Cmc11g0291611 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0291611
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 7023032 .. 7024354 (-)
RNA-Seq Expression	Cmc11g0291611
Synteny	Cmc11g0291611

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCAGCTGAGCTAAAGGAGTTAAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCAATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTTGTTGTGATGTCCTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGAATTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTGATTTACTCGAAAACCGAGGCTGAGCACGAGGAGCACTTGCACCAGGTGTTGGAGACTCTTCGAGCCAACCAGCTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAAGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAAGGAGTTTCAGTGGATCCCGCAAAGATTGAAGCGGCGACCAATTGGCCTCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAACCCCTTTTGTCTGGAGCCCAGCTTGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATCTATAGTGACGCCTCCAAGAAGGGACTAGGTTGTGTCCTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTGCCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCGAATGTAGTGGCTGATGCGCTAAGTAGGAAAGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGACTTTGAGAGGGCAGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGCTCAGTTGA

mRNA sequence

ATGGCTCCAGCTGAGCTAAAGGAGTTAAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCAATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTTGTTGTGATGTCCTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGAATTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTGATTTACTCGAAAACCGAGGCTGAGCACGAGGAGCACTTGCACCAGGTGTTGGAGACTCTTCGAGCCAACCAGCTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAAGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAAGGAGTTTCAGTGGATCCCGCAAAGATTGAAGCGGCGACCAATTGGCCTCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAACCCCTTTTGTCTGGAGCCCAGCTTGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATCTATAGTGACGCCTCCAAGAAGGGACTAGGTTGTGTCCTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTGCCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCGAATGTAGTGGCTGATGCGCTAAGTAGGAAAGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGACTTTGAGAGGGCAGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGCTCAGTTGA

Coding sequence (CDS)

ATGGCTCCAGCTGAGCTAAAGGAGTTAAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCAATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTTGTTGTGATGTCCTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGAATTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTGATTTACTCGAAAACCGAGGCTGAGCACGAGGAGCACTTGCACCAGGTGTTGGAGACTCTTCGAGCCAACCAGCTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAAGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAAGGAGTTTCAGTGGATCCCGCAAAGATTGAAGCGGCGACCAATTGGCCTCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAACCCCTTTTGTCTGGAGCCCAGCTTGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATCTATAGTGACGCCTCCAAGAAGGGACTAGGTTGTGTCCTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTGCCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCGAATGTAGTGGCTGATGCGCTAAGTAGGAAAGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGACTTTGAGAGGGCAGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGCTCAGTTGA

Protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLLS

Homology

[Close]

BLAST of Cmc11g0291611 vs. NCBI nr
Match: KAA0063793.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 875.2 bits (2260), Expect = 2.4e-250
Identity = 432/438 (98.63%), Postives = 436/438 (99.54%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 137 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 196

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT
Sbjct: 197 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 256

Query: 121 NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFS 180
           NAPAVFMDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFS
Sbjct: 257 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 316

Query: 181 KCEFWLKKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEFWL+KVTFLGHVVSSEGVSVDPAKIEA TNWPRPSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 317 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 376

Query: 241 SRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
           SRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL
Sbjct: 377 SRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 436

Query: 301 GCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 360
           GCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL
Sbjct: 437 GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 496

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 420
           KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR
Sbjct: 497 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 556

Query: 421 DFERAEIAVSVGEVTAQL 439
           DFERAEIAVSVGEVTAQL
Sbjct: 557 DFERAEIAVSVGEVTAQL 574

[Close]

BLAST of Cmc11g0291611 vs. NCBI nr
Match: KAA0031437.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 873.2 bits (2255), Expect = 9.2e-250
Identity = 432/438 (98.63%), Postives = 435/438 (99.32%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 554 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 613

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT
Sbjct: 614 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 673

Query: 121 NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFS 180
           NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFS
Sbjct: 674 NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 733

Query: 181 KCEFWLKKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEFWL+KVTFLGHVVSSEGVSVDPAKIEA TNW RPSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 734 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDF 793

Query: 241 SRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
           SRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL
Sbjct: 794 SRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 853

Query: 301 GCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 360
           GCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL
Sbjct: 854 GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 913

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 420
           KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR
Sbjct: 914 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 973

Query: 421 DFERAEIAVSVGEVTAQL 439
           DFERAEIAVSVGEVTAQL
Sbjct: 974 DFERAEIAVSVGEVTAQL 991

[Close]

BLAST of Cmc11g0291611 vs. NCBI nr
Match: KAA0033825.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 873.2 bits (2255), Expect = 9.2e-250
Identity = 432/438 (98.63%), Postives = 435/438 (99.32%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 1218 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 1277

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT
Sbjct: 1278 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 1337

Query: 121  NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFS 180
            NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFS
Sbjct: 1338 NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 1397

Query: 181  KCEFWLKKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDF 240
            KCEFWL+KVTFLGHVVSSEGVSVDPAKIEA TNW RPSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 1398 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDF 1457

Query: 241  SRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            SRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL
Sbjct: 1458 SRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 1517

Query: 301  GCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 360
            GCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL
Sbjct: 1518 GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 1577

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR
Sbjct: 1578 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 1637

Query: 421  DFERAEIAVSVGEVTAQL 439
            DFERAEIAVSVGEVTAQL
Sbjct: 1638 DFERAEIAVSVGEVTAQL 1655

[Close]

BLAST of Cmc11g0291611 vs. NCBI nr
Match: KAA0025848.1 (pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo var. makuwa] >KAA0036593.1 pol protein [Cucumis melo var. makuwa] >KAA0036739.1 pol protein [Cucumis melo var. makuwa] >KAA0037408.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 873.2 bits (2255), Expect = 9.2e-250
Identity = 432/438 (98.63%), Postives = 435/438 (99.32%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 613  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 672

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT
Sbjct: 673  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 732

Query: 121  NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFS 180
            NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFS
Sbjct: 733  NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 792

Query: 181  KCEFWLKKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDF 240
            KCEFWL+KVTFLGHVVSSEGVSVDPAKIEA TNW RPSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 793  KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDF 852

Query: 241  SRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            SRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL
Sbjct: 853  SRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 912

Query: 301  GCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 360
            GCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL
Sbjct: 913  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 972

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR
Sbjct: 973  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 1032

Query: 421  DFERAEIAVSVGEVTAQL 439
            DFERAEIAVSVGEVTAQL
Sbjct: 1033 DFERAEIAVSVGEVTAQL 1050

[Close]

BLAST of Cmc11g0291611 vs. NCBI nr
Match: TYK28422.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 873.2 bits (2255), Expect = 9.2e-250
Identity = 432/438 (98.63%), Postives = 435/438 (99.32%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 964  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 1023

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT
Sbjct: 1024 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 1083

Query: 121  NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFS 180
            NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFS
Sbjct: 1084 NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 1143

Query: 181  KCEFWLKKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDF 240
            KCEFWL+KVTFLGHVVSSEGVSVDPAKIEA TNW RPSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 1144 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDF 1203

Query: 241  SRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            SRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL
Sbjct: 1204 SRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 1263

Query: 301  GCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 360
            GCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL
Sbjct: 1264 GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 1323

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR
Sbjct: 1324 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 1383

Query: 421  DFERAEIAVSVGEVTAQL 439
            DFERAEIAVSVGEVTAQL
Sbjct: 1384 DFERAEIAVSVGEVTAQL 1401

[Close]

BLAST of Cmc11g0291611 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 6.5e-89
Identity = 164/403 (40.69%), Postives = 253/403 (62.78%), Query Frame = 0


Query: 7   KELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRY 66
           +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN++TV +R+
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTN 126
           P+P +D++  +L     F+ IDL  G+HQ+ +    + KTAF +++GHYE++ M FGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 APAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFSK 186
           APA F   MN + +  L+   +V++DDI+++S +  EH + L  V E L    L  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 187 CEFWLKKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDFS 246
           CEF  ++ TFLGHV++ +G+  +P KIEA   +P P+   EI++FLGL GYYR+F+ +F+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 247 RIASPLTQLTKKGTPF-VWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 306
            IA P+T+  KK       +P  + +F++LK  +   P+L VPD +  F + +DAS   L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

Query: 307 GCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 366
           G VL Q G  ++Y SR L  HE NY   + EL A+V+A K +RHYL G   +I +DH+ L
Sbjct: 521 GAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPL 580

Query: 367 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 404
            + +  K+ N +  RW   + ++D +I Y  GK N VADALSR
Sbjct: 581 SWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]

BLAST of Cmc11g0291611 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 5.2e-86
Identity = 161/402 (40.05%), Postives = 243/402 (60.45%), Query Frame = 0


Query: 8   ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYP 67
           E++ Q+QE+L++G IR S SP+ +P   V KK         R+ IDYR+LN++T+ +RYP
Sbjct: 221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYP 280

Query: 68  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNA 127
           +P +D++  +L     F+ IDL  G+HQ+ + +  I KTAF ++ GHYE++ M FGL NA
Sbjct: 281 IPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 128 PAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFSKC 187
           PA F   MN + +  L+   +V++DDI+I+S +  EH   +  V   L    L  +  KC
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKC 400

Query: 188 EFWLKKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR 247
           EF  K+  FLGH+V+ +G+  +P K++A  ++P P+   EIR+FLGL GYYR+F+ +++ 
Sbjct: 401 EFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYAD 460

Query: 248 IASPLTQLTKKGTPF-VWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLG 307
           IA P+T   KK T           +F++LK  ++  P+L +PD    FV+ +DAS   LG
Sbjct: 461 IAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALG 520

Query: 308 CVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLK 367
            VL Q G  +++ SR L  HE NY A + EL A+V+A K +RHYL G +  I +DH+ L+
Sbjct: 521 AVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLR 580

Query: 368 YFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 404
           +    KE   +  RW   + +Y  +I Y  GK N VADALSR
Sbjct: 581 WLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]

BLAST of Cmc11g0291611 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 9.1e-83
Identity = 154/417 (36.93%), Postives = 249/417 (59.71%), Query Frame = 0


Query: 8   ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNKVTVKNRYP 67
           E++ Q+ ELL  G IRPS SP+ +P+  V KK     +   R+ +D++ LN VT+ + YP
Sbjct: 138 EVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYP 197

Query: 68  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNA 127
           +P I+     L  A  F+ +DL SG+HQ+ +++ DIPKTAF +  G YEF+ + FGL NA
Sbjct: 198 IPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNA 257

Query: 128 PAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFSKC 187
           PA+F  +++ + +E +     V+IDDI+++S+    H ++L  VL +L    L     K 
Sbjct: 258 PAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKS 317

Query: 188 EFWLKKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR 247
            F   +V FLG++V+++G+  DP K+ A +  P P++V E++ FLG+  YYR+F++D+++
Sbjct: 318 HFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAK 377

Query: 248 IASPLTQLTK-----------KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVI 307
           +A PLT LT+              P        +SF +LK  L ++ +L  P  +  F +
Sbjct: 378 VAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHL 437

Query: 308 YSDASKKGLGCVLMQ----QGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLY 367
            +DAS   +G VL Q    + + +AY SR L   E+NY   + E+ A++++L   R YLY
Sbjct: 438 TTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLY 497

Query: 368 GE-KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 404
           G   I++YTDH+ L +    +  N + +RW   +++Y+CE++Y PGK+NVVADALSR
Sbjct: 498 GAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADALSR 554

[Close]

BLAST of Cmc11g0291611 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 300.8 bits (769), Expect = 2.5e-80
Identity = 162/405 (40.00%), Postives = 241/405 (59.51%), Query Frame = 0


Query: 7    KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI 66
            +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRI
Sbjct: 610  QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 669

Query: 67   DDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVF 126
            D+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF +  G YE+ VM FGL NAP+ F
Sbjct: 670  DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 729

Query: 127  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFSKCEFWL 186
               M   F++    FV V++DDILI+S++  EH +HL  VLE L+   L  K  KC+F  
Sbjct: 730  ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 789

Query: 187  KKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 246
            ++  FLG+ +  + ++    K  A  ++P P TV + + FLG+  YYRRF+ + S+IA P
Sbjct: 790  EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 849

Query: 247  LTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 306
            +       +   W+   +++  +LK  L  +PVL   +   N+ + +DASK G+G VL +
Sbjct: 850  IQLFICDKSQ--WTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEE 909

Query: 307  QGK------VVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 366
                     VV Y S+ L+  ++NYPA +LEL  ++ AL  +R+ L+G+   + TDH SL
Sbjct: 910  VDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISL 969

Query: 367  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 406
                 + E   R +RWL+ +  YD  + Y  G  NVVADA+SR V
Sbjct: 970  LSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAV 1010

[Close]

BLAST of Cmc11g0291611 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 300.8 bits (769), Expect = 2.5e-80
Identity = 161/405 (39.75%), Postives = 242/405 (59.75%), Query Frame = 0


Query: 7    KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI 66
            +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRI
Sbjct: 636  QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 695

Query: 67   DDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVF 126
            D+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF +  G YE+ VM FGL NAP+ F
Sbjct: 696  DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 755

Query: 127  MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFSKCEFWL 186
               M   F++    FV V++DDILI+S++  EH +HL  VLE L+   L  K  KC+F  
Sbjct: 756  ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 815

Query: 187  KKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 246
            ++  FLG+ +  + ++    K  A  ++P P TV + + FLG+  YYRRF+ + S+IA P
Sbjct: 816  EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 875

Query: 247  LTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 306
            +       +   W+   +++ ++LK  L  +PVL   +   N+ + +DASK G+G VL +
Sbjct: 876  IQLFICDKSQ--WTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEE 935

Query: 307  QGK------VVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 366
                     VV Y S+ L+  ++NYPA +LEL  ++ AL  +R+ L+G+   + TDH SL
Sbjct: 936  VDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISL 995

Query: 367  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 406
                 + E   R +RWL+ +  YD  + Y  G  NVVADA+SR +
Sbjct: 996  LSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAI 1036

[Close]

BLAST of Cmc11g0291611 vs. ExPASy TrEMBL
Match: A0A5A7V6R2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00070 PE=4 SV=1)

HSP 1 Score: 875.2 bits (2260), Expect = 1.2e-250
Identity = 432/438 (98.63%), Postives = 436/438 (99.54%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 137 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 196

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT
Sbjct: 197 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 256

Query: 121 NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFS 180
           NAPAVFMDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFS
Sbjct: 257 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 316

Query: 181 KCEFWLKKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDF 240
           KCEFWL+KVTFLGHVVSSEGVSVDPAKIEA TNWPRPSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 317 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 376

Query: 241 SRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
           SRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL
Sbjct: 377 SRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 436

Query: 301 GCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 360
           GCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL
Sbjct: 437 GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 496

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 420
           KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR
Sbjct: 497 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 556

Query: 421 DFERAEIAVSVGEVTAQL 439
           DFERAEIAVSVGEVTAQL
Sbjct: 557 DFERAEIAVSVGEVTAQL 574

[Close]

BLAST of Cmc11g0291611 vs. ExPASy TrEMBL
Match: A0A5D3CQB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001420 PE=4 SV=1)

HSP 1 Score: 873.2 bits (2255), Expect = 4.5e-250
Identity = 432/438 (98.63%), Postives = 435/438 (99.32%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 613  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 672

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT
Sbjct: 673  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 732

Query: 121  NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFS 180
            NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFS
Sbjct: 733  NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 792

Query: 181  KCEFWLKKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDF 240
            KCEFWL+KVTFLGHVVSSEGVSVDPAKIEA TNW RPSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 793  KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDF 852

Query: 241  SRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            SRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL
Sbjct: 853  SRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 912

Query: 301  GCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 360
            GCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL
Sbjct: 913  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 972

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR
Sbjct: 973  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 1032

Query: 421  DFERAEIAVSVGEVTAQL 439
            DFERAEIAVSVGEVTAQL
Sbjct: 1033 DFERAEIAVSVGEVTAQL 1050

[Close]

BLAST of Cmc11g0291611 vs. ExPASy TrEMBL
Match: A0A5A7UBS1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00110 PE=4 SV=1)

HSP 1 Score: 873.2 bits (2255), Expect = 4.5e-250
Identity = 432/438 (98.63%), Postives = 435/438 (99.32%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 613  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 672

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT
Sbjct: 673  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 732

Query: 121  NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFS 180
            NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFS
Sbjct: 733  NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 792

Query: 181  KCEFWLKKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDF 240
            KCEFWL+KVTFLGHVVSSEGVSVDPAKIEA TNW RPSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 793  KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDF 852

Query: 241  SRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            SRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL
Sbjct: 853  SRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 912

Query: 301  GCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 360
            GCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL
Sbjct: 913  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 972

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR
Sbjct: 973  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 1032

Query: 421  DFERAEIAVSVGEVTAQL 439
            DFERAEIAVSVGEVTAQL
Sbjct: 1033 DFERAEIAVSVGEVTAQL 1050

[Close]

BLAST of Cmc11g0291611 vs. ExPASy TrEMBL
Match: A0A5A7TEQ2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00410 PE=4 SV=1)

HSP 1 Score: 873.2 bits (2255), Expect = 4.5e-250
Identity = 432/438 (98.63%), Postives = 435/438 (99.32%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 613  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 672

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT
Sbjct: 673  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 732

Query: 121  NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFS 180
            NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFS
Sbjct: 733  NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 792

Query: 181  KCEFWLKKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDF 240
            KCEFWL+KVTFLGHVVSSEGVSVDPAKIEA TNW RPSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 793  KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDF 852

Query: 241  SRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            SRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL
Sbjct: 853  SRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 912

Query: 301  GCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 360
            GCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL
Sbjct: 913  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 972

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR
Sbjct: 973  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 1032

Query: 421  DFERAEIAVSVGEVTAQL 439
            DFERAEIAVSVGEVTAQL
Sbjct: 1033 DFERAEIAVSVGEVTAQL 1050

[Close]

BLAST of Cmc11g0291611 vs. ExPASy TrEMBL
Match: A0A5A7TSL0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001340 PE=4 SV=1)

HSP 1 Score: 873.2 bits (2255), Expect = 4.5e-250
Identity = 432/438 (98.63%), Postives = 435/438 (99.32%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 613  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 672

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT
Sbjct: 673  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 732

Query: 121  NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANQLYAKFS 180
            NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN+LYAKFS
Sbjct: 733  NAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 792

Query: 181  KCEFWLKKVTFLGHVVSSEGVSVDPAKIEAATNWPRPSTVSEIRSFLGLAGYYRRFVEDF 240
            KCEFWL+KVTFLGHVVSSEGVSVDPAKIEA TNW RPSTVSEIRSFLGLAGYYRRFVEDF
Sbjct: 793  KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDF 852

Query: 241  SRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            SRIASPLTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL
Sbjct: 853  SRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 912

Query: 301  GCVLMQQGKVVAYASRQLKIHEQNYPAHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 360
            GCVLMQQGKVVAYASRQLKIHEQNYP HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL
Sbjct: 913  GCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSL 972

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR
Sbjct: 973  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLR 1032

Query: 421  DFERAEIAVSVGEVTAQL 439
            DFERAEIAVSVGEVTAQL
Sbjct: 1033 DFERAEIAVSVGEVTAQL 1050

[Close]

BLAST of Cmc11g0291611 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 1.5e-27
Identity = 57/125 (45.60%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 162 HLHQVLETLRANQLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPAKIEAATNWPRPST 221
           HL  VL+    +Q YA   KC F   ++ +LG  H++S EGVS DPAK+EA   WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 VSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPV 281
            +E+R FLGL GYYRRFV+++ +I  PLT+L KK +   W+     +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LTVPD 285
           L +PD
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:

BLAST of Cmc11g0291611 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063793.1	2.4e-250	98.63	pol protein [Cucumis melo var. makuwa]	[more]
KAA0031437.1	9.2e-250	98.63	pol protein [Cucumis melo var. makuwa]	[more]
KAA0033825.1	9.2e-250	98.63	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025848.1	9.2e-250	98.63	pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo v...	[more]
TYK28422.1	9.2e-250	98.63	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0291611 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	6.5e-89	40.69	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	5.2e-86	40.05	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	9.1e-83	36.93	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q99315	2.5e-80	40.00	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	2.5e-80	39.75	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc11g0291611 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V6R2	1.2e-250	98.63	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82...	[more]
A0A5D3CQB5	4.5e-250	98.63	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7UBS1	4.5e-250	98.63	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7TEQ2	4.5e-250	98.63	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19...	[more]
A0A5A7TSL0	4.5e-250	98.63	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]

BLAST of Cmc11g0291611 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.5e-27	45.60	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 3.8E-28 score: 98.5
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 10.65903
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..292 e-value: 1.9E-32 score: 113.1
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 4.9E-88 score: 296.0
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 287..383 e-value: 1.2E-33 score: 115.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 293..415 e-value: 1.3E-5 score: 27.0
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 4.9E-88 score: 296.0
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 2..392
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..392
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 290..405 e-value: 2.82664E-59 score: 187.7
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 2.43863E-100 score: 295.273
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..389

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0291611.1	Cmc11g0291611.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding