Cmc11g0290361 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0290361
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	La-related protein 6C
Location	CMiso1.1chr11: 5304848 .. 5308570 (+)
RNA-Seq Expression	Cmc11g0290361
Synteny	Cmc11g0290361

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAACACCGATTGAATTTCAAAAGTTCATTTTTCATTAAAAATAATTTATCCTTCAAACAAATCGTAAGCCACATTTTTTCGAGGAAGAAGAAGAAGCCATTAGAAAACAAGCGAAAAAGAAACAGAAAACAGAGCAAAAAGCAGAGAAGAAGAAGAAGAAAGAGAAAGCAGCAAAATTGGAAGGAAAGGCCACTTGGTTCACATTCCCACCTCGAAATTGCTAGTCAAACTCCAAACCAACGGCCCTTTGTCACAAAATCCTACCGTCCTTTCAATCATCACCTGAAAAATGCATATATTTGTGCGCGAAATGTGGCTGGATTTTCATAGTTCAGTTACTAAACTTCAGGGCAAATCATACACAAAGAGAGAGAGAGACGAAAAAACAGAAAAAAAAAAAAAAAAAAGAGAGTGAGATTTCAATAACCCACCTGCATTTCAAGCCCTACTTCCATTAATCGCAGGAAATTAAAAAAAAAAAAAGGGATTAAAGCATGGCGCAACTGAATCCAGAAGAGAAGTTTAGTGAAAACCATTCTGAAATGGAGGTCAATCAAGAAGCTATCACCAATAGCGATAGCGATGGAAGTAGTAATAGCAGTCTTGCTAATTTGGCCTTCAGATTTAATGCTCAAGCGCCTGAGTTTTTCCCTAGAACCCAACCCCAGATGCCTGTTACCGGTTATTTTCATCCCTATTTTCATTTTCTTGGTGGGGGGCCTGCTTCTTCAGATTGGTTCTTTATTGGGGACCAAGAACCTGCTTATTTGATCCCTAATCCCAACATTCAGCTCCCTAATTTCTCTAAGCATGCTCGTTCTGAGGAGATTCAGCAAAAAATCGTCAAACAGGTACTCCCTTCTCTTCTCTTCAAAATTATCAATCACTAAACTTTGGTTTGAATCACTCCACTGGGCACCATATGTACATATTTGTAGTCATGTTTCATAAAATGTCATTTTAGATACTCTTGGGGGATCTTGAATTGGCTGGGACATTTGTTTTCTTTTGTTTGTTTGGTTTTTTGCTGTTTGATAAGTAAAAGAAAATGCATTTTAGATACTCTGAACATGTGACTGGTATCATAATTAGTCCATTAGATAGGCTACTTTTTCATCTTTTGTAGTTTCTCACATCCTTCTTCCGTAAGTTTTCTCCTTAGATTTCTTCTTGATGTGTTTGATATTACTTTCTTTAGGCTCTGAAGTTGGTCTGTTAAGCTGAGAGTTTGCAAATTCCATGTGCATAAGTTCTATGTAACTATAATCCCATTTACGTGACCATTGTGATGTTTGGTCCTCGGTGAGGTTCCATGCTTCTCTTTGGTCTCAGGTCTCAGGTTTCGAAGACTTTTTTTGTAGGTAGAATCTTAATTGTAAACCCTTTCTTTAAAGGGATTTTATCAGCTTGTTTTTTTGTTGCTCTTGTATTCTCTTAAAAGACCTTCGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGTGGCTGGATTGAATCCTATATTCGAGTCACTTTCTTTCAGTAAATAGCAGAATCATGGATAGGGAACTATACTAGGGACCTACCTAATTGGATTGTAGAAATTTGAGAAAAAAGACATCCTGAGAAAGTGTGAACCTAATAGGGAAATGAAAACAGCCTTCCTTTACGACCCCCTCCTTCAATTACAACAGCCTTCCTATCCGAACCTCTCCCTTCAAAATCAATCCAAAGCTCACGTTAAGCCTACCCAACTTTGAACTCCATACTTTTTTTCAAGAAGGTTTATTATGTTCAGGTGCCAATGAGAGAATGTTGCTTTTTACAGGAGAACTTTCAGTATCTTATGGATGATTTCAATTTTACAGGTAGAATATCAGCTTAGTGACATGAGTCTTCTCGCAAATGAGACTCTTGCAAAACACATTAGTAAAGATCCCGATGGTTATGGTATGGCCTTTGCAATACTATTTATTACATGGATGCTTTAATTTAAGTTTTCGATATGCTTTAAACTGAATTCTTTTTTACTTTTTGTTTGTTTTTCATTCTGTTTATGAAGTTCCGATTTCTATTCTTTCATCGACAAAAAAAGTGAAGTCTCTCTCAACCAACAACAATTTCATAGTTCAAGCACTCCGCTCCTCTTCAAGGCTTGTAAGTTCCGTAGTAGAGCATTCCGTTTTTTACTCTTATTAATTATTGATCAATATCTGGTTCCGAAGGTTGTCAGTTCTGATGGGAAGAGAGTTAGGCGTAAGGTTCCATTCACAGACAAGGACAAAGAGGAATTGCTGGTAAGATCAGCCACTGTACAAATAATGCAGAACATTTCTCTTTAGCTGAACAGTGAGTAATATTTTGTTCTTCGATTTGCAGGCCCGCACAGTTGTTGCTGAGAATTTGCCAGAAAATCACTCGCATCACAATCTGGAGAAAATATTCAGTGTGGTTGGAAGGTAGTTTCGTTGACATTATCACTATATCATATTCTATCTGTTTAGATGTTAAACCGTCTGAGCATCATTCAATGGTGATATCTAACCAGTGTGAAAACCATCCGAATCTGTCATCCCCCGGAATCAAATCCCTGCTGCTCTAAAGGTGAATTGTTTGTCAGTAACAAGGTATTGTGAATCATGCTTTACTATAATGTATATAACCTAGATACTTCTCTTCACAATCTCTTTCTATAATCGGTACTTCATTTCTTTGAAGCTTCATGCACTCGTGGAGTTTGAGACAGTAGACTTAGCTGAAAGAGCGGTATGCATTTACTGTAGAGCTATAATGGATCAAGTTGCATATAGTAGTTCAATCTTCTTAATGTCTTTTCCACTTATAGATTGAGCAGTTAAACGATGAGAGAAACTGGAGGAAAGGACTCCGAGTAAGGCCACTGGTGAGACGCTCGGTAAGTGTAATAAGATGATGCAAAGGGTGGAGTTCTCGTTTACTATTTCATGCATTTTCACTATTTCCCTGCTCCTTACTATAGTACAGCAGCTCTAATCATTATTTCTATGTGAATGCAAAAACGGATAGCCGAAGTCTGTTCTAAAGAATCGAAAATCAGAATTCGATAGCGTTTTGGATGAAGATGATTCACCATCTTCTGTATCCGTTGAAGAGACCCCACTGCAAAATATCAATGACCTGATTGTCGATTGCAATGTACGTATTTTTATGGAAAGCTGTGTTGTCCTTGTATGATCTGTTTAGCAATTGATCAATATACATTATTTTCTGTTTTACTAGCCTGAAGAGAACTCTACATCATCGAAGAAGAGCTGGGGTCGAGGACGTGGGAAGGGCCGTGGACGAATTCATGGTCATCTCGATCGTAGTTATAGCTTGCCGGTTACATCATCTCTGCAGACGAGTGGGCAGGTTTTGTGTGAAGCATCTTCCAAACTGACTACAAAGAGTCCAAGAATGCCTGATGGGACTAAAGGTTTCACCATGGGAAGAGGCAAGCCATTAAGCTCTAAACCTCCTCTATTCAATAGGCTTGTTGACTGATAGAAGAAAATGTAGGAAAATCTCTGTTTGATTTATTGAGTAGGGTGGAAGGAACTATGAAATTTTTTTCGATGAGACTATTCACAATTTTGCTGCTACATTTTAATTATTTCATTTATGTATTATTTTTTTAAAAAATTTGGTAATAATGGAGATGTTTGATAGAGTTTTGGTTACTGTATAATGTGAAGTGGTTACCCATCATTCATTGGG

mRNA sequence

TCAAACACCGATTGAATTTCAAAAGTTCATTTTTCATTAAAAATAATTTATCCTTCAAACAAATCGTAAGCCACATTTTTTCGAGGAAGAAGAAGAAGCCATTAGAAAACAAGCGAAAAAGAAACAGAAAACAGAGCAAAAAGCAGAGAAGAAGAAGAAGAAAGAGAAAGCAGCAAAATTGGAAGGAAAGGCCACTTGGTTCACATTCCCACCTCGAAATTGCTAGTCAAACTCCAAACCAACGGCCCTTTGTCACAAAATCCTACCGTCCTTTCAATCATCACCTGAAAAATGCATATATTTGTGCGCGAAATGTGGCTGGATTTTCATAGTTCAGTTACTAAACTTCAGGGCAAATCATACACAAAGAGAGAGAGAGACGAAAAAACAGAAAAAAAAAAAAAAAAAAGAGAGTGAGATTTCAATAACCCACCTGCATTTCAAGCCCTACTTCCATTAATCGCAGGAAATTAAAAAAAAAAAAAGGGATTAAAGCATGGCGCAACTGAATCCAGAAGAGAAGTTTAGTGAAAACCATTCTGAAATGGAGGTCAATCAAGAAGCTATCACCAATAGCGATAGCGATGGAAGTAGTAATAGCAGTCTTGCTAATTTGGCCTTCAGATTTAATGCTCAAGCGCCTGAGTTTTTCCCTAGAACCCAACCCCAGATGCCTGTTACCGGTTATTTTCATCCCTATTTTCATTTTCTTGGTGGGGGGCCTGCTTCTTCAGATTGGTTCTTTATTGGGGACCAAGAACCTGCTTATTTGATCCCTAATCCCAACATTCAGCTCCCTAATTTCTCTAAGCATGCTCGTTCTGAGGAGATTCAGCAAAAAATCGTCAAACAGGTAGAATATCAGCTTAGTGACATGAGTCTTCTCGCAAATGAGACTCTTGCAAAACACATTAGTAAAGATCCCGATGGTTATGTTCCGATTTCTATTCTTTCATCGACAAAAAAAGTGAAGTCTCTCTCAACCAACAACAATTTCATAGTTCAAGCACTCCGCTCCTCTTCAAGGCTTGTTGTCAGTTCTGATGGGAAGAGAGTTAGGCGTAAGGTTCCATTCACAGACAAGGACAAAGAGGAATTGCTGGCCCGCACAGTTGTTGCTGAGAATTTGCCAGAAAATCACTCGCATCACAATCTGGAGAAAATATTCAGTGTGGTTGGAAGTGTGAAAACCATCCGAATCTGTCATCCCCCGGAATCAAATCCCTGCTGCTCTAAAGGTGAATTGTTTGTCAGTAACAAGCTTCATGCACTCGTGGAGTTTGAGACAGTAGACTTAGCTGAAAGAGCGATTGAGCAGTTAAACGATGAGAGAAACTGGAGGAAAGGACTCCGAGTAAGGCCACTGGTGAGACGCTCGCCGAAGTCTGTTCTAAAGAATCGAAAATCAGAATTCGATAGCGTTTTGGATGAAGATGATTCACCATCTTCTGTATCCGTTGAAGAGACCCCACTGCAAAATATCAATGACCTGATTGTCGATTGCAATCCTGAAGAGAACTCTACATCATCGAAGAAGAGCTGGGGTCGAGGACGTGGGAAGGGCCGTGGACGAATTCATGGTCATCTCGATCGTAGTTATAGCTTGCCGGTTACATCATCTCTGCAGACGAGTGGGCAGGTTTTGTGTGAAGCATCTTCCAAACTGACTACAAAGAGTCCAAGAATGCCTGATGGGACTAAAGGTTTCACCATGGGAAGAGGCAAGCCATTAAGCTCTAAACCTCCTCTATTCAATAGGCTTGTTGACTGATAGAAGAAAATGTAGGAAAATCTCTGTTTGATTTATTGAGTAGGGTGGAAGGAACTATGAAATTTTTTTCGATGAGACTATTCACAATTTTGCTGCTACATTTTAATTATTTCATTTATGTATTATTTTTTTAAAAAATTTGGTAATAATGGAGATGTTTGATAGAGTTTTGGTTACTGTATAATGTGAAGTGGTTACCCATCATTCATTGGG

Coding sequence (CDS)

ATGGCGCAACTGAATCCAGAAGAGAAGTTTAGTGAAAACCATTCTGAAATGGAGGTCAATCAAGAAGCTATCACCAATAGCGATAGCGATGGAAGTAGTAATAGCAGTCTTGCTAATTTGGCCTTCAGATTTAATGCTCAAGCGCCTGAGTTTTTCCCTAGAACCCAACCCCAGATGCCTGTTACCGGTTATTTTCATCCCTATTTTCATTTTCTTGGTGGGGGGCCTGCTTCTTCAGATTGGTTCTTTATTGGGGACCAAGAACCTGCTTATTTGATCCCTAATCCCAACATTCAGCTCCCTAATTTCTCTAAGCATGCTCGTTCTGAGGAGATTCAGCAAAAAATCGTCAAACAGGTAGAATATCAGCTTAGTGACATGAGTCTTCTCGCAAATGAGACTCTTGCAAAACACATTAGTAAAGATCCCGATGGTTATGTTCCGATTTCTATTCTTTCATCGACAAAAAAAGTGAAGTCTCTCTCAACCAACAACAATTTCATAGTTCAAGCACTCCGCTCCTCTTCAAGGCTTGTTGTCAGTTCTGATGGGAAGAGAGTTAGGCGTAAGGTTCCATTCACAGACAAGGACAAAGAGGAATTGCTGGCCCGCACAGTTGTTGCTGAGAATTTGCCAGAAAATCACTCGCATCACAATCTGGAGAAAATATTCAGTGTGGTTGGAAGTGTGAAAACCATCCGAATCTGTCATCCCCCGGAATCAAATCCCTGCTGCTCTAAAGGTGAATTGTTTGTCAGTAACAAGCTTCATGCACTCGTGGAGTTTGAGACAGTAGACTTAGCTGAAAGAGCGATTGAGCAGTTAAACGATGAGAGAAACTGGAGGAAAGGACTCCGAGTAAGGCCACTGGTGAGACGCTCGCCGAAGTCTGTTCTAAAGAATCGAAAATCAGAATTCGATAGCGTTTTGGATGAAGATGATTCACCATCTTCTGTATCCGTTGAAGAGACCCCACTGCAAAATATCAATGACCTGATTGTCGATTGCAATCCTGAAGAGAACTCTACATCATCGAAGAAGAGCTGGGGTCGAGGACGTGGGAAGGGCCGTGGACGAATTCATGGTCATCTCGATCGTAGTTATAGCTTGCCGGTTACATCATCTCTGCAGACGAGTGGGCAGGTTTTGTGTGAAGCATCTTCCAAACTGACTACAAAGAGTCCAAGAATGCCTGATGGGACTAAAGGTTTCACCATGGGAAGAGGCAAGCCATTAAGCTCTAAACCTCCTCTATTCAATAGGCTTGTTGACTGA

Protein sequence

MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLKNRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKPPLFNRLVD

Homology

[Close]

BLAST of Cmc11g0290361 vs. NCBI nr
Match: XP_008459218.1 (PREDICTED: la-related protein 6C [Cucumis melo] >XP_016902378.1 PREDICTED: la-related protein 6C [Cucumis melo] >KAA0046016.1 la-related protein 6C [Cucumis melo var. makuwa] >TYK13575.1 la-related protein 6C [Cucumis melo var. makuwa])

HSP 1 Score: 836.3 bits (2159), Expect = 1.2e-238
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP 60
           MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP
Sbjct: 1   MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP 60

Query: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120
           VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV
Sbjct: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120

Query: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180
           EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV
Sbjct: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180

Query: 181 SSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPE 240
           SSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPE
Sbjct: 181 SSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPE 240

Query: 241 SNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK 300
           SNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK
Sbjct: 241 SNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK 300

Query: 301 NRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKGRGRI 360
           NRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKGRGRI
Sbjct: 301 NRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKGRGRI 360

Query: 361 HGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKPPLFN 420
           HGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKPPLFN
Sbjct: 361 HGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKPPLFN 420

Query: 421 RLVD 425
           RLVD
Sbjct: 421 RLVD 424

[Close]

BLAST of Cmc11g0290361 vs. NCBI nr
Match: XP_004153773.2 (la-related protein 6C [Cucumis sativus] >KGN61778.2 hypothetical protein Csa_005956 [Cucumis sativus])

HSP 1 Score: 797.0 bits (2057), Expect = 8.1e-227
Identity = 409/424 (96.46%), Postives = 413/424 (97.41%), Query Frame = 0


Query: 1   MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP 60
           MAQLNPEEKFSENHSEME NQEAI NS+SDGSSNSSLANLAFRFNAQAPEFFPRTQ QMP
Sbjct: 1   MAQLNPEEKFSENHSEMEANQEAIINSESDGSSNSSLANLAFRFNAQAPEFFPRTQTQMP 60

Query: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120
           VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV
Sbjct: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120

Query: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180
           EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV
Sbjct: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180

Query: 181 SSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPE 240
           SSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPE
Sbjct: 181 SSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPE 240

Query: 241 SNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK 300
           SNPCCSKGELFVSNKLHALVEFET +LAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK
Sbjct: 241 SNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK 300

Query: 301 NRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKGRGRI 360
           NRKSEFDSVLDEDDSPS VSVEE+PLQNINDL VDCN EENSTS KKSWGRGRGKGRGRI
Sbjct: 301 NRKSEFDSVLDEDDSPSPVSVEESPLQNINDLNVDCNSEENSTSLKKSWGRGRGKGRGRI 360

Query: 361 HGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKPPLFN 420
           HG+LDRSYSLPVTSSLQTSGQVL EASSKLTTKSPRMPDGTKGFTMGRGKPLSSK PL N
Sbjct: 361 HGNLDRSYSLPVTSSLQTSGQVLSEASSKLTTKSPRMPDGTKGFTMGRGKPLSSK-PLVN 420

Query: 421 RLVD 425
           RLVD
Sbjct: 421 RLVD 423

[Close]

BLAST of Cmc11g0290361 vs. NCBI nr
Match: XP_038900552.1 (la-related protein 6C [Benincasa hispida])

HSP 1 Score: 725.7 bits (1872), Expect = 2.3e-205
Identity = 372/425 (87.53%), Postives = 400/425 (94.12%), Query Frame = 0


Query: 1   MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQ-PQM 60
           MAQ N E+K SEN  EMEV +E I   D DGSSNS++ANLAFRFNAQAPEFFPRTQ  QM
Sbjct: 1   MAQPNSEDKVSEN-PEMEVKKE-IIYGDGDGSSNSNIANLAFRFNAQAPEFFPRTQTTQM 60

Query: 61  PVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQ 120
           PVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKI+KQ
Sbjct: 61  PVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIIKQ 120

Query: 121 VEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLV 180
           VEYQLSDMSLLANETL+KHISKDPDGYV ISILS+TKKVKSLSTNN+FIVQALRSSSRLV
Sbjct: 121 VEYQLSDMSLLANETLSKHISKDPDGYVAISILSATKKVKSLSTNNSFIVQALRSSSRLV 180

Query: 181 VSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPP 240
           VS+DGK+VRRKVPFTDKD+EELL+R+VVAENLPENHSHHNLEKIFSVVGSVKTIRICHPP
Sbjct: 181 VSADGKKVRRKVPFTDKDREELLSRSVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPP 240

Query: 241 ESNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPKSVL 300
           +SNPCCSKGEL +SNKLHALVE+E+ +LAERA+E+LNDERNWRKGLRVR ++RRSPKSVL
Sbjct: 241 DSNPCCSKGELLISNKLHALVEYESPELAERAVEKLNDERNWRKGLRVRLMLRRSPKSVL 300

Query: 301 KNRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKGRGR 360
           K RKSEFDS+LD+DDSPS VSVEE+ L NI+DLIVDCN EENSTSSKKSWGRGRGKGRGR
Sbjct: 301 KTRKSEFDSILDDDDSPSPVSVEESSLPNISDLIVDCNSEENSTSSKKSWGRGRGKGRGR 360

Query: 361 IHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKPPLF 420
           IH HLDRSYSLPVTSSLQTSGQVLCEASSKLT+KSPRMPDGTKGFTMGRG+P SSK PLF
Sbjct: 361 IHSHLDRSYSLPVTSSLQTSGQVLCEASSKLTSKSPRMPDGTKGFTMGRGRPFSSK-PLF 420

Query: 421 NRLVD 425
           NRLVD
Sbjct: 421 NRLVD 422

[Close]

BLAST of Cmc11g0290361 vs. NCBI nr
Match: XP_022148536.1 (la-related protein 6C [Momordica charantia])

HSP 1 Score: 668.3 bits (1723), Expect = 4.4e-188
Identity = 347/428 (81.07%), Postives = 378/428 (88.32%), Query Frame = 0


Query: 1   MAQLNPEEKFSENHSEME----VNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQ 60
           MAQ N EEK SE   EME    VN     + D DG SNSS  NL F+FNAQAPEFFPR+Q
Sbjct: 1   MAQANSEEKVSET-PEMETKEAVNGNGNGDGDGDGGSNSS-GNLPFKFNAQAPEFFPRSQ 60

Query: 61  PQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKI 120
            Q+PVTGYFHPYFHFLGG PA+SDWFFIGDQEPAYLIPN  I LPNFSK+ RS++IQQKI
Sbjct: 61  TQVPVTGYFHPYFHFLGGAPATSDWFFIGDQEPAYLIPNATIPLPNFSKNVRSDDIQQKI 120

Query: 121 VKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSS 180
           VKQVEYQ SDMSLLANE+LAKHISKDPDGYVPIS++SSTKKVKSLSTNNN IVQALRSSS
Sbjct: 121 VKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSS 180

Query: 181 RLVVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRIC 240
           RLVVSSDGK+VRRK PFTDKDKEELL+RTVV ENLP+NHSHHNLEKIFSV+GSVKTIRIC
Sbjct: 181 RLVVSSDGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRIC 240

Query: 241 HPPESNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPK 300
           HPPESNPCCSKGELF+SNKLHALVE+ETV+LAERA E+LNDERNWRKGLRVR L+RRSPK
Sbjct: 241 HPPESNPCCSKGELFISNKLHALVEYETVELAERAAEKLNDERNWRKGLRVRLLLRRSPK 300

Query: 301 SVLKNRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKG 360
           SVLK RKSEFDS+LDEDDSPS VS+EE  L NI +LIVDCN EENST+SKK WGRGRGKG
Sbjct: 301 SVLKTRKSEFDSILDEDDSPSPVSIEEPSLSNITELIVDCNSEENSTASKKGWGRGRGKG 360

Query: 361 RGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKP 420
           RGRIH H DR  S+PVT  +Q S QV+CEAS+KLT+KSPRMPDGTKGFTMGRGKPLSSK 
Sbjct: 361 RGRIHSHSDR--SVPVT-QVQASSQVVCEASTKLTSKSPRMPDGTKGFTMGRGKPLSSK- 420

Query: 421 PLFNRLVD 425
           P+FNRLV+
Sbjct: 421 PVFNRLVE 422

[Close]

BLAST of Cmc11g0290361 vs. NCBI nr
Match: XP_023007490.1 (la-related protein 6C [Cucurbita maxima])

HSP 1 Score: 661.4 bits (1705), Expect = 5.3e-186
Identity = 339/416 (81.49%), Postives = 380/416 (91.35%), Query Frame = 0


Query: 1   MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP 60
           MA+ N EEK +EN  EMEV +EA+ N D  GSSNS+  NL+F+FNAQAPEFFPR+Q QMP
Sbjct: 1   MAEANSEEKVNEN-PEMEV-KEAV-NGDGVGSSNSN-GNLSFKFNAQAPEFFPRSQTQMP 60

Query: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120
           VTGYFHPYFHFLGG PA+SDWFFIGDQEP YLIPNP I LPNFSK+ARSE+IQQKIVKQV
Sbjct: 61  VTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNPTIPLPNFSKNARSEDIQQKIVKQV 120

Query: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180
           EYQ SDMSLLANE+LAK+ISKDPDGYVPIS++SSTKKVKSLSTNNN IVQALRSSS+LVV
Sbjct: 121 EYQFSDMSLLANESLAKNISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSSKLVV 180

Query: 181 SSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPE 240
           S+DGK+V+RK PFTDKDKEELL+RTVV ENLP+NHSHHNLEKIFSV+GSVKTIRICHPPE
Sbjct: 181 SADGKKVKRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICHPPE 240

Query: 241 SNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK 300
           SNPCCSKGELF+SNKLHALVE+ETV+LA+RA E+LNDERNWRKGLRVR L+RRSPKSVLK
Sbjct: 241 SNPCCSKGELFISNKLHALVEYETVELADRAAEKLNDERNWRKGLRVRLLLRRSPKSVLK 300

Query: 301 NRKSEFDSVLDEDDSPSSVSVE-ETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKGRGR 360
            RKSEF+S+LDEDDSPS VS+E E+P  NI +LI D + EENSTSSKK WGRGRGKGRGR
Sbjct: 301 TRKSEFESILDEDDSPSPVSIEQESPQSNIAELITDFSSEENSTSSKKGWGRGRGKGRGR 360

Query: 361 IHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSK 416
           +H HLDRSYSLPVT ++Q+S Q+LCEASSKLT+KSPRMPDGTKGFTMGRGKPL+SK
Sbjct: 361 VHNHLDRSYSLPVT-AMQSSSQILCEASSKLTSKSPRMPDGTKGFTMGRGKPLNSK 411

[Close]

BLAST of Cmc11g0290361 vs. ExPASy Swiss-Prot
Match: Q9LHL3 (La-related protein 6C OS=Arabidopsis thaliana OX=3702 GN=LARP6C PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 2.5e-106
Identity = 224/448 (50.00%), Postives = 298/448 (66.52%), Query Frame = 0


Query: 18  EVNQEAITNSDSDGSSNSSLAN-LAFRFNAQAPEFFPRTQ-----PQM-PVTGYFHPYFH 77
           EV          DG   SS A   AF+FNAQAPEF PR+      PQ+ PV+GYF+P FH
Sbjct: 8   EVESVTTEKKRLDGGGGSSGAQATAFKFNAQAPEFVPRSHTTAPAPQVSPVSGYFYPCFH 67

Query: 78  FLGG-----------------GPASSDWFFIGDQEP------------AYLIPNPNIQLP 137
           + GG                 G  SSDW ++G  +P            A+ I NP +Q P
Sbjct: 68  YNGGCIGGCGGGVCGGGGTGVGTQSSDWIYVGGGDPTAQHQHVHDPAAAFYISNPAVQFP 127

Query: 138 ------NFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSST 197
                 + SK+  S++++ KIVKQVEYQ +DMSLLANE+++KHISKDP+GYVP+S ++ST
Sbjct: 128 ASQNSSSSSKNLLSDDLRLKIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIAST 187

Query: 198 KKVKSLSTNNNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENH 257
           KK+K+L++N++ +  ALRSSS+LVVS DGK+V+R   FTD+D+EEL  RTVVAENLP++H
Sbjct: 188 KKIKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAENLPDDH 247

Query: 258 SHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETVDLAERAIEQL 317
           S+ NLEKIF VVG+VK IRICHPPESN    KG+  +SNK+HAL+E++   +A++A+E+L
Sbjct: 248 SYQNLEKIFGVVGNVKAIRICHPPESNSSRPKGDFLMSNKIHALIEYDNTVIADKAVEKL 307

Query: 318 NDERNWRKGLRVRPLVRRSPKSVLKNRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVD 377
           NDERNWRKGLRVR L+R SPKSVLKNR++ FD +L +D+ PS  S E++P  ++ +  +D
Sbjct: 308 NDERNWRKGLRVRLLLRCSPKSVLKNRRN-FDGILIDDELPSYESGEDSPRLHLTESQLD 367

Query: 378 CNPEENSTSSKKSWGRGRGKGRGR-----IHGHLDRSYSLPVTSSLQTSGQVLCEASS-K 418
            + ++N+      WG+GRGKGRGR       G   RS+ + +  SL        E+SS K
Sbjct: 368 NDGDDNNVGG--LWGKGRGKGRGRSPRSYAVGGGGRSFGIGLGVSLGIPSLGSHESSSPK 427

[Close]

BLAST of Cmc11g0290361 vs. ExPASy Swiss-Prot
Match: O80567 (La-related protein 6B OS=Arabidopsis thaliana OX=3702 GN=LARP6B PE=1 SV=2)

HSP 1 Score: 209.1 bits (531), Expect = 9.5e-53
Identity = 137/361 (37.95%), Postives = 196/361 (54.29%), Query Frame = 0


Query: 104 SKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLST 163
           SK    E+  QKIV QVEY  SD++L   + L + I KDP+GYVPI +++S KK+K++  
Sbjct: 185 SKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVIN 244

Query: 164 NNNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKI 223
           NN+ +   L++S++L VS DGK+VRR  P T+   EEL +R +VAENLPE+H + NL KI
Sbjct: 245 NNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCYQNLMKI 304

Query: 224 FSVVGSVKTIRICHPPES---------NPCCSKGELFVSNKLHALVEFETVDLAERAIEQ 283
           FS VGSVK IR C P  +         +   S G LF SNK+HA VE+E V+LAERA+ +
Sbjct: 305 FSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLF-SNKVHAFVEYEIVELAERAVTE 364

Query: 284 LNDERNWRKGLRVRPLVR---RSPKSVLKNRKSEFDSVLDEDDSPSSVSVEETPLQNIND 343
           L++  NWR GL+VR +++   + PK      +   D+ ++ ++  ++ S E+ P++  +D
Sbjct: 365 LSEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTS-EQQPIEKQSD 424

Query: 344 LIVDCNPE----------------ENSTSSKKSWGRGRGKGRGR---------------- 403
              DC+ E                E +   +K   RGRGKGRGR                
Sbjct: 425 ---DCSGEWDTHMQEQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHN 484

Query: 404 -IHGHLDRS-------YSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKP 413
             H H  R        + +    S      +      K     PRMPDGT+GF+MGRGKP
Sbjct: 485 QNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRGKP 540

[Close]

BLAST of Cmc11g0290361 vs. ExPASy Swiss-Prot
Match: Q94A38 (La-related protein 6A OS=Arabidopsis thaliana OX=3702 GN=LARP6A PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-39
Identity = 110/313 (35.14%), Postives = 170/313 (54.31%), Query Frame = 0


Query: 110 EEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIV 169
           +E+ QKI++QVEY  SD +L  ++ L   + ++  G+VPIS +++  K+K L+ ++  IV
Sbjct: 101 DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIV 160

Query: 170 QALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGS 229
            AL+ SS LVVS+D K+V+R  P  +    ++   TV+ ENLPE+HS+ N+ +IF   GS
Sbjct: 161 SALKESSFLVVSADEKKVKRLSPLPEIRDPKIF--TVLVENLPEDHSNENIREIFGKAGS 220

Query: 230 VKTIRICHP--PESNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRV 289
           +K++ IC P   E +    K E F+  +LHA VE+ETV+ AE+A   LN+E++WR GLRV
Sbjct: 221 IKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLRV 280

Query: 290 RPL--------VRRSPKSVLKNRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPE 349
           + L         RR  +  +   K     V D+     +    E     ++      + +
Sbjct: 281 KLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQNHRLHHSDNPADDD 340

Query: 350 ENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPD 409
             +    K+  +GR  G+GR   H   +     T+S  +         SK     PRMPD
Sbjct: 341 GGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSSHPNYHPVEVSK-RPPGPRMPD 400

Query: 410 GTKGFTMGRGKPL 413
           GT+GFTMGRGK +
Sbjct: 401 GTRGFTMGRGKAI 410

[Close]

BLAST of Cmc11g0290361 vs. ExPASy Swiss-Prot
Match: Q05CL8 (La-related protein 7 OS=Mus musculus OX=10090 GN=Larp7 PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 6.2e-20
Identity = 65/173 (37.57%), Postives = 98/173 (56.65%), Query Frame = 0


Query: 105 KHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTN 164
           K +R +++   I KQV++   D +L  ++ L + I K  DGYV IS+L S  K+K L+T+
Sbjct: 21  KRSRVKQVLADIAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTD 80

Query: 165 NNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIF 224
              I +AL+SSS + +  +G R+RRK P  ++ K+E   RTV  E LP+N +H  +E++F
Sbjct: 81  GKLIARALKSSSVVELDLEGTRIRRKKPLGERPKDE-EERTVYVELLPKNVTHSWIERVF 140

Query: 225 SVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLND 278
              G+V  I I H   +             K  A VEFET + A +AIE LN+
Sbjct: 141 GKCGNVVYISIPHYKSTG----------DPKGFAFVEFETKEQAAKAIEFLNN 182

[Close]

BLAST of Cmc11g0290361 vs. ExPASy Swiss-Prot
Match: Q5XI01 (La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 8.1e-20
Identity = 65/173 (37.57%), Postives = 97/173 (56.07%), Query Frame = 0


Query: 105 KHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTN 164
           K +R +++   I KQV++   D +L  +  L + I K  DGYV IS+L S  K+K L+T+
Sbjct: 22  KRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTD 81

Query: 165 NNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIF 224
              I +AL+SSS + +  +G R+RRK P  ++ K+E   RTV  E LP+N +H  +E++F
Sbjct: 82  GKLIARALKSSSVVELDLEGTRIRRKKPLGERPKDE-EERTVYVELLPKNVTHSWIERVF 141

Query: 225 SVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLND 278
              G+V  I I H   +             K  A VEFET + A +AIE LN+
Sbjct: 142 GKCGNVVYISIPHYKSTG----------DPKGFAFVEFETKEQAAKAIEFLNN 183

[Close]

BLAST of Cmc11g0290361 vs. ExPASy TrEMBL
Match: A0A1S4E2C7 (la-related protein 6C OS=Cucumis melo OX=3656 GN=LOC103498409 PE=4 SV=1)

HSP 1 Score: 836.3 bits (2159), Expect = 5.8e-239
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP 60
           MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP
Sbjct: 1   MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP 60

Query: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120
           VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV
Sbjct: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120

Query: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180
           EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV
Sbjct: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180

Query: 181 SSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPE 240
           SSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPE
Sbjct: 181 SSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPE 240

Query: 241 SNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK 300
           SNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK
Sbjct: 241 SNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK 300

Query: 301 NRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKGRGRI 360
           NRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKGRGRI
Sbjct: 301 NRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKGRGRI 360

Query: 361 HGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKPPLFN 420
           HGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKPPLFN
Sbjct: 361 HGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKPPLFN 420

Query: 421 RLVD 425
           RLVD
Sbjct: 421 RLVD 424

[Close]

BLAST of Cmc11g0290361 vs. ExPASy TrEMBL
Match: A0A5A7TV41 (La-related protein 6C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00570 PE=4 SV=1)

HSP 1 Score: 836.3 bits (2159), Expect = 5.8e-239
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP 60
           MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP
Sbjct: 1   MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP 60

Query: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120
           VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV
Sbjct: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120

Query: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180
           EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV
Sbjct: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180

Query: 181 SSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPE 240
           SSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPE
Sbjct: 181 SSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPE 240

Query: 241 SNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK 300
           SNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK
Sbjct: 241 SNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK 300

Query: 301 NRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKGRGRI 360
           NRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKGRGRI
Sbjct: 301 NRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKGRGRI 360

Query: 361 HGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKPPLFN 420
           HGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKPPLFN
Sbjct: 361 HGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKPPLFN 420

Query: 421 RLVD 425
           RLVD
Sbjct: 421 RLVD 424

[Close]

BLAST of Cmc11g0290361 vs. ExPASy TrEMBL
Match: A0A0A0LIU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G235610 PE=4 SV=1)

HSP 1 Score: 783.9 bits (2023), Expect = 3.4e-223
Identity = 409/447 (91.50%), Postives = 413/447 (92.39%), Query Frame = 0


Query: 1   MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP 60
           MAQLNPEEKFSENHSEME NQEAI NS+SDGSSNSSLANLAFRFNAQAPEFFPRTQ QMP
Sbjct: 1   MAQLNPEEKFSENHSEMEANQEAIINSESDGSSNSSLANLAFRFNAQAPEFFPRTQTQMP 60

Query: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120
           VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV
Sbjct: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120

Query: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRL-- 180
           EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRL  
Sbjct: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVS 180

Query: 181 ---------------------VVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSH 240
                                VVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSH
Sbjct: 181 SVVEHSVLYSLLIIDQYLVPKVVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSH 240

Query: 241 HNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLND 300
           HNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFET +LAERAIEQLND
Sbjct: 241 HNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLND 300

Query: 301 ERNWRKGLRVRPLVRRSPKSVLKNRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCN 360
           ERNWRKGLRVRPLVRRSPKSVLKNRKSEFDSVLDEDDSPS VSVEE+PLQNINDL VDCN
Sbjct: 301 ERNWRKGLRVRPLVRRSPKSVLKNRKSEFDSVLDEDDSPSPVSVEESPLQNINDLNVDCN 360

Query: 361 PEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRM 420
            EENSTS KKSWGRGRGKGRGRIHG+LDRSYSLPVTSSLQTSGQVL EASSKLTTKSPRM
Sbjct: 361 SEENSTSLKKSWGRGRGKGRGRIHGNLDRSYSLPVTSSLQTSGQVLSEASSKLTTKSPRM 420

Query: 421 PDGTKGFTMGRGKPLSSKPPLFNRLVD 425
           PDGTKGFTMGRGKPLSSK PL NRLVD
Sbjct: 421 PDGTKGFTMGRGKPLSSK-PLVNRLVD 446

[Close]

BLAST of Cmc11g0290361 vs. ExPASy TrEMBL
Match: A0A6J1D5P1 (la-related protein 6C OS=Momordica charantia OX=3673 GN=LOC111017163 PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 2.1e-188
Identity = 347/428 (81.07%), Postives = 378/428 (88.32%), Query Frame = 0


Query: 1   MAQLNPEEKFSENHSEME----VNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQ 60
           MAQ N EEK SE   EME    VN     + D DG SNSS  NL F+FNAQAPEFFPR+Q
Sbjct: 1   MAQANSEEKVSET-PEMETKEAVNGNGNGDGDGDGGSNSS-GNLPFKFNAQAPEFFPRSQ 60

Query: 61  PQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKI 120
            Q+PVTGYFHPYFHFLGG PA+SDWFFIGDQEPAYLIPN  I LPNFSK+ RS++IQQKI
Sbjct: 61  TQVPVTGYFHPYFHFLGGAPATSDWFFIGDQEPAYLIPNATIPLPNFSKNVRSDDIQQKI 120

Query: 121 VKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSS 180
           VKQVEYQ SDMSLLANE+LAKHISKDPDGYVPIS++SSTKKVKSLSTNNN IVQALRSSS
Sbjct: 121 VKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSS 180

Query: 181 RLVVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRIC 240
           RLVVSSDGK+VRRK PFTDKDKEELL+RTVV ENLP+NHSHHNLEKIFSV+GSVKTIRIC
Sbjct: 181 RLVVSSDGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRIC 240

Query: 241 HPPESNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPK 300
           HPPESNPCCSKGELF+SNKLHALVE+ETV+LAERA E+LNDERNWRKGLRVR L+RRSPK
Sbjct: 241 HPPESNPCCSKGELFISNKLHALVEYETVELAERAAEKLNDERNWRKGLRVRLLLRRSPK 300

Query: 301 SVLKNRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKG 360
           SVLK RKSEFDS+LDEDDSPS VS+EE  L NI +LIVDCN EENST+SKK WGRGRGKG
Sbjct: 301 SVLKTRKSEFDSILDEDDSPSPVSIEEPSLSNITELIVDCNSEENSTASKKGWGRGRGKG 360

Query: 361 RGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKP 420
           RGRIH H DR  S+PVT  +Q S QV+CEAS+KLT+KSPRMPDGTKGFTMGRGKPLSSK 
Sbjct: 361 RGRIHSHSDR--SVPVT-QVQASSQVVCEASTKLTSKSPRMPDGTKGFTMGRGKPLSSK- 420

Query: 421 PLFNRLVD 425
           P+FNRLV+
Sbjct: 421 PVFNRLVE 422

[Close]

BLAST of Cmc11g0290361 vs. ExPASy TrEMBL
Match: A0A6J1L340 (la-related protein 6C OS=Cucurbita maxima OX=3661 GN=LOC111499965 PE=4 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 2.6e-186
Identity = 339/416 (81.49%), Postives = 380/416 (91.35%), Query Frame = 0


Query: 1   MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP 60
           MA+ N EEK +EN  EMEV +EA+ N D  GSSNS+  NL+F+FNAQAPEFFPR+Q QMP
Sbjct: 1   MAEANSEEKVNEN-PEMEV-KEAV-NGDGVGSSNSN-GNLSFKFNAQAPEFFPRSQTQMP 60

Query: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120
           VTGYFHPYFHFLGG PA+SDWFFIGDQEP YLIPNP I LPNFSK+ARSE+IQQKIVKQV
Sbjct: 61  VTGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNPTIPLPNFSKNARSEDIQQKIVKQV 120

Query: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180
           EYQ SDMSLLANE+LAK+ISKDPDGYVPIS++SSTKKVKSLSTNNN IVQALRSSS+LVV
Sbjct: 121 EYQFSDMSLLANESLAKNISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSSKLVV 180

Query: 181 SSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPE 240
           S+DGK+V+RK PFTDKDKEELL+RTVV ENLP+NHSHHNLEKIFSV+GSVKTIRICHPPE
Sbjct: 181 SADGKKVKRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICHPPE 240

Query: 241 SNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK 300
           SNPCCSKGELF+SNKLHALVE+ETV+LA+RA E+LNDERNWRKGLRVR L+RRSPKSVLK
Sbjct: 241 SNPCCSKGELFISNKLHALVEYETVELADRAAEKLNDERNWRKGLRVRLLLRRSPKSVLK 300

Query: 301 NRKSEFDSVLDEDDSPSSVSVE-ETPLQNINDLIVDCNPEENSTSSKKSWGRGRGKGRGR 360
            RKSEF+S+LDEDDSPS VS+E E+P  NI +LI D + EENSTSSKK WGRGRGKGRGR
Sbjct: 301 TRKSEFESILDEDDSPSPVSIEQESPQSNIAELITDFSSEENSTSSKKGWGRGRGKGRGR 360

Query: 361 IHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKPLSSK 416
           +H HLDRSYSLPVT ++Q+S Q+LCEASSKLT+KSPRMPDGTKGFTMGRGKPL+SK
Sbjct: 361 VHNHLDRSYSLPVT-AMQSSSQILCEASSKLTSKSPRMPDGTKGFTMGRGKPLNSK 411

[Close]

BLAST of Cmc11g0290361 vs. TAIR 10
Match: AT3G19090.1 (RNA-binding protein )

HSP 1 Score: 387.1 bits (993), Expect = 1.8e-107
Identity = 224/448 (50.00%), Postives = 298/448 (66.52%), Query Frame = 0


Query: 18  EVNQEAITNSDSDGSSNSSLAN-LAFRFNAQAPEFFPRTQ-----PQM-PVTGYFHPYFH 77
           EV          DG   SS A   AF+FNAQAPEF PR+      PQ+ PV+GYF+P FH
Sbjct: 8   EVESVTTEKKRLDGGGGSSGAQATAFKFNAQAPEFVPRSHTTAPAPQVSPVSGYFYPCFH 67

Query: 78  FLGG-----------------GPASSDWFFIGDQEP------------AYLIPNPNIQLP 137
           + GG                 G  SSDW ++G  +P            A+ I NP +Q P
Sbjct: 68  YNGGCIGGCGGGVCGGGGTGVGTQSSDWIYVGGGDPTAQHQHVHDPAAAFYISNPAVQFP 127

Query: 138 ------NFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSST 197
                 + SK+  S++++ KIVKQVEYQ +DMSLLANE+++KHISKDP+GYVP+S ++ST
Sbjct: 128 ASQNSSSSSKNLLSDDLRLKIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIAST 187

Query: 198 KKVKSLSTNNNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENH 257
           KK+K+L++N++ +  ALRSSS+LVVS DGK+V+R   FTD+D+EEL  RTVVAENLP++H
Sbjct: 188 KKIKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAENLPDDH 247

Query: 258 SHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETVDLAERAIEQL 317
           S+ NLEKIF VVG+VK IRICHPPESN    KG+  +SNK+HAL+E++   +A++A+E+L
Sbjct: 248 SYQNLEKIFGVVGNVKAIRICHPPESNSSRPKGDFLMSNKIHALIEYDNTVIADKAVEKL 307

Query: 318 NDERNWRKGLRVRPLVRRSPKSVLKNRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVD 377
           NDERNWRKGLRVR L+R SPKSVLKNR++ FD +L +D+ PS  S E++P  ++ +  +D
Sbjct: 308 NDERNWRKGLRVRLLLRCSPKSVLKNRRN-FDGILIDDELPSYESGEDSPRLHLTESQLD 367

Query: 378 CNPEENSTSSKKSWGRGRGKGRGR-----IHGHLDRSYSLPVTSSLQTSGQVLCEASS-K 418
            + ++N+      WG+GRGKGRGR       G   RS+ + +  SL        E+SS K
Sbjct: 368 NDGDDNNVGG--LWGKGRGKGRGRSPRSYAVGGGGRSFGIGLGVSLGIPSLGSHESSSPK 427

[Close]

BLAST of Cmc11g0290361 vs. TAIR 10
Match: AT2G43970.1 (RNA-binding protein )

HSP 1 Score: 209.1 bits (531), Expect = 6.7e-54
Identity = 137/361 (37.95%), Postives = 196/361 (54.29%), Query Frame = 0


Query: 104 SKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLST 163
           SK    E+  QKIV QVEY  SD++L   + L + I KDP+GYVPI +++S KK+K++  
Sbjct: 185 SKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVIN 244

Query: 164 NNNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKI 223
           NN+ +   L++S++L VS DGK+VRR  P T+   EEL +R +VAENLPE+H + NL KI
Sbjct: 245 NNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCYQNLMKI 304

Query: 224 FSVVGSVKTIRICHPPES---------NPCCSKGELFVSNKLHALVEFETVDLAERAIEQ 283
           FS VGSVK IR C P  +         +   S G LF SNK+HA VE+E V+LAERA+ +
Sbjct: 305 FSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLF-SNKVHAFVEYEIVELAERAVTE 364

Query: 284 LNDERNWRKGLRVRPLVR---RSPKSVLKNRKSEFDSVLDEDDSPSSVSVEETPLQNIND 343
           L++  NWR GL+VR +++   + PK      +   D+ ++ ++  ++ S E+ P++  +D
Sbjct: 365 LSEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTS-EQQPIEKQSD 424

Query: 344 LIVDCNPE----------------ENSTSSKKSWGRGRGKGRGR---------------- 403
              DC+ E                E +   +K   RGRGKGRGR                
Sbjct: 425 ---DCSGEWDTHMQEQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHN 484

Query: 404 -IHGHLDRS-------YSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKP 413
             H H  R        + +    S      +      K     PRMPDGT+GF+MGRGKP
Sbjct: 485 QNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRGKP 540

[Close]

BLAST of Cmc11g0290361 vs. TAIR 10
Match: AT2G43970.2 (RNA-binding protein )

HSP 1 Score: 176.4 bits (446), Expect = 4.8e-44
Identity = 126/361 (34.90%), Postives = 182/361 (50.42%), Query Frame = 0


Query: 104 SKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLST 163
           SK    E+  QKIV QVEY  SD++L   + L + I KDP+GYVPI +++S KK+K++  
Sbjct: 185 SKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVIN 244

Query: 164 NNNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKI 223
           NN+ +   L++S++L VS DGK+VRR  P T+   EEL +R +VAENLPE+H + NL KI
Sbjct: 245 NNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCYQNLMKI 304

Query: 224 FSVVGSVKTIRICHPPES---------NPCCSKGELFVSNKLHALVEFETVDLAERAIEQ 283
           FS VGSVK IR C P  +         +   S G LF SNK                + +
Sbjct: 305 FSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLF-SNK----------------VTE 364

Query: 284 LNDERNWRKGLRVRPLVR---RSPKSVLKNRKSEFDSVLDEDDSPSSVSVEETPLQNIND 343
           L++  NWR GL+VR +++   + PK      +   D+ ++ ++  ++ S E+ P++  +D
Sbjct: 365 LSEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTS-EQQPIEKQSD 424

Query: 344 LIVDCNPE----------------ENSTSSKKSWGRGRGKGRGR---------------- 403
              DC+ E                E +   +K   RGRGKGRGR                
Sbjct: 425 ---DCSGEWDTHMQEQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHN 484

Query: 404 -IHGHLDRS-------YSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGTKGFTMGRGKP 413
             H H  R        + +    S      +      K     PRMPDGT+GF+MGRGKP
Sbjct: 485 QNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRGKP 524

[Close]

BLAST of Cmc11g0290361 vs. TAIR 10
Match: AT5G46250.1 (RNA-binding protein )

HSP 1 Score: 165.6 bits (418), Expect = 8.5e-41
Identity = 110/313 (35.14%), Postives = 170/313 (54.31%), Query Frame = 0


Query: 110 EEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIV 169
           +E+ QKI++QVEY  SD +L  ++ L   + ++  G+VPIS +++  K+K L+ ++  IV
Sbjct: 101 DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIV 160

Query: 170 QALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGS 229
            AL+ SS LVVS+D K+V+R  P  +    ++   TV+ ENLPE+HS+ N+ +IF   GS
Sbjct: 161 SALKESSFLVVSADEKKVKRLSPLPEIRDPKIF--TVLVENLPEDHSNENIREIFGKAGS 220

Query: 230 VKTIRICHP--PESNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRV 289
           +K++ IC P   E +    K E F+  +LHA VE+ETV+ AE+A   LN+E++WR GLRV
Sbjct: 221 IKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLRV 280

Query: 290 RPL--------VRRSPKSVLKNRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCNPE 349
           + L         RR  +  +   K     V D+     +    E     ++      + +
Sbjct: 281 KLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQNHRLHHSDNPADDD 340

Query: 350 ENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPD 409
             +    K+  +GR  G+GR   H   +     T+S  +         SK     PRMPD
Sbjct: 341 GGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSSHPNYHPVEVSK-RPPGPRMPD 400

Query: 410 GTKGFTMGRGKPL 413
           GT+GFTMGRGK +
Sbjct: 401 GTRGFTMGRGKAI 410

[Close]

BLAST of Cmc11g0290361 vs. TAIR 10
Match: AT5G46250.3 (RNA-binding protein )

HSP 1 Score: 146.0 bits (367), Expect = 7.0e-35
Identity = 79/189 (41.80%), Postives = 125/189 (66.14%), Query Frame = 0


Query: 110 EEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIV 169
           +E+ QKI++QVEY  SD +L  ++ L   + ++  G+VPIS +++  K+K L+ ++  IV
Sbjct: 101 DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIV 160

Query: 170 QALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGS 229
            AL+ SS LVVS+D K+V+R  P  +    ++   TV+ ENLPE+HS+ N+ +IF   GS
Sbjct: 161 SALKESSFLVVSADEKKVKRLSPLPEIRDPKIF--TVLVENLPEDHSNENIREIFGKAGS 220

Query: 230 VKTIRICHP--PESNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRV 289
           +K++ IC P   E +    K E F+  +LHA VE+ETV+ AE+A+  LN+E++WR GLRV
Sbjct: 221 IKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAVTTLNNEQDWRNGLRV 280

Query: 290 RPLVRRSPK 297
           + L + + K
Sbjct: 281 KLLEQAAGK 287

The following BLAST results are available for this feature:

BLAST of Cmc11g0290361 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459218.1	1.2e-238	100.00	PREDICTED: la-related protein 6C [Cucumis melo] >XP_016902378.1 PREDICTED: la-re...	[more]
XP_004153773.2	8.1e-227	96.46	la-related protein 6C [Cucumis sativus] >KGN61778.2 hypothetical protein Csa_005...	[more]
XP_038900552.1	2.3e-205	87.53	la-related protein 6C [Benincasa hispida]	[more]
XP_022148536.1	4.4e-188	81.07	la-related protein 6C [Momordica charantia]	[more]
XP_023007490.1	5.3e-186	81.49	la-related protein 6C [Cucurbita maxima]	[more]

BLAST of Cmc11g0290361 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHL3	2.5e-106	50.00	La-related protein 6C OS=Arabidopsis thaliana OX=3702 GN=LARP6C PE=3 SV=1	[more]
O80567	9.5e-53	37.95	La-related protein 6B OS=Arabidopsis thaliana OX=3702 GN=LARP6B PE=1 SV=2	[more]
Q94A38	1.2e-39	35.14	La-related protein 6A OS=Arabidopsis thaliana OX=3702 GN=LARP6A PE=2 SV=1	[more]
Q05CL8	6.2e-20	37.57	La-related protein 7 OS=Mus musculus OX=10090 GN=Larp7 PE=1 SV=2	[more]
Q5XI01	8.1e-20	37.57	La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2	[more]

BLAST of Cmc11g0290361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E2C7	5.8e-239	100.00	la-related protein 6C OS=Cucumis melo OX=3656 GN=LOC103498409 PE=4 SV=1	[more]
A0A5A7TV41	5.8e-239	100.00	La-related protein 6C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29...	[more]
A0A0A0LIU3	3.4e-223	91.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G235610 PE=4 SV=1	[more]
A0A6J1D5P1	2.1e-188	81.07	la-related protein 6C OS=Momordica charantia OX=3673 GN=LOC111017163 PE=4 SV=1	[more]
A0A6J1L340	2.6e-186	81.49	la-related protein 6C OS=Cucurbita maxima OX=3661 GN=LOC111499965 PE=4 SV=1	[more]

BLAST of Cmc11g0290361 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19090.1	1.8e-107	50.00	RNA-binding protein	[more]
AT2G43970.1	6.7e-54	37.95	RNA-binding protein	[more]
AT2G43970.2	4.8e-44	34.90	RNA-binding protein	[more]
AT5G46250.1	8.5e-41	35.14	RNA-binding protein	[more]
AT5G46250.3	7.0e-35	41.80	RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002344	Lupus La protein	PRINTS	PR00302	LUPUSLA	coord: 119..136 score: 33.33 coord: 254..272 score: 24.4 coord: 145..160 score: 28.41 coord: 176..189 score: 33.12 coord: 198..214 score: 22.99
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 205..288 e-value: 0.0077 score: 25.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 209..277 e-value: 8.7E-7 score: 28.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 204..292 score: 10.309022
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 110..190 e-value: 1.6E-30 score: 117.4
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 116..173 e-value: 3.3E-14 score: 52.7
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 106..197 score: 23.192558
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 196..297 e-value: 9.4E-12 score: 47.0
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 108..195 e-value: 3.9E-23 score: 83.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 302..323
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 386..424
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 1..414
None	No IPR available	PANTHER	PTHR22792:SF62	LA-RELATED PROTEIN 6C	coord: 1..414
IPR034878	Plant La-related protein, RNA recognition motif	CDD	cd12288	RRM_La_like_plant	coord: 204..290 e-value: 3.66756E-36 score: 126.093
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 106..193
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 190..299

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0290361.1	Cmc11g0290361.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding