Cmc11g0290341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0290341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 5272957 .. 5274114 (+)
RNA-Seq Expression	Cmc11g0290341
Synteny	Cmc11g0290341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGACGTGACCTTACTAGTGTTAGACATGCAGGATTTTGACGTGATTCTAGGCATGGATTGGCTGTCAGCCAACCATGCAAACATAGACTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCCCTCTGGGGCTAGTTTCAAATTTAAGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTAGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCCAGGACTTCCGCCTCCCAGGGAGGTAGACTTCGCCATCGACTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGTCGAGCTAAAAAAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCTGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAAAATCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGGTCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACGAGTTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGATTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGGAGACTCTTCGAGCCAACAACTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTCCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCGGTGGATCCAGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACAGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCAGTTGA

mRNA sequence

ATGTTAGACGTGACCTTACTAGTGTTAGACATGCAGGATTTTGACGTGATTCTAGGCATGGATTGGCTGTCAGCCAACCATGCAAACATAGACTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCCCTCTGGGGCTAGTTTCAAATTTAAGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTAGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCCAGGACTTCCGCCTCCCAGGGAGGTAGACTTCGCCATCGACTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGTCGAGCTAAAAAAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCTGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAAAATCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGGTCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACGAGTTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGATTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGGAGACTCTTCGAGCCAACAACTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTCCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCGGTGGATCCAGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACAGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCAGTTGA

Coding sequence (CDS)

ATGTTAGACGTGACCTTACTAGTGTTAGACATGCAGGATTTTGACGTGATTCTAGGCATGGATTGGCTGTCAGCCAACCATGCAAACATAGACTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCCCTCTGGGGCTAGTTTCAAATTTAAGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTAGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCCAGGACTTCCGCCTCCCAGGGAGGTAGACTTCGCCATCGACTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGTCGAGCTAAAAAAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCTGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAAAATCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGGTCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACGAGTTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGATTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGGAGACTCTTCGAGCCAACAACTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTCCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCGGTGGATCCAGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACAGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCAGTTGA

Protein sequence

MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFKGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIDLEPGTAPISRAPYRMAPVELKKLKVQLQELLDKGFIWPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTS

Homology

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BLAST of Cmc11g0290341 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 762.3 bits (1967), Expect = 2.0e-216
Identity = 377/384 (98.18%), Postives = 381/384 (99.22%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFKGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKF+GAGMVCIPKV
Sbjct: 435 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 494

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 495 ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 554

Query: 121 IDLEPGTAPISRAPYRMAPVELKKLKVQLQELLDKGFIWPSVSPWGAPVLFVKKKDGSMR 180
           I+LEPGTAPISRAPYRMAP ELK+LKVQLQELLDKGFI PSVSPWGAPVLFVKKKDGSMR
Sbjct: 555 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 614

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 615 LCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 674

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 675 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 734

Query: 301 QVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRAN LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR
Sbjct: 735 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 794

Query: 361 SFLGLAGYYRRFVEDFSRIASPLT 385
           SFLGLAGYYRRFVEDFSRIASPLT
Sbjct: 795 SFLGLAGYYRRFVEDFSRIASPLT 818

[Close]

BLAST of Cmc11g0290341 vs. NCBI nr
Match: KAA0025998.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 760.0 bits (1961), Expect = 1.0e-215
Identity = 376/384 (97.92%), Postives = 380/384 (98.96%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFKGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKF+GAGMVCIPKV
Sbjct: 463 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 522

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 523 ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 582

Query: 121 IDLEPGTAPISRAPYRMAPVELKKLKVQLQELLDKGFIWPSVSPWGAPVLFVKKKDGSMR 180
           I+LEPGTAPISRAPYRMAP ELK+LKVQLQELLDKGFI PSVSPWGAPVLFVKKKDGSMR
Sbjct: 583 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 642

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 643 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 702

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 703 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 762

Query: 301 QVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRAN LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIR
Sbjct: 763 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 822

Query: 361 SFLGLAGYYRRFVEDFSRIASPLT 385
           SFLGLAGYYRRFVEDFSRIASPLT
Sbjct: 823 SFLGLAGYYRRFVEDFSRIASPLT 846

[Close]

BLAST of Cmc11g0290341 vs. NCBI nr
Match: KAA0059723.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 759.6 bits (1960), Expect = 1.3e-215
Identity = 376/384 (97.92%), Postives = 379/384 (98.70%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFKGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKF+GAGMVCIPKV
Sbjct: 437 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 496

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 497 ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 556

Query: 121 IDLEPGTAPISRAPYRMAPVELKKLKVQLQELLDKGFIWPSVSPWGAPVLFVKKKDGSMR 180
           I+LEPGTAPISRAPYRMAP ELK+LKVQLQELLDKGFI PSVSPWGAPVLFVKKKDGSMR
Sbjct: 557 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 616

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 617 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 676

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            RYGHYEFVVMSFGLTN PAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 677 LRYGHYEFVVMSFGLTNTPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 736

Query: 301 QVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRAN LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR
Sbjct: 737 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 796

Query: 361 SFLGLAGYYRRFVEDFSRIASPLT 385
           SFLGLAGYYRRFVEDFSRIASPLT
Sbjct: 797 SFLGLAGYYRRFVEDFSRIASPLT 820

[Close]

BLAST of Cmc11g0290341 vs. NCBI nr
Match: KAA0032541.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 759.6 bits (1960), Expect = 1.3e-215
Identity = 375/384 (97.66%), Postives = 380/384 (98.96%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFKGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEV+FNPPSGASFKF+GAGMVCIPKV
Sbjct: 435 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVIFNPPSGASFKFRGAGMVCIPKV 494

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF 
Sbjct: 495 ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFP 554

Query: 121 IDLEPGTAPISRAPYRMAPVELKKLKVQLQELLDKGFIWPSVSPWGAPVLFVKKKDGSMR 180
           I+LEPGTAPISRAPYRMAP ELK+LKVQLQELLDKGFI PSVSPWGAPVLFVKKKDGSMR
Sbjct: 555 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 614

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 615 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 674

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHY+FVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 675 SRYGHYKFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 734

Query: 301 QVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRAN LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR
Sbjct: 735 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 794

Query: 361 SFLGLAGYYRRFVEDFSRIASPLT 385
           SFLGLAGYYRRFVEDFSRIASPLT
Sbjct: 795 SFLGLAGYYRRFVEDFSRIASPLT 818

[Close]

BLAST of Cmc11g0290341 vs. NCBI nr
Match: KAA0058812.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 758.8 bits (1958), Expect = 2.2e-215
Identity = 374/384 (97.40%), Postives = 380/384 (98.96%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFKGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKF+GAG+VCIPKV
Sbjct: 350 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGIVCIPKV 409

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 410 ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 469

Query: 121 IDLEPGTAPISRAPYRMAPVELKKLKVQLQELLDKGFIWPSVSPWGAPVLFVKKKDGSMR 180
           I+LEPGTAPISRAPYRMAP ELK+LKVQLQELLDKGFI PSVSPWGAPVLFVKKKDGSMR
Sbjct: 470 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 529

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAF 
Sbjct: 530 LCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFH 589

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDF+DSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 590 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFIDSFVIVFIDDILIYSKTEAEHEEHLH 649

Query: 301 QVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRAN LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR
Sbjct: 650 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 709

Query: 361 SFLGLAGYYRRFVEDFSRIASPLT 385
           SFLGLAGYYRRFVEDFSRIASPLT
Sbjct: 710 SFLGLAGYYRRFVEDFSRIASPLT 733

[Close]

BLAST of Cmc11g0290341 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 228.8 bits (582), Expect = 1.0e-58
Identity = 125/333 (37.54%), Postives = 192/333 (57.66%), Query Frame = 0


Query: 65  KASKLLSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 124
           +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 520 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 579

Query: 125 EVD-----FAIDLEPGTAPISRAPYRMAPVELKKLKVQLQELLDKGFIWPSVSPWGAPVL 184
           +++       I+++PG       PY +     +++   +Q+LLD  FI PS SP  +PV+
Sbjct: 580 DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 639

Query: 185 FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR 244
            V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ + 
Sbjct: 640 LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPME 699

Query: 245 DGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSK 304
             D  KTAF +  G YE+ VM FGL NAP+ F   M   F+D    FV V++DDILI+S+
Sbjct: 700 PKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSE 759

Query: 305 TEAEHEEHLHQVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW 364
           +  EH +HL  VLE L+  NL  K  KC+F   +  FLG+ +  + ++    K  A+ ++
Sbjct: 760 SPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 819

Query: 365 PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPL 384
           P P TV + + FLG+  YYRRF+ + S+IA P+
Sbjct: 820 PTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI 848

[Close]

BLAST of Cmc11g0290341 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 228.8 bits (582), Expect = 1.0e-58
Identity = 125/333 (37.54%), Postives = 192/333 (57.66%), Query Frame = 0


Query: 65  KASKLLSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 124
           +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 546 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 605

Query: 125 EVD-----FAIDLEPGTAPISRAPYRMAPVELKKLKVQLQELLDKGFIWPSVSPWGAPVL 184
           +++       I+++PG       PY +     +++   +Q+LLD  FI PS SP  +PV+
Sbjct: 606 DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 665

Query: 185 FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR 244
            V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ + 
Sbjct: 666 LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPME 725

Query: 245 DGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSK 304
             D  KTAF +  G YE+ VM FGL NAP+ F   M   F+D    FV V++DDILI+S+
Sbjct: 726 PKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSE 785

Query: 305 TEAEHEEHLHQVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW 364
           +  EH +HL  VLE L+  NL  K  KC+F   +  FLG+ +  + ++    K  A+ ++
Sbjct: 786 SPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 845

Query: 365 PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPL 384
           P P TV + + FLG+  YYRRF+ + S+IA P+
Sbjct: 846 PTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI 874

[Close]

BLAST of Cmc11g0290341 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.7e-56
Identity = 103/263 (39.16%), Postives = 165/263 (62.74%), Query Frame = 0


Query: 128 APISRAPYRMAPVELKKLKVQLQELLDKGFIWPSVSPWGAPVLFVKKKD-----GSMRLC 187
           +PI    Y +A     +++ Q+QE+L++G I  S SP+ +P   V KK         R+ 
Sbjct: 205 SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVV 264

Query: 188 IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSR 247
           IDYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G+HQ+ + +  I KTAF ++
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324

Query: 248 YGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQV 307
            GHYE++ M FGL NAPA F   MN + +  L+   +V++DDI+I+S +  EH   +  V
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLV 384

Query: 308 LETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSF 367
              L   NL  +  KCEF  ++  FLGH+V+ +G+  +P K++A+ ++P P+   EIR+F
Sbjct: 385 FTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAF 444

Query: 368 LGLAGYYRRFVEDFSRIASPLTS 386
           LGL GYYR+F+ +++ IA P+TS
Sbjct: 445 LGLTGYYRKFIPNYADIAKPMTS 467

[Close]

BLAST of Cmc11g0290341 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 4.9e-56
Identity = 102/247 (41.30%), Postives = 165/247 (66.80%), Query Frame = 0


Query: 143 KKLKVQLQELLDKGFIWPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRY 202
           ++++ Q+Q++L++G I  S SP+ +P+  V KK+D S     R+ IDYR+LN++TV +R+
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 203 PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTN 262
           P+P +D++  +L     F+ IDL  G+HQ+ +    + KTAF +++GHYE++ M FGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 263 APAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANNLYAKFSK 322
           APA F   MN + +  L+   +V++DDI+++S +  EH + L  V E L   NL  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 323 CEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFS 382
           CEF  ++ TFLGHV++ +G+  +P KIEA+  +P P+   EI++FLGL GYYR+F+ +F+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 383 RIASPLT 385
            IA P+T
Sbjct: 461 DIAKPMT 467

[Close]

BLAST of Cmc11g0290341 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 5.4e-55
Identity = 127/393 (32.32%), Postives = 213/393 (54.20%), Query Frame = 0


Query: 3   DVTLLVL-DMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFKGAGMVCIPKVI 62
           D+T  VL ++  FD I+G D L    A +D     ++  P  G          + +  ++
Sbjct: 19  DITFFVLPNLHSFDGIIGDDTLKDLKAIVDRKNNCLIITP--GIKIPLLARASINVNPLL 78

Query: 63  SAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAI 122
           +A         GT  IL S++                E+P +F   L G+     V+ A+
Sbjct: 79  AAEH-----PDGTQEILNSLLG---------------EFPRIFEPPLSGM----SVETAV 138

Query: 123 DLEPGT---APISRAPYRMAPVELK-KLKVQLQELLDKGFIWPSVSPWGAPVLFVKKK-- 182
             E  T    PI    Y   PV ++ +++ Q+ ELL  G I PS SP+ +P+  V KK  
Sbjct: 139 KAEIRTNTQDPIYAKSYPY-PVNMRGEVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPK 198

Query: 183 ---DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDG 242
              +   R+ +D++ LN VT+ + YP+P I+     L  A  F+ +DL SG+HQ+ +++ 
Sbjct: 199 PNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKES 258

Query: 243 DIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTE 302
           DIPKTAF +  G YEF+ + FGL NAPA+F  +++ + ++ +     V+IDDI+++S+  
Sbjct: 259 DIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDY 318

Query: 303 AEHEEHLHQVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPR 362
             H ++L  VL +L   NL     K  F   +V FLG++V+++G+  DP K+ A++  P 
Sbjct: 319 DTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPP 378

Query: 363 PSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTS 386
           P++V E++ FLG+  YYR+F++D++++A PLT+
Sbjct: 379 PTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTN 384

[Close]

BLAST of Cmc11g0290341 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 762.3 bits (1967), Expect = 9.7e-217
Identity = 377/384 (98.18%), Postives = 381/384 (99.22%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFKGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKF+GAGMVCIPKV
Sbjct: 435 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 494

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 495 ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 554

Query: 121 IDLEPGTAPISRAPYRMAPVELKKLKVQLQELLDKGFIWPSVSPWGAPVLFVKKKDGSMR 180
           I+LEPGTAPISRAPYRMAP ELK+LKVQLQELLDKGFI PSVSPWGAPVLFVKKKDGSMR
Sbjct: 555 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 614

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 615 LCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 674

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 675 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 734

Query: 301 QVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRAN LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR
Sbjct: 735 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 794

Query: 361 SFLGLAGYYRRFVEDFSRIASPLT 385
           SFLGLAGYYRRFVEDFSRIASPLT
Sbjct: 795 SFLGLAGYYRRFVEDFSRIASPLT 818

[Close]

BLAST of Cmc11g0290341 vs. ExPASy TrEMBL
Match: A0A5A7SIJ5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003210 PE=4 SV=1)

HSP 1 Score: 760.0 bits (1961), Expect = 4.8e-216
Identity = 376/384 (97.92%), Postives = 380/384 (98.96%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFKGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKF+GAGMVCIPKV
Sbjct: 463 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 522

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 523 ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 582

Query: 121 IDLEPGTAPISRAPYRMAPVELKKLKVQLQELLDKGFIWPSVSPWGAPVLFVKKKDGSMR 180
           I+LEPGTAPISRAPYRMAP ELK+LKVQLQELLDKGFI PSVSPWGAPVLFVKKKDGSMR
Sbjct: 583 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 642

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 643 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 702

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 703 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 762

Query: 301 QVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRAN LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIR
Sbjct: 763 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 822

Query: 361 SFLGLAGYYRRFVEDFSRIASPLT 385
           SFLGLAGYYRRFVEDFSRIASPLT
Sbjct: 823 SFLGLAGYYRRFVEDFSRIASPLT 846

[Close]

BLAST of Cmc11g0290341 vs. ExPASy TrEMBL
Match: A0A5A7SSL3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00540 PE=4 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 6.3e-216
Identity = 375/384 (97.66%), Postives = 380/384 (98.96%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFKGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEV+FNPPSGASFKF+GAGMVCIPKV
Sbjct: 435 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVIFNPPSGASFKFRGAGMVCIPKV 494

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDF 
Sbjct: 495 ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFP 554

Query: 121 IDLEPGTAPISRAPYRMAPVELKKLKVQLQELLDKGFIWPSVSPWGAPVLFVKKKDGSMR 180
           I+LEPGTAPISRAPYRMAP ELK+LKVQLQELLDKGFI PSVSPWGAPVLFVKKKDGSMR
Sbjct: 555 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 614

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 615 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 674

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHY+FVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 675 SRYGHYKFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 734

Query: 301 QVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRAN LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR
Sbjct: 735 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 794

Query: 361 SFLGLAGYYRRFVEDFSRIASPLT 385
           SFLGLAGYYRRFVEDFSRIASPLT
Sbjct: 795 SFLGLAGYYRRFVEDFSRIASPLT 818

[Close]

BLAST of Cmc11g0290341 vs. ExPASy TrEMBL
Match: A0A5A7UUX8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1395G00080 PE=4 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 6.3e-216
Identity = 376/384 (97.92%), Postives = 379/384 (98.70%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFKGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKF+GAGMVCIPKV
Sbjct: 437 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 496

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 497 ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 556

Query: 121 IDLEPGTAPISRAPYRMAPVELKKLKVQLQELLDKGFIWPSVSPWGAPVLFVKKKDGSMR 180
           I+LEPGTAPISRAPYRMAP ELK+LKVQLQELLDKGFI PSVSPWGAPVLFVKKKDGSMR
Sbjct: 557 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 616

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 617 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 676

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            RYGHYEFVVMSFGLTN PAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 677 LRYGHYEFVVMSFGLTNTPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 736

Query: 301 QVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRAN LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR
Sbjct: 737 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 796

Query: 361 SFLGLAGYYRRFVEDFSRIASPLT 385
           SFLGLAGYYRRFVEDFSRIASPLT
Sbjct: 797 SFLGLAGYYRRFVEDFSRIASPLT 820

[Close]

BLAST of Cmc11g0290341 vs. ExPASy TrEMBL
Match: A0A5A7USG7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002890 PE=4 SV=1)

HSP 1 Score: 758.8 bits (1958), Expect = 1.1e-215
Identity = 374/384 (97.40%), Postives = 380/384 (98.96%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFKGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKF+GAG+VCIPKV
Sbjct: 350 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGIVCIPKV 409

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 410 ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 469

Query: 121 IDLEPGTAPISRAPYRMAPVELKKLKVQLQELLDKGFIWPSVSPWGAPVLFVKKKDGSMR 180
           I+LEPGTAPISRAPYRMAP ELK+LKVQLQELLDKGFI PSVSPWGAPVLFVKKKDGSMR
Sbjct: 470 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 529

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAF 
Sbjct: 530 LCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFH 589

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDF+DSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 590 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFIDSFVIVFIDDILIYSKTEAEHEEHLH 649

Query: 301 QVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRAN LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR
Sbjct: 650 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 709

Query: 361 SFLGLAGYYRRFVEDFSRIASPLT 385
           SFLGLAGYYRRFVEDFSRIASPLT
Sbjct: 710 SFLGLAGYYRRFVEDFSRIASPLT 733

[Close]

BLAST of Cmc11g0290341 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 2.0e-20
Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 298 HLHQVLETLRANNLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRPST 357
           HL  VL+    +  YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 358 VSEIRSFLGLAGYYRRFVEDFSRIASPLT 385
            +E+R FLGL GYYRRFV+++ +I  PLT
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLT 91

The following BLAST results are available for this feature:

BLAST of Cmc11g0290341 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060745.1	2.0e-216	98.18	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025998.1	1.0e-215	97.92	pol protein [Cucumis melo var. makuwa]	[more]
KAA0059723.1	1.3e-215	97.92	pol protein [Cucumis melo var. makuwa]	[more]
KAA0032541.1	1.3e-215	97.66	pol protein [Cucumis melo var. makuwa]	[more]
KAA0058812.1	2.2e-215	97.40	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0290341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	1.0e-58	37.54	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.0e-58	37.54	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P20825	3.7e-56	39.16	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	4.9e-56	41.30	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	5.4e-55	32.32	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]

BLAST of Cmc11g0290341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4E4	9.7e-217	98.18	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]
A0A5A7SIJ5	4.8e-216	97.92	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34...	[more]
A0A5A7SSL3	6.3e-216	97.66	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46...	[more]
A0A5A7UUX8	6.3e-216	97.92	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7USG7	1.1e-215	97.40	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold33...	[more]

BLAST of Cmc11g0290341 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.0e-20	48.31	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF08284	RVP_2	coord: 4..42 e-value: 1.3E-12 score: 47.6
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 118..257 e-value: 1.8E-93 score: 313.7
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 129..384
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 129..384
None	No IPR available	CDD	cd01647	RT_LTR	coord: 156..332 e-value: 2.66897E-100 score: 292.962
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 342..385 e-value: 5.9E-17 score: 63.5
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 197..332 e-value: 1.8E-93 score: 313.7
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..49 e-value: 6.2E-8 score: 34.5
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 172..331 e-value: 1.9E-28 score: 99.5
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 153..332 score: 10.86402
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 96..384

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0290341.1	Cmc11g0290341.1	mRNA