Cmc11g0292021 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0292021
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	CMiso1.1chr11: 7601536 .. 7602270 (-)
RNA-Seq Expression	Cmc11g0292021
Synteny	Cmc11g0292021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGTGGCCTTTTACTATCTGCTCATCAAGGTAAATCTTTTCATGACACTTGCATGTATCGTGGTGCAGTTGGAGCTTTACAATATGCAACTCTTACTCATCCTGAGAAATCCTATAGTGTAAACAAAGCATGTCAATTCATGCATTCTCCTAAACTTACTCATTGGCAACTTGTGAAACACATTCTGAGGTATCTTAAAGGTGTTTTATCTCATGGATTGCGGCTTAAACATTCTAACAACTTATCTCTTGTTGGTTTTGTTGATGTCGACTAGGCATCTGACCTCGTTGATAGAAAGTCATCTTCAGGCTTTTGTGTTTATTTTGACAACAATTTAGTCTCTTGGGGATCAAAGAAACAGTCAATTATTTTCAGATCTAGCATTGCAGTAGAGTATCGGTGTCTTGCACTTCTTGCTATTGAACTGGTATGGATTTGCTCACTGTTATTTGATTTATGTATTAATATACCTCGTTCTCCTTTTCTATGGTGTGATAATCTAAGTGCAGTCCACTTAAGTGAAAACCCAATATTACATTCCAAAATAAAACATGTAGAGCTTGATATGTACTTTGTTCGAGATTTGATACAAAAGAAGAAGATCATAGTTCGTTACCTTTCAGCTTCAGAACAGATAACTAATGTTCGTACCAAACCAACGTATGCTACAAACTTTCAAAAGCTAAACAATAAGCTCACTATTGTTGATTCCACAATCATTGGTTTGTAG

mRNA sequence

ATGGTAAGTGGCCTTTTACTATCTGCTCATCAAGGTAAATCTTTTCATGACACTTGCATGTATCGTGGTGCAGTTGGAGCTTTACAATATGCAACTCTTACTCATCCTGAGAAATCCTATAGTGTAAACAAAGCATGTCAATTCATGCATTCTCCTAAACTTACTCATTGGCAACTTGTGAAACACATTCTGAGGTATCTTAAAGGTGTTTTATCTCATGGATTGCGGCTTAAACATTCTAACAACTTATCTCTTGTTGGTTTTGTTGATTCAATTATTTTCAGATCTAGCATTGCAGTAGAGTATCGGTGTCTTGCACTTCTTGCTATTGAACTGGTATGGATTTGCTCACTGTTATTTGATTTATGTATTAATATACCTCGTTCTCCTTTTCTATGGTGTGATAATCTAAGTGCAGTCCACTTAAGTGAAAACCCAATATTACATTCCAAAATAAAACATGTAGAGCTTGATATGTACTTTGTTCGAGATTTGATACAAAAGAAGAAGATCATAGTTCGTTACCTTTCAGCTTCAGAACAGATAACTAATGTTCGTACCAAACCAACGTATGCTACAAACTTTCAAAAGCTAAACAATAAGCTCACTATTGTTGATTCCACAATCATTGGTTTGTAG

Coding sequence (CDS)

ATGGTAAGTGGCCTTTTACTATCTGCTCATCAAGGTAAATCTTTTCATGACACTTGCATGTATCGTGGTGCAGTTGGAGCTTTACAATATGCAACTCTTACTCATCCTGAGAAATCCTATAGTGTAAACAAAGCATGTCAATTCATGCATTCTCCTAAACTTACTCATTGGCAACTTGTGAAACACATTCTGAGGTATCTTAAAGGTGTTTTATCTCATGGATTGCGGCTTAAACATTCTAACAACTTATCTCTTGTTGGTTTTGTTGATTCAATTATTTTCAGATCTAGCATTGCAGTAGAGTATCGGTGTCTTGCACTTCTTGCTATTGAACTGGTATGGATTTGCTCACTGTTATTTGATTTATGTATTAATATACCTCGTTCTCCTTTTCTATGGTGTGATAATCTAAGTGCAGTCCACTTAAGTGAAAACCCAATATTACATTCCAAAATAAAACATGTAGAGCTTGATATGTACTTTGTTCGAGATTTGATACAAAAGAAGAAGATCATAGTTCGTTACCTTTCAGCTTCAGAACAGATAACTAATGTTCGTACCAAACCAACGTATGCTACAAACTTTCAAAAGCTAAACAATAAGCTCACTATTGTTGATTCCACAATCATTGGTTTGTAG

Protein sequence

MVSGLLLSAHQGKSFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGVLSHGLRLKHSNNLSLVGFVDSIIFRSSIAVEYRCLALLAIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPILHSKIKHVELDMYFVRDLIQKKKIIVRYLSASEQITNVRTKPTYATNFQKLNNKLTIVDSTIIGL

Homology

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BLAST of Cmc11g0292021 vs. NCBI nr
Match: KAA0052371.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK09417.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 272.7 bits (696), Expect = 2.7e-69
Identity = 149/244 (61.07%), Postives = 169/244 (69.26%), Query Frame = 0


Query: 1   MVSGLLLSAHQGKSFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLV 60
           MVSG LLSA QG+ FHD  + R  VGALQYATLTHPE SYSVNKACQFMH+PK THWQLV
Sbjct: 254 MVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLV 313

Query: 61  KHILRYLKGVLSHGLRLKHSNNLSLVGFVD------------------------------ 120
           K ILRYLKGVL HGL L  S+N SLVGF D                              
Sbjct: 314 KRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSK 373

Query: 121 --SIIFRSSIAVEYRCLALLAIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPIL 180
             SII RSS   EYRCLALLA E+VWI SLL DL I++P  P L CDNLSAVH S NPIL
Sbjct: 374 KQSIISRSSTEAEYRCLALLATEMVWIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPIL 433

Query: 181 HSKIKHVELDMYFVRDLIQKKKIIVRYLSASEQITNVRTKPTYATNFQKLNNKLTIVDST 213
           HSK KHVELD+YFVRDLI+K+K+ VR+L A+EQI ++ TKP  A +F KL N +T++DS 
Sbjct: 434 HSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNITVIDSA 493

[Close]

BLAST of Cmc11g0292021 vs. NCBI nr
Match: KAA0063213.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 270.8 bits (691), Expect = 1.0e-68
Identity = 151/244 (61.89%), Postives = 168/244 (68.85%), Query Frame = 0


Query: 1   MVSGLLLSAHQGKSFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLV 60
           MVSG LLSA QG+ FHD  +YR  VGALQYATLTHPE SYSVNKACQF+H+PK THWQLV
Sbjct: 11  MVSGPLLSAFQGELFHDVHLYRSIVGALQYATLTHPEISYSVNKACQFIHTPKHTHWQLV 70

Query: 61  KHILRYLKGVLSHGLRLKHSNNLSLVGFVD------------------------------ 120
           K ILRYLKGVL H L L  S+N+SL GFVD                              
Sbjct: 71  KKILRYLKGVLYHALWLSKSDNMSLDGFVDADWASDPDDRKSTSGFCVYFGNNLVSWGSK 130

Query: 121 --SIIFRSSIAVEYRCLALLAIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPIL 180
             SII RSS   EYRCL LLA ELVWI SLL DL I++P  P LWCDNLSAVHLS N IL
Sbjct: 131 KQSIIDRSSTKAEYRCLTLLATELVWIRSLLNDLYIDLPFPPILWCDNLSAVHLSANSIL 190

Query: 181 HSKIKHVELDMYFVRDLIQKKKIIVRYLSASEQITNVRTKPTYATNFQKLNNKLTIVDST 213
           HS  KHVELD+YFVRDLIQK K+ +R+LSA+EQI ++ TKP  A +  KL NKLT+VDS 
Sbjct: 191 HSTTKHVELDIYFVRDLIQKGKLFIRHLSATEQIADILTKPLSAQSSHKLKNKLTVVDSA 250

[Close]

BLAST of Cmc11g0292021 vs. NCBI nr
Match: XP_016903397.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 1.0e-68
Identity = 151/244 (61.89%), Postives = 168/244 (68.85%), Query Frame = 0


Query: 1   MVSGLLLSAHQGKSFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLV 60
           MVSG LLSA QG+ FHD  +YR  VGALQYATLTHPE SYSVNKACQF+H+PK THWQLV
Sbjct: 70  MVSGPLLSAFQGELFHDVHLYRSIVGALQYATLTHPEISYSVNKACQFIHTPKHTHWQLV 129

Query: 61  KHILRYLKGVLSHGLRLKHSNNLSLVGFVD------------------------------ 120
           K ILRYLKGVL H L L  S+N+SL GFVD                              
Sbjct: 130 KKILRYLKGVLYHALWLSKSDNMSLDGFVDADWASDPDDRKSTSGFCVYFGNNLVSWGSK 189

Query: 121 --SIIFRSSIAVEYRCLALLAIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPIL 180
             SII RSS   EYRCL LLA ELVWI SLL DL I++P  P LWCDNLSAVHLS N IL
Sbjct: 190 KQSIIDRSSTKAEYRCLTLLATELVWIRSLLNDLYIDLPFPPILWCDNLSAVHLSANSIL 249

Query: 181 HSKIKHVELDMYFVRDLIQKKKIIVRYLSASEQITNVRTKPTYATNFQKLNNKLTIVDST 213
           HS  KHVELD+YFVRDLIQK K+ +R+LSA+EQI ++ TKP  A +  KL NKLT+VDS 
Sbjct: 250 HSTTKHVELDIYFVRDLIQKGKLFIRHLSATEQIADILTKPLSAQSSHKLKNKLTVVDSA 309

[Close]

BLAST of Cmc11g0292021 vs. NCBI nr
Match: KAA0048296.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK10641.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 269.6 bits (688), Expect = 2.3e-68
Identity = 146/233 (62.66%), Postives = 163/233 (69.96%), Query Frame = 0


Query: 12  GKSFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGVL 71
           G+ FHD  +YR  VGALQYATLTHPE SYSVNKACQFMH+PK THWQLVK ILRYLKGVL
Sbjct: 98  GEPFHDVHLYRSIVGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLVKRILRYLKGVL 157

Query: 72  SHGLRLKHSNNLSLVGFVD--------------------------------SIIFRSSIA 131
            HGL  + S+N+SLVGF D                                SII RSS  
Sbjct: 158 YHGLWFRKSDNMSLVGFADADWASDPDDRKSTSGFYVYFGNNLVSWGSKKHSIISRSSTE 217

Query: 132 VEYRCLALLAIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPILHSKIKHVELDM 191
            EYRCLALLA ELVWI SLL DL I++P  P LWCDNLSAVHLS NPILHSK KHVELD+
Sbjct: 218 AEYRCLALLATELVWIRSLLNDLYIDLPFPPILWCDNLSAVHLSANPILHSKTKHVELDI 277

Query: 192 YFVRDLIQKKKIIVRYLSASEQITNVRTKPTYATNFQKLNNKLTIVDSTIIGL 213
           YFVRDLIQK K+ VR+L A+EQI ++ TKP  A +F  L NKLT++DST IGL
Sbjct: 278 YFVRDLIQKGKLAVRHLPATEQIADILTKPLSAQSFHTLKNKLTVIDSTAIGL 330

[Close]

BLAST of Cmc11g0292021 vs. NCBI nr
Match: KAA0059238.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 257.3 bits (656), Expect = 1.2e-64
Identity = 142/233 (60.94%), Postives = 159/233 (68.24%), Query Frame = 0


Query: 12  GKSFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGVL 71
           G+ FHD  +YR  VGALQYATLTHPE SYSVNKACQF+H+PK THWQLVK ILRYLKGVL
Sbjct: 190 GELFHDVHLYRSVVGALQYATLTHPEISYSVNKACQFIHTPKHTHWQLVKRILRYLKGVL 249

Query: 72  SHGLRLKHSNNLSLVGFVD--------------------------------SIIFRSSIA 131
            H L L  S+N+SL GFVD                                SII RSS  
Sbjct: 250 YHALWLSKSDNMSLDGFVDADWASDSDDRKSTSGFCVYFGNNLVSWGSKKQSIIDRSSTK 309

Query: 132 VEYRCLALLAIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPILHSKIKHVELDM 191
            EYRCL LLA ELVWI SLL DL I++P  P LWCDNLSAVHLS N ILHS  KHVELD+
Sbjct: 310 AEYRCLTLLATELVWIRSLLNDLYIDLPFPPILWCDNLSAVHLSANSILHSTTKHVELDI 369

Query: 192 YFVRDLIQKKKIIVRYLSASEQITNVRTKPTYATNFQKLNNKLTIVDSTIIGL 213
           YFVRDLIQK K+ VR+LSA+EQI ++ TKP  A +  KL NKLT++DS  IGL
Sbjct: 370 YFVRDLIQKGKLFVRHLSATEQIADILTKPLSAQSSHKLKNKLTVIDSASIGL 422

[Close]

BLAST of Cmc11g0292021 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.4e-36
Identity = 83/237 (35.02%), Postives = 122/237 (51.48%), Query Frame = 0


Query: 1    MVSGLLLSAHQGKSFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLV 60
            M +   L+ H G    D   YRG VG+LQY   T P+ SY+VN+  Q+MH P   HW  +
Sbjct: 1208 MATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNAL 1267

Query: 61   KHILRYLKGVLSHGLRLKHSNNLSLVGFVDSI---------------------------- 120
            K +LRYL G   HG+ LK  N LSL  + D+                             
Sbjct: 1268 KRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSK 1327

Query: 121  ----IFRSSIAVEYRCLALLAIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPIL 180
                + RSS   EYR +A  + EL WICSLL +L I +   P ++CDN+ A +L  NP+ 
Sbjct: 1328 KQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVF 1387

Query: 181  HSKIKHVELDMYFVRDLIQKKKIIVRYLSASEQITNVRTKPTYATNFQKLNNKLTIV 206
            HS++KH+ LD +F+R+ +Q   + V ++S  +Q+ +  TKP     FQ  + K+ ++
Sbjct: 1388 HSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVI 1444

[Close]

BLAST of Cmc11g0292021 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35
Identity = 84/230 (36.52%), Postives = 122/230 (53.04%), Query Frame = 0


Query: 7    LSAHQGKSFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRY 66
            LS + G    D   YRG VG+LQY   T P+ SY+VN+  QFMH P   H Q +K ILRY
Sbjct: 1231 LSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRY 1290

Query: 67   LKGVLSHGLRLKHSNNLSLVGFVDSI--------------------------------IF 126
            L G  +HG+ LK  N LSL  + D+                                 + 
Sbjct: 1291 LAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVV 1350

Query: 127  RSSIAVEYRCLALLAIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPILHSKIKH 186
            RSS   EYR +A  + E+ WICSLL +L I + R P ++CDN+ A +L  NP+ HS++KH
Sbjct: 1351 RSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKH 1410

Query: 187  VELDMYFVRDLIQKKKIIVRYLSASEQITNVRTKPTYATNFQKLNNKLTI 205
            + +D +F+R+ +Q   + V ++S  +Q+ +  TKP   T FQ   +K+ +
Sbjct: 1411 IAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGV 1460

[Close]

BLAST of Cmc11g0292021 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.1e-15
Identity = 49/132 (37.12%), Postives = 64/132 (48.48%), Query Frame = 0


Query: 15  FHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGVLSHG 74
           + D   +R  VGALQY TLT P+ SY+VN  CQ MH P L  + L+K +LRY+KG + HG
Sbjct: 94  YPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHG 153

Query: 75  LRLKHSNNLSLVGFVDS--------------------------------IIFRSSIAVEY 115
           L +  ++ L++  F DS                                 + RSS   EY
Sbjct: 154 LYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEY 213

[Close]

BLAST of Cmc11g0292021 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 77.0 bits (188), Expect = 2.8e-13
Identity = 56/222 (25.23%), Postives = 97/222 (43.69%), Query Frame = 0


Query: 22   RGAVGALQYATL-THPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGVLSHGLRLKHS 81
            R  +G L Y  L T P+ + +VN   ++        WQ +K +LRYLKG +   ++L   
Sbjct: 1182 RSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTID--MKLIFK 1241

Query: 82   NNLS----LVGFVDS---------------------------------IIFRSSIAVEYR 141
             NL+    ++G+VDS                                  +  SS   EY 
Sbjct: 1242 KNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYM 1301

Query: 142  CLALLAIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPILHSKIKHVELDMYFVR 201
             L     E +W+  LL  + I +     ++ DN   + ++ NP  H + KH+++  +F R
Sbjct: 1302 ALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAR 1361

Query: 202  DLIQKKKIIVRYLSASEQITNVRTKPTYATNFQKLNNKLTIV 206
            + +Q   I + Y+    Q+ ++ TKP  A  F +L +KL ++
Sbjct: 1362 EQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGLL 1401

[Close]

BLAST of Cmc11g0292021 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.1e-12
Identity = 51/208 (24.52%), Postives = 99/208 (47.60%), Query Frame = 0


Query: 21   YRGAVGALQYATL-THPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGVLSHGL---- 80
            Y  AVG+L YA + T P+ +++V    +F+ +P   HW+ VK ILRYL+G     L    
Sbjct: 1111 YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG 1170

Query: 81   ---RLKHSNNLSLVGFVDS------------------------IIFRSSIAVEYRCLALL 140
                LK   +  + G +D+                         +  S+   EY      
Sbjct: 1171 SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATET 1230

Query: 141  AIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPILHSKIKHVELDMYFVRDLIQK 197
              E++W+   L +L ++  +   ++CD+ SA+ LS+N + H++ KH+++  +++R+++  
Sbjct: 1231 GKEMIWLKRFLQELGLH-QKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDD 1290

[Close]

BLAST of Cmc11g0292021 vs. ExPASy TrEMBL
Match: A0A5A7UFS3 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold504G00520 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.3e-69
Identity = 149/244 (61.07%), Postives = 169/244 (69.26%), Query Frame = 0


Query: 1   MVSGLLLSAHQGKSFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLV 60
           MVSG LLSA QG+ FHD  + R  VGALQYATLTHPE SYSVNKACQFMH+PK THWQLV
Sbjct: 254 MVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLV 313

Query: 61  KHILRYLKGVLSHGLRLKHSNNLSLVGFVD------------------------------ 120
           K ILRYLKGVL HGL L  S+N SLVGF D                              
Sbjct: 314 KRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSK 373

Query: 121 --SIIFRSSIAVEYRCLALLAIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPIL 180
             SII RSS   EYRCLALLA E+VWI SLL DL I++P  P L CDNLSAVH S NPIL
Sbjct: 374 KQSIISRSSTEAEYRCLALLATEMVWIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPIL 433

Query: 181 HSKIKHVELDMYFVRDLIQKKKIIVRYLSASEQITNVRTKPTYATNFQKLNNKLTIVDST 213
           HSK KHVELD+YFVRDLI+K+K+ VR+L A+EQI ++ TKP  A +F KL N +T++DS 
Sbjct: 434 HSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNITVIDSA 493

[Close]

BLAST of Cmc11g0292021 vs. ExPASy TrEMBL
Match: A0A5A7V553 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G00210 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.9e-69
Identity = 151/244 (61.89%), Postives = 168/244 (68.85%), Query Frame = 0


Query: 1   MVSGLLLSAHQGKSFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLV 60
           MVSG LLSA QG+ FHD  +YR  VGALQYATLTHPE SYSVNKACQF+H+PK THWQLV
Sbjct: 11  MVSGPLLSAFQGELFHDVHLYRSIVGALQYATLTHPEISYSVNKACQFIHTPKHTHWQLV 70

Query: 61  KHILRYLKGVLSHGLRLKHSNNLSLVGFVD------------------------------ 120
           K ILRYLKGVL H L L  S+N+SL GFVD                              
Sbjct: 71  KKILRYLKGVLYHALWLSKSDNMSLDGFVDADWASDPDDRKSTSGFCVYFGNNLVSWGSK 130

Query: 121 --SIIFRSSIAVEYRCLALLAIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPIL 180
             SII RSS   EYRCL LLA ELVWI SLL DL I++P  P LWCDNLSAVHLS N IL
Sbjct: 131 KQSIIDRSSTKAEYRCLTLLATELVWIRSLLNDLYIDLPFPPILWCDNLSAVHLSANSIL 190

Query: 181 HSKIKHVELDMYFVRDLIQKKKIIVRYLSASEQITNVRTKPTYATNFQKLNNKLTIVDST 213
           HS  KHVELD+YFVRDLIQK K+ +R+LSA+EQI ++ TKP  A +  KL NKLT+VDS 
Sbjct: 191 HSTTKHVELDIYFVRDLIQKGKLFIRHLSATEQIADILTKPLSAQSSHKLKNKLTVVDSA 250

[Close]

BLAST of Cmc11g0292021 vs. ExPASy TrEMBL
Match: A0A1S4E598 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107992166 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.9e-69
Identity = 151/244 (61.89%), Postives = 168/244 (68.85%), Query Frame = 0


Query: 1   MVSGLLLSAHQGKSFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLV 60
           MVSG LLSA QG+ FHD  +YR  VGALQYATLTHPE SYSVNKACQF+H+PK THWQLV
Sbjct: 70  MVSGPLLSAFQGELFHDVHLYRSIVGALQYATLTHPEISYSVNKACQFIHTPKHTHWQLV 129

Query: 61  KHILRYLKGVLSHGLRLKHSNNLSLVGFVD------------------------------ 120
           K ILRYLKGVL H L L  S+N+SL GFVD                              
Sbjct: 130 KKILRYLKGVLYHALWLSKSDNMSLDGFVDADWASDPDDRKSTSGFCVYFGNNLVSWGSK 189

Query: 121 --SIIFRSSIAVEYRCLALLAIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPIL 180
             SII RSS   EYRCL LLA ELVWI SLL DL I++P  P LWCDNLSAVHLS N IL
Sbjct: 190 KQSIIDRSSTKAEYRCLTLLATELVWIRSLLNDLYIDLPFPPILWCDNLSAVHLSANSIL 249

Query: 181 HSKIKHVELDMYFVRDLIQKKKIIVRYLSASEQITNVRTKPTYATNFQKLNNKLTIVDST 213
           HS  KHVELD+YFVRDLIQK K+ +R+LSA+EQI ++ TKP  A +  KL NKLT+VDS 
Sbjct: 250 HSTTKHVELDIYFVRDLIQKGKLFIRHLSATEQIADILTKPLSAQSSHKLKNKLTVVDSA 309

[Close]

BLAST of Cmc11g0292021 vs. ExPASy TrEMBL
Match: A0A5D3CFS1 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00030 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.1e-68
Identity = 146/233 (62.66%), Postives = 163/233 (69.96%), Query Frame = 0


Query: 12  GKSFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGVL 71
           G+ FHD  +YR  VGALQYATLTHPE SYSVNKACQFMH+PK THWQLVK ILRYLKGVL
Sbjct: 98  GEPFHDVHLYRSIVGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLVKRILRYLKGVL 157

Query: 72  SHGLRLKHSNNLSLVGFVD--------------------------------SIIFRSSIA 131
            HGL  + S+N+SLVGF D                                SII RSS  
Sbjct: 158 YHGLWFRKSDNMSLVGFADADWASDPDDRKSTSGFYVYFGNNLVSWGSKKHSIISRSSTE 217

Query: 132 VEYRCLALLAIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPILHSKIKHVELDM 191
            EYRCLALLA ELVWI SLL DL I++P  P LWCDNLSAVHLS NPILHSK KHVELD+
Sbjct: 218 AEYRCLALLATELVWIRSLLNDLYIDLPFPPILWCDNLSAVHLSANPILHSKTKHVELDI 277

Query: 192 YFVRDLIQKKKIIVRYLSASEQITNVRTKPTYATNFQKLNNKLTIVDSTIIGL 213
           YFVRDLIQK K+ VR+L A+EQI ++ TKP  A +F  L NKLT++DST IGL
Sbjct: 278 YFVRDLIQKGKLAVRHLPATEQIADILTKPLSAQSFHTLKNKLTVIDSTAIGL 330

[Close]

BLAST of Cmc11g0292021 vs. ExPASy TrEMBL
Match: A0A5A7UVQ3 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001700 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 5.6e-65
Identity = 142/233 (60.94%), Postives = 159/233 (68.24%), Query Frame = 0


Query: 12  GKSFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGVL 71
           G+ FHD  +YR  VGALQYATLTHPE SYSVNKACQF+H+PK THWQLVK ILRYLKGVL
Sbjct: 190 GELFHDVHLYRSVVGALQYATLTHPEISYSVNKACQFIHTPKHTHWQLVKRILRYLKGVL 249

Query: 72  SHGLRLKHSNNLSLVGFVD--------------------------------SIIFRSSIA 131
            H L L  S+N+SL GFVD                                SII RSS  
Sbjct: 250 YHALWLSKSDNMSLDGFVDADWASDSDDRKSTSGFCVYFGNNLVSWGSKKQSIIDRSSTK 309

Query: 132 VEYRCLALLAIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPILHSKIKHVELDM 191
            EYRCL LLA ELVWI SLL DL I++P  P LWCDNLSAVHLS N ILHS  KHVELD+
Sbjct: 310 AEYRCLTLLATELVWIRSLLNDLYIDLPFPPILWCDNLSAVHLSANSILHSTTKHVELDI 369

Query: 192 YFVRDLIQKKKIIVRYLSASEQITNVRTKPTYATNFQKLNNKLTIVDSTIIGL 213
           YFVRDLIQK K+ VR+LSA+EQI ++ TKP  A +  KL NKLT++DS  IGL
Sbjct: 370 YFVRDLIQKGKLFVRHLSATEQIADILTKPLSAQSSHKLKNKLTVIDSASIGL 422

[Close]

BLAST of Cmc11g0292021 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 101.7 bits (252), Expect = 7.6e-22
Identity = 57/196 (29.08%), Postives = 90/196 (45.92%), Query Frame = 0


Query: 1   MVSGLLLSAHQGKSFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLV 60
           M   +  SAH G  F D   YR  +G L Y  +T  + S++VNK  QF  +P+L H Q V
Sbjct: 358 MDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAV 417

Query: 61  KHILRYLKGVLSHGLRLKHSNNLSLVGFVDS----------------------------- 120
             IL Y+KG +  GL       + L  F D+                             
Sbjct: 418 MKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSK 477

Query: 121 ---IIFRSSIAVEYRCLALLAIELVWICSLLFDLCINIPRSPFLWCDNLSAVHLSENPIL 165
              ++ +SS   EYR L+    E++W+     +L + + +   L+CDN +A+H++ N + 
Sbjct: 478 KQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVF 537

[Close]

BLAST of Cmc11g0292021 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 3.6e-16
Identity = 49/132 (37.12%), Postives = 64/132 (48.48%), Query Frame = 0


Query: 15  FHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGVLSHG 74
           + D   +R  VGALQY TLT P+ SY+VN  CQ MH P L  + L+K +LRY+KG + HG
Sbjct: 94  YPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHG 153

Query: 75  LRLKHSNNLSLVGFVDS--------------------------------IIFRSSIAVEY 115
           L +  ++ L++  F DS                                 + RSS   EY
Sbjct: 154 LYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEY 213

[Close]

BLAST of Cmc11g0292021 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.2e-05
Identity = 21/62 (33.87%), Postives = 35/62 (56.45%), Query Frame = 0


Query: 30 YATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGVLSHGLRLKHSNNLSLVGFV 89
          Y T+T P+ +++VN+  QF  + +    Q V  +L Y+KG +  GL    +++L L  F 
Sbjct: 2  YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 90 DS 92
          DS
Sbjct: 62 DS 63

The following BLAST results are available for this feature:

BLAST of Cmc11g0292021 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052371.1	2.7e-69	61.07	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK09417.1 putative m...	[more]
KAA0063213.1	1.0e-68	61.89	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
XP_016903397.1	1.0e-68	61.89	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]	[more]
KAA0048296.1	2.3e-68	62.66	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK10641.1 putative m...	[more]
KAA0059238.1	1.2e-64	60.94	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0292021 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	2.4e-36	35.02	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.2e-35	36.52	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P92519	5.1e-15	37.12	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P04146	2.8e-13	25.23	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	4.1e-12	24.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Cmc11g0292021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UFS3	1.3e-69	61.07	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7V553	4.9e-69	61.89	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S4E598	4.9e-69	61.89	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3CFS1	1.1e-68	62.66	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7UVQ3	5.6e-65	60.94	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of Cmc11g0292021 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	7.6e-22	29.08	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	3.6e-16	37.12	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	2.2e-05	33.87	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 80..205
None	No IPR available	PANTHER	PTHR11439:SF343	SUBFAMILY NOT NAMED	coord: 80..205
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 91..189 e-value: 9.7552E-29 score: 102.932

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0292021.1	Cmc11g0292021.1	mRNA