Cmc11g0290731 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0290731
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr11: 5946108 .. 5946497 (+)
RNA-Seq Expression	Cmc11g0290731
Synteny	Cmc11g0290731

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATGGAAGCAGGGTTTTTCTCTTTACAGAAGAATTAGACATGGTCATTGGTTCCAATGCCTCTTAATCCTCATTCGATCAAAGTGGATTTACAAAATCAAGCCAGGTACAAGAGGTGACAGTAAGCCTAAGTATAAGGCTAGGTTGGAAGCCAAGGGCTACACTCAGAAGGACGAAGTTGACTTTCATGAGATTTTCTCTCCGGTGGTGAGGCATTCGTCCATTAGATTAATATTATATATTGTTGTTCAGTTTGATATGTTTATTGAACAGATGAATGTCACCATAACATTCCTTCATGGAGAACTGGAGGAAGTGATTTACATGGCTCAACCTAAGGGCTATGGGGTGAAGGGAAAGGAAGACATGGTTTGTCGTCTTCACTAG

mRNA sequence

ATGCTATGGAAGCAGGGTTTTTCTCTTTACAGAAGAATTAGACATGGTCATTGGTTCCAATGCCTCTTAATCCTCATTCGATCAAAGTGGATTTACAAAATCAAGCCAGGTACAAGAGGTGACAGTAAGCCTAAGTATAAGGCTAGGTTGGAAGCCAAGGGCTACACTCAGAAGGACGAAGTTGACTTTCATGAGATTTTCTCTCCGGTGGTGAGGCATTCGTCCATTAGATTAATATTATATATTGTTGTTCAGTTTGATATGTTTATTGAACAGATGAATGTCACCATAACATTCCTTCATGGAGAACTGGAGGAAGTGATTTACATGGCTCAACCTAAGGGCTATGGGGTGAAGGGAAAGGAAGACATGGTTTGTCGTCTTCACTAG

Coding sequence (CDS)

ATGCTATGGAAGCAGGGTTTTTCTCTTTACAGAAGAATTAGACATGGTCATTGGTTCCAATGCCTCTTAATCCTCATTCGATCAAAGTGGATTTACAAAATCAAGCCAGGTACAAGAGGTGACAGTAAGCCTAAGTATAAGGCTAGGTTGGAAGCCAAGGGCTACACTCAGAAGGACGAAGTTGACTTTCATGAGATTTTCTCTCCGGTGGTGAGGCATTCGTCCATTAGATTAATATTATATATTGTTGTTCAGTTTGATATGTTTATTGAACAGATGAATGTCACCATAACATTCCTTCATGGAGAACTGGAGGAAGTGATTTACATGGCTCAACCTAAGGGCTATGGGGTGAAGGGAAAGGAAGACATGGTTTGTCGTCTTCACTAG

Protein sequence

MLWKQGFSLYRRIRHGHWFQCLLILIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVVQFDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVKGKEDMVCRLH

Homology

[Close]

BLAST of Cmc11g0290731 vs. NCBI nr
Match: TYK13826.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 185.7 bits (470), Expect = 2.6e-43
Identity = 91/105 (86.67%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 25  LIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 84
           LI+SKWIYKIKPGT G+SKP+YKARL AKGYTQK+ VDFHEIFSPVVRHSSIRLIL I V
Sbjct: 696 LIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAV 755

Query: 85  QFDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVKGKEDMVCRLH 130
            FDMFIEQM+VT  FLHGELEEVIYMAQPKGY VKGKEDMVCRLH
Sbjct: 756 HFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLH 800

[Close]

BLAST of Cmc11g0290731 vs. NCBI nr
Match: TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 185.7 bits (470), Expect = 2.6e-43
Identity = 91/105 (86.67%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 25  LIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 84
           LI+SKWIYKIKPGT G+SKP+YKARL AKGYTQK+ VDFHEIFSPVVRHSSIRLIL I V
Sbjct: 866 LIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAV 925

Query: 85  QFDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVKGKEDMVCRLH 130
            FDMFIEQM+VT  FLHGELEEVIYMAQPKGY VKGKEDMVCRLH
Sbjct: 926 HFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLH 970

[Close]

BLAST of Cmc11g0290731 vs. NCBI nr
Match: KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 185.7 bits (470), Expect = 2.6e-43
Identity = 91/105 (86.67%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 25  LIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 84
           LI+SKWIYKIKPGT G+SKP+YKARL AKGYTQK+ VDFHEIFSPVVRHSSIRLIL I V
Sbjct: 866 LIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAV 925

Query: 85  QFDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVKGKEDMVCRLH 130
            FDMFIEQM+VT  FLHGELEEVIYMAQPKGY VKGKEDMVCRLH
Sbjct: 926 HFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLH 970

[Close]

BLAST of Cmc11g0290731 vs. NCBI nr
Match: KAA0067243.1 (retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] >TYK10853.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 184.9 bits (468), Expect = 4.4e-43
Identity = 92/105 (87.62%), Postives = 97/105 (92.38%), Query Frame = 0


Query: 25  LIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 84
           LI+SKWIYKIKPGT G+SKP+YKARL AKGYTQK+ VDFHEIFSPVVRHSSIRLIL IVV
Sbjct: 706 LIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIVV 765

Query: 85  QFDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVKGKEDMVCRLH 130
            FDMFIEQM+VT TFLHGELEEVIYMAQPKGY VKGKEDMV RLH
Sbjct: 766 HFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVFRLH 810

[Close]

BLAST of Cmc11g0290731 vs. NCBI nr
Match: KAA0066633.1 (hypothetical protein E6C27_scaffold979G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 176.4 bits (446), Expect = 1.6e-40
Identity = 87/105 (82.86%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 25  LIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 84
           LI+ KWIYKIKPGT GDSKP+YKARL AKGYTQK+ VDFHEIFSPVVRHSSIRLIL I +
Sbjct: 288 LIQLKWIYKIKPGTGGDSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILTIDI 347

Query: 85  QFDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVKGKEDMVCRLH 130
            F+MFIEQM+VT TFLHGELEEVIYMAQPKGY VKGKE  VCRL+
Sbjct: 348 HFNMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEHRVCRLY 392

[Close]

BLAST of Cmc11g0290731 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.3e-23
Identity = 54/105 (51.43%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 26  IRSKWIYKIKPGTRGDSK-PKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 85
           ++ KW++K+K    GD K  +YKARL  KG+ QK  +DF EIFSPVV+ +SIR IL +  
Sbjct: 855 LKCKWVFKLKKD--GDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAA 914

Query: 86  QFDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVKGKEDMVCRLH 130
             D+ +EQ++V   FLHG+LEE IYM QP+G+ V GK+ MVC+L+
Sbjct: 915 SLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLN 957

[Close]

BLAST of Cmc11g0290731 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 89.0 bits (219), Expect = 4.3e-17
Identity = 44/105 (41.90%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 25   LIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 84
            ++ S+W++ +K    G +  +YKARL A+G+TQK ++D+ E F+PV R SS R IL +V+
Sbjct: 934  IVDSRWVFSVKYNELG-NPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVI 993

Query: 85   QFDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVKGKEDMVCRLH 130
            Q+++ + QM+V   FL+G L+E IYM  P+  G+    D VC+L+
Sbjct: 994  QYNLKVHQMDVKTAFLNGTLKEEIYMRLPQ--GISCNSDNVCKLN 1035

[Close]

BLAST of Cmc11g0290731 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.2e-16
Identity = 44/104 (42.31%), Postives = 66/104 (63.46%), Query Frame = 0


Query: 25   LIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 84
            ++  +WI+  K  + G S  +YKARL AKGY Q+  +D+ E FSPV++ +SIR++L + V
Sbjct: 980  IVGCRWIFTKKFNSDG-SLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAV 1039

Query: 85   QFDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVKGKEDMVCRL 129
                 I Q++V   FL G L + +YM+QP G+  K + D VCRL
Sbjct: 1040 DRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRL 1082

[Close]

BLAST of Cmc11g0290731 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 9.1e-15
Identity = 42/104 (40.38%), Postives = 66/104 (63.46%), Query Frame = 0


Query: 25   LIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 84
            ++  +WI+  K  + G S  +YKARL AKGY Q+  +D+ E FSPV++ +SIR++L + V
Sbjct: 997  IVGCRWIFTKKYNSDG-SLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAV 1056

Query: 85   QFDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVKGKEDMVCRL 129
                 I Q++V   FL G L + +YM+QP G+  K + + VC+L
Sbjct: 1057 DRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKL 1099

[Close]

BLAST of Cmc11g0290731 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.9e-04
Identity = 25/64 (39.06%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 25  LIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 84
           ++  KW++K K  + G +  + KARL AKG+ Q++ + F E +SPVVR ++IR IL +  
Sbjct: 68  ILGCKWVFKTKLHSDG-TLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQ 127

Query: 85  QFDM 89
           Q ++
Sbjct: 128 QLEV 130

[Close]

BLAST of Cmc11g0290731 vs. ExPASy TrEMBL
Match: A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.3e-43
Identity = 91/105 (86.67%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 25  LIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 84
           LI+SKWIYKIKPGT G+SKP+YKARL AKGYTQK+ VDFHEIFSPVVRHSSIRLIL I V
Sbjct: 866 LIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAV 925

Query: 85  QFDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVKGKEDMVCRLH 130
            FDMFIEQM+VT  FLHGELEEVIYMAQPKGY VKGKEDMVCRLH
Sbjct: 926 HFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLH 970

[Close]

BLAST of Cmc11g0290731 vs. ExPASy TrEMBL
Match: A0A5D3CTV2 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00910 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.3e-43
Identity = 91/105 (86.67%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 25  LIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 84
           LI+SKWIYKIKPGT G+SKP+YKARL AKGYTQK+ VDFHEIFSPVVRHSSIRLIL I V
Sbjct: 696 LIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAV 755

Query: 85  QFDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVKGKEDMVCRLH 130
            FDMFIEQM+VT  FLHGELEEVIYMAQPKGY VKGKEDMVCRLH
Sbjct: 756 HFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLH 800

[Close]

BLAST of Cmc11g0290731 vs. ExPASy TrEMBL
Match: A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.3e-43
Identity = 91/105 (86.67%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 25  LIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 84
           LI+SKWIYKIKPGT G+SKP+YKARL AKGYTQK+ VDFHEIFSPVVRHSSIRLIL I V
Sbjct: 866 LIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAV 925

Query: 85  QFDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVKGKEDMVCRLH 130
            FDMFIEQM+VT  FLHGELEEVIYMAQPKGY VKGKEDMVCRLH
Sbjct: 926 HFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVKGKEDMVCRLH 970

[Close]

BLAST of Cmc11g0290731 vs. ExPASy TrEMBL
Match: A0A5A7VGM4 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00240 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.1e-43
Identity = 92/105 (87.62%), Postives = 97/105 (92.38%), Query Frame = 0


Query: 25  LIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 84
           LI+SKWIYKIKPGT G+SKP+YKARL AKGYTQK+ VDFHEIFSPVVRHSSIRLIL IVV
Sbjct: 706 LIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIVV 765

Query: 85  QFDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVKGKEDMVCRLH 130
            FDMFIEQM+VT TFLHGELEEVIYMAQPKGY VKGKEDMV RLH
Sbjct: 766 HFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVFRLH 810

[Close]

BLAST of Cmc11g0290731 vs. ExPASy TrEMBL
Match: A0A5A7VF14 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold979G00520 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 7.6e-41
Identity = 87/105 (82.86%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 25  LIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 84
           LI+ KWIYKIKPGT GDSKP+YKARL AKGYTQK+ VDFHEIFSPVVRHSSIRLIL I +
Sbjct: 288 LIQLKWIYKIKPGTGGDSKPRYKARLVAKGYTQKEGVDFHEIFSPVVRHSSIRLILTIDI 347

Query: 85  QFDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVKGKEDMVCRLH 130
            F+MFIEQM+VT TFLHGELEEVIYMAQPKGY VKGKE  VCRL+
Sbjct: 348 HFNMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEHRVCRLY 392

[Close]

BLAST of Cmc11g0290731 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 85.9 bits (211), Expect = 2.6e-17
Identity = 43/94 (45.74%), Postives = 65/94 (69.15%), Query Frame = 0


Query: 26  IRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVVQ 85
           I  KW+YKIK  + G  + +YKARL AKGYTQ++ +DF E FSPV + +S++LIL I   
Sbjct: 127 IGCKWVYKIKYNSDGTIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAI 186

Query: 86  FDMFIEQMNVTITFLHGELEEVIYMAQPKGYGVK 120
           ++  + Q++++  FL+G+L+E IYM  P GY  +
Sbjct: 187 YNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAAR 219

[Close]

BLAST of Cmc11g0290731 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 47.0 bits (110), Expect = 1.3e-05
Identity = 25/64 (39.06%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 25  LIRSKWIYKIKPGTRGDSKPKYKARLEAKGYTQKDEVDFHEIFSPVVRHSSIRLILYIVV 84
           ++  KW++K K  + G +  + KARL AKG+ Q++ + F E +SPVVR ++IR IL +  
Sbjct: 68  ILGCKWVFKTKLHSDG-TLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQ 127

Query: 85  QFDM 89
           Q ++
Sbjct: 128 QLEV 130

The following BLAST results are available for this feature:

BLAST of Cmc11g0290731 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK13826.1	2.6e-43	86.67	putative polyprotein [Cucumis melo var. makuwa]	[more]
TYK25306.1	2.6e-43	86.67	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0050719.1	2.6e-43	86.67	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0067243.1	4.4e-43	87.62	retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa...	[more]
KAA0066633.1	1.6e-40	82.86	hypothetical protein E6C27_scaffold979G00520 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0290731 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	5.3e-23	51.43	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	4.3e-17	41.90	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	8.2e-16	42.31	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	9.1e-15	40.38	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P92520	1.9e-04	39.06	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc11g0290731 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DNU1	1.3e-43	86.67	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5D3CTV2	1.3e-43	86.67	Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488...	[more]
A0A5A7UB25	1.3e-43	86.67	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5A7VGM4	2.1e-43	87.62	Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku...	[more]
A0A5A7VF14	7.6e-41	82.86	Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Cmc11g0290731 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.6e-17	45.74	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	1.3e-05	39.06	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 26..128 e-value: 2.4E-26 score: 92.8
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 27..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0290731.1	Cmc11g0290731.1	mRNA