEIECDASGIGIGAVLMQEKQPIMFFSE 898

Query: 301  KLNGAQLNYSTYDKELHALVRALKVWQHYLCPKQFVIHTDHESLKHLKGQTKLTRGMRNG 360
            KLNGAQLNYSTYDKELHALVRALKVWQHYL PK+FVIHTDHESLKHLKGQTKL +     
Sbjct: 899  KLNGAQLNYSTYDKELHALVRALKVWQHYLWPKEFVIHTDHESLKHLKGQTKLNKRHAKW 958

Query: 361  WNLLTHF-----------------------LMSSITKRV--------------------- 420
               +  F                       L SS++ +V                     
Sbjct: 959  VEFIETFPYVIHYKKGKDNMVADALSRRYALFSSLSAKVLGFKHMIELYKVEKSEFYDVY 1018

Query: 421  -----------RTIWWPMHYQEGKLCIPKCSIRELLVKEAHGGVLMGHFGEFKTYSMLCE 441
                         ++  M +++GKLCIPKCSIRELLVKEAHGG LMGHFGEFKTYS+LCE
Sbjct: 1019 AQCLEGKNVQDYIVFDGMLFRKGKLCIPKCSIRELLVKEAHGGGLMGHFGEFKTYSILCE 1078

[Close]

BLAST of Cmc11g0292901 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 1.8e-20
Identity = 53/130 (40.77%), Postives = 73/130 (56.15%), Query Frame = 0


Query: 126 HLKTILLKLREEKLYANFKKCSFCLEQIHFLG--FIVGKDGVKVDEEKVKAIREWPTPTN 185
           HL  +L    + + YAN KKC+F   QI +LG   I+  +GV  D  K++A+  WP P N
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 186 ASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVKFEWKGKQENAFNELKEKFIKAPY 245
            +E+R F GL  +YRRF+K++  I  PLTEL+KK+   +W      AF  LK      P 
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN-SLKWTEMAALAFKALKGAVTTLPV 122

Query: 246 LALPNFDKSF 254
           LALP+    F
Sbjct: 123 LALPDLKLPF 131

The following BLAST results are available for this feature:

BLAST of Cmc11g0292901 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059666.1	2.5e-218	83.33	Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK22420.1	5.5e-218	76.50	Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK11702.1	5.5e-218	76.50	F15O4.13 [Cucumis melo var. makuwa]	[more]
TYK26105.1	1.6e-217	76.31	F15O4.13 [Cucumis melo var. makuwa]	[more]
TYK02449.1	1.6e-217	76.31	F15O4.13 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0292901 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	8.7e-65	37.81	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.1e-64	39.38	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P0CT41	7.3e-64	37.04	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	7.3e-64	37.04	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	7.3e-64	37.04	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0292901 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZP1	1.2e-218	83.33	Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3CK70	2.7e-218	76.50	F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00110 PE=4 ...	[more]
A0A5D3DGA7	2.7e-218	76.50	Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3DRJ1	7.8e-218	76.31	F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00130 PE=4 ...	[more]
A0A5D3BWE8	7.8e-218	76.31	F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00600 PE=4...	[more]

BLAST of Cmc11g0292901 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.8e-20	40.77	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 354..429 e-value: 2.9E-15 score: 58.3
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 2..100 e-value: 3.1E-58 score: 198.5
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 3..349
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 3..349
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 254..347 e-value: 6.33141E-35 score: 124.142
None	No IPR available	CDD	cd01647	RT_LTR	coord: 4..160 e-value: 3.366E-66 score: 207.833
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 376..431 e-value: 8.0E-17 score: 61.1
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 105..160 e-value: 1.2E-9 score: 38.1 coord: 20..96 e-value: 1.7E-9 score: 37.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 169..254 e-value: 2.5E-31 score: 109.5
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 45..160 e-value: 3.1E-58 score: 198.5
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 223..317 e-value: 2.7E-32 score: 110.7
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..345

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0292901.1	Cmc11g0292901.1	mRNA