Cmc11g0292141 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0292141
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransmembrane protein 18
LocationCMiso1.1chr11: 7762921 .. 7765040 (-)
RNA-Seq ExpressionCmc11g0292141
SyntenyCmc11g0292141
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGTGAAAATTGATGAATGAAAGCTGAGGTTAAATTTAGGCTGAAAGTTGTCGCCAACAATAATTAGTGGAATTTTCCAGAGGGGTTTTAGAGAAAACGCCGTCCTTTCATAGCATCCGAGCTCGAGGTTTTGGGTCGAACAAGAACCGAAGATCAGAATTCGAAATCTATTATTGAATCTTTCGCATCCTTCGATTTCATATCTACTCATGGATGAGTTGAGATCTGCAATGGAGGAACACATGGACCAAATGTCGGATCTCATTCAGAAACTTTCATCCGAACTCCGATCCGGTCTCCGTCCCGCTCTTGATAATTTCATCGGCTTCTTCCACGCCATTGACTGGAAGGTAAAATCCCCATTAAAAAACTTTTATCTTCTTTTGTTCCATCCTTTTTCCTGCTCATTTTGAGTATTGTGTTTTATATATATTTTTTGACATTTTGCAGGAACCTTGGTTGATGGGGTTATTGGGGTTTCATGGATTGTTGCTGATAATAACTATCTTTACCAGGAAGCGTACCAACTTCCAGATGTTCTTGTTCCTTTTTGCACGTATGATCTTTTCTCCTATTTGCTCTTTTTGCTGAAATTTAATGACATTGTTCAAGGTTTTCCTATTTTGAGTTCTTTGATTGCTGTTCATATTGCATCCTGGCAAAGTAGTGAGTTTTGATCTAGTAATCAAGGTTAGAGATGAATTCTGAGGTGTGAATATCTTTTTGGAAATTATTTGCTGCATCAAGTTTGCAATTATGTAGTTGTGTTTGCATAATGTACAAATTGCATCCTCTGTACTGGGAAAGTAGTGAATTTTGCTCTAGTGGGTATGAATATATACTACCTCTTGAGCTTAGAGATGAACTCTGAGGTTTGAATGTATTTTTGGAGTCACTGCTGCAAGGTTGCAGTAATAAAATCATAGGATTACATTCGCTGCTTAAGTTGTTGATTAATGTTTCTTATGTTTTGTATGCTTTCAGACCATAGAACTGTTTGGTTTAACTTGGCTGCTTTTTGCTGACTATTTTAATTCAATAGATCTATCTCTCTTTCGGTCTCTTCCGGCTTCTTGTTAAAACTGTAAGATGTATGATCAAATGTTGTCAATGTATGATCCAATGTCGTCTATGTCATATATTTCTCAATTATCCTAGAAAGGAATCCCCTTGAGCACCACACAAATTATTGCATGCTTGTATGCTTGACTGTGGACACATTTCAGATTTACATTTTACATGTTGATGCCACTTTTCATGTATTTCAAGGAGAGGACACCCTTTTTTGCATTCCACAAAAAAATTTTCATGCTTGTTCACATTCATGTTTTGCAAGTTCATTCTCAACTTCAACTGTTCTTCATTTCTAGTGATAAGAAATCCATATTTGGAGTACTTACATTTTTGAATTTGTCATGCAGTGGCTGGTGTATATTTTGCTGAAGGAATCAATAAAATCTTGAGCAAAAACTGGAAGAAGTTTGCCACCCAAAACTATTTTGATCCAAATGGAGTTTTCCTATCAGCACTCTGGTGTGGGCCACTGCTTGTAATTTCAATGATAATCCTGGCAAGTTTTCGCTATTACTTGTTTTTGTCATGTCCCCGATGAGAACCCCCCATGAATTATTTCTCTTTCATTTATCTGTCGTGTAGTTTTTCGAGTTAAGAACACTTAACTGAACCATCATTTCTGTATGACAGATAAACACGCTCTTTACCTTATGCTATCTAGTAGTCAGGTGGAAAAGAGCTGAGCTTCGACATCGCGCAAGACTGTCACAGAGTAAAGAAGATTGACCTCATCAGATAAGTTTTTAGCTTTGATTTCTTTTGCTGGTAGCTTGTAGATCTGTATCTTTTCCTTCACAGAGGTCGTTGGAATTATAGGAATACAATGCTAGGAGCAGTTTTGTTCTCTTTTTTTATTTATTGACTAGAATCTACTTAGATATTGTTGCGATCAACTTTATACAACATTCTAGCTTGAATTTCATCAGTGAGTAATATTTTCAGTGATTACTGATTTTATTCACTGAATGTCTTTAATAATTATAGGACTACAATTAATATTTCTTCATCAAGGTTCAACTTTAGTATAGAAGGAAAATAACTTTTCT

mRNA sequence

TCGTGAAAATTGATGAATGAAAGCTGAGGTTAAATTTAGGCTGAAAGTTGTCGCCAACAATAATTAGTGGAATTTTCCAGAGGGGTTTTAGAGAAAACGCCGTCCTTTCATAGCATCCGAGCTCGAGGTTTTGGGTCGAACAAGAACCGAAGATCAGAATTCGAAATCTATTATTGAATCTTTCGCATCCTTCGATTTCATATCTACTCATGGATGAGTTGAGATCTGCAATGGAGGAACACATGGACCAAATGTCGGATCTCATTCAGAAACTTTCATCCGAACTCCGATCCGGTCTCCGTCCCGCTCTTGATAATTTCATCGGCTTCTTCCACGCCATTGACTGGAAGGAACCTTGGTTGATGGGGTTATTGGGGTTTCATGGATTGTTGCTGATAATAACTATCTTTACCAGGAAGCGTACCAACTTCCAGATGTTCTTGTTCCTTTTTGCACTGGCTGGTGTATATTTTGCTGAAGGAATCAATAAAATCTTGAGCAAAAACTGGAAGAAGTTTGCCACCCAAAACTATTTTGATCCAAATGGAGTTTTCCTATCAGCACTCTGGTGTGGGCCACTGCTTGTAATTTCAATGATAATCCTGATAAACACGCTCTTTACCTTATGCTATCTAGTAGTCAGGTGGAAAAGAGCTGAGCTTCGACATCGCGCAAGACTGTCACAGAGTAAAGAAGATTGACCTCATCAGATAAGTTTTTAGCTTTGATTTCTTTTGCTGGTAGCTTGTAGATCTGTATCTTTTCCTTCACAGAGGTCGTTGGAATTATAGGAATACAATGCTAGGAGCAGTTTTGTTCTCTTTTTTTATTTATTGACTAGAATCTACTTAGATATTGTTGCGATCAACTTTATACAACATTCTAGCTTGAATTTCATCAGTGAGTAATATTTTCAGTGATTACTGATTTTATTCACTGAATGTCTTTAATAATTATAGGACTACAATTAATATTTCTTCATCAAGGTTCAACTTTAGTATAGAAGGAAAATAACTTTTCT

Coding sequence (CDS)

ATGGATGAGTTGAGATCTGCAATGGAGGAACACATGGACCAAATGTCGGATCTCATTCAGAAACTTTCATCCGAACTCCGATCCGGTCTCCGTCCCGCTCTTGATAATTTCATCGGCTTCTTCCACGCCATTGACTGGAAGGAACCTTGGTTGATGGGGTTATTGGGGTTTCATGGATTGTTGCTGATAATAACTATCTTTACCAGGAAGCGTACCAACTTCCAGATGTTCTTGTTCCTTTTTGCACTGGCTGGTGTATATTTTGCTGAAGGAATCAATAAAATCTTGAGCAAAAACTGGAAGAAGTTTGCCACCCAAAACTATTTTGATCCAAATGGAGTTTTCCTATCAGCACTCTGGTGTGGGCCACTGCTTGTAATTTCAATGATAATCCTGATAAACACGCTCTTTACCTTATGCTATCTAGTAGTCAGGTGGAAAAGAGCTGAGCTTCGACATCGCGCAAGACTGTCACAGAGTAAAGAAGATTGA

Protein sequence

MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Homology
[Close]
BLAST of Cmc11g0292141 vs. NCBI nr
Match: XP_008462809.1 (PREDICTED: transmembrane protein 18 [Cucumis melo] >KAA0066328.1 transmembrane protein 18 [Cucumis melo var. makuwa] >TYK00951.1 transmembrane protein 18 [Cucumis melo var. makuwa])

HSP 1 Score: 327.4 bits (838), Expect = 7.0e-86
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
           CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Sbjct: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 163

[Close]
BLAST of Cmc11g0292141 vs. NCBI nr
Match: XP_011650049.1 (transmembrane protein 18 [Cucumis sativus] >KGN63345.1 hypothetical protein Csa_021882 [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 5.2e-81
Identity = 157/163 (96.32%), Postives = 157/163 (96.32%), Query Frame = 0 

Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           MDELRS MEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRKRTNFQMFLFL ALAGVYFAE IN ILSKNWK FATQNYFDPNGVFLSALW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLLALAGVYFAEIINGILSKNWKNFATQNYFDPNGVFLSALW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Sbjct: 121 SGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 163

[Close]
BLAST of Cmc11g0292141 vs. NCBI nr
Match: XP_038900756.1 (transmembrane protein 18 [Benincasa hispida])

HSP 1 Score: 307.8 bits (787), Expect = 5.7e-80
Identity = 151/163 (92.64%), Postives = 159/163 (97.55%), Query Frame = 0 

Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+ELRSAMEEHMDQM+DLIQK+SSELRSG+RPA+DNF+GFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MEELRSAMEEHMDQMADLIQKISSELRSGIRPAVDNFVGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRKRTNFQMFLFL ALAGVYFAE IN+ILSKNWK FATQNYFDPNGVFLSALW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSALW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLFTLC+LVVRWKRAELRHRARLSQSKED
Sbjct: 121 SGPLLVISMIILINTLFTLCFLVVRWKRAELRHRARLSQSKED 163

[Close]
BLAST of Cmc11g0292141 vs. NCBI nr
Match: XP_022949841.1 (transmembrane protein 18 [Cucurbita moschata] >XP_022978303.1 transmembrane protein 18 [Cucurbita maxima] >KAG6603481.1 Transmembrane protein 18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78
Identity = 150/163 (92.02%), Postives = 157/163 (96.32%), Query Frame = 0 

Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+ELRSAMEEHMDQM+DL+QKLSSELRSGLRPA+DNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRK TNFQMFLFL ALAGVYFAE IN+ILSKNWK FATQNYFDPNGVFLS LW
Sbjct: 61  LLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLFTLCYLVVRWKRAELR+RARLSQ+KED
Sbjct: 121 SGPLLVISMIILINTLFTLCYLVVRWKRAELRNRARLSQTKED 163

[Close]
BLAST of Cmc11g0292141 vs. NCBI nr
Match: XP_023543279.1 (transmembrane protein 18 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.0 bits (772), Expect = 3.1e-78
Identity = 149/163 (91.41%), Postives = 157/163 (96.32%), Query Frame = 0 

Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+ELRSAMEEHMDQM+DL+QKLSSELRSGLRPA+DNFIGFFHAIDWKEPWL+GLLGFHGL
Sbjct: 1   MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLIGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRK TNFQMFLFL ALAGVYFAE IN+ILSKNWK FATQNYFDPNGVFLS LW
Sbjct: 61  LLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLL+ISMIILINTLFTLCYLVVRWKRAELR+RARLSQSKED
Sbjct: 121 SGPLLLISMIILINTLFTLCYLVVRWKRAELRNRARLSQSKED 163

[Close]
BLAST of Cmc11g0292141 vs. ExPASy Swiss-Prot
Match: Q6DGF8 (Transmembrane protein 18 OS=Rattus norvegicus OX=10116 GN=Tmem18 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.1e-16
Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 0 

Query: 45  DWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFA 104
           DW EPWL+GLL FH L L++T F+ +R   Q+  FL  +  VY AE IN++ + NW+ FA
Sbjct: 22  DWTEPWLLGLLAFHLLCLLLTCFSAQRYKLQIGHFLCLVVLVYCAEYINEVAAMNWRLFA 81

Query: 105 TQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
              YFD  G+F+S ++  PLL  +M+I+I  +     ++   K  + R + R  + KE+
Sbjct: 82  KYQYFDSRGMFISLVFSAPLLFNAMVIVIMWVRKTLTVMSDLKNLQERRKERKRRRKEE 140

[Close]
BLAST of Cmc11g0292141 vs. ExPASy Swiss-Prot
Match: Q5F410 (Transmembrane protein 18 OS=Gallus gallus OX=9031 GN=TMEM18 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.1e-16
Identity = 43/117 (36.75%), Postives = 70/117 (59.83%), Query Frame = 0 

Query: 45  DWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFA 104
           DW EPWL+GL GFH L  ++T F+ +    Q+  FL  +  VY AE IN++ + NW+ F+
Sbjct: 26  DWAEPWLLGLAGFHVLCFLLTCFSFQHYRVQIGHFLCMVCLVYCAEYINELAAMNWRLFS 85

Query: 105 TQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSK 162
              YFD  G+F+S ++  PLLV ++II++N ++    ++   K  + R +A   + K
Sbjct: 86  KYQYFDSRGMFISLVFSAPLLVNTIIIVVNWVYRTLNVMTELKTLQQRIKAEKDKKK 142

[Close]
BLAST of Cmc11g0292141 vs. ExPASy Swiss-Prot
Match: Q96B42 (Transmembrane protein 18 OS=Homo sapiens OX=9606 GN=TMEM18 PE=1 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 7.9e-16
Identity = 44/119 (36.97%), Postives = 70/119 (58.82%), Query Frame = 0 

Query: 45  DWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFA 104
           DW EPWLMGL  FH L +++T  + +    Q+  FL  +  VY AE IN+  + NW+ F+
Sbjct: 22  DWTEPWLMGLATFHALCVLLTCLSSRSYRLQIGHFLCLVILVYCAEYINEAAAMNWRLFS 81

Query: 105 TQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
              YFD  G+F+S ++  PLLV +MII++  ++    ++   K A+ R + +  + KED
Sbjct: 82  KYQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNVMTDLKNAQERRKEKKRRRKED 140

[Close]
BLAST of Cmc11g0292141 vs. ExPASy Swiss-Prot
Match: Q3SZ36 (Transmembrane protein 18 OS=Bos taurus OX=9913 GN=TMEM18 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-15
Identity = 45/112 (40.18%), Postives = 69/112 (61.61%), Query Frame = 0 

Query: 45  DWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFA 104
           DW EPWL+GL GFH L L++T F+ +R   Q+  FL  +  VY AE IN++ + NW+ F+
Sbjct: 22  DWTEPWLVGLAGFHVLCLLLTCFSSQRYRLQVGHFLCLVTLVYCAEYINEVAAMNWRLFS 81

Query: 105 TQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRAR 157
              YFD  G+F+S ++  PLL+ +++I++  L+    LVV      LR + R
Sbjct: 82  KHQYFDSRGMFISLVFSAPLLLNALVIVV--LWVRKTLVVMTDLRSLREQRR 131

[Close]
BLAST of Cmc11g0292141 vs. ExPASy Swiss-Prot
Match: Q3TUD9 (Transmembrane protein 18 OS=Mus musculus OX=10090 GN=Tmem18 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-15
Identity = 44/119 (36.97%), Postives = 70/119 (58.82%), Query Frame = 0 

Query: 45  DWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFA 104
           DW EPWL+GLL FH L L++T F+ +R   Q+  FL  +  VY AE IN++ + NW+ F+
Sbjct: 22  DWTEPWLLGLLAFHLLCLLLTCFSSQRYKLQIGHFLCLVVLVYSAEYINEVAAVNWRLFS 81

Query: 105 TQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
              YFD  G+F+S ++  PLL  +M+I+I  +     ++   K  +   + R  + KE+
Sbjct: 82  KYQYFDSRGMFISLVFSAPLLFNAMLIVIMWVRKTLTVMTDLKTLQEERKERRRRRKEE 140

[Close]
BLAST of Cmc11g0292141 vs. ExPASy TrEMBL
Match: A0A5A7VF36 (Transmembrane protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001270 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.4e-86
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
           CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Sbjct: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 163

[Close]
BLAST of Cmc11g0292141 vs. ExPASy TrEMBL
Match: A0A1S3CHQ8 (Transmembrane protein 18 OS=Cucumis melo OX=3656 GN=LOC103501090 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.4e-86
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
           CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Sbjct: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 163

[Close]
BLAST of Cmc11g0292141 vs. ExPASy TrEMBL
Match: A0A0A0LN62 (Transmembrane protein 18 OS=Cucumis sativus OX=3659 GN=Csa_2G431140 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.5e-81
Identity = 157/163 (96.32%), Postives = 157/163 (96.32%), Query Frame = 0 

Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           MDELRS MEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRKRTNFQMFLFL ALAGVYFAE IN ILSKNWK FATQNYFDPNGVFLSALW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLLALAGVYFAEIINGILSKNWKNFATQNYFDPNGVFLSALW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Sbjct: 121 SGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 163

[Close]
BLAST of Cmc11g0292141 vs. ExPASy TrEMBL
Match: A0A6J1ISM9 (Transmembrane protein 18 OS=Cucurbita maxima OX=3661 GN=LOC111478331 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.2e-79
Identity = 150/163 (92.02%), Postives = 157/163 (96.32%), Query Frame = 0 

Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+ELRSAMEEHMDQM+DL+QKLSSELRSGLRPA+DNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRK TNFQMFLFL ALAGVYFAE IN+ILSKNWK FATQNYFDPNGVFLS LW
Sbjct: 61  LLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLFTLCYLVVRWKRAELR+RARLSQ+KED
Sbjct: 121 SGPLLVISMIILINTLFTLCYLVVRWKRAELRNRARLSQTKED 163

[Close]
BLAST of Cmc11g0292141 vs. ExPASy TrEMBL
Match: A0A6J1GD63 (Transmembrane protein 18 OS=Cucurbita moschata OX=3662 GN=LOC111453119 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.2e-79
Identity = 150/163 (92.02%), Postives = 157/163 (96.32%), Query Frame = 0 

Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+ELRSAMEEHMDQM+DL+QKLSSELRSGLRPA+DNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRK TNFQMFLFL ALAGVYFAE IN+ILSKNWK FATQNYFDPNGVFLS LW
Sbjct: 61  LLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLFTLCYLVVRWKRAELR+RARLSQ+KED
Sbjct: 121 SGPLLVISMIILINTLFTLCYLVVRWKRAELRNRARLSQTKED 163

[Close]
BLAST of Cmc11g0292141 vs. TAIR 10
Match: AT1G34350.1 (unknown protein; Has 192 Blast hits to 192 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). )

HSP 1 Score: 251.5 bits (641), Expect = 4.5e-67
Identity = 115/163 (70.55%), Postives = 143/163 (87.73%), Query Frame = 0 

Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+E+RSAME+ +D ++DL++KLS ELR+G +PA DNF+GFFHAIDWKEPW+MGL+ FH L
Sbjct: 1   MEEIRSAMEKQVDLVADLVEKLSGELRTGFQPAYDNFLGFFHAIDWKEPWIMGLMAFHAL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LL++T+ +R+  NF MFLFL ALAGVYFAE +N+ L KNWK F+TQNYFD NGVFLS LW
Sbjct: 61  LLLVTLLSRRHLNFHMFLFLLALAGVYFAENLNRELRKNWKSFSTQNYFDSNGVFLSTLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVI+MIILINTLF+LCYL+V+WKRAELRHRARL+ +KE+
Sbjct: 121 SGPLLVIAMIILINTLFSLCYLIVKWKRAELRHRARLAHTKEE 163

[Close]
BLAST of Cmc11g0292141 vs. TAIR 10
Match: AT1G34350.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages. )

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-62
Identity = 114/188 (60.64%), Postives = 143/188 (76.06%), Query Frame = 0 

Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+E+RSAME+ +D ++DL++KLS ELR+G +PA DNF+GFFHAIDWKEPW+MGL+ FH L
Sbjct: 1   MEEIRSAMEKQVDLVADLVEKLSGELRTGFQPAYDNFLGFFHAIDWKEPWIMGLMAFHAL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFA-------------------------LAGVYFAEGINKI 120
           LL++T+ +R+  NF MFLFL A                         +AGVYFAE +N+ 
Sbjct: 61  LLLVTLLSRRHLNFHMFLFLLACKFPLKLSIYILYKKSLRSNDLTSLVAGVYFAENLNRE 120

Query: 121 LSKNWKKFATQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRA 164
           L KNWK F+TQNYFD NGVFLS LW GPLLVI+MIILINTLF+LCYL+V+WKRAELRHRA
Sbjct: 121 LRKNWKSFSTQNYFDSNGVFLSTLWSGPLLVIAMIILINTLFSLCYLIVKWKRAELRHRA 180

The following BLAST results are available for this feature:
BLAST of Cmc11g0292141 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008462809.17.0e-86100.00PREDICTED: transmembrane protein 18 [Cucumis melo] >KAA0066328.1 transmembrane p... [more]
XP_011650049.15.2e-8196.32transmembrane protein 18 [Cucumis sativus] >KGN63345.1 hypothetical protein Csa_... [more]
XP_038900756.15.7e-8092.64transmembrane protein 18 [Benincasa hispida][more]
XP_022949841.11.1e-7892.02transmembrane protein 18 [Cucurbita moschata] >XP_022978303.1 transmembrane prot... [more]
XP_023543279.13.1e-7891.41transmembrane protein 18 [Cucurbita pepo subsp. pepo][more]
BLAST of Cmc11g0292141 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6DGF82.1e-1638.66Transmembrane protein 18 OS=Rattus norvegicus OX=10116 GN=Tmem18 PE=2 SV=1[more]
Q5F4106.1e-1636.75Transmembrane protein 18 OS=Gallus gallus OX=9031 GN=TMEM18 PE=2 SV=1[more]
Q96B427.9e-1636.97Transmembrane protein 18 OS=Homo sapiens OX=9606 GN=TMEM18 PE=1 SV=2[more]
Q3SZ362.3e-1540.18Transmembrane protein 18 OS=Bos taurus OX=9913 GN=TMEM18 PE=2 SV=1[more]
Q3TUD92.3e-1536.97Transmembrane protein 18 OS=Mus musculus OX=10090 GN=Tmem18 PE=2 SV=1[more]
BLAST of Cmc11g0292141 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VF363.4e-86100.00Transmembrane protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3CHQ83.4e-86100.00Transmembrane protein 18 OS=Cucumis melo OX=3656 GN=LOC103501090 PE=3 SV=1[more]
A0A0A0LN622.5e-8196.32Transmembrane protein 18 OS=Cucumis sativus OX=3659 GN=Csa_2G431140 PE=3 SV=1[more]
A0A6J1ISM95.2e-7992.02Transmembrane protein 18 OS=Cucurbita maxima OX=3661 GN=LOC111478331 PE=3 SV=1[more]
A0A6J1GD635.2e-7992.02Transmembrane protein 18 OS=Cucurbita moschata OX=3662 GN=LOC111453119 PE=3 SV=1[more]
BLAST of Cmc11g0292141 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G34350.14.5e-6770.55unknown protein; Has 192 Blast hits to 192 proteins in 79 species: Archae - 0; B... [more]
AT1G34350.21.5e-6260.64unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..25
NoneNo IPR availablePANTHERPTHR22593TRANSMEMBRANE PROTEIN 18coord: 2..161
NoneNo IPR availablePANTHERPTHR22593:SF2TRANSMEMBRANE PROTEIN 18coord: 2..161
IPR026721Transmembrane protein 18PFAMPF14770TMEM18coord: 39..156
e-value: 9.7E-45
score: 151.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0292141.1Cmc11g0292141.1mRNA